TCONS_00066552 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066552
Unique NameTCONS_00066552
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066552 ID=TCONS_00066552|Name=TCONS_00066552|organism=Clytia hemisphaerica|type=transcript|length=1298bp
gaaaagtTTATGATTTTCTACAATTTTGTTTTGTCTAATAATACTGAGTA
CTGTATAATCGTATAGGTATCAAATGGAAGAAAATGAAGTGTTTTGAAGT
AGTTTCaaatgttCGATATGTTAACACGACATAGCCGTAATCGATATCGG
ATCATTGTTCTATCCTTAATCTTCGTCACATCAATATACGTTTTTCTTAA
TAAACGTAATTGGGCATGGTACAATCGGTCTAGTGGGGAGAGTATTTGTG
AAACACCAGAGCCTGAAATGAAGGACTTGATTGCACTAGCGACTGATACC
CGTGACGTCTTACACGGACTGAAAATGACGTATTTCTTGATATATGGCAG
CCTGTGGGGCGCATTACGACACAATCGACCACTAGCCTGGGACAACGATT
TCGATATCGGTTTAGTTTACGAAGAACTAAAAGATAATGGATTAGaacaa
aaactttataaagaacttcaaaagaaaaatatcaaaatttattatcGGTT
ATGGTTCGGTACCTATCGGGTTACTCGGGATACCGCACGTGGTGATTTGA
TGATATACCGACGAAACTATTTTGATACTTGTGTACGGTTAGGTATGGAG
TCGTGGGTTTTCTTTGTGAATTATCGTAAGTATCATCAATTCCCATGTCG
ATTGATTAAGAAACCATTACCTagtatgaaattttcaaaagtgaaCTTCA
CGGTACCGAGAGAAggaaatgaaattcaaaaacatttttatccaGAAGAC
TGGTGGGTTGAAAGTAAACCATCTGGTTGTTGATGATGTTGATGAAACAT
TCAGAAACATTCTACGATTTTAGCTTCTTGatttttcaatgaatttaaGA
CTTGAAAATGTTCAAGTATCATATGCCGGAGCAACACTGTTGTTATTCCG
TTGTTGCTAGATTTAGTTAGTTTATATTAAGTNCGGAGTAACACTGTTGT
TATTCCGTTGTTGCTAGATTTAGTTAGTTTATATTAAGTCcgaacttgat
ttttcaaaatgtgaaatGAATGATTCTCTGATATAATATTTGGGCGAATA
TTAAACGTCGTCGAGTCAAAGcacatttaagggctctgaccatagtcgaa
aaattgattttagtatttgaacataaaagttatgtttaacacttttaaca
aagaattgcctttacaaattgcttaagagtaattaaaaatttaattacaa
aaatgacgctatgaactttaaaaagacgttaataatatgttgtattacct
tcttttataaaaagtgctaacttttgatagtttttttcaaactgttcg
Run BLAST on NCBI

transcript from alignment at scaffold_456:442634..455929-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066552 ID=TCONS_00066552|Name=TCONS_00066552|organism=Clytia hemisphaerica|type=transcript|length=13296bp|location=Sequence derived from alignment at scaffold_456:442634..455929- (Clytia hemisphaerica)
GAAAAGTTTATGATTTTCTACAATTTTGTTTTGTCTAATAATACTGAGTA
CTGTATAATCGTATAGGTATCAAATGGAAGAAAATGAAGTGTTTTGAAGT
AGTTTCGTAAGTTATTTAACTATGTTTTTACATGACCAGATTTACCAAAA
TCGTCGTATTCACTTTCGACAGATTCGACAGATTCAAATCGAAAGTAGTA
CCAGAGCCAACCTGAATCGAACGGCGCGTGACCCAAACATAGTGTGGACA
ATAGCTATTATTGAAAAATATAATAATGGGCTCTTCCAGGAAAAACTGTG
TCGAGGGTGTATATAACATTTTAGTTGTTTTATATGTAGATTTAAACGTG
TAATGTTAATTTGCATAAACGACTGGTAACAGCGAGTGTTGCGACCTTGT
GAGACCTCTAACCGGACACGCAGAAGTCTGTGTGTTGACTTTTCAGCCGA
AAATCTGTAACTATGGTGTTGAAAAAGTTAAAACTTTCTATTTTATTGTA
CTTTGAAAAAATAAAAATATTTTCTATTTATTTTGTTGATAATTTTTTCC
CGCGCTTTTTCTAATTTTTTTTCTAAAGTTTACAGACTACATCTTTCTCT
TGCACAAAACATAAACACTCGACATTCACGGTTTGTGTAAACCGCAGGTT
ACAGGTCGCAGGTTACAGGTCACAGGTTACAGGTCACAGGTTACAGGTCA
GAGGTTACAGGTCAACAAAGTGCAGACCGGAAAAAAGATAATAAGATCAT
AACATATACATAACATAACATCAATACATAACGCATTAAATTACAAAAAA
GTAATATAATATACATGTTATTTAGATATTATAAAATGACAATTGAAAAG
AATAACAACCTAGTGACACTTACTTACAAAAATAATGACAAAATCATAAA
AAAATAAACAAAATCGAAAAATATTTATTAAACAAAATGTGATGTGGATG
GTGTGAATGGATAAAAAATGGCACCAAACAGAAGCTTGCAAGGTCCCTAA
GAGAGTGGTTTTAGAAGGATGGAACTAATTAATTACAGTATTCAGTTATT
ATTTTAATGTCTTAATGACAATTTTTGACAAAAATATTAACAGAATCATA
AAATCTGATGCAAGAAAAGACAAAAACACGAAAGATATTTATAATACAGA
ATGTGATGTTGATAGTGTGAATGGATATAAAACCAGTGGCGGCCTGGCAG
GGGGTGCAGGGTGTGCAGTGCACCACCCAGAAAGACCTGAGAGGGGCGCC
AAAAAAGTTTTTCAAGGGGGCGCCAAAATTTTTTTTGATGTTTGGTTGGG
CGATTTGACGCCCTTTGACACGTTTTTAGCGCCTTCTATAAGTGCAATGT
AAATTTTTTTTCGCCTGCGGCGCTTCGTTTTATTTTACGAATTTTTTCAA
AACTACTATCAACATTGAATTGCGAAAATTCAAAGCAAGAGAAGTGTTGT
GTATCCACCAAGGGTTAAAGAGGATGCTCACCCCCAAAATGAGAGATTGA
TCGAAACTGCTCGCTGTGGTTTGTGTGGTCTTATGCGGACTAACTTTCTC
CTTTTTTGAATATCTTTTAAGCTGTTTGACCTTTCTTACACCAAATTTTT
TTCCCTGAGGCCAGAGTTACTAAGAACCCTTATTCCTGCCAACTTTCGGA
ATTTTACGGCCTAATTCAGCCATTGATCTTTAATGGAAAGTAAAGTAACA
CCAGGAAATAACAAGGAAATAGATATCAAGTTATCATTACCACCACCTTC
GTATAAATAAAAGTTGGTTAACTCAGAGATTCCGGGCGTTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNACGATAACAATATGGCTGGATATAAAATTACACCAATCAGAAGCTCGT
GAGTTCTCTGAGAAGGTAGTTTTAGAGCGATGTGTTTTATTATATGTACA
GAATGTGGCCCCCAAAACGGCGAACAAATTTGAAATTTCTCTCAAATCTA
GAGGAAAAGAGATTTTACAAAAATTTTTACTGCATTAAAACCTTTAACAT
CTCTTCTTTATTTCCTGGAAGTTCTTTTTCAAAATTTTCAATTTCAACAA
TATTTTTCAATCGCTTAAAGATAGGTAGCTTTTTTTCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAATCTGTCTCAAACCAGCA
AAAACATGCTCATTTTTAAGTATAACCATCATTCTTTCAAAATAAACAAA
AATCGTTTAATTCTGATAAATCTACAACCTCCGTTTTGGGGGCCGTCTCT
GTTTCGGGGGCCATATACTGTAACCATCATATAACATTACAAACATTACA
ATATGTAATATACCTGTTATACGTATAATATGGTTTCAAATATTTTCANA
AGCAAAAATTTAATTCGAAACCCGTGTATTAAAGGTTTTCTTTTTACATA
AGTGTTTCCGTTTCATATCAGACACATATTTCATATCAGGACAGTGTCTT
GCTATTGTTATTGGTCCAGCGCGCAGCAGAATGGACCTTTAAAAAGCAAC
TGATCGAAAAGATTTTGTCTTTGTCGGAGCCTGCGCGCGCAATGAATTAA
TTAAGTCCAGGCTAAACCAACCGCCGATCTAGAATTTTTGCCCTGCCTAA
NGCGAAAGATCGATAAAAGCACATGGTTAAATTTTGATGTTTGAAATGGT
TTTATATGGATGAAATTGCTTGAGAATTATGTTTTTGATAATAGACCTTT
TCATAAATTACGTCACGAACATCACTTGCCTCGTTTTGAAATCATTGCCA
TGGTGGTTAACTCCCAGTGGATTGTATTAAAACTACTTTCTATTTATATA
AAAATTATTTAATGTCTCCAGGGACATAATCACCATGGTAATTGATTGAA
TATGAGGCAAGTGATGTTCATGACGTAATTTATGAAAAGGTCTNGGTAGT
AGAGTCAAATTTCCCGGTTAGATTAAAGGGTTGTTTCAGGTAGGGTCAGG
TAGGGTTAGGGCTAGGGTTGGGGATGGGAGTTAACCACTGGTTAGGGTTT
GGAGTAAATACCATGTTTATAAGGAACTTTGAACTCCTCAATGCAGTTGT
GACTCGATGGCCGAGTGGTTAAGGCGCTGGCGTTCTTATCATAAGTGCTT
TGTATATAGTGGGTTCGAATCCCATCAACTGCAAAAGTTTCAAAATTTCG
GGAAATGCATCAAAAACTCTCTCATCTTAGCTATACAAGTGTCAAAGAAT
AGAAGCTCAGAGTGGAGGATGGGAAGAAAATTTTTTTGCGTCACTTAAGA
AGGAACCCGGTACGAACAACATTCGGTTATTGCCACGTCAGCTGGACCTT
CACGCCGCTCTGGCTTCTTGTATTATACTGATATAAGCAAAAAAATGTTT
TTCTTTTCCTCTTTCTGTCCAATCTTGCTCCACATCCGTGTCAAACCAAT
GTTAAAAAGCTTGTAAATTAAAATTGATGAGTAAGCAAACGATATCACTC
TTATTTAAAAACAAAACCTTTAAGATAACAAATGATTCTTTGACATTACT
TGAAATCCAGTTTGCAGAGTGTGGCACGTTTACACTTGCTTTTTCTCGAG
TGCACAACTCGGAAGAAGTCGAGTGCAGGTGCAAAATTTGAGGTTTTCAG
GTGCTAGTGCAGACGGTTTTTAACCCCAAGTGCAGAGTTCCGCAATTTTC
TCCTCAGATGTAGCTAATTTTTGCAATTTTTGCCTTTTTGGGCCAATTTC
CGAGGTATAGGTGCACCTTGTCTGGACCAAAATTTATCAAGGGCGCTCTT
CCAGAGCGGAACTTGGTATTTCCGAATTTTTCCTCGAGTGCAGCCTTGCC
ATACTCTGCAAACTGGCTTAAAATTATCAGGGGCATAGAGATATTCTGAA
GTTTCTAAAGGGATTAAATTTTAATTTTATTTCGCCAACATTCACTTTAC
GGTATATAGATTAATTTTCCTAAGTGCAACTCCATTCTTTTTTCGTAGAG
TTTTCATTACAAATGTTGCCATTCTTCCAGAGGATTTGCACAATTTTAAC
TATCCCTTTGGCTTGAAAAGTTTCGTCCACCTCTGAATCCAGGAGAACAA
TAGTCCGGGGAAACAAAGACACCTCAGGCTAAGGCGAGTTGCCAGTCCGA
GGTTGTGTCACAAAAACAAAAGCAAAAGTCGAAAAGTACTCTCGGGTACC
TAATAGCCGCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CCCCCCCCCCCGCTTATTCCAATCCCCCGTCTATTAGGTACCCGAGAGTA
GTCCCTCGTAGGGTACTTTTCTTGCTATATTTTGGGAGAAATTAGAACCA
GGCCAATCGGCTACTGTAAGTCCCCTTTAAATCACGGGGGTTTTTGGAAT
GAAAAAAATGCGGATTGGTTTACACATTTTTTATAAGAGATATTCTACAC
TGGTTTAAGATAAATGGGTTTGTTGCTAATCCGGGCAAGATTCAAGTTAT
GTTTCTCGGTAGATTTGAACCTATACAGAGTGTTACTATAGGTAATATCA
AAGTCAAAGTTAAAAATCAGGTTAACTATTAGGTATCTATATTGATGAAA
AACTACACTTTAACTCTCATGCTGAATTATACCAAATACCAAAAGGCGGG
AAATAAAATCAGCACACTTAGACGCATCCGCCCCTTTCTTTTTCTGAGAA
CGGCAAAGGCTTTAGGTCACGCTTATATATTCTCAAACTTTAACTAGTAT
CCGCTAATCTGGATAAATTTTGTAAAACACAACAATAAGCAAATTCAGAA
AATTAACGTAGAGCTTTGGCTGTAGTTCATCAAGATTATGACTCTAATCT
ATCTCAATTATTGACTATATTCTAAAACAGCATCTTTTCACATCAAGTTC
ATCCTTGAAGAAATCTATAAAACTTTGAAAAAACAAAATCATTTATTTCC
AGCTAAACTATTTAATATTAAAACTTCTGGCTTCAGTCTAAGACGAGAAA
ACAGCATATGCTACCTACAGCAAACACCGTCAAGTTTGGTTTGCAATCTT
TGTGTTTTGTCGGATCTTTATTAAAAGTGTTACCAGAGAATTTTTGTACT
TTGTACCCATTATGCAAATTGTAGTAAATAGGTATTTTTATTTTAAATAA
GTTGGATTTTATTAGTAAACGGGCACGGCTGTAATTATTTAGGACATTGG
GTCCTATCGTTATTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCTT
TGTCCGTTCGTCTGTTCGTTCGTTCGTTCGTTCGTTTGTTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTCATGATTGGCTC
GTTAGTTTTTTCTGATTTTTTGCACAAAGATGCATAACTATAAACCCTCG
AATGTGACGGAGCCCGATTTTCAACAAAAAAAATTTTTGGGAAAATTTGG
GCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTAGG
TCGTTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCGTAGGT
AAAAGATGACTTAAGCGAATTTTTGCAAAAAAATTTTATTGGCTCAAAAA
ACGCATGTTTATCTATAAGAATTACTATTAATAAGCATACATCAATGTTC
TTAGTCAAATTACTCAATTTTTTTATGAGATTTTTGCTCAGGAGGGCTTA
CTTTTAAAGAATATGTGTGTTTCGACATGAAATTTTGGTTGCTTGGCGTG
TTTTTATAAAATAACTGGCCAAATTCGATATTTTTTTATAAGCACATTAT
CAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTTATTCTTTAT
GATTTTTTGAACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGC
CCGATTTTCAAAAAAAAAAATTGGGCAAATTTGGGCCAAAAAACGGCTAA
AAAATGGGTTTTTTGGACTTTGTGAATTATTGGATCATTATTTTTTTCTA
ATTTTTTGTATGAAAGTAGGATACCATCATAGGTAAAAGATGGCTCAAGC
AGATTTTTGTAAAAAAATTTTCTTGGCTCAAAAAACGCATGTTTATCTAT
AAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCC
TTTTTTTATGAGATAGATGTTTTTTTTTGCTCACGAGGGCTTACTTTTAA
AGAATATATCTGTTTAGACATGAAATTTTGGTTTCTAAACGTGTTTTTAT
AAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAAT
GATTGTTTGATGGTCACGCTTATGTAGATATCAATTATACATGTGTTAAA
TGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTACCAACTGAAAAT
AAATTGATAATAATTGCCCAACAGCGGCTTTTGTTGCTTCACGTAGCGGG
CTTGTTCGCCAGAAAAATATTCATGATGTCGATGTTGTTTCTTCTGATTC
TGAGCGGGCCGCCTCGGTTAAAAAATGCTCGCGCGCACCTATTGTTTTAT
CTATTTTGTTATCTGGCACCCAGATGGTGAAATTTTTATCCGACACGCTA
AAGCTCTAAAGGTCGGAAAATATTTTCTACATCTGGAAGGTTATGATTAG
TTCCATTTATACTGAGACGGAAAAATCGTCTGAAACGAGTAGTTTGTAAA
ATGTGATCTGTGGAGGAGATCCTATTTATTGAAACATGAACGGAAAGTAC
ACTCCTCCTTAATGTTCGTTTTCTAAATTGTTTGTCTCAGACAAATTAAT
CGTCTCAGTATAAACATGGAGGTAATAAAGATATAGATGGAGAGAAAACG
TCTCGGTAATGAACTAAATTGTCGTTGAAATCTTTTATGAATCTATTCAA
AGCGGCTTTTCTTTGATGTACCATCATTTTTGGAAGCAAAAAACATCAAT
TTATAACTTTATAAGAACAGAAGGAGACTGTTTGGTTGATTTTGAAAAAC
TTAATTTTGCCGAAAATCCTTGTTAAAATGCGATTCGAAATAGTTTCAAC
TGATGTAAGACTAAAAGAGTATATTAATTTCATAAGGACACATTTTTGGG
CTGGCATTTTGTTAACATTGAGAGTTGCATCACATTATCATTGAAAGTTT
CTTATTATAAGATCTTCACGTTTAAGTGGGCAGCGGTTTTCATACTCTGA
CAAAATAATCGATACAAGGTTCCTAATCGTAACACCTAATTCTTTTTTAA
ATCTATCGATGGCTTTAAGGGCAGCTTCCCCTAGAAGTTTGGAGTATTTT
GCTTATTATGTGAAGTTTTTTTCAATTTTTCATGACAAGGCTATTATATT
TCAATATACTTGTTAAAAATGTAATGTCTTTTCATTCATCTTAAATATTC
CCACGAGTATACCCAAAATTAATCATCTTATTCCCAAAGCAACCAAACAG
CTGTTTGCTTCCGATGATAAATCAGAATAGAACAAAAGGCATTGACTCTC
CATCTATATTTTTATTACCTCCATGGACACAGCTGATTGGCTTAGGTTTC
GAAACTCTCTATTGTTTCATTAAAACCTCAGTGTCCATGCGATTTATCCG
GAGAATTTCAATATTCAAACCAAGAGCAGTGCTCATCCCGAAGAGAAGGA
GTTTTAAACGCTCGAACGAAGGAAGATATGACGTAGCCTAAGAAAAATAA
AGCTTTCAGTGTAATTAATTTCATTGTTTTCATGATACTGGAAAAAAAGT
GCTGAAAATCATTACATGTTTTTTTCTTTTTTAAGCATAACGTTTATAAG
CATATACAGGCTCAGTTTTTGGTACCTAAACAATGACTCTATTGTTTGAG
AACAATAGAATACTAAGCATAATGCGAGCCTGACATAGGGACAGACACTT
GCTTATAAAAAAAACATGTATGAGATAAGCTCGTAATTACATGATAGCTC
GTGCAATTCAAAAATTTACACACCAATTCTTTCCGGATAATTCTTGTGAT
TACATAGTATAATTGGCTCGTTTAAAAGAGCAGTTTTTCAATATGAATCA
TGCTGCTCTATTGTCCTCGGGAACGACAATTTATATGTCAATGTTTTGAA
TGGTACAAATTATCGCAGTCTTATATTGAATGTACTTGTAAGCATTTGCT
TATGTATATATACGTGTCGTTGGGAAATAAAAAATGAAAGACGAACGTTC
GTTGACAGTCAAAGATTCAAGTTAGTTTTATTTATTTTTGAGTTTCTCAA
AAAGTCTTTCAATTTCTATTCATTGGGTAGTATATGATGGTCTAGGGCTC
ACATTTTTTAATTATATATTTTTCACCGGTTATAAAAATGAATATCCTAA
GAATTTTCTACCAATGTAGTTTAGCCTTAAAAACTATAGCTAGAGTGTAG
TGTAAAACAAAGGCAAAGTTTCTCCACGCTTTCAGGCTTGCACCAACACC
TTCGAGAAAAGTTGTTGTTGTGCCAAAAATGAAAAAACGGTTTTCATAAT
TGCGTAACTTTACTAAATACACGCTTTTTTTTATAAGAATGGTGTAAATC
CATTTCATCATGGATATTCTTAACTTTTTTGGGGAAATCATCCTAAAATA
TTGTTACAGCATTCTTAGGTTAGGATCCTAATTCAGACTAGATTTAACAT
TTAGTACATACGTCTCAAGCAGAAAATGGCATTTTTGTGAAAGAAGTGAA
CCTTACTTGAGGGCAATTGACAATTTATAATCGAAAATACTCTCGGGTAC
CTAATAGCCGCCCCCCCTGCTAATTAATTTTTGGGAAAATGTTTTTGAAA
GTTCCCTCTTTTGTCCTAATTCAGCTGTATTAGCCTCCATTTCAAAAATT
TTCCACCCAGGACATTTTTATTCCAACCCCCCCCCCCCCCCTCTTTCTTT
TTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCACTTATTAAGTTTTGAGATTTTTTCCAACCCCCCGGCTATTAGGTA
CCCGAGAGTAGGTTGTTTTGAGGTTTTGGCCAATTTTCAGTTTCACTCTT
AGTTCTTATAAAAAAAGCGTGTATTTAAAGTATTGCAAAAGCAATCTTTC
CTAACTCCTAACATTTTATCAACATCACATTTCATAAATTACGTCACGAA
CATCACTTGCCTCGTATTCAAACAATTTCTATGGAGATTATATAGGAAGT
AGTTTTAATAAAATCCGCTGGGAGCTAATCACCAATGCAACAATTTCAAA
ACGAGGCACGTGATGTTCGTAACGTAATTTATGAAAAGGTCTATTCTTTT
CTTTTTTAGAAATGTTCGATATGTTAACACGACATAGCCGTAATCGATAT
CGGATCATTGTTCTATCCTTAATCTTCGTCACATCAATATACGTTTTTCT
TAATAAACGTAATTGGGCATGGTACAATCGGTCTAGTGGGGAGAGTATTT
GTGAAACACCAGAGCCTGAAATGAAGGACTTGATTGCACTAGCGACTGAT
ACCCGTGACGTCTTACACGGACTGAAAATGACGTATTTCTTGATATATGG
CAGGTATGTTTATTTGAAGTTTTTCTCTCTGATGGTATTGAAACTTTTTT
CGGATTGTTATTGTAAGCTTATTTTTTATAAGAAAGAATATTTTTAAAGC
CTTTGGATGTTCTTAACTTTTTGGGTTTTATGCCTTAAATGTGATCATAG
TCCGTATAAAAAACCCCGGTCTGGAAGCCTTTTGTTTCTTTCTATTGAAC
TTGAACTTGCATTGAGAAATTATTTTATTTTGCTCACTTTTTGATCATGT
GATTAACTTTTGAACCAATCCCAAGAGGAGTATTGGTAATGTGATCCAAA
ACTGAGCAAATCGATTTTTATCTTTTGAAATTATCAACAAATGAAAAAGT
TAATAAATAGTTACACAAAAGGCTTTTAGACCAGGGCTTTTTATACGTTC
ATAGTTAGAGGGGGGGGTCTTAGGTTTTGATGAACCAAAAGCAAGGGGGT
GCTAAAAGTATGACTTTCTTAAGGGGGGTTGCCAGTTAAGGGGGGTCTTT
TTACCTAAGGGGGGTCTTCTTACCTAAGGGGGGTCTTCTTACCTAAGGGG
GGTCTTCTTAGATAAGGGGGATCTTCCTTGAATTATGACTCTTGTACAAT
CGTTTCATTTATACTGATTTTCTAAGGGGAGGGTGTAAAATTTTAAATGA
ATTTCATAAGGGGGTTAGCACTTAATGGGGGGTCCTCTTACCTAAGGGGG
GGGGTCTTGACCCCTCTAGAAACTATGAATACGGACTATATGACGTGATA
AAGTGATGTCACTGAATCCTGATGCATGGTTGTGTTCAAAAAGTCAATAC
TATAGAGAACAATATGATACGAACGTTTGAATTTCCATCATTTTTTAGCC
TGTGGGGCGCATTACGACACAATCGACCACTAGCCTGGGACAACGATTTC
GATATCGGTTTAGTTTACGAAGAACTAAAAGATAATGGATTAGAACAAAA
ACTTTATAAAGAACTTCAAAAGAAAAATATCAAAATTTATTATCGGTTAT
GGTTCGGTACCTATCGGGTTACTCGGGATACCGCACGTGGTGATTTGATG
ATATACCGACGAAACTATTTTGATACTTGTGTACGGTTAGGTATGGAGTC
GTGGGTTTTCTTTGTGAATTATCGTAAGTATCATCAATTCCCATGTCGAT
TGATTAAGAAACCATTACCTAGTATGAAATTTTCAAAAGTGAACTTCACG
GTACCGAGAGAAGGAAATGAAATTCAAAAACATTTTTATCCAGAAGACTG
GTGGGTTGAAAGTAAACCATCTGGTTGTTGATGATGTTGATGAAACATTC
AGAAACATTCTACGATTTTAGCTTCTTGATTTTTCAATGAATTTAAGACT
TGAAAATGTTCAAGTATCATATGCCGGAGCAACACTGTTGTTATTCCGTT
GTTGCTAGATTTAGTTAGTTTATATTAAGTNCGGAGTAACACTGTTGTTA
TTCCGTTGTTGCTAGATTTAGTTAGTTTATATTAAGTCCGAACTTGATTT
TTCAAAATGTGAAATGAATGATTCTCTGATATAATATTTGGGCGAATATT
AAACGTCGTCGAGTCAAAGCACATTTAAGGGCTCTGACCATAGTCGAAAA
ATTGATTTTAGTATTTGAACATAAAAGTTATGTTTAACACTTTTAACAAA
GAATTGCCTTTACAAATTGCTTAAGAGTAATTAAAAATTTAATTACAAAA
ATGACGCTATGAACTTTAAAAAGACGTTAATAATATGTTGTATTACCTTC
TTTTATAAAAAGTGCTAACTTTTGATAGTTTTTTTCAAACTGTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041631XLOC_041631Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066552-exon-scaffold_456-1575043694:455824..455929TCONS_00066552-exon-scaffold_456-1575043694:455824..455929Clytia hemisphaericaexon
TCONS_00066552-exon-scaffold_456-1575043694:444427..444670TCONS_00066552-exon-scaffold_456-1575043694:444427..444670Clytia hemisphaericaexon
TCONS_00066552-exon-scaffold_456-1575043694:442634..443581TCONS_00066552-exon-scaffold_456-1575043694:442634..443581Clytia hemisphaericaexon
TCONS_00066552-exon-scaffold_456-1510915933:455824..455929TCONS_00066552-exon-scaffold_456-1510915933:455824..455929Clytia hemisphaericaexon
TCONS_00066552-exon-scaffold_456-1510915933:444427..444670TCONS_00066552-exon-scaffold_456-1510915933:444427..444670Clytia hemisphaericaexon
TCONS_00066552-exon-scaffold_456-1510915933:442634..443581TCONS_00066552-exon-scaffold_456-1510915933:442634..443581Clytia hemisphaericaexon
TCONS_00066552-exon-scaffold_456-1491911889:455824..455929TCONS_00066552-exon-scaffold_456-1491911889:455824..455929Clytia hemisphaericaexon
TCONS_00066552-exon-scaffold_456-1491911889:444427..444670TCONS_00066552-exon-scaffold_456-1491911889:444427..444670Clytia hemisphaericaexon
TCONS_00066552-exon-scaffold_456-1491911889:442634..443581TCONS_00066552-exon-scaffold_456-1491911889:442634..443581Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:442634..455929 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.225718	35.1929	16.5616	23.3317	21.2205	3.11694	0.662575	5.41508	1.05781	0.374772	0	1.0806	1.49853	1.89923	1.36873	0.895336	0.465341	3.23926	0	2.88434	1.75949	27.2301	16.8178	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066552 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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