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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066651 ID=TCONS_00066651|Name=TCONS_00066651|organism=Clytia hemisphaerica|type=transcript|length=541bp
CAGTTATCTGTCATCTGTATGTAACAATAAATACTGTCAACTGTACAACA
CCCACCACCACCAGTTAAAACAAAGATAATATAAAATGTAATGCTTGGAA
GCTTTCGATTGACTTTGAGTAATGCTCTCCTTCGcttcgaacaaaaatca
caTCGAGTTGGTCCATGGCTTTTGGAAAGAAGAACCTCACAACTTGAAGC
TCGAATGATAATCGGTGCAATCTACATAACGTACAACTATCATCATGCTT
AAACTCTGCAATATCGTAGAACTCAAATACTGGCCATCATATTCAACTTT
ATTCAGTTTGACGGAGCAATTGTGACACAATTTTGTTGGGTGTTGAAGGG
GATCATCATCTGAAACATCATGGGAAAACAGCATCAAAATCTTGTCTTTT
CTTTCAATTGAACACATACATGTCTTGACGTTGGACTCGTTtgtgttgat
tttctttctacAAAGTCTGCATaccttggaaatttttctcgaatGTTCTT
ACATTCCATCTGTACAAATAGTATTCTCCATTACAATTCAA Run BLAST on NCBI transcript from alignment at scaffold_457:254289..255256- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066651 ID=TCONS_00066651|Name=TCONS_00066651|organism=Clytia hemisphaerica|type=transcript|length=968bp|location=Sequence derived from alignment at scaffold_457:254289..255256- (Clytia hemisphaerica)
CAGTTATCTGTCATCTGTATGTAACAATAAATACTGTCAACTGTACAACA
CCCACCACCACCAGTTAAAACAAAGATAATATAAAATGTAATGCTTGGAA
GCTTTCGATTGACTTTGAGTAATGCTCTCCTTCGCTTCGAACAAAAATCA
CATCGAGTTGGTCCATGGCTTTTGGAAAGAAGAACCTCACAACTTGAAGC
TCGAATGATAAGTGAGTTAGTGGTCATAACATATAGTTCCTGGTCCTCTA
AATATCCATTCGGTAAAAAAAACTCGAACCCTTCAACCTTGTATTCAATT
AGTTCACGGAAATCATCATTTCCTATGCAAATTTTAGCTTCTTTCAGATC
TTGAAGTACACTTTCAATGTTATTAGCTGTTAAAATGACTGGAAGACTTT
GAAAGAACGATCCCTGCGTTATGTCTCTTTGATAAACCTTTAACATCCAA
GAGAGATCATATTTTACAGTTAAACAAAAGTGTTATAACAATGTCCTTGT
CCAACAAAGCAATTTTTACTAATTTCTTTGATAATAATTCCAGCAGTATG
AAACCATTCTCTTTAGTAATTGCAACTAAAGTATCAAGGTCAAAAATCTT
GGATTGTTTCATTGTGGTGGAAACTTGTTTTCTTTTAGTCGGTGCAATCT
ACATAACGTACAACTATCATCATGCTTAAACTCTGCAATATCGTAGAACT
CAAATACTGGCCATCATATTCAACTTTATTCAGTTTGACGGAGCAATTGT
GACACAATTTTGTTGGGTGTTGAAGGGGATCATCATCTGAAACATCATGG
GAAAACAGCATCAAAATCTTGTCTTTTCTTTCAATTGAACACATACATGT
CTTGACGTTGGACTCGTTTGTGTTGATTTTCTTTCTACAAAGTCTGCATA
CCTTGGAAATTTTTCTCGAATGTTCTTACATTCCATCTGTACAAATAGTA
TTCTCCATTACAATTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066651-exon-scaffold_457-1575043694:255046..255256 | TCONS_00066651-exon-scaffold_457-1575043694:255046..255256 | Clytia hemisphaerica | exon |
| TCONS_00066651-exon-scaffold_457-1575043694:254289..254618 | TCONS_00066651-exon-scaffold_457-1575043694:254289..254618 | Clytia hemisphaerica | exon |
| TCONS_00066651-exon-scaffold_457-1510915933:255046..255256 | TCONS_00066651-exon-scaffold_457-1510915933:255046..255256 | Clytia hemisphaerica | exon |
| TCONS_00066651-exon-scaffold_457-1510915933:254289..254618 | TCONS_00066651-exon-scaffold_457-1510915933:254289..254618 | Clytia hemisphaerica | exon |
| TCONS_00066651-exon-scaffold_457-1491911889:255046..255256 | TCONS_00066651-exon-scaffold_457-1491911889:255046..255256 | Clytia hemisphaerica | exon |
| TCONS_00066651-exon-scaffold_457-1491911889:254289..254618 | TCONS_00066651-exon-scaffold_457-1491911889:254289..254618 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_457 | supercontig | scaffold_457:254289..255256 - |
Blast
The following BLAST results are available for this feature:
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