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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066036 ID=TCONS_00066036|Name=TCONS_00066036|organism=Clytia hemisphaerica|type=transcript|length=606bp
gttttaataaaaatgactcGATTAATTCAAGGAgggaaaataaaaacaga
caATTTTCGCTTGCTCGCTTGAACAAACCTTTAAAGTTTCGTTTTTAAAG
TTTAGCATACGGAGAATCAACCAGCACCTTTGTTGGTTGTAATCGATATT
AACGCACAATGTCAACTaaggaaaaaggaaaacaaaaagcTAGCAAGGCA
CAGCAGGCGGCTGAAGCTCTTTCAAAAGAAGTTCTATCAAAAGGTTTTCT
TGCCAAGAGTCTGTCCGAAATTGAAGATGTTGACGAAAGCAAATCACCAT
ATGTGGTGTTTGTGGGCAATGTTGGTGTTGGAAAGTCGACTGTAACAGAA
AAGTTAACTGGAGAAGTAGGCCGAAGCTCAGCATCAAGTTCCAGTAGTAC
GACTACAGCAGAGTACTTTTGGGTGGCGGACAAAAGTCTTCTGATAGCAG
ATACGCCAGGAAGTAATCCCCGTGTTAGCCAGAAATTTGATCACAACCTT
GAAATTGCTGCAGCTTTGAATTATAGGAATGTCTCCAAACTGTTGATTGT
TGTTAAAGCTTCAGTAAGGATGGATCAAACACTGGCCGATATTAACGAGT
ATGTTA Run BLAST on NCBI transcript from alignment at scaffold_449:27145..28073+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066036 ID=TCONS_00066036|Name=TCONS_00066036|organism=Clytia hemisphaerica|type=transcript|length=929bp|location=Sequence derived from alignment at scaffold_449:27145..28073+ (Clytia hemisphaerica)
gttttaataaaaatgactcGATTAATTCAAGGAgggaaaataaaaacaga
caATTTTCGCTTGCTCGCTTGAACAAACCTTTAAAGTTTCGTTTTTAAAG
TTTAGCATACGGAGAATCAACCAGCACCTTTGTTGGTTGTAATCGATATT
AACGCACAATGTCAACTaaggaaaaaggaaaacaaaaagcTAGCAAGGCA
CAGCAGGCGGCTGAAGCTCTTTCAAAAGAAGTTCTATCAAAAGGTTTTCT
TGCCAGTGAGTAAATTTTattagacacccctgtctcagagaACTGGTTGT
GAGCAGTTGCTTGTGGGCGGGGTAACAGTACTTCGAGGGTAGGCATTAAT
CTTTTAAATCAACCCTTACGGCGTGCTTTTCTTTGAAGCTTTTTTAAGGC
AAGAAAATGAACAGATTTTCCAAAATGCTCCCCAAAAACTTCGTATTTCT
GaatttttacacccttagagtttACTTTCTCTCGTTTtgacccttgcagt
gcattttgggaagcCTGGAAAACGCGCGGTTAATAATTAagacaaaactt
attttttcaaagttttctacATTTTTAGAGAGTCTGTCCGAAATTGAAGA
TGTTGACGAAAGCAAATCACCATATGTGGTGTTTGTGGGCAATGTTGGTG
TTGGAAAGTCGACTGTAACAGAAAAGTTAACTGGAGAAGTAGGCCGAAGC
TCAGCATCAAGTTCCAGTAGTACGACTACAGCAGAGTACTTTTGGGTGGC
GGACAAAAGTCTTCTGATAGCAGATACGCCAGGAAGTAATCCCCGTGTTA
GCCAGAAATTTGATCACAACCTTGAAATTGCTGCAGCTTTGAATTATAGG
AATGTCTCCAAACTGTTGATTGTTGTTAAAGCTTCAGTAAGGATGGATCA
AACACTGGCCGATATTAACGAGTATGTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066036-exon-scaffold_449-1491911889:27145..27399 | TCONS_00066036-exon-scaffold_449-1491911889:27145..27399 | Clytia hemisphaerica | exon |
| TCONS_00066036-exon-scaffold_449-1510915933:27145..27399 | TCONS_00066036-exon-scaffold_449-1510915933:27145..27399 | Clytia hemisphaerica | exon |
| TCONS_00066036-exon-scaffold_449-1575043694:27145..27399 | TCONS_00066036-exon-scaffold_449-1575043694:27145..27399 | Clytia hemisphaerica | exon |
| TCONS_00066036-exon-scaffold_449-1491911889:27723..28073 | TCONS_00066036-exon-scaffold_449-1491911889:27723..28073 | Clytia hemisphaerica | exon |
| TCONS_00066036-exon-scaffold_449-1510915933:27723..28073 | TCONS_00066036-exon-scaffold_449-1510915933:27723..28073 | Clytia hemisphaerica | exon |
| TCONS_00066036-exon-scaffold_449-1575043694:27723..28073 | TCONS_00066036-exon-scaffold_449-1575043694:27723..28073 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_449 | supercontig | scaffold_449:27145..28073 + |
Blast
The following BLAST results are available for this feature:
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