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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066017 ID=TCONS_00066017|Name=TCONS_00066017|organism=Clytia hemisphaerica|type=transcript|length=1466bp
CTTCGAAACCGGGAATAAGAATCAAAACAGTATCGAACAATCCGTTTATA
ACAAAATATTCTACTACTATTAAATCTTCGTTtccaaaaaagataaaatt
atcaaaaaaaaaaaaaaaacagaaaaacaacGTAATAACCAAGATATATG
AATGACGaatttacaaaacaaaaaatactgaTGATGAAAATCCTAAAAGG
CTACTGTAAGAGAGGTCGATCCTCGctttaaaatttcagaaatcAAAATC
TACTTTAGATTCATTTATTTCCTTCACTCTATGTATATATcggaaaataa
tttgaattccCGAAATCAAATGGTCACGAAGAAAATTCACTTCGAATATt
cgtgaaaataaatttgtgaaTTTCTTCTGCAATCTCATCCTGGCTGATCG
TGGCATTATTAGTTTCTTCGTACCTTAGCTttcaaattcattaaaaaaac
taACTCATTAAAGGACACCCTATATATNAATACAATAAATAGTCTATCAG
ACTTCAGAGATGGCTGagtaatgatgacgtcatcaaaaatttcacaGAGC
acattttttctaagaaaactgTAGGTATGTTAGTAGTATTATCGAAaatt
tttgtatcaaaatcccagttttatattcaatttaaaatattttgtcctTC
TTTTAGAAATTGTGATTTTTCTTCAGGCGAAAGGTTTATTCTAAGGCTTT
TCCTGAAATGAACAAATGTTGTCGTTTGTGAGGGGGcttaatttcatact
cagtgtgtctcaagctttttgagatttttgttgttatttttcgCAAGGTT
TTAAATGCTAAACATGGCATTTACAAGTGAAGCCCAAGGTGGAATTTGGG
GCTTAGAAACAAAAGATCACTTGTTATAGAACAATATAAATTTATAGGTA
TAAGAGGATTGATCactcccccggggggggggggggggNAAGGTAAGTTC
AACGAGTGGATTTCGgtttcattgatttttgacgATGTAAGCATATCCCA
ATCTTTAGTCTATTTCACTTTGCATTCTGTTtgtcattataaaaaatatc
ataacaaAATTTCACAAAGAATATGATATACTTATTCAGGAGAAGATGTG
TGAATCTCTTTGAGTTATACAATGATCTGATATTTTGTATAAAAGAATGT
CAAGAAAGATAATAATACCCTAATTGTTAATTTCGCATCTCGTTCAATCA
GTATTCGGGAACACTATATTCTGTTTTCACAGGTTGCGAAGGTGGTACCC
CAAACGGTTGCTCGGGTACACCAAATGGCTGTGACTGATACGACTGTTGG
GCGGACTCATCTTCGCCAGGGTGTGGGAATGAGGCATAGGGTGACTTATT
GTATCCACCCTGGTTGGCAGTGTTGTAATCACCGCCCGATGCAGGTTGTT
GATGTGTGCGTTCGAATCCATCGCCTTGGCGGTAACGTTGGTATGCCATG
AGTGATAGTGCAATct Run BLAST on NCBI transcript from alignment at scaffold_448:294344..295809 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066017 ID=TCONS_00066017|Name=TCONS_00066017|organism=Clytia hemisphaerica|type=transcript|length=1466bp|location=Sequence derived from alignment at scaffold_448:294344..295809 (Clytia hemisphaerica)
agATTGCACTATCACTCATGGCATACCAACGTTACCGCCAAGGCGATGGA
TTCGAACGCACACATCAACAACCTGCATCGGGCGGTGATTACAACACTGC
CAACCAGGGTGGATACAATAAGTCACCCTATGCCTCATTCCCACACCCTG
GCGAAGATGAGTCCGCCCAACAGTCGTATCAGTCACAGCCATTTGGTGTA
CCCGAGCAACCGTTTGGGGTACCACCTTCGCAACCTGTGAAAACAGAATA
TAGTGTTCCCGAATACTGATTGAACGAGATGCGAAATTAACAATTAGGGT
ATTATTATCTTTCTTGACATTCTTTTATACAAAATATCAGATCATTGTAT
AACTCAAAGAGATTCACACATCTTCTCCTGAATAAGTATATCATATTCTT
TGTGAAATTttgttatgatattttttataatgacaAACAGAATGCAAAGT
GAAATAGACTAAAGATTGGGATATGCTTACATcgtcaaaaatcaatgaaa
cCGAAATCCACTCGTTGAACTTACCTTNccccccccccccccccggggga
gtGATCAATCCTCTTATACCTATAAATTTATATTGTTCTATAACAAGTGA
TCTTTTGTTTCTAAGCCCCAAATTCCACCTTGGGCTTCACTTGTAAATGC
CATGTTTAGCATTTAAAACCTTGcgaaaaataacaacaaaaatctcaaaa
agcttgagacacactgagtatgaaattaagCCCCCTCACAAACGACAACA
TTTGTTCATTTCAGGAAAAGCCTTAGAATAAACCTTTCGCCTGAAGAAAA
ATCACAATTTCTAAAAGAaggacaaaatattttaaattgaatataaaact
gggattttgatacaaaaattTTCGATAATACTACTAACATACCTAcagtt
ttcttagaaaaaatgtGCTCtgtgaaatttttgatgacgtcatcattact
CAGCCATCTCTGAAGTCTGATAGACTATTTATTGTATTNATATATAGGGT
GTCCTTTAATGAGTtagtttttttaatgaatttgaaAGCTAAGGTACGAA
GAAACTAATAATGCCACGATCAGCCAGGATGAGATTGCAGAAGAAAttca
caaatttattttcacgaATATTCGAAGTGAATTTTCTTCGTGACCATTTG
ATTTCGggaattcaaattattttccgATATATACATAGAGTGAAGGAAAT
AAATGAATCTAAAGTAGATTTTgatttctgaaattttaaagCGAGGATCG
ACCTCTCTTACAGTAGCCTTTTAGGATTTTCATCAtcagtattttttgtt
ttgtaaattCGTCATTCATATATCTTGGTTATTACgttgtttttctgttt
tttttttttttttgataattttatcttttttggaAACGAAGATTTAATAG
TAGTAGAATATTTTGTTATAAACGGATTGTTCGATACTGTTTTGATTCTT
ATTCCCGGTTTCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066017-exon-scaffold_448-1491911889:294344..295809 | TCONS_00066017-exon-scaffold_448-1491911889:294344..295809 | Clytia hemisphaerica | exon |
| TCONS_00066017-exon-scaffold_448-1510915933:294344..295809 | TCONS_00066017-exon-scaffold_448-1510915933:294344..295809 | Clytia hemisphaerica | exon |
| TCONS_00066017-exon-scaffold_448-1575043694:294344..295809 | TCONS_00066017-exon-scaffold_448-1575043694:294344..295809 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:294344..295809 . |
Blast
The following BLAST results are available for this feature:
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