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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066040 ID=TCONS_00066040|Name=TCONS_00066040|organism=Clytia hemisphaerica|type=transcript|length=1908bp
CTTTTGATAGAACTTCTTTTGAAAGAGCTTCAGCCGCCTGCTGTGCCTTG
CTAgctttttgttttcctttttccttAGTTGACATTGTGCGTTAATATCG
ATTACAACCAACAAAGGTGCTGGTTGATTCTCCGTATGCTAAACTTTAAA
AACGAAACTTTAAAGGTTTGTTCAAGCGAGCAAGCGAAAATtgtctgttt
ttattttcccTCCTTGAATTAATCgagtcatttttattaaaacctTTTAT
CTAAAAGCTCTTTAAGCAATCTcgacttttaaaaataaaaatagctttaa
atgAAAAGCAATTTAGACGACTTAAAATTCTAAAGCAGCAATATAAAGCC
GCAATCGCGTATGAAATCTGACTATACTTCCTACTATTACATTATATTTA
AACAAGGAGATACCATCGAATTTGGAATGCAAAATCTCATGACTCATTGT
ACCAGTATTAGTAGATCAAACCTGGAAACttgacaaaaaaacaagcaCTA
AAATGATCAACATTTTGAAAGAGAAAGCTATTGAGAACGACAACTCAAAG
ATCGAAAATGTCGAAAGTGACAAACCACCGTATGTTATTCTGGTCGGAAA
CGTGGGTACTGGAAAGTCTACAATTGTTGAAAAGTTGACAGGTGTCAAAG
GACGAAGTTCATCAACATCAGAGAGTTTTACAAGAGAATCAAAGCAGTTT
AAAACACCTGATGGGAGTCTCCATATAGCCGATACACCTGGTTCTAACCC
TCGCAGTGAAAGATTTCAGCAAAATCAAGCAATTGCTTCGGCATTTGCTT
ATCAAGAAATCTCAAAAGTTTTAATCGTTGTAAGAGCAGATGTTCGAATG
GACCAGACACTTGCTGATGTTAAGGATTATAATGACCGATTTATTGAACT
CCCTGAAGATCTAGTTGGCGTTTTAGTGACTCATATGGATCTTCACAAAG
AATGGACAGAGAAAGACTTCTCAGTAGCATGCAATGAGGATTTCGAGATT
AAAGATGTCATCTTTTCTAGTGTTGAAACTTCTCAAAGTGAGATTCAAGA
AACAATATTAAAAATCTGTAGAACATCATATTCCATTGAGATTGGAAGCA
GCTTATTTTCGAAATTGTTTAAAACTGAAAACAGCAAATTTAAAGTATTA
AAAGTCAGCAAACAATTAATTAAACATACCAAGGACTTGATGGTCAGTTT
TGAGCAACAGAGACAACAATTTACTAAACGTGAAGATAAGAGGAATTTAA
TATTCGAGTTTAGGGCATGGTTTGAAGTATATTGGAAAAGATCGTTGTTA
AATCAAGCTATACATTTATTGGACCCTCAATTCAAGGAAATACCAACAGA
CCTAAAACAAGGTTATTTGACAAACATATCCAATGAAATGGATagttgca
ttgaaaaaataaacatgCGAATCGACCGTTACAACAATAAGGTAAGGGAT
GGTACTGCTCGAGCTTGCCCTTTTTGCGGAAAGCTTTGGGAAAGCATGGT
TAAAGTATGCGGTAATTCAAACTCAAATACTACTTGTCTTGAATGTACAC
AGTTTGAAATGAAGACATTTActttttcaatacaaaatagACATCAGTTG
TCTATTTTAAAAAATCCTGCAAATGAAGAATTCAAAAGCCGGAGAGAAAT
GGTCGGATGTGGTCGACAGCTCACATGGAATGATATGAAAATTGTTTCAA
CAATTTCAAATAATCAAGAATCACTTCCAAAAGACGAAGCTGGTCCATCG
AGAAAACAGTCTTCAACTGCTAATTGGAATGCGGAAATAGATAAGGACTC
TGAAAAAGATTCAATGGAATCACTATCAAAAAATGATATGAAAATTCGTT
CAATAATTTTAAAAGGTCAAGAATCACTTCCAAAAGACGAAGCTGGGCCT
TCGAGAAA Run BLAST on NCBI protein sequence of TCONS_00066040-protein >TCONS_00066040-protein ID=TCONS_00066040-protein|Name=TCONS_00066040-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
MINILKEKAIENDNSKIENVESDKPPYVILVGNVGTGKSTIVEKLTGVKG
RSSSTSESFTRESKQFKTPDGSLHIADTPGSNPRSERFQQNQAIASAFAY
QEISKVLIVVRADVRMDQTLADVKDYNDRFIELPEDLVGVLVTHMDLHKE
WTEKDFSVACNEDFEIKDVIFSSVETSQSEIQETILKICRTSYSIEIGSS
LFSKLFKTENSKFKVLKVSKQLIKHTKDLMVSFEQQRQQFTKREDKRNLI
FEFRAWFEVYWKRSLLNQAIHLLDPQFKEIPTDLKQGYLTNISNEMDSCI
EKINMRIDRYNNKVRDGTARACPFCGKLWESMVKVCGNSNSNTTCLECTQ
FEMKTFTFSIQNRHQLSILKNPANEEFKSRREMVGCGRQLTWNDMKIVST
ISNNQESLPKDEAGPSRKQSSTANWNAEIDKDSEKDSMESLSKNDMKIRS
IILKGQESLPKDEAGPSR Run BLAST on NCBI transcript from alignment at scaffold_449:25070..27387- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066040 ID=TCONS_00066040|Name=TCONS_00066040|organism=Clytia hemisphaerica|type=transcript|length=2318bp|location=Sequence derived from alignment at scaffold_449:25070..27387- (Clytia hemisphaerica)
CTTTTGATAGAACTTCTTTTGAAAGAGCTTCAGCCGCCTGCTGTGCCTTG
CTAGCTTTTTGTTTTCCTTTTTCCTTAGTTGACATTGTGCGTTAATATCG
ATTACAACCAACAAAGGTGCTGGTTGATTCTCCGTATGCTAAACTTTAAA
AACGAAACTTTAAAGGTTTGTTCAAGCGAGCAAGCGAAAATTGTCTGTTT
TTATTTTCCCTCCTTGAATTAATCGAGTCATTTTTATTAAAACCTTTTAT
CTAAAAGCTCTTTAAGCAATCTCGACTTTTAAAAATAAAAATAGCTTTAA
ATGAAAAGCAATTTAGACGACTTAAAATTCTAAAGCAGCAATATAAAGCC
GCAATCGCGTATGAAATCTGACTATACTTCCTACTATTACATTATATTTA
AACAAGGAGATACCATCGAATTTGGAATGCAAAATCTCATGACTCATTGT
ACCAGTATTAGTAGATCAAACCTGGAAACTTGACAAAAAAACAAGCACTA
AAATGATCAACATTTTGAAAGAGAAAGCTATTGGTAAGTCAACTAAGAGA
CCTTTGATACATGAGGGTATGGCCGAGAAACATGCTGATGAAAAAAATGT
TTGCTAAACAGTTTTCTATTGATTGATTATAGATTGAATTAAAGGTTTTC
ATCTTACATAGGTGTTTTTGTTTCATATCAGACACATATTTCATATCAGG
ACAGTGTCTTGCTATTGTTATGTTATGATGATATGAGCAAAAAAAGAAGT
TTTCTTTTCCTCTTTCTGACCAATCTTGCTCCACATCTGTGTCAATCCAA
TGTGAAAAAGCTTGTAAATTAAAATTGATGAGTAAGCAAACGATATCAAT
CTTATTTAAAAACAAAACCTCTAAACTATAAATTCGAGCTTTAAATATAG
AGGAAAAATTGTTTTTGAAAGACTTTCTTTCTTTTATTGTTAGAGAACGA
CAACTCAAAGATCGAAAATGTCGAAAGTGACAAACCACCGTATGTTATTC
TGGTCGGAAACGTGGGTACTGGAAAGTCTACAATTGTTGAAAAGTTGACA
GGTGTCAAAGGACGAAGTTCATCAACATCAGAGAGTTTTACAAGAGAATC
AAAGCAGTTTAAAACACCTGATGGGAGTCTCCATATAGCCGATACACCTG
GTTCTAACCCTCGCAGTGAAAGATTTCAGCAAAATCAAGCAATTGCTTCG
GCATTTGCTTATCAAGAAATCTCAAAAGTTTTAATCGTTGTAAGAGCAGA
TGTTCGAATGGACCAGACACTTGCTGATGTTAAGGATTATAATGACCGAT
TTATTGAACTCCCTGAAGATCTAGTTGGCGTTTTAGTGACTCATATGGAT
CTTCACAAAGAATGGACAGAGAAAGACTTCTCAGTAGCATGCAATGAGGA
TTTCGAGATTAAAGATGTCATCTTTTCTAGTGTTGAAACTTCTCAAAGTG
AGATTCAAGAAACAATATTAAAAATCTGTAGAACATCATATTCCATTGAG
ATTGGAAGCAGCTTATTTTCGAAATTGTTTAAAACTGAAAACAGCAAATT
TAAAGTATTAAAAGTCAGCAAACAATTAATTAAACATACCAAGGACTTGA
TGGTCAGTTTTGAGCAACAGAGACAACAATTTACTAAACGTGAAGATAAG
AGGAATTTAATATTCGAGTTTAGGGCATGGTTTGAAGTATATTGGAAAAG
ATCGTTGTTAAATCAAGCTATACATTTATTGGACCCTCAATTCAAGGAAA
TACCAACAGACCTAAAACAAGGTTATTTGACAAACATATCCAATGAAATG
GATAGTTGCATTGAAAAAATAAACATGCGAATCGACCGTTACAACAATAA
GGTAAGGGATGGTACTGCTCGAGCTTGCCCTTTTTGCGGAAAGCTTTGGG
AAAGCATGGTTAAAGTATGCGGTAATTCAAACTCAAATACTACTTGTCTT
GAATGTACACAGTTTGAAATGAAGACATTTACTTTTTCAATACAAAATAG
ACATCAGTTGTCTATTTTAAAAAATCCTGCAAATGAAGAATTCAAAAGCC
GGAGAGAAATGGTCGGATGTGGTCGACAGCTCACATGGAATGATATGAAA
ATTGTTTCAACAATTTCAAATAATCAAGAATCACTTCCAAAAGACGAAGC
TGGTCCATCGAGAAAACAGTCTTCAACTGCTAATTGGAATGCGGAAATAG
ATAAGGACTCTGAAAAAGATTCAATGGAATCACTATCAAAAAATGATATG
AAAATTCGTTCAATAATTTTAAAAGGTCAAGAATCACTTCCAAAAGACGA
AGCTGGGCCTTCGAGAAA Coding sequence (CDS) from alignment at scaffold_449:25070..27387- >TCONS_00066040 ID=TCONS_00066040|Name=TCONS_00066040|organism=Clytia hemisphaerica|type=CDS|length=2808bp|location=Sequence derived from alignment at scaffold_449:25070..27387- (Clytia hemisphaerica)
AGAACGACAACTCAAAGATCGAAAATGTCGAAAGTGACAAACCACCGTAT
GTTATTCTGGTCGGAAACGTGGGTACTGGAAAGTCTACAATTGTTGAAAA
GTTGACAGGTGTCAAAGGACGAAGTTCATCAACATCAGAGAGTTTTACAA
GAGAATCAAAGCAGTTTAAAACACCTGATGGGAGTCTCCATATAGCCGAT
ACACCTGGTTCTAACCCTCGCAGTGAAAGATTTCAGCAAAATCAAGCAAT
TGCTTCGGCATTTGCTTATCAAGAAATCTCAAAAGTTTTAATCGTTGTAA
GAGCAGATGTTCGAATGGACCAGACACTTGCTGATGTTAAGGATTATAAT
GACCGATTTATTGAACTCCCTGAAGATCTAGTTGGCGTTTTAGTGACTCA
TATGGATCTTCACAAAGAATGGACAGAGAAAGACTTCTCAGTAGCATGCA
ATGAGGATTTCGAGATTAAAGATGTCATCTTTTCTAGTGTTGAAACTTCT
CAAAGTGAGATTCAAGAAACAATATTAAAAATCTGTAGAACATCATATTC
CATTGAGATTGGAAGCAGCTTATTTTCGAAATTGTTTAAAACTGAAAACA
GCAAATTTAAAGTATTAAAAGTCAGCAAACAATTAATTAAACATACCAAG
GACTTGATGGTCAGTTTTGAGCAACAGAGACAACAATTTACTAAACGTGA
AGATAAGAGGAATTTAATATTCGAGTTTAGGGCATGGTTTGAAGTATATT
GGAAAAGATCGTTGTTAAATCAAGCTATACATTTATTGGACCCTCAATTC
AAGGAAATACCAACAGACCTAAAACAAGGTTATTTGACAAACATATCCAA
TGAAATGGATAGTTGCATTGAAAAAATAAACATGCGAATCGACCGTTACA
ACAATAAGGTAAGGGATGGTACTGCTCGAGCTTGCCCTTTTTGCGGAAAG
CTTTGGGAAAGCATGGTTAAAGTATGCGGTAATTCAAACTCAAATACTAC
TTGTCTTGAATGTACACAGTTTGAAATGAAGACATTTACTTTTTCAATAC
AAAATAGACATCAGTTGTCTATTTTAAAAAATCCTGCAAATGAAGAATTC
AAAAGCCGGAGAGAAATGGTCGGATGTGGTCGACAGCTCACATGGAATGA
TATGAAAATTGTTTCAACAATTTCAAATAATCAAGAATCACTTCCAAAAG
ACGAAGCTGGTCCATCGAGAAAACAGTCTTCAACTGCTAATTGGAATGCG
GAAATAGATAAGGACTCTGAAAAAGATTCAATGGAATCACTATCAAAAAA
TGATATGAAAATTCGTTCAATAATTTTAAAAGGTCAAGAATCACTTCCAA
AAGACGAAGCTGGGCCTTCGAGAATGATCAACATTTTGAAAGAGAAAGCT
ATTGAGAACGACAACTCAAAGATCGAAAATGTCGAAAGTGACAAACCACC
GTATGTTATTCTGGTCGGAAACGTGGGTACTGGAAAGTCTACAATTGTTG
AAAAGTTGACAGGTGTCAAAGGACGAAGTTCATCAACATCAGAGAGTTTT
ACAAGAGAATCAAAGCAGTTTAAAACACCTGATGGGAGTCTCCATATAGC
CGATACACCTGGTTCTAACCCTCGCAGTGAAAGATTTCAGCAAAATCAAG
CAATTGCTTCGGCATTTGCTTATCAAGAAATCTCAAAAGTTTTAATCGTT
GTAAGAGCAGATGTTCGAATGGACCAGACACTTGCTGATGTTAAGGATTA
TAATGACCGATTTATTGAACTCCCTGAAGATCTAGTTGGCGTTTTAGTGA
CTCATATGGATCTTCACAAAGAATGGACAGAGAAAGACTTCTCAGTAGCA
TGCAATGAGGATTTCGAGATTAAAGATGTCATCTTTTCTAGTGTTGAAAC
TTCTCAAAGTGAGATTCAAGAAACAATATTAAAAATCTGTAGAACATCAT
ATTCCATTGAGATTGGAAGCAGCTTATTTTCGAAATTGTTTAAAACTGAA
AACAGCAAATTTAAAGTATTAAAAGTCAGCAAACAATTAATTAAACATAC
CAAGGACTTGATGGTCAGTTTTGAGCAACAGAGACAACAATTTACTAAAC
GTGAAGATAAGAGGAATTTAATATTCGAGTTTAGGGCATGGTTTGAAGTA
TATTGGAAAAGATCGTTGTTAAATCAAGCTATACATTTATTGGACCCTCA
ATTCAAGGAAATACCAACAGACCTAAAACAAGGTTATTTGACAAACATAT
CCAATGAAATGGATAGTTGCATTGAAAAAATAAACATGCGAATCGACCGT
TACAACAATAAGGTAAGGGATGGTACTGCTCGAGCTTGCCCTTTTTGCGG
AAAGCTTTGGGAAAGCATGGTTAAAGTATGCGGTAATTCAAACTCAAATA
CTACTTGTCTTGAATGTACACAGTTTGAAATGAAGACATTTACTTTTTCA
ATACAAAATAGACATCAGTTGTCTATTTTAAAAAATCCTGCAAATGAAGA
ATTCAAAAGCCGGAGAGAAATGGTCGGATGTGGTCGACAGCTCACATGGA
ATGATATGAAAATTGTTTCAACAATTTCAAATAATCAAGAATCACTTCCA
AAAGACGAAGCTGGTCCATCGAGAAAACAGTCTTCAACTGCTAATTGGAA
TGCGGAAATAGATAAGGACTCTGAAAAAGATTCAATGGAATCACTATCAA
AAAATGATATGAAAATTCGTTCAATAATTTTAAAAGGTCAAGAATCACTT
CCAAAAGACGAAGCTGGGCCTTCGAGAATGATCAACATTTTGAAAGAGAA
AGCTATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066040-exon-scaffold_449-1575043694:26855..27387 | TCONS_00066040-exon-scaffold_449-1575043694:26855..27387 | Clytia hemisphaerica | exon |
| TCONS_00066040-exon-scaffold_449-1575043694:25070..26444 | TCONS_00066040-exon-scaffold_449-1575043694:25070..26444 | Clytia hemisphaerica | exon |
| TCONS_00066040-exon-scaffold_449-1510915933:26855..27387 | TCONS_00066040-exon-scaffold_449-1510915933:26855..27387 | Clytia hemisphaerica | exon |
| TCONS_00066040-exon-scaffold_449-1510915933:25070..26444 | TCONS_00066040-exon-scaffold_449-1510915933:25070..26444 | Clytia hemisphaerica | exon |
| TCONS_00066040-exon-scaffold_449-1491911889:26855..27387 | TCONS_00066040-exon-scaffold_449-1491911889:26855..27387 | Clytia hemisphaerica | exon |
| TCONS_00066040-exon-scaffold_449-1491911889:25070..26444 | TCONS_00066040-exon-scaffold_449-1491911889:25070..26444 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_449 | supercontig | scaffold_449:25070..27387 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
The following BLAST results are available for this feature:
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