TCONS_00066264 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066264
Unique NameTCONS_00066264
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066264 ID=TCONS_00066264|Name=TCONS_00066264|organism=Clytia hemisphaerica|type=transcript|length=155bp
cttttgtaaaatttgcagaTTTGGGATTTCTTTTCATTATCTTTGATTTC
gcctctttttgttttgttggtttcgTCATCTTCACTTTGTTTACCAGCAG
AGAAATTATAATCAGATGACTGGTCAATGTCGACAACATCAACATCAGTT
GTTGA
Run BLAST on NCBI

transcript from alignment at scaffold_451:83523..83677

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066264 ID=TCONS_00066264|Name=TCONS_00066264|organism=Clytia hemisphaerica|type=transcript|length=155bp|location=Sequence derived from alignment at scaffold_451:83523..83677 (Clytia hemisphaerica)
TCAACAACTGATGTTGATGTTGTCGACATTGACCAGTCATCTGATTATAA
TTTCTCTGCTGGTAAACAAAGTGAAGATGAcgaaaccaacaaaacaaaaa
gaggcGAAATCAAAGATAATGAAAAGAAATCCCAAAtctgcaaattttac
aaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041466XLOC_041466Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066264-exon-scaffold_451-1491911889:83523..83677TCONS_00066264-exon-scaffold_451-1491911889:83523..83677Clytia hemisphaericaexon
TCONS_00066264-exon-scaffold_451-1510915933:83523..83677TCONS_00066264-exon-scaffold_451-1510915933:83523..83677Clytia hemisphaericaexon
TCONS_00066264-exon-scaffold_451-1575043694:83523..83677TCONS_00066264-exon-scaffold_451-1575043694:83523..83677Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:83523..83677 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066264 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top