TCONS_00066427 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066427
Unique NameTCONS_00066427
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2223

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066427 ID=TCONS_00066427|Name=TCONS_00066427|organism=Clytia hemisphaerica|type=transcript|length=2223bp
ttttatttcatttatttactgaTCAAAAGCTATATTCTCCTACGCATCGA
AGTTCACCATGTACGGAGCACGGTCCGAATGGTGGTGAATTGAGTGAAAA
TGATTACGCATACCAATGTTTTTCCAAACCTTTACAAACTGCTGAATTAA
AAAGTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGATCTGGCAAAAT
GGTGATGGGCTCACCCAACGCTGAAGGCTCTGTACAAACAGTTTCCACAC
TGGCGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCTGGTAACTATGAA
AGTGCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTAC
TGGATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGG
ACCAATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTT
GCAGAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGT
TAAAGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATT
TCATTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGAT
TTAGAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGA
ACTATATTGTGTACGAAGTGATCTTGGAAATCTACTGAAAGCACTTGGTC
GACTTGAAGAAGCTAAGGCATGTTATCTCAAAGCCATTGAAACTCAACCA
AACTTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTAATGCTCAAGG
GGAAATATGGCTTGCCATTCACCATTTTGAGAAAgcTGTTCAAATTGACC
AAAACTTTCTTGATGCCTACATAAATCTTGGCAATGTGCTCAAAGAAGCC
AGAATATTTGACAGAGCTGTGACTGCCTACTTGCGTGCACTAACAATAAA
CCCAAATCATGCTATTGTCCATGGAAATTTAGCATGTGTTTACTATGAGC
AAGGGCTCATTGATTTGGCAGTTGATACTTACAAAAGAGCTATTGAACTA
CAACCAAACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCTTAAGGA
ACAAGGCAAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTCTAACCC
TATGTCCATCACATGCAGACTCGTTAAATAATCTAGCAAACATCAAAAGG
GAACAAGGCAAAATTGAAGATTCCATTGGATTGTACATGAAAGCGCTACA
GGTATTACCCGATTTTGCAGTGGGATACTCCAATTTAGCTTGTGTCTTAC
AAGAGCAAGGACGCCTCAAGGAAGCTTTACTGTATTATCAAGAGGCAGTG
AGAATCCATCCGACTTTTGCTGATGCATACTCAAACATGGGGAATGCCTT
GAAGGAAATGCAGGATATTCAAGGTGCAATCCAGTGCTACACCAGAGCCA
TTCAAATAAATCCTGGTTTTGCAGATGCCCATAGTAATCTTGCATCAGTA
TACAAAGACTCAGGAAATATTGCTGAGGCTATTCAATCCTATAGAACTGC
TCTTAAATTGAAACCAGAGTTTCCAGATGCTTATTGTAACCTTGCACATT
GCTTACAAATAATTTGTGATTGGAATGATTATGATAATCGTATGAAAAAA
CTGTTAACAATAGTTGATGATCAACTTGGTAAAAATCGATTGCCTTCAGT
TCATCCGCACCACACCATGTTATATCCTTTGTCCCCACAACAAAGAAAGG
CTATTGCTAATCGTCATGGAAACCTTTGTCTTGATAAGGTATGTAATGAC
TGGTTTTCAATAACTTGAATTACAGTATGATATCTTTAGTCAcataactt
tgtattgaaaACCCAGCTTCAGTTAAGGTtaagccaattttcattcattg
attGAGTCCTCTCCTGAAGCTTCCAATTTGTGAAggaaattttatgaatt
ttttggacctccatttctttttttttatctcaCAATTGATCACCTGGGAA
TCAATTTGAAAGAATGGCTGGCAAACTTGCTTTATATAATTCACATAACC
TTTTACATAATGAGCATTTTATTTTAGACAAAAATTAGGGGTTGTTttag
aaaatcatgaaaaaactaaatttgggtAGGAACTTATTTTGATGAGACGG
CAATATTTTTAAGTCCACTAAAgtgtagactagtaaactagtcggttatt
acttataataaaactgtcaatca
Run BLAST on NCBI

transcript from alignment at scaffold_455:338460..347055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066427 ID=TCONS_00066427|Name=TCONS_00066427|organism=Clytia hemisphaerica|type=transcript|length=8596bp|location=Sequence derived from alignment at scaffold_455:338460..347055+ (Clytia hemisphaerica)
ttttatttcatttatttactgaTCAAAAGCTATATTCTCCTACGCATCGA
AGTTCACCATGTACGGAGCACGGTCCGAATGGTGGTGAATTGAGTGAAAA
TGATTACGCATACCAATGTTTTTCCAAACCTTTACAAACTGCTGAATTAA
AAAGTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGATCTGGCAAAAT
GGTGATGGGCTCACCCAACGCTGAAGGCTCTGGTAAGTTAGTATTTGAGA
CTGGGATTGCGATTGATGGACTGACGTTATTCCCGAGGGAAGAGTGTGCG
ACTTGGCACTTCCACTTTCGTTTTGAACAAAAGGAGGGGAAAAAACTTGC
GACATGAAAGGGAAGTGGTACGATCACCAGCGGGAATGACTTTTAGATGG
TTCTTATCCTATGCCTACtctaaaaaatttttgtttacactGTTTCAGAC
CTCCCTTAGAAtattattgtttcaaaaagGAAATGAGTTGACTCTGGAGC
TTATTATAAGCTTATTTTTgtgttgtgattttttttgaaatatttgctat
AATTTGCTTTGCGAAGTCCTGAGCCATTTTTTGGGGGCAAATGGGTACTG
TTTAGTATGTCTCAGCATCAGAGCAGTACAGGGAACCTTTTCAAACCCTG
AAAATGTCTTTAAGAGTTGTGAAACCAGCCTTCAGCAGCCTGTAGAAGGT
TCTCAAAATCTGATCAAACAAACTTGTCGAATCCAATCAAACAATtgaac
taatcaaactccatcgaacgattaaagttcaattaaaaaaattaatcaaa
cctaatcaaacactcacaatttttgaagcaatagcagttcgattggttcg
gtcaggaaaaaaacttcgattagttcgatgatattaaatcctcatatctt
cccttgcttgcaaaaactttatcctgccacgcgattgccatttcgacagt
tcccggacttaacaaCTTAAagtttattgtacccggatatttgtccgCGG
CCCCTTTGTTGCGATTTTGCACGCAGCCGAGTGGTGGATTCCTACGCCtc
aacaaaccgcctctggcgctaaaaggatacagggaAAGTGCGTAATCCAT
AATCGGtttaatttcccgatttacattctgaatttggctttgaaaagaag
ctaatatacggtggtggagcagcacaaacttgtcgaacaattaattggtt
tatcgaactgattgaaccgaaacccattgataGAACTTATTAAACACTCA
GGATCTTTTAAtaaatcttagagttcgattaattatTTTAATCAATCTTT
AATCGTTTgatgaagttcgattagttcaattgttcgattggttcgacaag
tttgattgatcgggtctggtataTTCcttgaagtcaggtaacttgcatca
gtggagggaaacatACAtacccctcaaatgaatgacctgtctggtcatta
aaatacaaagttaaatacaaacaaaaatggtagagtagagctgcgagcgg
agctgcatggttcatttgttttgaaatttttctgctttgtttggtcagtc
atttgagggctaatagaccttttttcaaagaggacgtcttGTTGAAtgat
tatgtagtccagccgtaaaaacaatgatagagccatgcataattactgta
tcatgcatattgtaataattatgcatggttttatcattgtttttctgctg
gactacataattattcaacagggtggcctctttgaaaaaggtctattgaa
gtttccctccactgatgatgcaagttacccaacttcacggtatAGAAATG
TAGGGCTCCctaattttaaaatatattttttgggaGATCGTAAAATACAG
TAGTTGCTTCCTCAAGATttctaagccaatcaaaatatgTGCACAGAAAA
CTGTGCTAGCAGTGGCGTTGTGACaagcggagcttttttgaaaggGCGCC
AAAAGAGACTTTTTTAATTGCCCTATCCTTAAATATCATACTTTAGGCGC
CTTAAATCGCGCCCCTGGatcaattttactgagatagttttaaaatactt
gcaatttttttttgctcacttcGCTTGCAATACAGCTAATTGGTAACTTC
ATGCAATCTTTAGctaaatttacaagtttttttgtgtacaatatagcatt
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNagccaaagaaatttttagaatcataatttc
caaaacttcagaaaataacagaagaatgaagaagagaattacaaacaaaa
ttggtgattttatttttgtttgatcTCTTATAAGTAACACAACTTATAAT
AACAAcaacattcgaaaacaatagaatgtcttcatttctctCAAGATTAA
AGATAGGGGATAATGCGCGAAATTTTTTACCCCccccttcataatttttt
taccaagcatagggttaagcatatatagtcgaggctcaaaattgagcttt
acttaagcatagtgagcttcagccgaaatttaccgtatgcttataaaacg
aaATGAGTGTATTGAATGAAAAGttaactgcgccccaagaccaatttgct
gacaagGGGGCTTGGAAGCTTTGGCAATTTGCAAGAgtgttttccattca
tttttggatttctcaacaattattatattttatagTTAGAGATTGTAAGA
GTTTGTGCTTAAAAGGACGAAAAGAGAGGGGGTtgaggaattttcatttt
taagagggGTTGATCTAAAAAAGGGGGTACGCtatcaaaaaatcagaaag
ataaGATCTAGCATACAAATTTTTGTTGCTAGTTTTTTCACTGATTACCT
TTTTCCTCAAATCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTGTT
GCTGAACAATGTCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCCAC
ACTGGCGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCTGGTAACTATG
AAAGTGCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGT
ACTGGATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCT
GGACCAATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGC
TTGCAGAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAA
GTTAAAGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGA
TTTCATTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTG
ATTTAGAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCT
GTAAGTCAAATTTGTACAGATTTCAGCATTCACTGATTGGGGACTTGCTA
AATCATTTTCAGGCTCTTATGTTTGTATGTCATACACTAATCTGTGTAAG
GCTCATTTTCTATATAGAGCCAATTTAttttatgcttatagaaaagtgaa
taaaattttatatacTTTTCAGGAACTATATTGTGTACGAAGTGATCTTG
GAAATCTACTGAAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTAAT
GAGAATTCTTTTATACCTCTTTACTTTATGAACAGTTTTTCGCTTCCCTA
AAGAGAAACATCTGAATCTAATTGCCTCTTTCTTTATTTTCNTAAGAGGG
GGTTGATCTAAAAAAGGGGGTACGCtgtcaaaaaatcagaaagataaGAT
CTAGCATACAAATTTTTGTTGCTAGTTTTTCACTGATTACCTTTTTCCTC
AAATCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTGTTGCGGAACA
ATGTCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCCACACTGGCGC
TTGCGGAAGCTGCACATCGAGAATACCAAGCTGGTAACTATGAAAGTGCT
GAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACTGGATG
CCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGACCAAT
CTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTGCAGAA
GCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTTAAAGA
TGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTTCATTG
ACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATTTAGAG
GGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGTAAGTCA
AATTTGTACAGATTTCAGCATTCACTGATTGGGGACTTGCTAAATCATTT
TCAGGCTCTTATGTTTGTATGTCATACACTAATCTGTGTAAGGCTCATTT
TCTATATAGAGCCAATTTAttttatgcttatagaaaagtgaataaaattt
tatatacTTTTCAGGAACTATATTGTGTACGAAGTGATCTTGGAAATCTA
CTGAAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTAATGAGAATTC
TTTATACCTCTTTACTTTATGAACCGTTTTTCGCTTCCCTAAAGAGAAAC
ATCTGAATCTAATTGcctctttctttattttctatGGTTCCAAACAGGGT
ATCAACTGTGAATCAACTACATGGAATCCTCAATGATGCTGTTTATCCTG
ACCAGTCACACATATTTTATCTTAGCACTAGAGGATTGTGAAAGCTATTA
CTAGAAAAACTCTTTCTCACTAGACCTAGAACATCTAATGACTAAATCTT
AAGTTAATAGCCTTTTCAATCTTCTGATAATAACTTGTGATTGTTACATT
GGCCATGATTATTTTTCTTCAATGAAGGCATGTTATCTCAAAGCCATTGA
AACTCAACCAAACTTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTA
ATGCTCAAGGGGAAATATGGCTTGCCATTCACCATTTTGAGAAAGTAAGT
TTTGTCTATCAGAGGGAGTTGGTACTCAAATCTCAGACATAGTGGTGTTG
CAAAAGGTGGAATGCAAAATACaaagatttgagattttttttttgaaaaa
acttttgtaCTCATTGACTATTTGACAAATTCAATTTGTGCCAAAAAGGG
TTTTTGCATTGCATCGGtgtcaaaatgttttgaaagaatTGGTATAATTC
ATGTGTACTAAAATGCCACTTTCTAAatctttgggggggggggtggtatg
taaaatattctcaaaatcCCCTTTCAGCAACACTTATCTAGGTCTGACTC
TTCCTGTCTATAAATTAATCGTATTCCCTGTCTTTTTCTATCATTGAAGC
TTTTGACATTAACAGATTCTGTGAATTAAAGCTCCCATTTCTCTTGTTTG
CCAATTCATATTGCATTAGGAAGTGAcatacattttatttttataagcaa
gtgtatgccccttggtcaggctcaaGTATgattaagttctcaaagcatcc
aggcatagtttatgcttattatatgctgatgaatcatgcttatgattcac
cttgagccaagtttttagtgaaattacAGAAATGtcgtaaaaatttgttc
atatTTTGGGAGCAGtcgaatgtagctagccgtggaatttcttttttttt
tacttgacctctctaccaaacctttttaaacagataagaAATggcaactt
gaaaaatatttcaggctgacacaTATGCTTATGCTATGCTTAGGAATTca
gcaaatctgagccttcatatgcttataagcgttctgcttataaaaaaaaa
acatgtagtgtcCTGTCCtcatgattgaaaaattcaGTCTGCTTTTCTAA
Gcatctttgtttacattaacccattttcgttctattttgtctagtattcc
ttttgcaacaaaattttacgtttgtgtcaggttgacatttgagaaatttt
tatgGGTATATTGGaggaactgatattttcagaattttttggggggaaat
CAAAAAAGGGGGCAAACAAAAAAACTGTCATAGGAGAAaaaagaatttgg
tggggggaacaaaccctggagtgAGTGGGTAAAACCCATGTTGTTCACAA
AGAACCTCATTAAGGCTGACTTTATCAAGATCTGTATCAGATAACTAATT
TTACCCCATTTTCAGTTCACATTtacttttctttgaaataacTTCAGCCA
CTTTTGAAACGCCTCaagaaaacagaaaatgaaaagttttgaaaattatt
tttcaggcTGTTCAAATTGACCAAAACTTTCTTGATGCCTACATAAATCT
TGGCAATGTGCTCAAAGAAGCCAGAATATTTGACAGAGCTGTGACTGCCT
ACTTGCGTGCACTAACAATAAACCCAAATCATGCTATTGTCCATGGAAAT
TTAGCATGTGTTTACTATGAGCAAGGGTAAGAAAtcttttccaatatttt
ttcatttcttaatCCACACATTGCTTGGATTAGTTTCCCTGTAATAATGT
GACACCTACTTCCAGGTTGGCCACCCTTTGCTTTGTCCAAAGTAATTTTA
TTGCAGCTGTTCATAGCTCTTTATGATTTGAAGGATGGATCAACTATAAA
GTGAATTGTTTTAGTTCTGTTTATTATGACAGCATACCTATCACATGCAG
CTACATTTAATCTTTGAGCATCAACACTGTCACTTTGAAGACTTATTGCT
GACAGAAATCTCACAAATTTAGTGAGCAAAATTGTCTTATTCATTTTCAG
GCTCATTGATTTGGCAGTTGATACTTACAAAAGAGCTATTGAACTACAAC
CAAACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCTTAAGGAACAA
GGCAAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTCTAACCCTATG
TCCATCACATGCAGACTCGTTAAATAATCTAGCAAACATCAAAAGGGAAC
AAGGCAAAATTGAAGATTCCATTGGATTGTACATGAAAGCGCTACAGGTG
AGCCTAATAAACTATGTAATaagattgaaaattgatttcagattttttta
catattaGACAGAAAGGGTAATTGAGTTGAGGGTGTGGTTAACAATACCC
AATTTATATTTGTCACAGGTCTTTCCAGAGTTTGCTGCAGCCCACTCTAA
TTTAGCAAGTATTTTACAACAACAAGGAAAACTCCACGAAGCATTGATGC
ATTACAAAGATGCAATAAGGTATTTAAAATGATTGTGTAATGCACCTTAT
TCATTTTCCATAAATACTGTCCTCTTGCAGGTATTACCCGATTTTGCAGT
GGGATACTCCAATTTAGCTTGTGTCTTACAAGAGCAAGGACGCCTCAAGG
AAGCTTTACTGTATTATCAAGAGGCAGTGAGGTATTGTAATGGCATTTTT
TAATAAGCTGAAAGTTTTTCTCTTACATGTCCAATATAACCTTTTATTAC
AAGTTTATTTTTTGTAAGATTTAATTTGCTTGTTTTGTTTCTACTAAAAT
GACACCTTTTAAAATGCTAATGTAATGTGTTTCTTCTCATTTGAAATAAA
CTTTTTTTCAACAATTTTATTTCAGAATCCATCCGACTTTTGCTGATGCA
TACTCAAACATGGGGAATGCCTTGAAGGAAATGCAGGATATTCAAGGTGC
AATCCAGTGCTACACCAGAGCCATTCAAATAAATCCTGGTTTTGCAGATG
CCCATAGTAATCTTGCATCAGTATACAAAGACTCAGGAAATATTGCTGAG
GCTATTCAATCCTATAGAACTGCTCTTAAATTGAAACCAGAGTTTCCAGA
TGCTTATTGTAACCTTGCACATTGCTTACAAATAATTTGTGATTGGAATG
ATTATGATAATCGTATGAAAAAACTGTTAACAATAGTTGATGATCAACTT
GGTAAAAATCGATTGCCTTCAGTTCATCCGCACCACACCATGTTATATCC
TTTGTCCCCACAACAAAGAAAGGCTATTGCTAATCGTCATGGAAACCTTT
GTCTTGATAAGGTATGTAATGACTGGTTTTCAATAACTTGAATTACAGTA
TGATATCTTTAGTCAcataactttgtattgaaaACCCAGCTTCAGTTAAG
GTtaagccaattttcattcattgattGAGTCCTCTCCTGAAGCTTCCAAT
TTGTGAAggaaattttatgaattttttggacctccatttcttttttttta
tctcaCAATTGATCACCTGGGAATCAATTTGAAAGAATGGCTGGCAAACT
TGCTTTATATAATTCACATAACCTTTTACATAATGAGCATTTTATTTTAG
ACAAAAATTAGGGGTTGTTttagaaaatcatgaaaaaactaaatttgggt
AGGAACTTATTTTGATGAGACGGCAATATTTTTAAGTCCACTAAAgtgta
gactagtaaactagtcggttattacttataataaaactgtcaatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041563XLOC_041563Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066427-exon-scaffold_455-1491911889:338460..338691TCONS_00066427-exon-scaffold_455-1491911889:338460..338691Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1510915933:338460..338691TCONS_00066427-exon-scaffold_455-1510915933:338460..338691Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1575043694:338460..338691TCONS_00066427-exon-scaffold_455-1575043694:338460..338691Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1491911889:341544..341959TCONS_00066427-exon-scaffold_455-1491911889:341544..341959Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1510915933:341544..341959TCONS_00066427-exon-scaffold_455-1510915933:341544..341959Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1575043694:341544..341959TCONS_00066427-exon-scaffold_455-1575043694:341544..341959Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1491911889:343074..343142TCONS_00066427-exon-scaffold_455-1491911889:343074..343142Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1510915933:343074..343142TCONS_00066427-exon-scaffold_455-1510915933:343074..343142Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1575043694:343074..343142TCONS_00066427-exon-scaffold_455-1575043694:343074..343142Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1491911889:343487..343603TCONS_00066427-exon-scaffold_455-1491911889:343487..343603Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1510915933:343487..343603TCONS_00066427-exon-scaffold_455-1510915933:343487..343603Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1575043694:343487..343603TCONS_00066427-exon-scaffold_455-1575043694:343487..343603Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1491911889:344866..345035TCONS_00066427-exon-scaffold_455-1491911889:344866..345035Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1510915933:344866..345035TCONS_00066427-exon-scaffold_455-1510915933:344866..345035Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1575043694:344866..345035TCONS_00066427-exon-scaffold_455-1575043694:344866..345035Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1491911889:345360..345606TCONS_00066427-exon-scaffold_455-1491911889:345360..345606Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1510915933:345360..345606TCONS_00066427-exon-scaffold_455-1510915933:345360..345606Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1575043694:345360..345606TCONS_00066427-exon-scaffold_455-1575043694:345360..345606Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1491911889:345890..345990TCONS_00066427-exon-scaffold_455-1491911889:345890..345990Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1510915933:345890..345990TCONS_00066427-exon-scaffold_455-1510915933:345890..345990Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1575043694:345890..345990TCONS_00066427-exon-scaffold_455-1575043694:345890..345990Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1491911889:346185..347055TCONS_00066427-exon-scaffold_455-1491911889:346185..347055Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1510915933:346185..347055TCONS_00066427-exon-scaffold_455-1510915933:346185..347055Clytia hemisphaericaexon
TCONS_00066427-exon-scaffold_455-1575043694:346185..347055TCONS_00066427-exon-scaffold_455-1575043694:346185..347055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:338460..347055 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00066427 vs. Swiss-Prot (Human)
Match: OGT1 (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3)

HSP 1 Score: 902.894 bits (2332), Expect = 0.000e+0
Identity = 421/525 (80.19%), Postives = 480/525 (91.43%), Query Frame = 1 
Query:  217 NAEGSVQTVSTLALAEAAHREYQAGNYESAEKLCMQWWRRETDSTGCLLLLSSIHFQCRRLDQSAQFSQLAIKQNPMLAEAFSNLGNVLKEKGQVKDALANYRHAVKLKPDFIDGYINLAAALVTAGDLEGAVQAYATALNYNPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQIDQNFLDAYINLGNVLKEARIFDRAVTAYLRALTINPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAYCNLANALKEQGKVEESEECYNTALTLCPSHADSLNNLANIKREQGKIEDSIGLYMKALQVLPDFAVGYSNLACVLQEQGRLKEALLYYQEAVRIHPTFADAYSNMGNALKEMQDIQGAIQCYTRAIQINPGFADAHSNLASVYKDSGNIAEAIQSYRTALKLKPEFPDAYCNLAHCLQIICDWNDYDNRMKKLLTIVDDQLGKNRLPSVHPHHTMLYPLSPQQRKAIANRHGNLCLDKV 1791
            + E + + +S   LAE AHREYQAG++E+AE+ CMQ WR+E D+TG LLLLSSIHFQCRRLD+SA FS LAIKQNP+LAEA+SNLGNV KE+GQ+++A+ +YRHA++LKPDFIDGYINLAAALV AGD+EGAVQAY +AL YNP+LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAV +D NFLDAYINLGNVLKEARIFDRAV AYLRAL+++PNHA+VHGNLACVYYEQGLIDLA+DTY+RAIELQP+FPDAYCNLANALKE+G V E+E+CYNTAL LCP+HADSLNNLANIKREQG IE+++ LY KAL+V P+FA  +SNLA VLQ+QG+L+EAL++Y+EA+RI PTFADAYSNMGN LKEMQD+QGA+QCYTRAIQINP FADAHSNLAS++KDSGNI EAI SYRTALKLKP+FPDAYCNLAHCLQI+CDW DYD RMKKL++IV DQL KNRLPSVHPHH+MLYPLS   RKAIA RHGNLCLDK+
Sbjct:   11 STEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKI 535
The following BLAST results are available for this feature:
BLAST of TCONS_00066427 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OGT10.000e+080.19UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
back to top