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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066037 ID=TCONS_00066037|Name=TCONS_00066037|organism=Clytia hemisphaerica|type=transcript|length=2984bp
aaaaaaacgaaattaataaaaataccTTTTGGAAAGAGTTTTTATCTCGG
AACATTCTGCATTAAGGTTtcaatatttaaataaaaactgAAATAAAGAT
AATCTTACATAATTGATAAACTTACAATTACGGTGTTGTTTTTTACAGCC
TAATCACGTACTTTAATTTGCTCGCTCACTCACTCACtggggggggaggg
gtacttaggcaagtgaagggtacgTGCGAGTGCCGCCCTTAAAGATGTCT
TTTTGAAACCTGggcagtccctgtaagggttgaaagaaaaattgaaaaac
tattACCCTGTAAACCCAGCACCCCCTCACCCCTGGGACTCACTCAATCA
CTTTACTCAAGAgtataaaaaaatccaatgtGACCTTTAACTTAAATCGC
TATAATTATGATAATTCATTAATTTTACATATTTAAACATATTCGATGTT
TTGTTCTTTTGGCTGTTTTGGGATGAGGTGATCGTGCTTCTTATACTCTC
TGTTCTTATCTCCAAAGCATGTCTTGAATACGTGCTCGTTAATTCTTTGT
AGGATTTTAACAGTAACAAAAAACGTGGGAATGCAATATCTaatgctttt
gaaacttttgtaaaaatgtcttttcaaaaGGTGGCGTATACTCCTTTCAT
TCGGCTCTTTGAGCAGTAAGGTGGTGTCTGGCTCACTTTTGTAATCTGCA
CTTGATATAGCTTGGGTTATCTCTCCTGGTTGATTTGGATCGGTAGATTT
CTGCATTGAGGCTGAATGTGAGGTTTTTCCTCGATTTCTCTCTTTATGTC
CCCCCTTAGCTGGATTCTTTAACTTTTCAGGATGTGACGGTTTGTCTTCT
CTTACTCGTTGGTATTGGTAACCTCCTTTTGGAGGCGTATGTGTAGGATA
GGGTACTGTGCCATCATCTTCTGGTTTGTCCTTTGGTGGGTACTTCTTCG
ATCTATTGTTTTGGTTTGAGTCGTTGTTTGATCTGCCTCTTTCACCTTTG
CTGGGTTGTGAAGATTGATTCAGAGTCTCTTGTGGATAGTCCTTTGGTGG
ATATTTCCTCGACTTATTGTTTTGGTTTGAGTCGTTGTTTGAAATACCTC
TTTCACCTTTGCTGGGTTGTGTAAATTGGTTCAGAGTCTCTTCTGGATAG
TCATATGGGTGGTATTTCGCCGACTTATTGTTTTGGTTTGAGTCGTTGTT
TGGTTTCTGTCTTTCACCTTTGTTGGGTTGTGTAAATTGGTTCAGAGTCT
CTTCTGGATAGTCATATGGGTGGTATTTCGCCGACTTATTGTTTTGGTTT
GAGTCGTTGTTTGGTTTCTGTCTTCCACCTTTGTTGGGTTGTGAAGATTG
ATTCGGAGCCTCTTCTGAATAGTCATATGGGTGGTACTTCGCCGACTTat
tattttggttaaagtcgTTGTTTGATCTCTGTCTTCCACCTTTGTTGGGT
TGTGAAGATTGATTCGGAGCCTCTTCTGAATAGTCATATGGGTGGTACTT
CGCCGACTTATTGTTTTGGTTAAAGTCGTTGTTTGATCTCTGTCTTCCAC
CTTTGTTGGGTTGTGAAGATTGATTCGGAGCCTCTTCTTTTTGGTGTACA
TATCTGGGTGGTTCTGTATGAGTATGCTTTGTAGGATTCTTCTTTGGTAG
AGATCTACCATGATTGATGCGTTGTGTGTCACTTGTACTTAATGGCTGTT
GATTTTTGGGCTTGGTCTTTTGTCTGCTTTTTGTATCTGCGTGATGGTCA
GATTTAGGTTGTTCCACTGGACGCTGATTAGATTCAGGTTGTTTTACTGG
ACCCTGATTTTGTATCTGtgtgattttttgatgattAACTTTCATCATTT
CATTCCAGCTGATTTTTTGACCACATCCTGTCTTGTTATCCTGAAATTGA
CcaccaaaactttttttctgtatTTCGACTTTTCTGTAGTCAATGATTTT
AAATGTAAAATGTGCCATTGTACATGGAGAATTTGTTGACAGCTCAATAC
GCTTTGGTTTACCACATGTTTGAGCTTTTGGATTTTCACAAATCCTACCG
CAATGAGGGCAATTTTTGGTGGATGCATAGGGATCTTGATTTCGAGCGAT
TCGAATTTGTATGTCATTCATTGCGGCGTTAGTTTGATTGACCATGTTCA
TCAGATAGCCTTCCTCCATATCTTTCGTCTCCCtctcaaaattgaaattc
aattcaTTTACCATGTCCTGTTTTGCTGTTTCGGTAAGATGTGTTTTGAA
CAGTGCCCAGAACTCGCAATCAAGATGACACCGATCTGCTTCATCGAAGT
TCTTTCTCTGACcctcaaaactttttttgagtGATTTAAATCGTTTAACG
AAGTCATTTGtgacttttagaatttttcgaTTACTATCCTTAAACCTGAA
AAGTCTTGAAAACAGGTCACTCTGCATATCTATTACAAAAGTTTTTCTGC
ATGTTCTTAAAACATCTTTGCAAAGGTCGAAACCCTTTTTTTGGCGATCT
GAGAAAACGACGTCTGTAATTTCGAAGTCCTCGTCAATAGCTTCCAATAT
TTCTTCCTCATCCCATTCTTTGTGGAGATCCATATGAGTCACCAAAACAC
CGACAAGATCTTCAGGGAGAGCATTAAATCGATCATAATACTGCTTTATA
TCATCCAGTGTCTGGTCCATACGTAGACTTGCTTTCACAACTACTATGAA
TTTGGAAACCTCTCGATAACTCAATGCAGCTGCAATCTCATTATTATGTT
CCAGTTTATCCTTTCGAGGATTGGTTCCTGGAGTGTCAGCAATGAGAAGA
CTTTGATCAGGAGTCAAGAAATATTCAGCAGATCTGGTTGCACTGGATGC
TGATGAAGAGCTTCGACCATCAACACCTGCTAGTTTTTCAACGATGGTTG
ATTTCCCACTTCCTACATTGCCAACCAATACGATGTATGGTGCTTTATCG
CTATCAACTTCTTTTACGCTGGAGCCATTGTTTT Run BLAST on NCBI transcript from alignment at scaffold_449:35669..38720+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066037 ID=TCONS_00066037|Name=TCONS_00066037|organism=Clytia hemisphaerica|type=transcript|length=3052bp|location=Sequence derived from alignment at scaffold_449:35669..38720+ (Clytia hemisphaerica)
aaaaaaacgaaattaataaaaataccTTTTGGAAAGAGTTTTTATCTCGG
AACATTCTGCATTAAGGTTtcaatatttaaataaaaactgAAATAAAGAT
AATCTTACATAATTGATAAACTTACAATTACGGTGTTGTTTTTTACAGCC
TAATCACGTACTTTAATTTGCTCGCTCACTCACTCACtggggggggaggg
gtacttaggcaagtgaagggtacgTGCGAGTGCCGCCCTTAAAGATGTCT
TTTTGAAACCTGggcagtccctgtaagggttgaaagaaaaattgaaaaac
tattACCCTGTAAACCCAGCACCCCCTCACCCCTGGGACTCACTCAATCA
CTTTACTCAAGAgtataaaaaaatccaatgtGACCTTTAACTTAAATCGC
TATAATTATGATAATTCATTAATTTTACATATTTAAACATATTCGATGTT
TTGTTCTTTTGGCTGTTTTGGGATGAGGTGATCGTGCTTCTTATACTCTC
TGTTCTTATCTCCAAAGCATGTCTTGAATACGTGCTCGTTAATTCTTTGT
AGGATTTTAACAGTAACAAAAAACGTGGGAATGCAATATCTaatgctttt
gaaacttttgtaaaaatgtcttttcaaaaGGTGGCGTATACTCCTTTCAT
TCGGCTCTTTGAGCAGTAAGGTGGTGTCTGGCTCACTTTTGTAATCTGCA
CTTGATATAGCTTGGGTTATCTCTCCTGGTTGATTTGGATCGGTAGATTT
CTGCATTGAGGCTGAATGTGAGGTTTTTCCTCGATTTCTCTCTTTATGTC
CCCCCTTAGCTGGATTCTTTAACTTTTCAGGATGTGACGGTTTGTCTTCT
CTTACTCGTTGGTATTGGTAACCTCCTTTTGGAGGCGTATGTGTAGGNTA
TGTGACGGTTTATCTTCTCTTACTCGTTGGTATTGGTAACCTCCTTTTGG
AGGCGTATGTGTAGGATAGGGTACTGTGCCATCATCTTCTGGTTTGTCCT
TTGGTGGGTACTTCTTCGATCTATTGTTTTGGTTTGAGTCGTTGTTTGAT
CTGCCTCTTTCACCTTTGCTGGGTTGTGAAGATTGATTCAGAGTCTCTTG
TGGATAGTCCTTTGGTGGATATTTCCTCGACTTATTGTTTTGGTTTGAGT
CGTTGTTTGAAATACCTCTTTCACCTTTGCTGGGTTGTGTAAATTGGTTC
AGAGTCTCTTCTGGATAGTCATATGGGTGGTATTTCGCCGACTTATTGTT
TTGGTTTGAGTCGTTGTTTGGTTTCTGTCTTTCACCTTTGTTGGGTTGTG
TAAATTGGTTCAGAGTCTCTTCTGGATAGTCATATGGGTGGTATTTCGCC
GACTTATTGTTTTGGTTTGAGTCGTTGTTTGGTTTCTGTCTTCCACCTTT
GTTGGGTTGTGAAGATTGATTCGGAGCCTCTTCTGAATAGTCATATGGGT
GGTACTTCGCCGACTTattattttggttaaagtcgTTGTTTGATCTCTGT
CTTCCACCTTTGTTGGGTTGTGAAGATTGATTCGGAGCCTCTTCTGAATA
GTCATATGGGTGGTACTTCGCCGACTTATTGTTTTGGTTAAAGTCGTTGT
TTGATCTCTGTCTTCCACCTTTGTTGGGTTGTGAAGATTGATTCGGAGCC
TCTTCTTTTTGGTGTACATATCTGGGTGGTTCTGTATGAGTATGCTTTGT
AGGATTCTTCTTTGGTAGAGATCTACCATGATTGATGCGTTGTGTGTCAC
TTGTACTTAATGGCTGTTGATTTTTGGGCTTGGTCTTTTGTCTGCTTTTT
GTATCTGCGTGATGGTCAGATTTAGGTTGTTCCACTGGACGCTGATTAGA
TTCAGGTTGTTTTACTGGACCCTGATTTTGTATCTGtgtgattttttgat
gattAACTTTCATCATTTCATTCCAGCTGATTTTTTGACCACATCCTGTC
TTGTTATCCTGAAATTGACcaccaaaactttttttctgtatTTCGACTTT
TCTGTAGTCAATGATTTTAAATGTAAAATGTGCCATTGTACATGGAGAAT
TTGTTGACAGCTCAATACGCTTTGGTTTACCACATGTTTGAGCTTTTGGA
TTTTCACAAATCCTACCGCAATGAGGGCAATTTTTGGTGGATGCATAGGG
ATCTTGATTTCGAGCGATTCGAATTTGTATGTCATTCATTGCGGCGTTAG
TTTGATTGACCATGTTCATCAGATAGCCTTCCTCCATATCTTTCGTCTCC
CtctcaaaattgaaattcaattcaTTTACCATGTCCTGTTTTGCTGTTTC
GGTAAGATGTGTTTTGAACAGTGCCCAGAACTCGCAATCAAGATGACACC
GATCTGCTTCATCGAAGTTCTTTCTCTGACcctcaaaactttttttgagt
GATTTAAATCGTTTAACGAAGTCATTTGtgacttttagaatttttcgaTT
ACTATCCTTAAACCTGAAAAGTCTTGAAAACAGGTCACTCTGCATATCTA
TTACAAAAGTTTTTCTGCATGTTCTTAAAACATCTTTGCAAAGGTCGAAA
CCCTTTTTTTGGCGATCTGAGAAAACGACGTCTGTAATTTCGAAGTCCTC
GTCAATAGCTTCCAATATTTCTTCCTCATCCCATTCTTTGTGGAGATCCA
TATGAGTCACCAAAACACCGACAAGATCTTCAGGGAGAGCATTAAATCGA
TCATAATACTGCTTTATATCATCCAGTGTCTGGTCCATACGTAGACTTGC
TTTCACAACTACTATGAATTTGGAAACCTCTCGATAACTCAATGCAGCTG
CAATCTCATTATTATGTTCCAGTTTATCCTTTCGAGGATTGGTTCCTGGA
GTGTCAGCAATGAGAAGACTTTGATCAGGAGTCAAGAAATATTCAGCAGA
TCTGGTTGCACTGGATGCTGATGAAGAGCTTCGACCATCAACACCTGCTA
GTTTTTCAACGATGGTTGATTTCCCACTTCCTACATTGCCAACCAATACG
ATGTATGGTGCTTTATCGCTATCAACTTCTTTTACGCTGGAGCCATTGTT
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066037-exon-scaffold_449-1491911889:35669..36552 | TCONS_00066037-exon-scaffold_449-1491911889:35669..36552 | Clytia hemisphaerica | exon |
| TCONS_00066037-exon-scaffold_449-1510915933:35669..36552 | TCONS_00066037-exon-scaffold_449-1510915933:35669..36552 | Clytia hemisphaerica | exon |
| TCONS_00066037-exon-scaffold_449-1575043694:35669..36552 | TCONS_00066037-exon-scaffold_449-1575043694:35669..36552 | Clytia hemisphaerica | exon |
| TCONS_00066037-exon-scaffold_449-1491911889:36621..38720 | TCONS_00066037-exon-scaffold_449-1491911889:36621..38720 | Clytia hemisphaerica | exon |
| TCONS_00066037-exon-scaffold_449-1510915933:36621..38720 | TCONS_00066037-exon-scaffold_449-1510915933:36621..38720 | Clytia hemisphaerica | exon |
| TCONS_00066037-exon-scaffold_449-1575043694:36621..38720 | TCONS_00066037-exon-scaffold_449-1575043694:36621..38720 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_449 | supercontig | scaffold_449:35669..38720 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
The following BLAST results are available for this feature:
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