TCONS_00066553 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066553
Unique NameTCONS_00066553
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1405

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066553 ID=TCONS_00066553|Name=TCONS_00066553|organism=Clytia hemisphaerica|type=transcript|length=1405bp
CGGATTTATTAGTTATTTCAACTTTTACTATGTGTGTGTGTGGTGACATG
AAGGTGCCAAGCCTGTTGAAAGATGTCAACAAAATCACTTGGATATCTCG
ACTTATAGAAAATTATTCTTTGCTTATTAAAACAACGGTTTCTTAGAAGA
CTTAGaaagatataattttttttgtttttgccttCTTTGAAAAAAACAGC
AGACGAAAAGAATaaatgttCGATATGTTAACACGACATAGCCGTAATCG
ATATCGGATCATTGTTCTATCCTTAATCTTCGTCACATCAATATACGTTT
TTCTTAATAAACGTAATTGGGCATGGTACAATCGGTCTAGTGGGGAGAGT
ATTTGTGAAACACCAGAGCCTGAAATGAAGGACTTGATTGCACTAGCGAC
TGATACCCGTGACGTCTTACACGGACTGAAAATGACGTATTTCTTGATAT
ATGGCAGCCTGTGGGGCGCATTACGACACAATCGACCACTAGCCTGGGAC
AACGATTTCGATATCGGTTTAGTTTACGAAGAACTAAAAGATAATGGATT
AGaacaaaaactttataaagaacttcaaaagaaaaatatcaaaatttatt
atcGGTTATGGTTCGGTACCTATCGGGTTACTCGGGATACCGCACGTGGT
GATTTGATGATATACCGACGAAACTATTTTGATACTTGTGTACGGTTAGG
TATGGAGTCGTGGGTTTTCTTTGTGAATTATCGTAAGTATCATCAATTCC
CATGTCGATTGATTAAGAAACCATTACCTagtatgaaattttcaaaagtg
aaCTTCACGGTACCGAGAGAAggaaatgaaattcaaaaacatttttatcc
aGAAGACTGGTGGGTTGAAAGTAAACCATCTGGTTGTTGATGATGTTGAT
GAAACATTCAGAAACATTCTACGATTTTAGCTTCTTGatttttcaatgaa
tttaaGACTTGAAAATGTTCAAGTATCATATGCCGGAGCAACACTGTTGT
TATTCCGTTGTTGCTAGATTTAGTTAGTTTATATTAAGTNCGGAGTAACA
CTGTTGTTATTCCGTTGTTGCTAGATTTAGTTAGTTTATATTAAGTCcga
acttgatttttcaaaatgtgaaatGAATGATTCTCTGATATAATATTTGG
GCGAATATTAAACGTCGTCGAGTCAAAGcacatttaagggctctgaccat
agtcgaaaaattgattttagtatttgaacataaaagttatgtttaacact
tttaacaaagaattgcctttacaaattgcttaagagtaattaaaaattta
attacaaaaatgacgctatgaactttaaaaagacgttaataatatgttgt
attaccttcttttataaaaagtgctaacttttgatagtttttttcaaact
gttcg
Run BLAST on NCBI

transcript from alignment at scaffold_456:442634..456174-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066553 ID=TCONS_00066553|Name=TCONS_00066553|organism=Clytia hemisphaerica|type=transcript|length=13541bp|location=Sequence derived from alignment at scaffold_456:442634..456174- (Clytia hemisphaerica)
CGGATTTATTAGTTATTTCAACTTTTACTATGTGTGTGTGTGGTGACATG
AAGGTGCCAAGCCTGTTGAAAGATGTCAACAAAATCACTTGGATATCTCG
ACTTATAGAAAATTATTCTTTGCTTATTAAAACAACGGTTTCTTAGAAGA
CTTAGAAAGATATAATTTTTTTTGTTTTTGCCTTCTTTGAAAAAAACAGC
AGACGAAAAGAATGTGAGTAACTTTGTGAGTAATTTTTTTTATCTGAAAA
GTTTATGATTTTCTACAATTTTGTTTTGTCTAATAATACTGAGTACTGTA
TAATCGTATAGGTATCAAATGGAAGAAAATGAAGTGTTTTGAAGTAGTTT
CGTAAGTTATTTAACTATGTTTTTACATGACCAGATTTACCAAAATCGTC
GTATTCACTTTCGACAGATTCGACAGATTCAAATCGAAAGTAGTACCAGA
GCCAACCTGAATCGAACGGCGCGTGACCCAAACATAGTGTGGACAATAGC
TATTATTGAAAAATATAATAATGGGCTCTTCCAGGAAAAACTGTGTCGAG
GGTGTATATAACATTTTAGTTGTTTTATATGTAGATTTAAACGTGTAATG
TTAATTTGCATAAACGACTGGTAACAGCGAGTGTTGCGACCTTGTGAGAC
CTCTAACCGGACACGCAGAAGTCTGTGTGTTGACTTTTCAGCCGAAAATC
TGTAACTATGGTGTTGAAAAAGTTAAAACTTTCTATTTTATTGTACTTTG
AAAAAATAAAAATATTTTCTATTTATTTTGTTGATAATTTTTTCCCGCGC
TTTTTCTAATTTTTTTTCTAAAGTTTACAGACTACATCTTTCTCTTGCAC
AAAACATAAACACTCGACATTCACGGTTTGTGTAAACCGCAGGTTACAGG
TCGCAGGTTACAGGTCACAGGTTACAGGTCACAGGTTACAGGTCAGAGGT
TACAGGTCAACAAAGTGCAGACCGGAAAAAAGATAATAAGATCATAACAT
ATACATAACATAACATCAATACATAACGCATTAAATTACAAAAAAGTAAT
ATAATATACATGTTATTTAGATATTATAAAATGACAATTGAAAAGAATAA
CAACCTAGTGACACTTACTTACAAAAATAATGACAAAATCATAAAAAAAT
AAACAAAATCGAAAAATATTTATTAAACAAAATGTGATGTGGATGGTGTG
AATGGATAAAAAATGGCACCAAACAGAAGCTTGCAAGGTCCCTAAGAGAG
TGGTTTTAGAAGGATGGAACTAATTAATTACAGTATTCAGTTATTATTTT
AATGTCTTAATGACAATTTTTGACAAAAATATTAACAGAATCATAAAATC
TGATGCAAGAAAAGACAAAAACACGAAAGATATTTATAATACAGAATGTG
ATGTTGATAGTGTGAATGGATATAAAACCAGTGGCGGCCTGGCAGGGGGT
GCAGGGTGTGCAGTGCACCACCCAGAAAGACCTGAGAGGGGCGCCAAAAA
AGTTTTTCAAGGGGGCGCCAAAATTTTTTTTGATGTTTGGTTGGGCGATT
TGACGCCCTTTGACACGTTTTTAGCGCCTTCTATAAGTGCAATGTAAATT
TTTTTTCGCCTGCGGCGCTTCGTTTTATTTTACGAATTTTTTCAAAACTA
CTATCAACATTGAATTGCGAAAATTCAAAGCAAGAGAAGTGTTGTGTATC
CACCAAGGGTTAAAGAGGATGCTCACCCCCAAAATGAGAGATTGATCGAA
ACTGCTCGCTGTGGTTTGTGTGGTCTTATGCGGACTAACTTTCTCCTTTT
TTGAATATCTTTTAAGCTGTTTGACCTTTCTTACACCAAATTTTTTTCCC
TGAGGCCAGAGTTACTAAGAACCCTTATTCCTGCCAACTTTCGGAATTTT
ACGGCCTAATTCAGCCATTGATCTTTAATGGAAAGTAAAGTAACACCAGG
AAATAACAAGGAAATAGATATCAAGTTATCATTACCACCACCTTCGTATA
AATAAAAGTTGGTTAACTCAGAGATTCCGGGCGTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACG
ATAACAATATGGCTGGATATAAAATTACACCAATCAGAAGCTCGTGAGTT
CTCTGAGAAGGTAGTTTTAGAGCGATGTGTTTTATTATATGTACAGAATG
TGGCCCCCAAAACGGCGAACAAATTTGAAATTTCTCTCAAATCTAGAGGA
AAAGAGATTTTACAAAAATTTTTACTGCATTAAAACCTTTAACATCTCTT
CTTTATTTCCTGGAAGTTCTTTTTCAAAATTTTCAATTTCAACAATATTT
TTCAATCGCTTAAAGATAGGTAGCTTTTTTTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTGAATCTGTCTCAAACCAGCAAAAAC
ATGCTCATTTTTAAGTATAACCATCATTCTTTCAAAATAAACAAAAATCG
TTTAATTCTGATAAATCTACAACCTCCGTTTTGGGGGCCGTCTCTGTTTC
GGGGGCCATATACTGTAACCATCATATAACATTACAAACATTACAATATG
TAATATACCTGTTATACGTATAATATGGTTTCAAATATTTTCANAAGCAA
AAATTTAATTCGAAACCCGTGTATTAAAGGTTTTCTTTTTACATAAGTGT
TTCCGTTTCATATCAGACACATATTTCATATCAGGACAGTGTCTTGCTAT
TGTTATTGGTCCAGCGCGCAGCAGAATGGACCTTTAAAAAGCAACTGATC
GAAAAGATTTTGTCTTTGTCGGAGCCTGCGCGCGCAATGAATTAATTAAG
TCCAGGCTAAACCAACCGCCGATCTAGAATTTTTGCCCTGCCTAANGCGA
AAGATCGATAAAAGCACATGGTTAAATTTTGATGTTTGAAATGGTTTTAT
ATGGATGAAATTGCTTGAGAATTATGTTTTTGATAATAGACCTTTTCATA
AATTACGTCACGAACATCACTTGCCTCGTTTTGAAATCATTGCCATGGTG
GTTAACTCCCAGTGGATTGTATTAAAACTACTTTCTATTTATATAAAAAT
TATTTAATGTCTCCAGGGACATAATCACCATGGTAATTGATTGAATATGA
GGCAAGTGATGTTCATGACGTAATTTATGAAAAGGTCTNGGTAGTAGAGT
CAAATTTCCCGGTTAGATTAAAGGGTTGTTTCAGGTAGGGTCAGGTAGGG
TTAGGGCTAGGGTTGGGGATGGGAGTTAACCACTGGTTAGGGTTTGGAGT
AAATACCATGTTTATAAGGAACTTTGAACTCCTCAATGCAGTTGTGACTC
GATGGCCGAGTGGTTAAGGCGCTGGCGTTCTTATCATAAGTGCTTTGTAT
ATAGTGGGTTCGAATCCCATCAACTGCAAAAGTTTCAAAATTTCGGGAAA
TGCATCAAAAACTCTCTCATCTTAGCTATACAAGTGTCAAAGAATAGAAG
CTCAGAGTGGAGGATGGGAAGAAAATTTTTTTGCGTCACTTAAGAAGGAA
CCCGGTACGAACAACATTCGGTTATTGCCACGTCAGCTGGACCTTCACGC
CGCTCTGGCTTCTTGTATTATACTGATATAAGCAAAAAAATGTTTTTCTT
TTCCTCTTTCTGTCCAATCTTGCTCCACATCCGTGTCAAACCAATGTTAA
AAAGCTTGTAAATTAAAATTGATGAGTAAGCAAACGATATCACTCTTATT
TAAAAACAAAACCTTTAAGATAACAAATGATTCTTTGACATTACTTGAAA
TCCAGTTTGCAGAGTGTGGCACGTTTACACTTGCTTTTTCTCGAGTGCAC
AACTCGGAAGAAGTCGAGTGCAGGTGCAAAATTTGAGGTTTTCAGGTGCT
AGTGCAGACGGTTTTTAACCCCAAGTGCAGAGTTCCGCAATTTTCTCCTC
AGATGTAGCTAATTTTTGCAATTTTTGCCTTTTTGGGCCAATTTCCGAGG
TATAGGTGCACCTTGTCTGGACCAAAATTTATCAAGGGCGCTCTTCCAGA
GCGGAACTTGGTATTTCCGAATTTTTCCTCGAGTGCAGCCTTGCCATACT
CTGCAAACTGGCTTAAAATTATCAGGGGCATAGAGATATTCTGAAGTTTC
TAAAGGGATTAAATTTTAATTTTATTTCGCCAACATTCACTTTACGGTAT
ATAGATTAATTTTCCTAAGTGCAACTCCATTCTTTTTTCGTAGAGTTTTC
ATTACAAATGTTGCCATTCTTCCAGAGGATTTGCACAATTTTAACTATCC
CTTTGGCTTGAAAAGTTTCGTCCACCTCTGAATCCAGGAGAACAATAGTC
CGGGGAAACAAAGACACCTCAGGCTAAGGCGAGTTGCCAGTCCGAGGTTG
TGTCACAAAAACAAAAGCAAAAGTCGAAAAGTACTCTCGGGTACCTAATA
GCCGCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCC
CCCCCCGCTTATTCCAATCCCCCGTCTATTAGGTACCCGAGAGTAGTCCC
TCGTAGGGTACTTTTCTTGCTATATTTTGGGAGAAATTAGAACCAGGCCA
ATCGGCTACTGTAAGTCCCCTTTAAATCACGGGGGTTTTTGGAATGAAAA
AAATGCGGATTGGTTTACACATTTTTTATAAGAGATATTCTACACTGGTT
TAAGATAAATGGGTTTGTTGCTAATCCGGGCAAGATTCAAGTTATGTTTC
TCGGTAGATTTGAACCTATACAGAGTGTTACTATAGGTAATATCAAAGTC
AAAGTTAAAAATCAGGTTAACTATTAGGTATCTATATTGATGAAAAACTA
CACTTTAACTCTCATGCTGAATTATACCAAATACCAAAAGGCGGGAAATA
AAATCAGCACACTTAGACGCATCCGCCCCTTTCTTTTTCTGAGAACGGCA
AAGGCTTTAGGTCACGCTTATATATTCTCAAACTTTAACTAGTATCCGCT
AATCTGGATAAATTTTGTAAAACACAACAATAAGCAAATTCAGAAAATTA
ACGTAGAGCTTTGGCTGTAGTTCATCAAGATTATGACTCTAATCTATCTC
AATTATTGACTATATTCTAAAACAGCATCTTTTCACATCAAGTTCATCCT
TGAAGAAATCTATAAAACTTTGAAAAAACAAAATCATTTATTTCCAGCTA
AACTATTTAATATTAAAACTTCTGGCTTCAGTCTAAGACGAGAAAACAGC
ATATGCTACCTACAGCAAACACCGTCAAGTTTGGTTTGCAATCTTTGTGT
TTTGTCGGATCTTTATTAAAAGTGTTACCAGAGAATTTTTGTACTTTGTA
CCCATTATGCAAATTGTAGTAAATAGGTATTTTTATTTTAAATAAGTTGG
ATTTTATTAGTAAACGGGCACGGCTGTAATTATTTAGGACATTGGGTCCT
ATCGTTATTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCTTTGTCC
GTTCGTCTGTTCGTTCGTTCGTTCGTTCGTTTGTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTCATGATTGGCTCGTTAG
TTTTTTCTGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAATGT
GACGGAGCCCGATTTTCAACAAAAAAAATTTTTGGGAAAATTTGGGCCAA
AAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTT
AATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCGTAGGTAAAAG
ATGACTTAAGCGAATTTTTGCAAAAAAATTTTATTGGCTCAAAAAACGCA
TGTTTATCTATAAGAATTACTATTAATAAGCATACATCAATGTTCTTAGT
CAAATTACTCAATTTTTTTATGAGATTTTTGCTCAGGAGGGCTTACTTTT
AAAGAATATGTGTGTTTCGACATGAAATTTTGGTTGCTTGGCGTGTTTTT
ATAAAATAACTGGCCAAATTCGATATTTTTTTATAAGCACATTATCAATT
ACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTTATTCTTTATGATTT
TTTGAACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGAT
TTTCAAAAAAAAAAATTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAAT
GGGTTTTTTGGACTTTGTGAATTATTGGATCATTATTTTTTTCTAATTTT
TTGTATGAAAGTAGGATACCATCATAGGTAAAAGATGGCTCAAGCAGATT
TTTGTAAAAAAATTTTCTTGGCTCAAAAAACGCATGTTTATCTATAAGAA
TCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCCTTTTT
TTATGAGATAGATGTTTTTTTTTGCTCACGAGGGCTTACTTTTAAAGAAT
ATATCTGTTTAGACATGAAATTTTGGTTTCTAAACGTGTTTTTATAAGAA
ACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTG
TTTGATGGTCACGCTTATGTAGATATCAATTATACATGTGTTAAATGCAT
AACCAGGTAGGTCCATAAAAGTATCACTTGTTACCAACTGAAAATAAATT
GATAATAATTGCCCAACAGCGGCTTTTGTTGCTTCACGTAGCGGGCTTGT
TCGCCAGAAAAATATTCATGATGTCGATGTTGTTTCTTCTGATTCTGAGC
GGGCCGCCTCGGTTAAAAAATGCTCGCGCGCACCTATTGTTTTATCTATT
TTGTTATCTGGCACCCAGATGGTGAAATTTTTATCCGACACGCTAAAGCT
CTAAAGGTCGGAAAATATTTTCTACATCTGGAAGGTTATGATTAGTTCCA
TTTATACTGAGACGGAAAAATCGTCTGAAACGAGTAGTTTGTAAAATGTG
ATCTGTGGAGGAGATCCTATTTATTGAAACATGAACGGAAAGTACACTCC
TCCTTAATGTTCGTTTTCTAAATTGTTTGTCTCAGACAAATTAATCGTCT
CAGTATAAACATGGAGGTAATAAAGATATAGATGGAGAGAAAACGTCTCG
GTAATGAACTAAATTGTCGTTGAAATCTTTTATGAATCTATTCAAAGCGG
CTTTTCTTTGATGTACCATCATTTTTGGAAGCAAAAAACATCAATTTATA
ACTTTATAAGAACAGAAGGAGACTGTTTGGTTGATTTTGAAAAACTTAAT
TTTGCCGAAAATCCTTGTTAAAATGCGATTCGAAATAGTTTCAACTGATG
TAAGACTAAAAGAGTATATTAATTTCATAAGGACACATTTTTGGGCTGGC
ATTTTGTTAACATTGAGAGTTGCATCACATTATCATTGAAAGTTTCTTAT
TATAAGATCTTCACGTTTAAGTGGGCAGCGGTTTTCATACTCTGACAAAA
TAATCGATACAAGGTTCCTAATCGTAACACCTAATTCTTTTTTAAATCTA
TCGATGGCTTTAAGGGCAGCTTCCCCTAGAAGTTTGGAGTATTTTGCTTA
TTATGTGAAGTTTTTTTCAATTTTTCATGACAAGGCTATTATATTTCAAT
ATACTTGTTAAAAATGTAATGTCTTTTCATTCATCTTAAATATTCCCACG
AGTATACCCAAAATTAATCATCTTATTCCCAAAGCAACCAAACAGCTGTT
TGCTTCCGATGATAAATCAGAATAGAACAAAAGGCATTGACTCTCCATCT
ATATTTTTATTACCTCCATGGACACAGCTGATTGGCTTAGGTTTCGAAAC
TCTCTATTGTTTCATTAAAACCTCAGTGTCCATGCGATTTATCCGGAGAA
TTTCAATATTCAAACCAAGAGCAGTGCTCATCCCGAAGAGAAGGAGTTTT
AAACGCTCGAACGAAGGAAGATATGACGTAGCCTAAGAAAAATAAAGCTT
TCAGTGTAATTAATTTCATTGTTTTCATGATACTGGAAAAAAAGTGCTGA
AAATCATTACATGTTTTTTTCTTTTTTAAGCATAACGTTTATAAGCATAT
ACAGGCTCAGTTTTTGGTACCTAAACAATGACTCTATTGTTTGAGAACAA
TAGAATACTAAGCATAATGCGAGCCTGACATAGGGACAGACACTTGCTTA
TAAAAAAAACATGTATGAGATAAGCTCGTAATTACATGATAGCTCGTGCA
ATTCAAAAATTTACACACCAATTCTTTCCGGATAATTCTTGTGATTACAT
AGTATAATTGGCTCGTTTAAAAGAGCAGTTTTTCAATATGAATCATGCTG
CTCTATTGTCCTCGGGAACGACAATTTATATGTCAATGTTTTGAATGGTA
CAAATTATCGCAGTCTTATATTGAATGTACTTGTAAGCATTTGCTTATGT
ATATATACGTGTCGTTGGGAAATAAAAAATGAAAGACGAACGTTCGTTGA
CAGTCAAAGATTCAAGTTAGTTTTATTTATTTTTGAGTTTCTCAAAAAGT
CTTTCAATTTCTATTCATTGGGTAGTATATGATGGTCTAGGGCTCACATT
TTTTAATTATATATTTTTCACCGGTTATAAAAATGAATATCCTAAGAATT
TTCTACCAATGTAGTTTAGCCTTAAAAACTATAGCTAGAGTGTAGTGTAA
AACAAAGGCAAAGTTTCTCCACGCTTTCAGGCTTGCACCAACACCTTCGA
GAAAAGTTGTTGTTGTGCCAAAAATGAAAAAACGGTTTTCATAATTGCGT
AACTTTACTAAATACACGCTTTTTTTTATAAGAATGGTGTAAATCCATTT
CATCATGGATATTCTTAACTTTTTTGGGGAAATCATCCTAAAATATTGTT
ACAGCATTCTTAGGTTAGGATCCTAATTCAGACTAGATTTAACATTTAGT
ACATACGTCTCAAGCAGAAAATGGCATTTTTGTGAAAGAAGTGAACCTTA
CTTGAGGGCAATTGACAATTTATAATCGAAAATACTCTCGGGTACCTAAT
AGCCGCCCCCCCTGCTAATTAATTTTTGGGAAAATGTTTTTGAAAGTTCC
CTCTTTTGTCCTAATTCAGCTGTATTAGCCTCCATTTCAAAAATTTTCCA
CCCAGGACATTTTTATTCCAACCCCCCCCCCCCCCCTCTTTCTTTTTTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA
CTTATTAAGTTTTGAGATTTTTTCCAACCCCCCGGCTATTAGGTACCCGA
GAGTAGGTTGTTTTGAGGTTTTGGCCAATTTTCAGTTTCACTCTTAGTTC
TTATAAAAAAAGCGTGTATTTAAAGTATTGCAAAAGCAATCTTTCCTAAC
TCCTAACATTTTATCAACATCACATTTCATAAATTACGTCACGAACATCA
CTTGCCTCGTATTCAAACAATTTCTATGGAGATTATATAGGAAGTAGTTT
TAATAAAATCCGCTGGGAGCTAATCACCAATGCAACAATTTCAAAACGAG
GCACGTGATGTTCGTAACGTAATTTATGAAAAGGTCTATTCTTTTCTTTT
TTAGAAATGTTCGATATGTTAACACGACATAGCCGTAATCGATATCGGAT
CATTGTTCTATCCTTAATCTTCGTCACATCAATATACGTTTTTCTTAATA
AACGTAATTGGGCATGGTACAATCGGTCTAGTGGGGAGAGTATTTGTGAA
ACACCAGAGCCTGAAATGAAGGACTTGATTGCACTAGCGACTGATACCCG
TGACGTCTTACACGGACTGAAAATGACGTATTTCTTGATATATGGCAGGT
ATGTTTATTTGAAGTTTTTCTCTCTGATGGTATTGAAACTTTTTTCGGAT
TGTTATTGTAAGCTTATTTTTTATAAGAAAGAATATTTTTAAAGCCTTTG
GATGTTCTTAACTTTTTGGGTTTTATGCCTTAAATGTGATCATAGTCCGT
ATAAAAAACCCCGGTCTGGAAGCCTTTTGTTTCTTTCTATTGAACTTGAA
CTTGCATTGAGAAATTATTTTATTTTGCTCACTTTTTGATCATGTGATTA
ACTTTTGAACCAATCCCAAGAGGAGTATTGGTAATGTGATCCAAAACTGA
GCAAATCGATTTTTATCTTTTGAAATTATCAACAAATGAAAAAGTTAATA
AATAGTTACACAAAAGGCTTTTAGACCAGGGCTTTTTATACGTTCATAGT
TAGAGGGGGGGGTCTTAGGTTTTGATGAACCAAAAGCAAGGGGGTGCTAA
AAGTATGACTTTCTTAAGGGGGGTTGCCAGTTAAGGGGGGTCTTTTTACC
TAAGGGGGGTCTTCTTACCTAAGGGGGGTCTTCTTACCTAAGGGGGGTCT
TCTTAGATAAGGGGGATCTTCCTTGAATTATGACTCTTGTACAATCGTTT
CATTTATACTGATTTTCTAAGGGGAGGGTGTAAAATTTTAAATGAATTTC
ATAAGGGGGTTAGCACTTAATGGGGGGTCCTCTTACCTAAGGGGGGGGGT
CTTGACCCCTCTAGAAACTATGAATACGGACTATATGACGTGATAAAGTG
ATGTCACTGAATCCTGATGCATGGTTGTGTTCAAAAAGTCAATACTATAG
AGAACAATATGATACGAACGTTTGAATTTCCATCATTTTTTAGCCTGTGG
GGCGCATTACGACACAATCGACCACTAGCCTGGGACAACGATTTCGATAT
CGGTTTAGTTTACGAAGAACTAAAAGATAATGGATTAGAACAAAAACTTT
ATAAAGAACTTCAAAAGAAAAATATCAAAATTTATTATCGGTTATGGTTC
GGTACCTATCGGGTTACTCGGGATACCGCACGTGGTGATTTGATGATATA
CCGACGAAACTATTTTGATACTTGTGTACGGTTAGGTATGGAGTCGTGGG
TTTTCTTTGTGAATTATCGTAAGTATCATCAATTCCCATGTCGATTGATT
AAGAAACCATTACCTAGTATGAAATTTTCAAAAGTGAACTTCACGGTACC
GAGAGAAGGAAATGAAATTCAAAAACATTTTTATCCAGAAGACTGGTGGG
TTGAAAGTAAACCATCTGGTTGTTGATGATGTTGATGAAACATTCAGAAA
CATTCTACGATTTTAGCTTCTTGATTTTTCAATGAATTTAAGACTTGAAA
ATGTTCAAGTATCATATGCCGGAGCAACACTGTTGTTATTCCGTTGTTGC
TAGATTTAGTTAGTTTATATTAAGTNCGGAGTAACACTGTTGTTATTCCG
TTGTTGCTAGATTTAGTTAGTTTATATTAAGTCCGAACTTGATTTTTCAA
AATGTGAAATGAATGATTCTCTGATATAATATTTGGGCGAATATTAAACG
TCGTCGAGTCAAAGCACATTTAAGGGCTCTGACCATAGTCGAAAAATTGA
TTTTAGTATTTGAACATAAAAGTTATGTTTAACACTTTTAACAAAGAATT
GCCTTTACAAATTGCTTAAGAGTAATTAAAAATTTAATTACAAAAATGAC
GCTATGAACTTTAAAAAGACGTTAATAATATGTTGTATTACCTTCTTTTA
TAAAAAGTGCTAACTTTTGATAGTTTTTTTCAAACTGTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041631XLOC_041631Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066553-exon-scaffold_456-1575043694:455962..456174TCONS_00066553-exon-scaffold_456-1575043694:455962..456174Clytia hemisphaericaexon
TCONS_00066553-exon-scaffold_456-1575043694:444427..444670TCONS_00066553-exon-scaffold_456-1575043694:444427..444670Clytia hemisphaericaexon
TCONS_00066553-exon-scaffold_456-1575043694:442634..443581TCONS_00066553-exon-scaffold_456-1575043694:442634..443581Clytia hemisphaericaexon
TCONS_00066553-exon-scaffold_456-1510915933:455962..456174TCONS_00066553-exon-scaffold_456-1510915933:455962..456174Clytia hemisphaericaexon
TCONS_00066553-exon-scaffold_456-1510915933:444427..444670TCONS_00066553-exon-scaffold_456-1510915933:444427..444670Clytia hemisphaericaexon
TCONS_00066553-exon-scaffold_456-1510915933:442634..443581TCONS_00066553-exon-scaffold_456-1510915933:442634..443581Clytia hemisphaericaexon
TCONS_00066553-exon-scaffold_456-1491911889:455962..456174TCONS_00066553-exon-scaffold_456-1491911889:455962..456174Clytia hemisphaericaexon
TCONS_00066553-exon-scaffold_456-1491911889:444427..444670TCONS_00066553-exon-scaffold_456-1491911889:444427..444670Clytia hemisphaericaexon
TCONS_00066553-exon-scaffold_456-1491911889:442634..443581TCONS_00066553-exon-scaffold_456-1491911889:442634..443581Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:442634..456174 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.852565	0.85415	1.10849	0	0	1.25346	1.13591	3.92036	1.88226	4.86774	1.83249	1.32053	0	0	2.49868	3.31771	0.691536	0.794826	0.475407	2.63114	0.166823	0.162788	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066553 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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