TCONS_00066375 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066375
Unique NameTCONS_00066375
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length578

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066375 ID=TCONS_00066375|Name=TCONS_00066375|organism=Clytia hemisphaerica|type=transcript|length=578bp
CCTTCTTTGACTTTCTGTCCAGCTTGTGTCAGCCAAACAATGAGATCTTC
AGCCATCTTGCCACTGTCaatcaaagattaaaaagatgCAATAAACCTCT
TGAAGTCAACGACGGAGTACTAGCAGATTGGACCAAGATACCTACCTCTT
ACTTTCAATTAGGCGCTCCCATCTCTAACGTtgaaaatggcaaaacgatA
AATTTGGAACACGTTCCACTGAAGCATACGCTCGTATTTCAACAAATGCT
TATCATGACGAAGTCTCCAATTTGGAATTGCTTGCTGATGAAGCAGACGC
TCATATCTCAACAAATGCTTATCATGACAAAATCTCCAATTTGGAATTGC
TTGCTGATGAAGCAGACGacGGAGTTAAGTTGTATGACGGTTCTACAACT
TCTTCTGAGTCAAGTGACAATCAAGGTCCAGAGCCCGACCAagacttttt
aaaatttcttgttGAAGACGATACAATCCTGGATTTCATCAAAGGAGACG
AATCCTTAAGAAGGCAATCGGAACgatttcaagtttttaacaGCCGTTCA
TCACTGATACAATTCAGGAGCTGCGCTG
Run BLAST on NCBI

protein sequence of TCONS_00066375-protein

>TCONS_00066375-protein ID=TCONS_00066375-protein|Name=TCONS_00066375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
FFDFLSSLCQPNNEIFSHLATVNQRLKRCNKPLEVNDGVLADWTKIPTSY
FQLGAPISNVENGKTINLEHVPLKHTLVFQQMLIMTKSPIWNCLLMKQTL
ISQQMLIMTKSPIWNCLLMKQTTELSCMTVLQLLLSQVTIKVQSPTKTF
Run BLAST on NCBI

transcript from alignment at scaffold_454:52660..64067-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066375 ID=TCONS_00066375|Name=TCONS_00066375|organism=Clytia hemisphaerica|type=transcript|length=11408bp|location=Sequence derived from alignment at scaffold_454:52660..64067- (Clytia hemisphaerica)
CCTTCTTTGACTTTCTGTCCAGCTTGTGTCAGCCAAACAATGAGATCTTC
AGCCATCTTGCCACTGTCAATCAAAGATTAAAAAGATGCAATAAACCTCT
TGAAGTCAACGACGGAGTACTAGCAGATTGGACCAAGATACCTACCTCTT
ACTTTCAATTAGGCGCTCCCATCTCTAACGTTGAAAATGGCAAAACGATA
AATTTGGAACACGTTCCACTGAAGCATACGGTTAATATGTTTAAATGATT
TATTTCTTTAAACTGGATAATAAATTTCGTTGAGGTTTTCGTTTGCTTCA
TTTTTGAGAATATGTTCTCCTTAAATTTCATTTTAGCTCCACTCTCAACA
AATGCTGGAAATGGCAACATCGCAAAAACACAGTCTACTGCGATAACGAT
AATTTCGGCTTAATTATATTGATTTTAGTTGTAATTTTCATGATAAAAAT
ATTATTGAACTTTTTGAAATTTCAATATTCTCCAAATTTCATTTTAGCTC
GTATTTCAACAAATGCTTATCATGACGAAGTCTCCAATTTGGAATTGCTT
GCTGATGAAGCAGACGGTAATTTCGGCTTGATTATATTGATTGTAGTTGT
AATTTTCATGATAAAAATATCATTGAATTTTTTCAAATTTCAATGTTCTC
CAAATTTCATTTTAGCTCATATCTCAACAANCGGTAATTTCGGCTTAATT
ATTTTGATTGTAGTTGTAATTTTCATGATAAAAATATCATTGGCTTCTTT
TAAATTTCAATGTTCTCCAAATTTCATTTTAACTCATATCTCAACAAATG
CTTATCATGACGAAGTCTCCAGTTTTGAATTGCTTGCTGATGAAGCAGAC
GGTAATTTCGGCTTAATTATATTGATTGTAGTTGTAATTTTCATGATAAA
AATATCATTGAATTTTTTTAAATTTCAATGTTCTCCAAATTTCATTTTAA
CTCATATCTCAACAAATGCTTATCATGACGAAGTCTCCAGTTTTGAATTG
CTTGCTGATGAAGCAGACGGTAATTTCGGCTTAATTATATTGATTGTAGT
TGTAATTTTCATGATAAAAATATCATTGAATTTTTTTAAATTTCAATGTT
CTCCAAATTTCATTTTAACTCATATCTCAACAAATGCTTATCATGACGAA
GTCTCCAGTTTTGAATTGCTTGCTGATGAAGCAGACGGTAATTTCGGCTT
AATTATATTGATTGTAGTTGTAATTTTCATGATAAAAATATCATTGAATT
TTTTTAAATTTCAATGTTCTCCAAATTTCATTTTAACTCATATCTCAACA
AATGCTTATCATGACGAAGTCTCCAGTTTTGAATTGCTTGCTGATGAAGC
AGACGGTAATTTCGGCTTAATTATATTGATTTTAGTGGTAATTTTCATAA
TAAAATCTTAATGAATTTTTTGAAATTTCAATGTTCTCCAAATTTCATTT
TAGCTCATATCTCAACAAATGCTTATCATGACGAAGTCTCCAATTTTGAA
TTGCTTGCTGAAGAAGCAGACGGTAATTTCGGCTTAATTATATTGATTTT
AGTGGTAATTTTCATAATAAAATCTTAATGAATTTTTTGAAATTTCAATG
TTCTCCAAATTTCATTTTAGCTCATATCTCAACAAATGCTTATCATGACA
AAATCTCCAATTTGGAATTGCTTGCTGATGAAGCAGACGGTAATTTCGGC
TTAATACATGTTTTCGAACTTAGTTGCACGGATATGCCTTTTGATTTCTT
AACTAGATCCAATCTTATTTTGACATTGTTTTCTTTTTAATTTATGTGGG
GGAACCGACGGGCATTTCCAAGGGTATATTTTTGCGAAGCGAATTTATGA
GCGAAGCAGTTTTGCTATATTGTGTGCACGTACCTTTAACTTCTATCCCA
AGCGAAAATAGGCCCAAAATTTGCTATATAAATCACATCTTCAATCCGAT
GGTTTTGTCAAAATGACCTTGAAGGCTTTGGGTCAAAGCCACAAAAATTT
TCTCGGTTTGGTAGCTAGGACTGCGAAAAATGCCGTTTTAAAATGGTGTA
CCCTAGCAGTGAACAGCAAAAAAATTACCGGAAGCNNNNCTAGTGTATAT
GTATAAGAATTGCGAAGCGATCCAGGCAAGTCACTCGATTCGCAAGTTGC
AAGCAAAATATTTAAATCAAAAGGGTCATAGATTTGAAATAATCGATCCG
TAAATGTAAAACCTGAAAAACCGACAACTAGTCTGGACAAGGAAGACCGA
ACCCTTTAGAGATTTATTCAAACAGTTATGACGTTTACTTCGTTTACTTC
TTTCAGTGCATTTTCTCTTGATTTACCCACCCCTTATAGTGCACTATATT
TCTCAGCTGTAAATCTGCGTGAAAGAAGAAGCTTGGGAAATTTTCTGTTT
CAAAAAAAAACTGAGAAAATTATTCATACCAGCTGTAATTATCAGACAAT
AGAAACTTATTCAAACAAACGAGCAGTAAAAGCCTTTCTTTTTATCAATT
ATTTTGAATTTATTTTAAAATTCGACCCTTGCAGTGCAATCTCACAGAAA
CACACCCTTACAGTGCATTTTGGGATGCTGAAAAACCCAACCCTTAAGCG
CGACCCTTAAGTGTTTTTAATTATTGTTAGTTTTTGTTTTGACTCGTTTT
ACTTCCGGTTTCGAATTCCTTGTGTTCGAAATCGATCTTTCGAATCTTTT
CTAATTTCAAAATTCGAACGTTCGAATAAAAACATTCGAAAACTTTTTCC
AAATTGCAATGTTTTGTAAACACCCCTTAACCTTAAGAAGAATTTCTATC
CCCATTAGGATTTTAATAGGAATTTTTATCCCTACTAAGGAGCCCCAAAG
GAAAAAGGTTCCACCGGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCCTTAAGAAGAATTTCTATCCCCATTAGGATTTTAATA
GGAATTTTTATCCCTACTAAGGAGCCCCAAAGGAAAAAGGTTCCACCGGG
CTGCGAGACTGGGGTGTAGACTAGTTACAGTAAACAAAAAAGTTTCAATA
AAAGTCTTGCAAAACGATCCCCTTCTAACTAGCCTATTCAAAAGGTCTCC
CTTACAGAAAGCCCAGAGGAGCAACAAAATTAAACAAACTTTAAACACTA
CCATCTCGATAAACCATCGAGACAGTATAGGACAAATACAAAGGATTTCA
AGACTAGAATTTAATGAATGGAAATAAGTTAACTTATGCAATTTCGATAT
TCAGAATTACAATAACCATACCTATAATTAGGAGTATTATTGCATCATAA
ATTCTGAAAAATGTAACAAAGTTCGGAAATTATATTAAAACTATTATATA
GGGCTGTAAAATCCTGATATGAAAATGAAGAAAATTCAGATAAAAAGAAC
TGAGATAAAAAAGCTGAGATTCAGAAAGAATTCTAAAACGACTCTGATCG
TCTGATCGTCTGATCTACTCAGCAAAACATCTAAATTTTCCTGCCTGTGT
ATTTTTTCAAAGTTGGGAAATCTAAAGGCTCTTAAAATCTTAAGTCTGCA
AACAGGAGCAAACTCTTTACATAAAAAAGTAAAAAATCTGTGACTTTTTT
TACGGCTGTAGCACAGGAATTTAAAACAGTTAAAATGCATCCATAAATGT
TTTGTCGTTGTATTTCAACATTTTACAAGTCATTACCATTAATTACCATT
ACCAACAATAAAATCCTTTATAATACAGTCACATGTCAATGACGTTCTAT
ATCTTTGACCATCGATGCATATTCATAAAAAACAAACAACCAAAGATCCC
ACATCATCGAGGGTCGGCCAAGCCAAAATTTCACAACGACAAACAAACAT
TTCTCCTTCCACCGAATAAGGGAATGGCTTTCCCACCATATGTATACAGT
TCATTTCTTCAGCTTAGATCCTCTTCTTGCAATGAAGCAACAACTCTGTT
GAGCCTTGCCTGTCGATGAAAGAATAAAAATTCCATCTTCTTTCTTCTCA
TTCCGCAAGTTCAGCTGCTTTCCTCGTTTCTTTTCATCAAGCACCATCTC
TTTTCAAAACTCCAATTTCTCTTTTCAAAACAACAATAAATGTTTGTTGT
CAACATTCGAATTTGGAAAAGTTCGAAACCCCTTCGAAAGTCTTTGTTCG
AGTCAATGCAATGACTTCTTGAAAAATGAGCGCCATTTGAACGCTTCTTG
AACGCTTCCAGCCCGCGCTGATTTTCCGATCTATTCTTCAGATTTCCTAA
TTTAAACCTTAAGGAGATAAAAACAAGGCTTATCTAGTACCGGTAACCAC
GTGTATTATCTCCGTAGCTTTTAAGAATTGGTATATCTAAACGCACGAGG
CGACACTTTTTGAAAAAAAACGAATTTAACCATCTGCAATTTCAGGTCTC
TCTCCGCCGCGGTTCTAGGTTTGATCTAGGAAGGGCGGACGGCTTTCTCA
ATCATTTCTGCGTTTGAAAGATTGGATATATATAGTAATTTTTCATTTGC
GCTCCCCAGCGTAGGTGAGATTTAAAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTT
CGAAAGCCATTCGAAAGTCTTTGCTCGAGTCAATGCAATGACTTCTTGAA
AAAAGAGCGCCATTTGAACGCTTCTTGAACGCTTCCAGTCCGCGCTGATT
TTTCCGACCTTTTCTTTAAATTTCCTAATTTAAACCTTAAGTAGATAAAA
ACCAGGCTTATCTAGTACCGGTAACCCTATGTATTATCTCCGTAGCTTTT
AAGAATTGGTATATCTAAACGCACGAGGCGACACTTTTTGAAAAAAACGA
ATTTAACCATCCGTAATTCCAGGTCTCTCCGCCGCGATTCTAGGTTTGAT
CTAAGGAAGGGCGGACGGCTTTCTCAATTTCTGCGTTTGAAAGATTGGAT
ATATATAGTAATTTTTCATTTGCGCTCCCCAGCGTAGGTGAGATTTAAAG
GTACATATACACGATAGCAAAACTGCTTCGCTCATGTATATTCGCTTCGC
AAAAATCTGAAGTTGATCAAATTGCTGCGCGGGCGGCACACATTTAAACA
GGGCAGTGGTTCTTCGGTTTTAAATGTTTATTTTGCTGTTAAATGGAAAA
CTAGTGTATATGTATAAAAGTTGCGAAGCGATCGAGGCAGGTCACTAAAT
TCGCAAGTTGCAAGCAAAAAGAAAGAAAGTATTGAATGAGCCCGATAAGT
TCTTTTTTCTAACGTTATAGGGTCTCACCAAACAAAAATTATTTATACCT
TATTACATGAATCTAAGTATGGAATTTAACGGCCTTGAAATTAACATGAA
ATTTCTAAATTCGTGTTAACTCTGTTAATTACACGTCTCCTAATACTCAT
GTAAGGTAAGTAAAAAATATTCGAAGAAAATTTTAAAATCGCGTCTTTTG
TTCGGGAAAGCTTTTCCACCTAAACCTAAAAAGTAAATCATTTTTAATTA
CGATTTTTATTTTGACTCATTTTACTTCCGGTTTTAAATTCCTCGTGTTC
GAAAATCGAACTTTCAAATCTTTCGAATTTCGAATGTTTCAATAAAAACA
AACATTCGAATCCCCCTACTTTTTTATTTGTTAGAATCCCAGGGTAGACA
GACTTTCCTCAGTAAATGATTGGTGACTCGATGATAGTATTCATGGCTTC
GAAGATTTTTACATNCTGCCATAAATTGTTTTTTATTTGTTAGAATTCCA
GGGTAGACAGACTTTCCTCAGTAAATGATATTGGTGACTCGATGATAGTA
TTCATGGTTTCCAAGATTTCTACATGTAAATGTTGATATCAAATCTAGTC
TTTATTTTAGAGTCCCTTGCATACAACCAAACCCAATCAAAACAAAAGAA
TCCTCGGGGTCAAGCACTATCCGGTTTAAACACCAGTCGGTCTATTGAGA
CAGGGATGTGAAATACTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAC
CCCCCCCCCCCCCAAAAAAAAAAAAGATTCCCCCAATATTAAAGATTCTT
CACAAAAAAAGAAAGATTCCCTCAAAGTTAAAGATTCCCCCAAAAAGAAA
GATTCCCCCAAAAAACAAAGATTCCCCCAAAAAAGAAAGATTCCCCCAAA
AAAACAAAGATTCCCCCAAAAAAACAAAGATTCCCCCAAAAAAAAGAAAG
TAAGATTTTTGCCCGTGTCGGCCACCGTAATACCCAGTTACGAGTTAGAA
ATATTGTATCAAGTTACATCATTATTTACACAAACATTTAAAAGTTTAAG
TTCTATAATTATAATAAAACTATTAGTGGTATAAAATCCTAAAGATAAAT
ATAAAGAAAAACCAGAAAAAAAGAACTAAAATTTAAGAAGATTCTTACAA
TTCCTTCAACCAGGGTTTCCTTCAACAATCAAGCAAAAAACCTCATTTTT
AATGGCTGTATTTTCCAAAGTGGTGAAGCCTATAGGGTTTTTAATCTTAA
ATCTGCTGGAGACAAATGTTTGACAGTCTTACCATTGATTTAGGAGCAAC
CTCTTCACATTAAAATAATTTTATCAGCTGTAGCACAGAAATTTAAAACA
GTTAAAAGTACATCATCTCGACATCATAAATATCCATAATATCATGTTTT
GATAACTGTCAAGATTAGTTCATGGACACATATTTCGATATTTCACAAGT
CATTTTCATTTCCAGCAATTTCCAAAATCCTTTTTACAATCATATGTTTC
CTCAATAGTTACTTTATCCTGGCCATCAAATGCATATTTATAACAGCAGG
CAACCAGAGCCCACATATTTTCGTCCATTTTCGAGCAGCCAAGTCAAGAT
TTCAAGAACAACGACAAACAATCAGTTCTCTTTTCCACTGAATGAGAGGA
AGGATAAATTCTACCAGATTATCCAAAACTTGAATATGTTCGTCCCCATC
TCAAAGCATGCAAAAAGGCCAAGTTCATGTTCTTGCTCACTCTCTTATAG
TTATATTCGCTGCTTTGCAAAAAAGTTTTTTTCACCACGTATGCAGGTCA
TTTTTCAGCTTTCCTTTTCTGGAAATGACACAAAAACTCTGTTGAGCCTG
TCTTGTCATTGAAACAATAAAAATTTCCATCTTCTTTCTTCTGTTCTTTC
TCTTTGCTACAGTTTCAGCTTCTTCTTTCAACCAACATCTTACACCTCTT
CAACTTTTTCAAAACATTCAACGTTTCATTTTTATTTCTCACAAAAAAGT
AAACATTCGAAATTGGAAAGATTCGAAGGTTCGAAAGTGTCAGTTTTCAC
TGATCGAGTCAATGCAGCGACTTCTTAAAAGGGAGCACCATGAAAGCAGA
GAGAGAGTTTGAGTTCTTTGAACGCTTCAACCGCACGCTGGTTTTCCGAA
CCAATCAGCTTTCTGATATTTGAACGCTTCGACCGCGCTCTGGTTTTCCG
AACCAATCAGCTTTCTGATATGGAGCGGGAGTAAANNNNNNNNNNNNTGT
CCGAGAATAAAATCGGGGAAAAAAATGTTTGAAGGTGGGCCAAAGGGTGG
GCCAAGGGTAGGCCATATGGCCCGGGCCAGAGAGGTGGGCCAGGTTTTTT
ACCTACCCAGTAAAGAAGCTAAAAATGTACGGGAACGACGGAATATCTTT
TATGGAAGTTGCCCTGACTCGGAAATTTTCGGCACCGTAGAGTGGTTCTT
TTTCTCGACGAAGCCATCCTAAATACAATCTACCAAACCGATATTGTAAC
GCCTCCTACCTGGACGAAAACAACCGGGATCTGAATACTTAATCCACATT
TAACATATGAGAACTAAATTTTCGTTTTCGTCTTGCGCTCCCCTGGGTAT
ATAGAATTTAAAGGTAAATGCACACTATAGCAAAACTGCTTCGCTCATGT
ATATTCGCTTCGCAAAAACTGTTTGAAAGATGACAGAAAGGATCTTCATC
ATTCCTTGACTTTTAAAAGTAACCATCAAGTATCAAATAAGATCAATAAA
TGAGAAGTTTTTGCTGGTCGCGCGGGCGGGAAAAGTGCTCTTTTAAGCGA
ACTAAACTTACCTTGCAAAACCAAGTTGATATTCAATGATTAAAGAGATA
CGGAGGTAATCAAATTTGTCGAATTTGTCAAGAAAACAAATCAAAACTGA
CCAAGAACCAACAACAAGCCATCTTTATAGATTTTTGCTTTTGTTTACTT
TTGATGATTTCGATAGACGCAGACGATTCGAATAAAAATGTTCGAACGTT
CGACAAATATCGTTCGATTTTTTAAGGCACCATTTACATTAGAAGAACTA
GAATGAAGGAAAGATCGTTGCGCGGGGTGGCGGGAGTTGTGCCGCCGAGG
TTTGTTTGGTGTGTTTGGGGTATTATAAGGCTTAAGACCCTGTCTCTTTT
GGGGTTTTATCAAAGTGTCTATTATTTTGCTAGCAACTTGCGAATTGAGG
TGGAGTCTGGATCGCTTCGCAACCCTTATACAATACAGCTAGTTAAAATA
GCAGAAATACACTGTAGGGGTGGACTTATGATAAATGCACTGAAAGGGTC
GAAGATCTAGTAAATCTAGGTAAAATTGCAAAATTTGGCCCAAAAATTCT
GAATTTTTTGTGTCTAAAAGAGTTGAAAATTCGAGAAAATAATATATCGT
AAGGATATGAATTTCACTAATTTTTTTCTGCACTGTATGGGCACTGTATA
TACCGCTCGCCAAAGGTAATTGTTTCAGTAAAATGTCCGTCAGTAAAATC
AAAATATGGTACGACATTTAAAAACATAGCAAATTTTAGGCTGATATAGT
TTATAAGTTATGCGGTCATTATCACAATGCAGTTAATTATTCGCATAAAT
TTCAAAATTTAAGCTTTTGTTTGTAACCAACATTTTTTAATTTATAGACG
GAGTTAAGTTGTATGACGGTTCTACAACTTCTTCTGAGTCAAGTGACAGT
AAGTGTTTGATGTTTTATACAAAACATTTAAGTTACAATTTTCAGAAACA
AAAACACAATTTGCTTCACAGTACTTTAAGTTTCATGTTAATACAATCAT
CAGCAGTTTTTTCCTTATGAAATTTCGACTATTAAAGTACTACTGGGGGT
GAATAAATGTGTATCATTTGACCCTCTTCAATAAATAAATTTTTTGAGGG
TTTTCGACATCTTTAGGAAGAAAATACAGATATCACAGCTCAAATTTATC
ACGTACTGTTACTTTTCAAATTTGTCAACTACCTTTCTACTTATGTGTTA
GTGAAAACCCCAAAAAATTGTACGTTACAAATGTGCAATTTCATTATAGA
TCAAGGTCCAGAGCCCGACCAAGACTTTTTAAAATTTCTTGTTGAAGACG
ATACAATCCTGGATTTCATCAAAGGAGACGAATCCTTAAGAAGGCAATCG
GAACGATTTCAAGTTTTTAACAGCCGTTCATCACTGATACAATTCAGGAG
CTGCGCTG

Coding sequence (CDS) from alignment at scaffold_454:52660..64067-

>TCONS_00066375 ID=TCONS_00066375|Name=TCONS_00066375|organism=Clytia hemisphaerica|type=CDS|length=2250bp|location=Sequence derived from alignment at scaffold_454:52660..64067- (Clytia hemisphaerica)
ATCAAGGTCCAGAGCCCGACCAAGACTTTTTAAACGGAGTTAAGTTGTAT
GACGGTTCTACAACTTCTTCTGAGTCAAGTGACACTCATATCTCAACAAA
TGCTTATCATGACAAAATCTCCAATTTGGAATTGCTTGCTGATGAAGCAG
ACGCTCGTATTTCAACAAATGCTTATCATGACGAAGTCTCCAATTTGGAA
TTGCTTGCTGATGAAGCAGACGTTCTTTGACTTTCTGTCCAGCTTGTGTC
AGCCAAACAATGAGATCTTCAGCCATCTTGCCACTGTCAATCAAAGATTA
AAAAGATGCAATAAACCTCTTGAAGTCAACGACGGAGTACTAGCAGATTG
GACCAAGATACCTACCTCTTACTTTCAATTAGGCGCTCCCATCTCTAACG
TTGAAAATGGCAAAACGATAAATTTGGAACACGTTCCACTGAAGCATACG
ATCAAGGTCCAGAGCCCGACCAAGACTTTTTAAACGGAGTTAAGTTGTAT
GACGGTTCTACAACTTCTTCTGAGTCAAGTGACACTCATATCTCAACAAA
TGCTTATCATGACAAAATCTCCAATTTGGAATTGCTTGCTGATGAAGCAG
ACGCTCGTATTTCAACAAATGCTTATCATGACGAAGTCTCCAATTTGGAA
TTGCTTGCTGATGAAGCAGACGTTCTTTGACTTTCTGTCCAGCTTGTGTC
AGCCAAACAATGAGATCTTCAGCCATCTTGCCACTGTCAATCAAAGATTA
AAAAGATGCAATAAACCTCTTGAAGTCAACGACGGAGTACTAGCAGATTG
GACCAAGATACCTACCTCTTACTTTCAATTAGGCGCTCCCATCTCTAACG
TTGAAAATGGCAAAACGATAAATTTGGAACACGTTCCACTGAAGCATACG
ATCAAGGTCCAGAGCCCGACCAAGACTTTTTAAACGGAGTTAAGTTGTAT
GACGGTTCTACAACTTCTTCTGAGTCAAGTGACACTCATATCTCAACAAA
TGCTTATCATGACAAAATCTCCAATTTGGAATTGCTTGCTGATGAAGCAG
ACGCTCGTATTTCAACAAATGCTTATCATGACGAAGTCTCCAATTTGGAA
TTGCTTGCTGATGAAGCAGACGTTCTTTGACTTTCTGTCCAGCTTGTGTC
AGCCAAACAATGAGATCTTCAGCCATCTTGCCACTGTCAATCAAAGATTA
AAAAGATGCAATAAACCTCTTGAAGTCAACGACGGAGTACTAGCAGATTG
GACCAAGATACCTACCTCTTACTTTCAATTAGGCGCTCCCATCTCTAACG
TTGAAAATGGCAAAACGATAAATTTGGAACACGTTCCACTGAAGCATACG
ATCAAGGTCCAGAGCCCGACCAAGACTTTTTAAACGGAGTTAAGTTGTAT
GACGGTTCTACAACTTCTTCTGAGTCAAGTGACACTCATATCTCAACAAA
TGCTTATCATGACAAAATCTCCAATTTGGAATTGCTTGCTGATGAAGCAG
ACGCTCGTATTTCAACAAATGCTTATCATGACGAAGTCTCCAATTTGGAA
TTGCTTGCTGATGAAGCAGACGTTCTTTGACTTTCTGTCCAGCTTGTGTC
AGCCAAACAATGAGATCTTCAGCCATCTTGCCACTGTCAATCAAAGATTA
AAAAGATGCAATAAACCTCTTGAAGTCAACGACGGAGTACTAGCAGATTG
GACCAAGATACCTACCTCTTACTTTCAATTAGGCGCTCCCATCTCTAACG
TTGAAAATGGCAAAACGATAAATTTGGAACACGTTCCACTGAAGCATACG
ATCAAGGTCCAGAGCCCGACCAAGACTTTTTAAACGGAGTTAAGTTGTAT
GACGGTTCTACAACTTCTTCTGAGTCAAGTGACACTCATATCTCAACAAA
TGCTTATCATGACAAAATCTCCAATTTGGAATTGCTTGCTGATGAAGCAG
ACGCTCGTATTTCAACAAATGCTTATCATGACGAAGTCTCCAATTTGGAA
TTGCTTGCTGATGAAGCAGACGTTCTTTGACTTTCTGTCCAGCTTGTGTC
AGCCAAACAATGAGATCTTCAGCCATCTTGCCACTGTCAATCAAAGATTA
AAAAGATGCAATAAACCTCTTGAAGTCAACGACGGAGTACTAGCAGATTG
GACCAAGATACCTACCTCTTACTTTCAATTAGGCGCTCCCATCTCTAACG
TTGAAAATGGCAAAACGATAAATTTGGAACACGTTCCACTGAAGCATACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041548XLOC_041548Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066375-exon-scaffold_454-1575043694:63838..64067TCONS_00066375-exon-scaffold_454-1575043694:63838..64067Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1575043694:63502..63570TCONS_00066375-exon-scaffold_454-1575043694:63502..63570Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1575043694:62379..62447TCONS_00066375-exon-scaffold_454-1575043694:62379..62447Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1575043694:53170..53220TCONS_00066375-exon-scaffold_454-1575043694:53170..53220Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1575043694:52660..52818TCONS_00066375-exon-scaffold_454-1575043694:52660..52818Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1510915933:63838..64067TCONS_00066375-exon-scaffold_454-1510915933:63838..64067Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1510915933:63502..63570TCONS_00066375-exon-scaffold_454-1510915933:63502..63570Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1510915933:62379..62447TCONS_00066375-exon-scaffold_454-1510915933:62379..62447Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1510915933:53170..53220TCONS_00066375-exon-scaffold_454-1510915933:53170..53220Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1510915933:52660..52818TCONS_00066375-exon-scaffold_454-1510915933:52660..52818Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1491911889:63838..64067TCONS_00066375-exon-scaffold_454-1491911889:63838..64067Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1491911889:63502..63570TCONS_00066375-exon-scaffold_454-1491911889:63502..63570Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1491911889:62379..62447TCONS_00066375-exon-scaffold_454-1491911889:62379..62447Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1491911889:53170..53220TCONS_00066375-exon-scaffold_454-1491911889:53170..53220Clytia hemisphaericaexon
TCONS_00066375-exon-scaffold_454-1491911889:52660..52818TCONS_00066375-exon-scaffold_454-1491911889:52660..52818Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066375-proteinTCONS_00066375-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_454supercontigscaffold_454:52660..64067 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.480728	0.894309	0	0	0.388973	0.272144	0.443742	0.755399	0.922774	0.536361	0.389634	0.976986	0.63499	0.398435	0.309861	0.326678	0.0817023	0.833495	0.448378	0.553014	0.315621	0.272053	0.220477	0	0.929046	0.829151	0	0.140698	0	0.108725
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066375 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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