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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066035 ID=TCONS_00066035|Name=TCONS_00066035|organism=Clytia hemisphaerica|type=transcript|length=2157bp
GCTTTTAGATAAAaggttttaataaaaatgactcGATTAATTCAAGGAgg
gaaaataaaaacagacaATTTTCGCTTGCTCGCTTGAACAAACCTTTAAA
GTTTCGTTTTTAAAGTTTAGCATACGGAGAATCAACCAGCACCTTTGTTG
GTTGTAATCGATATTAACGCACAATGTCAACTaaggaaaaaggaaaacaa
aaagcTAGCAAGGCACAGCAGGCGGCTGAAGCTCTTTCAAAAGAAGTTCT
ATCAAAAGGTTTTCTTGCCAAGAGTCTGTCCGAAATTGAAGATGTTGACG
AAAGCAAATCACCATATGTGGTGTTTGTGGGCAATGTTGGTGTTGGAAAG
TCGACTGTAACAGAAAAGTTAACTGGAGAAGTAGGCCGAAGCTCAGCATC
AAGTTCCAGTAGTACGACTACAGCAGAGTACTTTTGGGTGGCGGACAAAA
GTCTTCTGATAGCAGATACGCCAGGAAGTAATCCCCGTGTTAGCCAGAAA
TTTGATCACAACCTTGAAATTGCTGCAGCTTTGAATTATAGGAATGTCTC
CAAACTGTTGATTGTTGTTAAAGCTTCAGTAAGGATGGATCAAACACTGG
CCGATATTAACGAGTATGTTAACAGGTTTGTCGCTCTGCCTGATGATCTT
GTAGGAGTTCTTGTCACACACATGGATACCAAGATCGAATGGAAAGAAGA
AGATTTGAGGAAAGCGTGCGAGGAAGACTTTGGTATCGAGGATATCGTTT
TTTCTCACCAAAATATGCCAGGAAAGTTCATTCAAACAcgtattttgaaa
gtttgtaaTGGAGAACCATTTAAGCTAGATATTGACGGTCGATTATTTTT
ACGACTATTCAATATTCAGggaaacaaaaagaaagttcTCAAATTCACCA
ATGACATTGTGGATAGATTCAAGCAGTATAAGCAATGTTTTGAAGacgaa
agaaagaaatttagtCCTGAAGAACAAGCAGATCTTTTTTTTGAGTATAA
AGCCTTTATGGAATTGCAAGTAGATGAGTCTCGAAAAGAATTATGCCAAA
AACTTGGTATTGACTTCTGTCACGAGGATGATAAGGTCAATATTCAGCAT
GCAGGATATGTAGCAAACATGGTCAACCAACTTCGTGCTGTTATCTTTGA
TATTCGTATTGAAGCATTGAAATATCATAATAACCATGGTTGCAGTGATC
TACGGGAATGTCCAGTCTGTGGTTGTGTTTGGGCCAAAGTTGAAGGTTGT
GATGGATGGACGACATGTGGATCAATACCCACCACTGTTAGCGATGTCAA
TCGTGATGTTTTTGAGATGGCAACATTCAACTTTAAAGTGGTCCAAGTTA
ACCAAAATGAAGTCAAATTCGAAATCATGTCTAatggaaagaaaaatatc
aaaatggatGGATTGAATGCTACAATTGATGCTGCGTTCGATGAAGCAAT
TGCCAAGATGGATCTCTCAGAATTTCAAGTAATAGGAGATAAAGTATTCA
TGAATGTCCCAAAAGAATGTTCAAACTTGTATCAAGGTACAAAGGGATGT
CATCAGGTCATTCATTGGGACTACATGAAAAAGGTAGAAGCACCAGGTGA
ATTTCACGTCAAAGATGAAACTCAACATGTTAATGTTGATGATATAATGA
CTTTGCCAAAGGAAGCAAAAAGTGTTTTCGATGTTATCGATCGACAGTTG
AAAGCTAAGAGAAAgaattgatttttgtttttgattgtaaaaaaaattct
ttttgaatatttcaaaatacagTGTGCAAGGAACACAAAAGTGGAGTGAG
ATTTCAGATTTCAAGTTTGAATCAATTATTGTAATAAGATCATTGACATA
AATTTTCTTTACTcccgggtacctaatagccggggcccgctaattaattt
ttgagattttttccaacctccctgcttattccaacccccgactattaggt
acccgagagtacataTAAATTGCGAATACAAATTTCGTTGTTCCAGGCCC
AAACTGTATGATAAATAAGATTTATTAATATCCAAAAAATCCTTATAGTA
CCCgttgtattttttcatttgataatAATAAGTTACCTTGTAATTAAGCA
aattttttcacgtttttttctataaaaagaaagtatttaagaacacgagg
cttcgAG Run BLAST on NCBI protein sequence of TCONS_00066035-protein >TCONS_00066035-protein ID=TCONS_00066035-protein|Name=TCONS_00066035-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
MSTKEKGKQKASKAQQAAEALSKEVLSKGFLAKSLSEIEDVDESKSPYVV
FVGNVGVGKSTVTEKLTGEVGRSSASSSSSTTTAEYFWVADKSLLIADTP
GSNPRVSQKFDHNLEIAAALNYRNVSKLLIVVKASVRMDQTLADINEYVN
RFVALPDDLVGVLVTHMDTKIEWKEEDLRKACEEDFGIEDIVFSHQNMPG
KFIQTRILKVCNGEPFKLDIDGRLFLRLFNIQGNKKKVLKFTNDIVDRFK
QYKQCFEDERKKFSPEEQADLFFEYKAFMELQVDESRKELCQKLGIDFCH
EDDKVNIQHAGYVANMVNQLRAVIFDIRIEALKYHNNHGCSDLRECPVCG
CVWAKVEGCDGWTTCGSIPTTVSDVNRDVFEMATFNFKVVQVNQNEVKFE
IMSNGKKNIKMDGLNATIDAAFDEAIAKMDLSEFQVIGDKVFMNVPKECS
NLYQGTKGCHQVIHWDYMKKVEAPGEFHVKDETQHVNVDDIMTLPKEAKS
VFDVIDRQLKAKRKN Run BLAST on NCBI transcript from alignment at scaffold_449:27130..30253+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066035 ID=TCONS_00066035|Name=TCONS_00066035|organism=Clytia hemisphaerica|type=transcript|length=3124bp|location=Sequence derived from alignment at scaffold_449:27130..30253+ (Clytia hemisphaerica)
GCTTTTAGATAAAaggttttaataaaaatgactcGATTAATTCAAGGAgg
gaaaataaaaacagacaATTTTCGCTTGCTCGCTTGAACAAACCTTTAAA
GTTTCGTTTTTAAAGTTTAGCATACGGAGAATCAACCAGCACCTTTGTTG
GTTGTAATCGATATTAACGCACAATGTCAACTaaggaaaaaggaaaacaa
aaagcTAGCAAGGCACAGCAGGCGGCTGAAGCTCTTTCAAAAGAAGTTCT
ATCAAAAGGTTTTCTTGCCAGTGAGTAAATTTTattagacacccctgtct
cagagaACTGGTTGTGAGCAGTTGCTTGTGGGCGGGGTAACAGTACTTCG
AGGGTAGGCATTAATCTTTTAAATCAACCCTTACGGCGTGCTTTTCTTTG
AAGCTTTTTTAAGGCAAGAAAATGAACAGATTTTCCAAAATGCTCCCCAA
AAACTTCGTATTTCTGaatttttacacccttagagtttACTTTCTCTCGT
TTtgacccttgcagtgcattttgggaagcCTGGAAAACGCGCGGTTAATA
ATTAagacaaaacttattttttcaaagttttctacATTTTTAGAGAGTCT
GTCCGAAATTGAAGATGTTGACGAAAGCAAATCACCATATGTGGTGTTTG
TGGGCAATGTTGGTGTTGGAAAGTCGACTGTAACAGAAAAGTTAACTGGA
GAAGTAGGCCGAAGCTCAGCATCAAGTTCCAGTAGTACGACTACAGCAGA
GTACTTTTGGGTGGCGGACAAAAGTCTTCTGATAGCAGATACGCCAGGAA
GTAATCCCCGTGTTAGCCAGAAATTTGATCACAACCTTGAAATTGCTGCA
GCTTTGAATTATAGGAATGTCTCCAAACTGTTGATTGTTGTTAAAGCTTC
AGTAAGGATGGATCAAACACTGGCCGATATTAACGAGTATGTTAACNTGA
ACTGGTTGTGAGCAGTTGCTTGTGGGCGGGGTAACAGTACTTCGAGGGTA
GGCATTAGTCTTTTAAATCAACCCTTACGGCGTGCTTTTCTTTGAAGCTT
TTTTAAGGCAAGAAAATGAAcagattttccaaaatgttgCCCAAAAACTT
CGTATTTCTGaatttttacacccttagagtttACTTTCTCTCGTTTtgac
ccttgcagtgcattttgggaagcCTGGAAAACGCGCGGTTAATAATTAag
acaaaacttattttttcaaagttttctacATTTTTAGAGAGTCTGTCCGA
AATTGAAGATGTTGACGAAAGCAAATCACCATATGTGGTGTTTGTGGGCA
ATGTTGGTGTTGGAAAGTCGACTGTAACAGAAAAGTTAACTGGAGAAGTA
GGCCGAAGCTCAGCATCAAGTTCCAGTAGTACGACTACAGCAGAGTACTT
TTGGGTGGCGGACAAAAGTCTTCTGATAGCAGATACGCCAGGAAGTAATC
CCCGTGTTAGCCAGAAATTTGATCACAACCTTGAAATTGCTGCAGCTTTG
AATTATAGGAATGTCTCCAAACTGTTGATTGTTGTTAAAGCTTCAGTAAG
GATGGATCAAACACTGGCCGATATTAACGAGTATGTTAACAGGTTTGTCG
CTCTGCCTGATGATCTTGTAGGAGTTCTTGTCACACACATGGATACCAAG
ATCGAATGGAAAGAAGAAGATTTGAGGAAAGCGTGCGAGGAAGACTTTGG
TATCGAGGATATCGTTTTTTCTCACCAAAATATGCCAGGAAAGTTCATTC
AAACAcgtattttgaaagtttgtaaTGGAGAACCATTTAAGCTAGATATT
GACGGTCGATTATTTTTACGACTATTCAATATTCAGggaaacaaaaagaa
agttcTCAAATTCACCAATGACATTGTGGATAGATTCAAGCAGTATAAGC
AATGTTTTGAAGacgaaagaaagaaatttagtCCTGAAGAACAAGCAGAT
CTTTTTTTTGAGTATAAAGCCTTTATGGAATTGCAAGTAGATGAGTCTCG
AAAAGAATTATGCCAAAAACTTGGTATTGACTTCTGTCACGAGGATGATA
AGGTCAATATTCAGCATGCAGGATATGTAGCAAACATGGTCAACCAACTT
CGTGCTGTTATCTTTGATATTCGTATTGAAGCATTGAAATATCATAATAA
CCATGGTTGCAGTGATCTACGGGAATGTCCAGTCTGTGGTTGTGTTTGGG
CCAAAGTTGAAGGTTGTGATGGATGGACGACATGTGGATCAATACCCACC
ACTGTTAGCGATGTCAATCGTGATGTTTTTGAGATGGCAACATTCAACTT
TAAAGTGGTCCAAGTTAACCAAAATGAAGTCAAATTCGAAATCATGTCTA
atggaaagaaaaatatcaaaatggatGGATTGAATGCTACAATTGATGCT
GCGTTCGATGAAGCAATTGCCAAGATGGATCTCTCAGAATTTCAAGTAAT
AGGAGATAAAGTATTCATGAATGTCCCAAAAGAATGTTCAAACTTGTATC
AAGGTACAAAGGGATGTCATCAGGTCATTCATTGGGACTACATGAAAAAG
GTAGAAGCACCAGGTGAATTTCACGTCAAAGATGAAACTCAACATGTTAA
TGTTGATGATATAATGACTTTGCCAAAGGAAGCAAAAAGTGTTTTCGATG
TTATCGATCGACAGTTGAAAGCTAAGAGAAAgaattgatttttgtttttg
attgtaaaaaaaattctttttgaatatttcaaaatacagTGTGCAAGGAA
CACAAAAGTGGAGTGAGATTTCAGATTTCAAGTTTGAATCAATTATTGTA
ATAAGATCATTGACATAAATTTTCTTTACTcccgggtacctaatagccgg
ggcccgctaattaatttttgagattttttccaacctccctgcttattcca
acccccgactattaggtacccgagagtacataTAAATTGCGAATACAAAT
TTCGTTGTTCCAGGCCCAAACTGTATGATAAATAAGATTTATTAATATCC
AAAAAATCCTTATAGTACCCgttgtattttttcatttgataatAATAAGT
TACCTTGTAATTAAGCAaattttttcacgtttttttctataaaaagaaag
tatttaagaacacgaggcttcgAG Coding sequence (CDS) from alignment at scaffold_449:27130..30253+ >TCONS_00066035 ID=TCONS_00066035|Name=TCONS_00066035|organism=Clytia hemisphaerica|type=CDS|length=3096bp|location=Sequence derived from alignment at scaffold_449:27130..30253+ (Clytia hemisphaerica)
ATGTCAACTaaggaaaaaggaaaacaaaaagcTAGCAAGGCACAGCAGGC
GGCTGAAGCTCTTTCAAAAGAAGTTCTATCAAAAGGTTTTCTTGCCAAGA
GTCTGTCCGAAATTGAAGATGTTGACGAAAGCAAATCACCATATGTGGTG
TTTGTGGGCAATGTTGGTGTTGGAAAGTCGACTGTAACAGAAAAGTTAAC
TGGAGAAGTAGGCCGAAGCTCAGCATCAAGTTCCAGTAGTACGACTACAG
CAGAGTACTTTTGGGTGGCGGACAAAAGTCTTCTGATAGCAGATACGCCA
GGAAGTAATCCCCGTGTTAGCCAGAAATTTGATCACAACCTTGAAATTGC
TGCAGCTTTGAATTATAGGAATGTCTCCAAACTGTTGATTGTTGTTAAAG
CTTCAGTAAGGATGGATCAAACACTGGCCGATATTAACGAGTATGTTAAC
AGGTTTGTCGCTCTGCCTGATGATCTTGTAGGAGTTCTTGTCACACACAT
GGATACCAAGATCGAATGGAAAGAAGAAGATTTGAGGAAAGCGTGCGAGG
AAGACTTTGGTATCGAGGATATCGTTTTTTCTCACCAAAATATGCCAGGA
AAGTTCATTCAAACAcgtattttgaaagtttgtaaTGGAGAACCATTTAA
GCTAGATATTGACGGTCGATTATTTTTACGACTATTCAATATTCAGggaa
acaaaaagaaagttcTCAAATTCACCAATGACATTGTGGATAGATTCAAG
CAGTATAAGCAATGTTTTGAAGacgaaagaaagaaatttagtCCTGAAGA
ACAAGCAGATCTTTTTTTTGAGTATAAAGCCTTTATGGAATTGCAAGTAG
ATGAGTCTCGAAAAGAATTATGCCAAAAACTTGGTATTGACTTCTGTCAC
GAGGATGATAAGGTCAATATTCAGCATGCAGGATATGTAGCAAACATGGT
CAACCAACTTCGTGCTGTTATCTTTGATATTCGTATTGAAGCATTGAAAT
ATCATAATAACCATGGTTGCAGTGATCTACGGGAATGTCCAGTCTGTGGT
TGTGTTTGGGCCAAAGTTGAAGGTTGTGATGGATGGACGACATGTGGATC
AATACCCACCACTGTTAGCGATGTCAATCGTGATGTTTTTGAGATGGCAA
CATTCAACTTTAAAGTGGTCCAAGTTAACCAAAATGAAGTCAAATTCGAA
ATCATGTCTAatggaaagaaaaatatcaaaatggatGGATTGAATGCTAC
AATTGATGCTGCGTTCGATGAAGCAATTGCCAAGATGGATCTCTCAGAAT
TTCAAGTAATAGGAGATAAAGTATTCATGAATGTCCCAAAAGAATGTTCA
AACTTGTATCAAGGTACAAAGGGATGTCATCAGGTCATTCATTGGGACTA
CATGAAAAAGGTAGAAGCACCAGGTGAATTTCACGTCAAAGATGAAACTC
AACATGTTAATGTTGATGATATAATGACTTTGCCAAAGGAAGCAAAAAGT
GTTTTCGATGTTATCGATCGACAGTTGAAAGCTAAGAGAAAgaattgaAT
GTCAACTaaggaaaaaggaaaacaaaaagcTAGCAAGGCACAGCAGGCGG
CTGAAGCTCTTTCAAAAGAAGTTCTATCAAAAGGTTTTCTTGCCAAGAGT
CTGTCCGAAATTGAAGATGTTGACGAAAGCAAATCACCATATGTGGTGTT
TGTGGGCAATGTTGGTGTTGGAAAGTCGACTGTAACAGAAAAGTTAACTG
GAGAAGTAGGCCGAAGCTCAGCATCAAGTTCCAGTAGTACGACTACAGCA
GAGTACTTTTGGGTGGCGGACAAAAGTCTTCTGATAGCAGATACGCCAGG
AAGTAATCCCCGTGTTAGCCAGAAATTTGATCACAACCTTGAAATTGCTG
CAGCTTTGAATTATAGGAATGTCTCCAAACTGTTGATTGTTGTTAAAGCT
TCAGTAAGGATGGATCAAACACTGGCCGATATTAACGAGTATGTTAACAG
GTTTGTCGCTCTGCCTGATGATCTTGTAGGAGTTCTTGTCACACACATGG
ATACCAAGATCGAATGGAAAGAAGAAGATTTGAGGAAAGCGTGCGAGGAA
GACTTTGGTATCGAGGATATCGTTTTTTCTCACCAAAATATGCCAGGAAA
GTTCATTCAAACAcgtattttgaaagtttgtaaTGGAGAACCATTTAAGC
TAGATATTGACGGTCGATTATTTTTACGACTATTCAATATTCAGggaaac
aaaaagaaagttcTCAAATTCACCAATGACATTGTGGATAGATTCAAGCA
GTATAAGCAATGTTTTGAAGacgaaagaaagaaatttagtCCTGAAGAAC
AAGCAGATCTTTTTTTTGAGTATAAAGCCTTTATGGAATTGCAAGTAGAT
GAGTCTCGAAAAGAATTATGCCAAAAACTTGGTATTGACTTCTGTCACGA
GGATGATAAGGTCAATATTCAGCATGCAGGATATGTAGCAAACATGGTCA
ACCAACTTCGTGCTGTTATCTTTGATATTCGTATTGAAGCATTGAAATAT
CATAATAACCATGGTTGCAGTGATCTACGGGAATGTCCAGTCTGTGGTTG
TGTTTGGGCCAAAGTTGAAGGTTGTGATGGATGGACGACATGTGGATCAA
TACCCACCACTGTTAGCGATGTCAATCGTGATGTTTTTGAGATGGCAACA
TTCAACTTTAAAGTGGTCCAAGTTAACCAAAATGAAGTCAAATTCGAAAT
CATGTCTAatggaaagaaaaatatcaaaatggatGGATTGAATGCTACAA
TTGATGCTGCGTTCGATGAAGCAATTGCCAAGATGGATCTCTCAGAATTT
CAAGTAATAGGAGATAAAGTATTCATGAATGTCCCAAAAGAATGTTCAAA
CTTGTATCAAGGTACAAAGGGATGTCATCAGGTCATTCATTGGGACTACA
TGAAAAAGGTAGAAGCACCAGGTGAATTTCACGTCAAAGATGAAACTCAA
CATGTTAATGTTGATGATATAATGACTTTGCCAAAGGAAGCAAAAAGTGT
TTTCGATGTTATCGATCGACAGTTGAAAGCTAAGAGAAAgaattga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066035-exon-scaffold_449-1491911889:27130..27399 | TCONS_00066035-exon-scaffold_449-1491911889:27130..27399 | Clytia hemisphaerica | exon |
| TCONS_00066035-exon-scaffold_449-1510915933:27130..27399 | TCONS_00066035-exon-scaffold_449-1510915933:27130..27399 | Clytia hemisphaerica | exon |
| TCONS_00066035-exon-scaffold_449-1575043694:27130..27399 | TCONS_00066035-exon-scaffold_449-1575043694:27130..27399 | Clytia hemisphaerica | exon |
| TCONS_00066035-exon-scaffold_449-1491911889:28367..30253 | TCONS_00066035-exon-scaffold_449-1491911889:28367..30253 | Clytia hemisphaerica | exon |
| TCONS_00066035-exon-scaffold_449-1510915933:28367..30253 | TCONS_00066035-exon-scaffold_449-1510915933:28367..30253 | Clytia hemisphaerica | exon |
| TCONS_00066035-exon-scaffold_449-1575043694:28367..30253 | TCONS_00066035-exon-scaffold_449-1575043694:28367..30253 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_449 | supercontig | scaffold_449:27130..30253 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
The following BLAST results are available for this feature:
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