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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066665 ID=TCONS_00066665|Name=TCONS_00066665|organism=Clytia hemisphaerica|type=transcript|length=1046bp
AGGGATTGGGAATACCTTCGAATAACAGAAAGATtgaaataatagaagtt
cgaataagcgagagtctactgtaaCAAATTAAGGctaatttaatgaaatt
tcgcCAAGCATAATGAGTCTCCGCCCGAAtttcccgtatgcttataaagc
AAAAATAATGTATATTTGTGAAATGGGtttcattcaaaagaaatcCTTTG
CCTGTGGTGACTTGTTTTCGCGGTGACACTTTCCAAATATTTCGCAGAGA
CTTATTTTCACGGATATGGACTTTTTAAAATTCTCTTTGGACTTATTTTA
GCGGTGACACGGTCAATAAAAAAAGCAATATGTAATCTTATGGTTTAGCG
TTAAAATGTATAAAGTTGTAGCCCCTAAAGTATAGGTATCGCTTATTCCA
GAGTATTAGCCATAGCgaattgaaacatttataaatgAGAGCTTTATTTA
AAACAGTTATACGACTTGCGGACTGCTTtttaaacagaaaaacaaaatat
tgcCCAAAAATAATTAAACTTTTCATGGagacatattttttcatttcagc
gtTCAAACCAGATCCAAGGGCCCTTACAATATTGGCCAGCTTCTTGAGGC
TCCTTTNAAACCAGATTCAAGGGCCCTTACAATATTGGCTAGCTTCTTGA
GGCTCCTTTTTCATCGGCAGGATTATAAAAACTTTACTTGGATTTTCAAA
CAGCTTATTGGATATAGGAACTTTCACGTAcccaatttcaaaatgaaaga
acCATATAATTTTACCCAAATATGCTTTTTAGAATTAAGAGCCTCTATAG
ACCGattttttgtgacgtcattttcacccacgatAAGCCTTTCACATTTA
attattgactgaattattTCTGAAATCATTAACATTCAAATTTCTCATTT
GGCTCTTTTCAGTTTTAATCTCAAAACTAAATGGAAAACTGAATCCGAAT
TTCGCTAAATCATCTAGCTCATCAGTGTTTAAATTGCTTTGAAAACACCA
GGTACCCTTacgaaaaaaggaataaaatgcTTGTACTTTTTCAAAG Run BLAST on NCBI transcript from alignment at scaffold_457:131066..132111 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066665 ID=TCONS_00066665|Name=TCONS_00066665|organism=Clytia hemisphaerica|type=transcript|length=1046bp|location=Sequence derived from alignment at scaffold_457:131066..132111 (Clytia hemisphaerica)
CTTTGAAAAAGTACAAgcattttattccttttttcgtAAGGGTACCTGGT
GTTTTCAAAGCAATTTAAACACTGATGAGCTAGATGATTTAGCGAAATTC
GGATTCAGTTTTCCATTTAGTTTTGAGATTAAAACTGAAAAGAGCCAAAT
GAGAAATTTGAATGTTAATGATTTCAGAaataattcagtcaataatTAAA
TGTGAAAGGCTTatcgtgggtgaaaatgacgtcacaaaaaatCGGTCTAT
AGAGGCTCTTAATTCTAAAAAGCATATTTGGGTAAAATTATATGgttctt
tcattttgaaattgggTACGTGAAAGTTCCTATATCCAATAAGCTGTTTG
AAAATCCAAGTAAAGTTTTTATAATCCTGCCGATGAAAAAGGAGCCTCAA
GAAGCTAGCCAATATTGTAAGGGCCCTTGAATCTGGTTTNAAAGGAGCCT
CAAGAAGCTGGCCAATATTGTAAGGGCCCTTGGATCTGGTTTGAacgctg
aaatgaaaaaatatgtctCCATGAAAAGTTTAATTATTTTTGGgcaatat
tttgtttttctgtttaaaAAGCAGTCCGCAAGTCGTATAACTGTTTTAAA
TAAAGCTCTcatttataaatgtttcaattcGCTATGGCTAATACTCTGGA
ATAAGCGATACCTATACTTTAGGGGCTACAACTTTATACATTTTAACGCT
AAACCATAAGATTACATATTGCTTTTTTTATTGACCGTGTCACCGCTAAA
ATAAGTCCAAAGAGAATTTTAAAAAGTCCATATCCGTGAAAATAAGTCTC
TGCGAAATATTTGGAAAGTGTCACCGCGAAAACAAGTCACCACAGGCAAA
GgatttcttttgaatgaaaCCCATTTCACAAATATACATTATTTTTgctt
tataagcatacgggaaaTTCGGGCGGAGACTCATTATGCTTGgcgaaatt
tcattaaattagCCTTAATTTGttacagtagactctcgcttattcgaact
tctattatttcaATCTTTCTGTTATTCGAAGGTATTCCCAATCCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066665-exon-scaffold_457-1491911889:131066..132111 | TCONS_00066665-exon-scaffold_457-1491911889:131066..132111 | Clytia hemisphaerica | exon |
| TCONS_00066665-exon-scaffold_457-1510915933:131066..132111 | TCONS_00066665-exon-scaffold_457-1510915933:131066..132111 | Clytia hemisphaerica | exon |
| TCONS_00066665-exon-scaffold_457-1575043694:131066..132111 | TCONS_00066665-exon-scaffold_457-1575043694:131066..132111 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_457 | supercontig | scaffold_457:131066..132111 . |
Blast
The following BLAST results are available for this feature:
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