TCONS_00066214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066214
Unique NameTCONS_00066214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1427

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066214 ID=TCONS_00066214|Name=TCONS_00066214|organism=Clytia hemisphaerica|type=transcript|length=1427bp
AAAAATGGAAAGCTTAAAAATATATAGGAGAAGAAAATCATCAACATTGC
TCTTACAGAGAGGTGTGTGGATGCTCTCTCGATTGAAACTTTGATAGACT
TGGAAGAATTGATATTGAAGGGAAACCACGAATAACCAAACAAGATGTCG
GCCATTATGATTTCATACCAATGGGATAGCCAACCAGAAGCAATCCGAAT
CAAAGATGCTCTAGAAGCTGATGGATATGACGTTTGGATGGATTTGGATG
ATATGAGGGGAAATATTTACCAAAAGATGGCTGAAGGTGTTGAGAATGCT
GCTGTGATTCTAGTATGCATGTCAACCAAATATGAAAATTCGGTCAATTG
TAATCGAGAATTGCAATTTTCTCAAGACAAACGAAAACAACTGATTCCCA
TCATGATCGAAGCTGGATACAGACCAGGTGGTGCTCTTGGTTTGATCATT
GCTGGTCTTAAATATGTCGACTTCAGCAACCCTGGTGATTTTGACGATAA
GATGGTGGAACTTAGAGATGAAATTACTCATTACTGCAAACCAACACTAC
AGCCAACGGAATCTGCTCCAAAAGCCGCTTCGGAAACAGCCACAACAGgt
gatTATAACATGAAGCTTGGAGTTGTGGAAGCCAGAGCCGAGTCTTGGGA
TGGTGCTGCGACTGCATTAGTGGATAAATTGAGGAGCCGTAAACTGAAAC
GCGGTCAAGTAGTATCTGTCTCCGCTCACAATAATGGTAAAAACGAGAAT
GCCATTTTCTCAGCTTTCTATGATATTAATGCCCCTGGTCAAGGAGATTT
GGAGATTCATTTTGATTCACAGAACTCATCCTCTTCATGGTCAACTATTT
ACCAGACAGCCTGTGAACAAGCTGCTACAGTTAAGTTGAATGATATTATT
GGTATATCTGGCTCTTGCAATATGGATCGTGCTGTTTTTTATGTATTCTC
ACAAGTTCCAAGTCCTGTATCCGATTCCGCTACAGTTGAATACGTTGAAA
GCAGAGCAGATACTTGGGAAGAAGCTGCAGATGGAATTATAGGCCAATTA
GAAGCAAACGGTGTCTCAAATGGTCAAGTCTTAAACATAGATGCTCACAA
CAACGGTGAAGGAGAAGCTGCCATCTTTAGTGCTCACTACAGCAAAGATC
TTCCTGGCAAAGGTCCATTGTCAATCTCATACAAGGCACATAATGGAAGC
TCAGCTTGGGCTACTTTTTATCAGAATTGCTGTAACCAAGCTTCCAAATT
GAAGCGAAATGTATTTATTTCTATTACAGCTTCCATTAATACACCTGAAA
CGAGCGTCATGTATATGTTCTATtatgataattaaataatttgaAGATGT
GATTCTTTTTCAGAGTCTACCTGAATATTGATGAatggaatacacgtttt
ttttataagaacaaactatataagaac
Run BLAST on NCBI

protein sequence of TCONS_00066214-protein

>TCONS_00066214-protein ID=TCONS_00066214-protein|Name=TCONS_00066214-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
MSAIMISYQWDSQPEAIRIKDALEADGYDVWMDLDDMRGNIYQKMAEGVE
NAAVILVCMSTKYENSVNCNRELQFSQDKRKQLIPIMIEAGYRPGGALGL
IIAGLKYVDFSNPGDFDDKMVELRDEITHYCKPTLQPTESAPKAASETAT
TGDYNMKLGVVEARAESWDGAATALVDKLRSRKLKRGQVVSVSAHNNGKN
ENAIFSAFYDINAPGQGDLEIHFDSQNSSSSWSTIYQTACEQAATVKLND
IIGISGSCNMDRAVFYVFSQVPSPVSDSATVEYVESRADTWEEAADGIIG
QLEANGVSNGQVLNIDAHNNGEGEAAIFSAHYSKDLPGKGPLSISYKAHN
GSSAWATFYQNCCNQASKLKRNVFISITASINTPETSVMYMFYYDN
Run BLAST on NCBI

transcript from alignment at scaffold_451:196805..205907-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066214 ID=TCONS_00066214|Name=TCONS_00066214|organism=Clytia hemisphaerica|type=transcript|length=9103bp|location=Sequence derived from alignment at scaffold_451:196805..205907- (Clytia hemisphaerica)
AAAAATGGAAAGCTTAAAAATATATAGGAGAAGAAAATCATCAACATTGC TCTTACAGAGAGGTGTGTGGATGCTCTCTCGATTGAAACTTTGATAGACT TGGAAGGTACATATATTTTTCGAATTTTAGGTTTGATATATTTATTGGTT TTTGTATAGGAATTTTCTTGTGGCATTTTTTTGTTTATTGGGCAAAAGGG TTACGATTTCCATGAAGATACATACACGTTTTTTTTATAAGGAACCTTAA CTTTGCTCTTATTTTTACAGAGAATTTCAGTCTCAAAGTTCCTTATCGAG TTCCTTACTACATAGGAAATTTTGAACTTTTTGCCCCTTGAAAGATCAAA ATTTGGTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTGTTCCTTATAAAAAAAAAACGTGTAACAGAAATCTATACTTTCCCCTT GAAACTTATATATTTTTATAATTTTTGAGTGATTTATTCATTGGGCTTTG CTCAGGAATTTTTGCGTTATTTAGTGGCATTTTTGTTTACTGGGTAATAA GGGCTATGATTAGTGTGAAAGTCGCTACCAGGCCATAAAACATTGATTAG GTCCATGTTCAATGTTTTTCATTGGCTTTCAGCAAGTTTTATTGACTGTC AAGAGCAAATCATTGACAAAAAATATTTTACACTGGCTGTCAATATTTCT CTTTTTTAAAGTCAATGTTTTGTATTGACTGTCAATATAAGTAATGAACA GTCAATGCAAAAGATTGACTGTTAATATTGACGGTCAATATATTCTATTA GTTTTCAAGAAAATTGATTGACAGTCAATGTAAAATATTTTTTCTCAATA ATTGCGGAACGACCGTTTTGAGGGCGCGAAGCGCCCGAATAGGGAGTGTA GCATCCTTTCTCTAGATCTGCGCGTGGCGTAAAAAAATCTGTATATGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATCTGTAT ATGTACGAAAATTTCTGAAAATGAGCCGGTGGAATGGCGAAATATCGACT TTGCTTTGTGTTGGATGGGATCAAAATTAGTTTAGCACTATTAAAAGTAT TTGTTTCGTAAAAGACTTATTTTAATAGAATGTTAATAGAATCTATATTT TGAGTATTATAATGTAAGATTTTTTATGAGAATTGCTACTTTTGTACAAA TAATAGTAGTAGTGTCAAAACTTTATCTCCTTTGCTTTTTTCCCGCTTCT TCCAGATGTCTGGGCCCAGTCTTTTTTTCTGCGTTTCATTTTCAAAACAA CAAAGATGGCTCAGAAGACCAACGAAACATTTCGCTAAATGCTCAGAGCG CGACAGCCCATTTTCCCTTTCCTATCTTTCACCTTACCTGTTTATTCTAC TTTCTGAGACTTAGTTTCTCATTTCTGACTGAGTTTTCATACCTGTCAAT CATTTGTCCATCAATTTCGACCAGACTAATTTTCGCACCGAGTGGGATTC AAACCACCACCAAAGAAAGACCTTCAGATTCGGAAGCCGGCGCTCTATCC GTAGATCCATCGCCGCACAGCAAAATCACGCAATTCATAACATATTATAC CAAACTGGCAAAAGACGGGGGTAATGTTATTATAATATGGGTAAAAGTAC CCTTTTTTAAACCTGACTGAAATTCGAGCCGTTACTAGCAACCCTGCGGG GCCCAAGGCGCCGAGTATGCACCCGGCACAGTGACAAGCCGTTACTAGCA ACCCTGACCCTACCCCCAATACCCCCTGAATCACGGAATGACGGATAGGA AGGATTATCGGGGAAAAAATTGCTCGTCGCGCTCTGAGCAATCAGCGAAA TCTCCAACGAATCTCTTCGTTTTTTGATGTGCATGCATTAACTTTTGGAC TGTTTATGGCCCATTGAAAGGTAAATCGAGGTTATCTTCATATTTTTCGC CTTTATAGTTTCTACTACCTTTGGAATGTTACATTAGTATTCTTTCTTTG TGTTGACTTTTTTGTATTAAATTAGACAAAATGTTTTTTTCTCTGCCATG TGTTTCATGGATATCATATGGCCATGTTTTCTTACCACAGGCTTATTTTT ATGGTTTGTTCTATTTTACTCTAACTATAATTATTTCCATCTCTTCTGTC TTCAGCTCAGGTGAAGGAGCTTGATGTGATGGGTGTGACTTTTAACTACC GATCGGCCGACTGGCTGAATCAGCTGTGTTTCAGTGTTTTGGTTGGTGAA CGTGCACAACAAAGACGCAGCATAAAACCAAAATANTTTCAGTGTTTTGG TGGGTGAACGTGCACTACAAAGACGCAGCATAAAACCAAAATATACGTAG CATTATGACTGTATGAACAGATTGTGATTGATGGAGAATAATAAAATGGT CCTGCTGAATATAAATTGTGCCAGTTCCATGTTATTCTGTGCAATGTTTA CAAGACAAAAGAGAGGACTTTACTGGAAAGTAGAATCAAAATGATAATTA CTGGTTGCTATTTTCGTCATTGAAGATTTCTTCAATATTTGTTCGATAAT GGAATCATTTGGATTTGGCTTGATTGATTCCATCATCGCTTGCTCGAGAG ATTTTTGTTTCATTGGAGCTTGATCATCATCAATTAGATTAATACCAATT TATATTTGTACGAAAAAGTGATAACAAAAGCATGATTGATGACTTTTTTA GCTCAAAAGACAACTTATATAAATGATAAAAGCACCTATATGTTACTTTA GATGCTAGCTCGAATATATTTTCAAACAAGATATGTTTCACAAAAAAGTA CTTTTTAAATGTACTGGCGAATCAACTTATATTTTCATAAACACTTTGAT GTGAGATTGTAGATAACGCTTGTTATTATTACCGCCTAATAAATAGTAAT GGCATTACTTTAATATACTTATATGAATTATGGAAGTTTTTGAATTGTAT TCTGCAAGACAAGGTTCTTGAAAAAATTAGTTTGGGCTGGTTTGGACTGA TTTTATAAATGAAACATTGGGAACATCTTTTTGCCGAACACACAATATCG CAAAAATATAGACTCACAAAAAGACAAAATTTCACTAGTCTTGATAAGTT ACTGGAAATTATTTCTAGGCTGCTGATTCCTTTTCAGAAAATTGATACAT TTGAAGTGAATGATATCATTAAGAGGTATCACATTTTGAGAGATTGTATA GGTTCTAATGGCTGGTCGAGCCCAGTGCGGTGCGCAAGCCTGGACGGCCT CAAGTTGAAACGTTTTTTTTTCGATCAGGCAGTCCATCTGCAAGTGTAAG GGGAAATATTTAGTCGCATTTGTGCGAATCTTGTTTGTATTCGACAGTCA ATATAACTTGCTAACAGTCAATGAACATGGGCCTAATCTATGTTTTTTGA CCTACTATAATAGAGATCTATACTAAACCCCTGTAGCATTGATCATCCTC ACCGAATCCTGTCAGCCTCATTAAATGAAGTTGTACCCAGCCCTGTTGCT ATAATTCAAAGAATCTTCATGACTAGACAACCTGAAAATGTCTCTGTTCT TTATTGGTAGAAAACCTTTATAAACAAAGCTTTGTACTGTAACTCAAATT AAGTATCCTGCGAATTCAATTTATAAAGACTCTAGAGTAATCACCGGGTC ACTGAGAAGGGGTGCTGCACTTAAACACCCCTGTCTCACAGGCCCGATGT AACATTTTCCCTCAATGGGGATAAAAATTCCTATTAAAATCCTAATGGGG GTAGAGATTCTTGTTCAAAGGTTAAAAAATCCATGGAGATGACTTGGGGT GCAATTTTTAAACATTGAATTTTGAGTTGAGATGAAATCAAAGTCAATTT CCCAGTGGGGCTGAAATTCCACTGTAATTTCCCACTGGGGATGAAATCTT TGGGGGTCCTAGCGGATCTGTGACAGAGGGGTATTTATTCGATTTCTATT TTTCGAATCTCTCTATAATTCGAACTTTTTTTCATTCCCGTCAATGAAGA AACCATCTAAAATATTTGCTAATATTGTTGTTATTAGAATTGATATTGAA GGGAAACCACGAATAACCAAACAAGATGTCGGCCATTATGATTTCATACC AATGGGATAGCCAACCAGAAGCAATCCGAATCAAAGATGCTCTAGAAGCT GATGGATATGACGTTTGGATGGATTTGGATGATATGAGGGGAAATATTTA CCAAAAGATGGCTGAAGGTGATTACTAGATAGACGTTTTTTTATAAGAAC AAACTACATAAGAACATAAGGCTTCGATGGCCAAAATGTTAAGAACAAGT TAAGAACATTTTAAGGCTTTGAGGACCCTAAAACACAAAATTTCTTAAGA CAATAGACACGAATACCCTCAAAATGGTGAAAATAAGAACATTTTAAAAA TACTTTTAGGCTAAAAACTCAAAAAGTTAAGAACATCCAAAAAACTTTGC ATGTTCTTATACAAGAAAAACGTGTAGATGATTTGATCGAAAGTTCAGAA TGAATTGGGAATGAAATTTTGGAGGAGTTCATTGGTTTCTAGGCTATTTT CTTTGCTATATTTAAATATTTTTGGATTCTGAGATCCTCTCCTTGTCTCG TGCCAAAGCCTAAGATTAACTTTACATTCCAGAAGTAAAATAGAGAAATT CAAAAATCATTTAGTAGTCCTTTTTTATCGAATATTATCATTTTGAGAAC ATCCTTGAATGATGCGAATACAGGGCTAGGTCGCGATATATGTGTGTCTG AAAATGTCGTTGCTTTTCACGTCTAATGGAATAAATTGACGTACGGCAAG TGAGAATTGTCATGTATGAAATCGGCAATTTCTCTCTCAATACGAAAATT TCATACTATCATACTACAGTCAGTAAAACATAACGGGATAATGCTCTTCC ACATGCTATGATTGTGTTACGTTATTGTATAAAATCATTGATTGAACGTT AACATAAACTGTCTCTTCTATACTATACAGAAAATCAGCGATATCCCCGT GGCTGAATTTCTTGGGGCGAATGGGGCAATGTGTGGCGAGTTGTGGCAAT AATATCAGCCACGGGGATATCGCTGATTTTCTGTATAGTATAGAAGAGAC AGTTTATGTTAACGTTCAATCAATGATTTTATACAATAACGTAACACAAT CATAGCATGTGGAAGAGCATTATCCCGTTATGTTTTACTGACTGTAGTAT GATAGTATGAAATTTTCGTATTGAGAGAGAAATTGCCGATTTCATACATG ACAATTCTCACTTGCCGTACGTAAGTTTATTCCATTAGACGTGAAAAGCA ACGACATTTTCAGACACACATATATCGCGACCTAGCCGAATACAGGGTGT CCCTAATTAAAGTATCGAGTTTGAACATGCGATTGAGTAGAAAAGTTTGT GTGTGTTATCGCTAAAATATAAGAACGTTCTCCATCACACAGGCNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCACACAGGCTTATTACAAAAGGTAGTTACAACGTAT AAATTAATCGTAATGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAATT TTGTGAACACGCACATAAACTTTCTACTCATAGTTGTGTTTCGACTCGAT ACTTTAATTAGGGACACCCTGTAGTATGTTAAAGATTCCAGAAAACACGC CCTAGTATTGAGAATGCAGAATGTAAGGAATGACTGTTTATTTTTTTCAG AGTCTATTAGTTGCCTATCAGCTGTGTTTTAAACATTCTTTTATTTGAAT TCTCTATTGATAAACATCTTTTGTTAAAGTTTCTATTATGTTTAAACCTA TAAATAAGCAATTCCCGGTGGGGCTTCCTAGTGGCTGCCTATATCAGAGT CTATAGACCAAGAGTAAGGCCTAAGAGCCTTGAGCTGTCTATTGTGTAGA CTAATTAGTTGACGGATATGCCTACGATTTTCCTATTTTTCCGACCCTTA GTAGGACTGAAATTTGATTTTCTGATTTTTCCGACCCTTAGCAGGACTTT GGAAGTATAAGGTACCCTTAAGGGTGGCACATACCATACCCTCCATTTGC CTAAGTAACCCCCCCTGGGTCTCCTTGATTTGAAAAACTTACAAGATTCG TTACATTTTCTTCACAGGTGTTGAGAATGCTGCTGTGATTCTAGTATGCA TGTCAACCAAATATGAAAATTCGGTCAATTGTAATCGAGAATTGCAATTT TCTCAAGACAAACGAAAACAACTGATTCCCATCATGATCGAAGCTGGATA CAGACCAGGTAAAGTTATATCATGGGCCTCGTCAACAGGAGGGGGTGGGG GCGTGGGGCGTGCCCCTCCCCTTTTTTGCAGACCCTGCCATATATTTTTT TAAAGTTACTATTTTAAGCTGGTTTGAGATTTATGTACATTAGAACAATA AAACTATTATTATCCCCAATTAGGTAACGTTTTAAGGTGTTTTGAGGGTG TAAAAAGTGAAAAATTTTCTCTGTTGCCCACCAGGGTCGCGATATTTTTT CCCAGAATATTGCCCCCCCCCCCTTCAACTCAAAATGGCTCGCCGGGGCC CATGAATATCTTGATAAAACAACCCTGTATCATTGAGTGACCCAATAAGA GTTGTTTGTCAAACTAATGATAAGATGAAGAGGTAAATGGAAAGGAGTTG TCTTTAAAATGACTTGTCTTTATTAAGAGGCAATTTAAAAAAGCTATTCA CTGGGGCAACCCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACGT TAAATGGACGTTAGATAAACGTCGAAAAAACGTTGTGTGCCTGCTGGGAA GTCTTTTACCGATTTTTCTCGTAAGTAGAGGGTCTCAAAAGACGTTTTAA ATTCCTGTAAACCCCTGGTACATAACTCTAACCTACTTAGGACCTTTGCA GATGCGAAAGCTAGTATATGGAAATTTTCTTTGATACCTTTTCTCTAGCT GTCTACCCGAAGGTAGGGGAGGGCGCCACTACTTTCCCTGGATTCCTCCA TTTACCCTTGATCCGTCTCTATAGTTGCTGAGCATCAAGCAGAGAGGCAT CAAATACCATTATGGGAATCTTTGGTATGACCCGGCTGGGAATCGAACCC ACAACTTTGGGCACCGTAGCTGGATGCTCTACCACTACACTACACGGTCG TTTAACATTGCACTATGGTCGATTTGCTATATGTGAAAGCTAGTACTCTG ACTTTCTTTGATACCAATTTTTGTCCTGGTTTCTCAAATACTTACAAGAC TGATTTAAATTGTTATTTCAGGTGGTGCTCTTGGTTTGATCATTGCTGGT CTTAAATATGTCGACTTCAGCAACCCTGGTGATTTTGACGATAAGATGGT GGAACTTAGAGATGAAATTACTCATTACTGCAAACCAACACTACAGCCAA CGGAATCTGCTCCAAAAGCCGCTTCGGAAACAGCCACAACAGGTAAGGGG TATATTTAGCCTATACGTCCATTAGCCATGTATTATGCTTAGAACTTCGG TTCTTTCAGCACTCTATAGACTCGGTTGAGGAGCAAGCTCTGCCTCTCCG TTCACCACAAGCGATTATGCGAAGCTCAACACTTAGTGTTTTGAGCACTC TGGTGAGCAGTCTATGCTCGGTTTCTGAGCCGGCACTGGTGAGTTCTGGG AAAGAAATGTTCTCACCAGGGGAGACTTTTTAACCGGTTATAGTGGAGTT TTTATAGTACAGCAGTCTTTTTAATTAATTCAAAACTTCGGTTTTCCTCT TTTCAATCTTTGCCATTGTTTATTGGTTACTAGTCCTGCCTACTTCATTG ATAAAATATTTTAGATAAGGAACTGAAAGATTCATAATTCATTTTTTAAG GTGANCAGTCCTGCCTACTTCATTGATGAAATATTTTAGATAAGGAACTG AAAGATTAATGATTCATTTTTAAGGTGATTATAACATGAAGCTTGGAGTT GTGGAAGCCAGAGCCGAGTCTTGGGATGGTGCTGCGACTGCATTAGTGGA TAAATTGAGGAGCCGTAAACTGAAACGCGGTCAAGTAGTATCTGTCTCCG CTCACAATAATGGTAAAAACGAGAATGCCATTTTCTCAGCTTTCTATGAT ATTAATGCCCCTGGTCAAGGAGATTTGGAGATTCATTTTGATTCACAGAA CTCATCCTCTTCATGGTCAACTATTTACCAGACAGCCTGTGAACAAGCTG CTACAGTTAAGTTGAATGATATTATTGGTATATCTGGCTCTTGCAATATG GATCGTGCTGTTTTTTATGTATTCTCACAAGTTCCAAGTCCTGTATCCGA TTCCGCTACAGTTGAATACGTTGAAAGCAGAGCAGATACTTGGGAAGAAG CTGCAGATGGAATTATAGGCCAATTAGAAGCAAACGGTGTCTCAAATGGT CAAGTCTTAAACATAGATGCTCACAACAACGGTGAAGGAGAAGCTGCCAT CTTTAGTGCTCACTACAGCAAAGATCTTCCTGGCAAAGGTCCATTGTCAA TCTCATACAAGGCACATAATGGAAGCTCAGCTTGGGCTACTTTTTATCAG AATTGCTGTAACCAAGCTTCCAAATTGAAGCGAAATGTATTTATTTCTAT TACAGCTTCCATTAATACACCTGAAACGAGCGTCATGTATATGTTCTATT ATGATAATTAAATAATTTGAAGATGTGATTCTTTTTCAGAGTCTACCTGA ATATTGATGAATGGAATACACGTTTTTTTTATAAGAACAAACTATATAAG AAC

Coding sequence (CDS) from alignment at scaffold_451:196805..205907-

>TCONS_00066214 ID=TCONS_00066214|Name=TCONS_00066214|organism=Clytia hemisphaerica|type=CDS|length=4764bp|location=Sequence derived from alignment at scaffold_451:196805..205907- (Clytia hemisphaerica)
GTGATTATAACATGAAGCTTGGAGTTGTGGAAGCCAGAGCCGAGTCTTGG
GATGGTGCTGCGACTGCATTAGTGGATAAATTGAGGAGCCGTAAACTGAA
ACGCGGTCAAGTAGTATCTGTCTCCGCTCACAATAATGGTAAAAACGAGA
ATGCCATTTTCTCAGCTTTCTATGATATTAATGCCCCTGGTCAAGGAGAT
TTGGAGATTCATTTTGATTCACAGAACTCATCCTCTTCATGGTCAACTAT
TTACCAGACAGCCTGTGAACAAGCTGCTACAGTTAAGTTGAATGATATTA
TTGGTATATCTGGCTCTTGCAATATGGATCGTGCTGTTTTTTATGTATTC
TCACAAGTTCCAAGTCCTGTATCCGATTCCGCTACAGTTGAATACGTTGA
AAGCAGAGCAGATACTTGGGAAGAAGCTGCAGATGGAATTATAGGCCAAT
TAGAAGCAAACGGTGTCTCAAATGGTCAAGTCTTAAACATAGATGCTCAC
AACAACGGTGAAGGAGAAGCTGCCATCTTTAGTGCTCACTACAGCAAAGA
TCTTCCTGGCAAAGGTCCATTGTCAATCTCATACAAGGCACATAATGGAA
GCTCAGCTTGGGCTACTTTTTATCAGAATTGCTGTAACCAAGCTTCCAAA
TTGAAGCGAAATGTATTTATTTCTATTACAGCTTCCATTAATACACCTGA
AACGAGCGTCATGTATATGTTCTATTATGATAATTAAGTGGTGCTCTTGG
TTTGATCATTGCTGGTCTTAAATATGTCGACTTCAGCAACCCTGGTGATT
TTGACGATAAGATGGTGGAACTTAGAGATGAAATTACTCATTACTGCAAA
CCAACACTACAGCCAACGGAATCTGCTCCAAAAGCCGCTTCGGAAACAGC
CACAACAGGTGTTGAGAATGCTGCTGTGATTCTAGTATGCATGTCAACCA
AATATGAAAATTCGGTCAATTGTAATCGAGAATTGCAATTTTCTCAAGAC
AAACGAAAACAACTGATTCCCATCATGATCGAAGCTGGATACAGACCAGA
TGTCGGCCATTATGATTTCATACCAATGGGATAGCCAACCAGAAGCAATC
CGAATCAAAGATGCTCTAGAAGCTGATGGATATGACGTTTGGATGGATTT
GGATGATATGAGGGGAAATATTTACCAAAAGATGGCTGAAGGTGATTATA
ACATGAAGCTTGGAGTTGTGGAAGCCAGAGCCGAGTCTTGGGATGGTGCT
GCGACTGCATTAGTGGATAAATTGAGGAGCCGTAAACTGAAACGCGGTCA
AGTAGTATCTGTCTCCGCTCACAATAATGGTAAAAACGAGAATGCCATTT
TCTCAGCTTTCTATGATATTAATGCCCCTGGTCAAGGAGATTTGGAGATT
CATTTTGATTCACAGAACTCATCCTCTTCATGGTCAACTATTTACCAGAC
AGCCTGTGAACAAGCTGCTACAGTTAAGTTGAATGATATTATTGGTATAT
CTGGCTCTTGCAATATGGATCGTGCTGTTTTTTATGTATTCTCACAAGTT
CCAAGTCCTGTATCCGATTCCGCTACAGTTGAATACGTTGAAAGCAGAGC
AGATACTTGGGAAGAAGCTGCAGATGGAATTATAGGCCAATTAGAAGCAA
ACGGTGTCTCAAATGGTCAAGTCTTAAACATAGATGCTCACAACAACGGT
GAAGGAGAAGCTGCCATCTTTAGTGCTCACTACAGCAAAGATCTTCCTGG
CAAAGGTCCATTGTCAATCTCATACAAGGCACATAATGGAAGCTCAGCTT
GGGCTACTTTTTATCAGAATTGCTGTAACCAAGCTTCCAAATTGAAGCGA
AATGTATTTATTTCTATTACAGCTTCCATTAATACACCTGAAACGAGCGT
CATGTATATGTTCTATTATGATAATTAAGTGGTGCTCTTGGTTTGATCAT
TGCTGGTCTTAAATATGTCGACTTCAGCAACCCTGGTGATTTTGACGATA
AGATGGTGGAACTTAGAGATGAAATTACTCATTACTGCAAACCAACACTA
CAGCCAACGGAATCTGCTCCAAAAGCCGCTTCGGAAACAGCCACAACAGG
TGTTGAGAATGCTGCTGTGATTCTAGTATGCATGTCAACCAAATATGAAA
ATTCGGTCAATTGTAATCGAGAATTGCAATTTTCTCAAGACAAACGAAAA
CAACTGATTCCCATCATGATCGAAGCTGGATACAGACCAGATGTCGGCCA
TTATGATTTCATACCAATGGGATAGCCAACCAGAAGCAATCCGAATCAAA
GATGCTCTAGAAGCTGATGGATATGACGTTTGGATGGATTTGGATGATAT
GAGGGGAAATATTTACCAAAAGATGGCTGAAGGTGATTATAACATGAAGC
TTGGAGTTGTGGAAGCCAGAGCCGAGTCTTGGGATGGTGCTGCGACTGCA
TTAGTGGATAAATTGAGGAGCCGTAAACTGAAACGCGGTCAAGTAGTATC
TGTCTCCGCTCACAATAATGGTAAAAACGAGAATGCCATTTTCTCAGCTT
TCTATGATATTAATGCCCCTGGTCAAGGAGATTTGGAGATTCATTTTGAT
TCACAGAACTCATCCTCTTCATGGTCAACTATTTACCAGACAGCCTGTGA
ACAAGCTGCTACAGTTAAGTTGAATGATATTATTGGTATATCTGGCTCTT
GCAATATGGATCGTGCTGTTTTTTATGTATTCTCACAAGTTCCAAGTCCT
GTATCCGATTCCGCTACAGTTGAATACGTTGAAAGCAGAGCAGATACTTG
GGAAGAAGCTGCAGATGGAATTATAGGCCAATTAGAAGCAAACGGTGTCT
CAAATGGTCAAGTCTTAAACATAGATGCTCACAACAACGGTGAAGGAGAA
GCTGCCATCTTTAGTGCTCACTACAGCAAAGATCTTCCTGGCAAAGGTCC
ATTGTCAATCTCATACAAGGCACATAATGGAAGCTCAGCTTGGGCTACTT
TTTATCAGAATTGCTGTAACCAAGCTTCCAAATTGAAGCGAAATGTATTT
ATTTCTATTACAGCTTCCATTAATACACCTGAAACGAGCGTCATGTATAT
GTTCTATTATGATAATTAAGTGGTGCTCTTGGTTTGATCATTGCTGGTCT
TAAATATGTCGACTTCAGCAACCCTGGTGATTTTGACGATAAGATGGTGG
AACTTAGAGATGAAATTACTCATTACTGCAAACCAACACTACAGCCAACG
GAATCTGCTCCAAAAGCCGCTTCGGAAACAGCCACAACAGGTGTTGAGAA
TGCTGCTGTGATTCTAGTATGCATGTCAACCAAATATGAAAATTCGGTCA
ATTGTAATCGAGAATTGCAATTTTCTCAAGACAAACGAAAACAACTGATT
CCCATCATGATCGAAGCTGGATACAGACCAGATGTCGGCCATTATGATTT
CATACCAATGGGATAGCCAACCAGAAGCAATCCGAATCAAAGATGCTCTA
GAAGCTGATGGATATGACGTTTGGATGGATTTGGATGATATGAGGGGAAA
TATTTACCAAAAGATGGCTGAAGGTGATTATAACATGAAGCTTGGAGTTG
TGGAAGCCAGAGCCGAGTCTTGGGATGGTGCTGCGACTGCATTAGTGGAT
AAATTGAGGAGCCGTAAACTGAAACGCGGTCAAGTAGTATCTGTCTCCGC
TCACAATAATGGTAAAAACGAGAATGCCATTTTCTCAGCTTTCTATGATA
TTAATGCCCCTGGTCAAGGAGATTTGGAGATTCATTTTGATTCACAGAAC
TCATCCTCTTCATGGTCAACTATTTACCAGACAGCCTGTGAACAAGCTGC
TACAGTTAAGTTGAATGATATTATTGGTATATCTGGCTCTTGCAATATGG
ATCGTGCTGTTTTTTATGTATTCTCACAAGTTCCAAGTCCTGTATCCGAT
TCCGCTACAGTTGAATACGTTGAAAGCAGAGCAGATACTTGGGAAGAAGC
TGCAGATGGAATTATAGGCCAATTAGAAGCAAACGGTGTCTCAAATGGTC
AAGTCTTAAACATAGATGCTCACAACAACGGTGAAGGAGAAGCTGCCATC
TTTAGTGCTCACTACAGCAAAGATCTTCCTGGCAAAGGTCCATTGTCAAT
CTCATACAAGGCACATAATGGAAGCTCAGCTTGGGCTACTTTTTATCAGA
ATTGCTGTAACCAAGCTTCCAAATTGAAGCGAAATGTATTTATTTCTATT
ACAGCTTCCATTAATACACCTGAAACGAGCGTCATGTATATGTTCTATTA
TGATAATTAAGTGGTGCTCTTGGTTTGATCATTGCTGGTCTTAAATATGT
CGACTTCAGCAACCCTGGTGATTTTGACGATAAGATGGTGGAACTTAGAG
ATGAAATTACTCATTACTGCAAACCAACACTACAGCCAACGGAATCTGCT
CCAAAAGCCGCTTCGGAAACAGCCACAACAGGTGTTGAGAATGCTGCTGT
GATTCTAGTATGCATGTCAACCAAATATGAAAATTCGGTCAATTGTAATC
GAGAATTGCAATTTTCTCAAGACAAACGAAAACAACTGATTCCCATCATG
ATCGAAGCTGGATACAGACCAGATGTCGGCCATTATGATTTCATACCAAT
GGGATAGCCAACCAGAAGCAATCCGAATCAAAGATGCTCTAGAAGCTGAT
GGATATGACGTTTGGATGGATTTGGATGATATGAGGGGAAATATTTACCA
AAAGATGGCTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041436XLOC_041436Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066214-exon-scaffold_451-1575043694:205802..205907TCONS_00066214-exon-scaffold_451-1575043694:205802..205907Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1575043694:201441..201620TCONS_00066214-exon-scaffold_451-1575043694:201441..201620Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1575043694:199300..199440TCONS_00066214-exon-scaffold_451-1575043694:199300..199440Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1575043694:198116..198286TCONS_00066214-exon-scaffold_451-1575043694:198116..198286Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1575043694:196805..197633TCONS_00066214-exon-scaffold_451-1575043694:196805..197633Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1510915933:205802..205907TCONS_00066214-exon-scaffold_451-1510915933:205802..205907Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1510915933:201441..201620TCONS_00066214-exon-scaffold_451-1510915933:201441..201620Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1510915933:199300..199440TCONS_00066214-exon-scaffold_451-1510915933:199300..199440Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1510915933:198116..198286TCONS_00066214-exon-scaffold_451-1510915933:198116..198286Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1510915933:196805..197633TCONS_00066214-exon-scaffold_451-1510915933:196805..197633Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1491911889:205802..205907TCONS_00066214-exon-scaffold_451-1491911889:205802..205907Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1491911889:201441..201620TCONS_00066214-exon-scaffold_451-1491911889:201441..201620Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1491911889:199300..199440TCONS_00066214-exon-scaffold_451-1491911889:199300..199440Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1491911889:198116..198286TCONS_00066214-exon-scaffold_451-1491911889:198116..198286Clytia hemisphaericaexon
TCONS_00066214-exon-scaffold_451-1491911889:196805..197633TCONS_00066214-exon-scaffold_451-1491911889:196805..197633Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066214-proteinTCONS_00066214-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:196805..205907 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0285847 0 0 0.432826 0.125771 0.0754709 0.175294 0.123437 0.244719 0.177063 0.155192 37.3092 24.7638 0.0496193 0.196766 20.0513 19.6259 59.7405 68.9467 27.9869 26.969 7.96403 11.334 14.166 14.0702 4.10699 4.05794 3.03443 2.76923
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000157TIR_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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