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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066724 ID=TCONS_00066724|Name=TCONS_00066724|organism=Clytia hemisphaerica|type=transcript|length=724bp
ATATTGGAATAAAGACGGATTTTAGTTCCCATTCTTCTGGAAACGCGGTT
CATTCATTGAATATTGTTTGGCGCCAGAGTTCATTCAGAGTGGTGTTTTC
AAGAGGGGAAGTTGCAAAAAGTCTACGAAACCAACAACCAGCTCGCAGAT
TGTTTCTTTGGACTTTCCTCGCCACTGAGAACGTATCAACTTCCAAAGCA
TACATCAACAACCAAATGGACAATAAATATAAATTGATGACATCACTTTA
CATCAAAGCACGTAATTGACATATTTGTTGAcaaatcaaaaacaattcaT
CACATTTCACGCCTTCATGTCCCAAAGGTAAAcaatataaaattaaatat
aaaaacCAAGTAATTGTTTTAATTGAATCAAGTAATTgcgaaaaaaagaa
ttatttaatatcatatttttttaaagtttaattttcaCGTCTAAGTGAGA
GTCGATCATCTACGCATAAATCTGTTTGCTTAAAACAATACACAAATCCC
TTAAAAATACAGGCGATTCATTTCAATTCTTTATCAACATTTTGCCACGC
AAACTTTCGGGTTGTTAAAATCTAATTTATAAAAGAAACTAAACAATCAA
GTGACGTAACGcgggttcttttgttttgatgattggtcTGAATAACTGCA
ATGTTTTTGCAAGCTCTAGCATTTTTGaagcagcgattcagacctcAATA
ACAATGAAataatgtcaatctggc Run BLAST on NCBI transcript from alignment at scaffold_459:194852..196152+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066724 ID=TCONS_00066724|Name=TCONS_00066724|organism=Clytia hemisphaerica|type=transcript|length=1301bp|location=Sequence derived from alignment at scaffold_459:194852..196152+ (Clytia hemisphaerica)
ATATTGGAATAAAGACGGATTTTAGTTCCCATTCTTCTGGAAACGCGGTT
CATTCATTGAATATTGTTTGGCGCCAGAGTTCATTCAGAGTGGTGTTTTC
AAGAGGGGAAGTTGCAAAAAGTCTACGAAACCAACAACCAGGTAAATTTT
CTTGTTAATTTCTAATTGTGAAATAAAGGAAATTTTCTATTCTTTGAATT
GACCAATTTGCTTTTTCAATTGAAAAGTCTTTTAAGTTATAATTTTAACT
AGGAAATGTTCAAGACTGACAAAGTTTTCTCTATCTTAGCTCGCAGATTG
TTTCTTTGGACTTTCCTCGCCACTGAGAACGTATCAACTTCCAAAGCATA
CATCAACAACCAAATGGACAATAAATATAAGTATTTTCGCTAGCATATTT
ATTTTGATCGATAATTTCACTTTGAGTTAGTGTAATaaccagaaaaaagt
tttttattagtACGTTTTAATCCAGTCATACATATTTAgcatcaacaaat
ttatacaaGCACACTTGTTTGATTTGACGTTTTAAGACGGGCGAAATCTT
CTAAAGAACTACCCTTTTGGAGGGTCGGTTCGGTGCTAGTATTTTTCTGT
CCTTTTGAAAATGAGAGTTTTTTATTGGCAAGTTTTAATTCAGTCATACa
tattttgtattaaaaatttATGTAAGCACATTTGTTTGATTTGACGTTGT
AAGACGGGCGAAATCTTAAGTACTATACTACTCTTTAGGATATGAGACTT
CTTCTATATATTTGAAAGTTCCGTTGCGTAGACTGAATTTATATCTGATT
TTCTTTCAGATTGATGACATCACTTTACATCAAAGCACGTAATTGACATA
TTTGTTGAcaaatcaaaaacaattcaTCACATTTCACGCCTTCATGTCCC
AAAGGTAAAcaatataaaattaaatataaaaacCAAGTAATTGTTTTAAT
TGAATCAAGTAATTgcgaaaaaaagaattatttaatatcatattttttta
aagtttaattttcaCGTCTAAGTGAGAGTCGATCATCTACGCATAAATCT
GTTTGCTTAAAACAATACACAAATCCCTTAAAAATACAGGCGATTCATTT
CAATTCTTTATCAACATTTTGCCACGCAAACTTTCGGGTTGTTAAAATCT
AATTTATAAAAGAAACTAAACAATCAAGTGACGTAACGcgggttcttttg
ttttgatgattggtcTGAATAACTGCAATGTTTTTGCAAGCTCTAGCATT
TTTGaagcagcgattcagacctcAATAACAATGAAataatgtcaatctgg
c
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066724-exon-scaffold_459-1491911889:194852..194992 | TCONS_00066724-exon-scaffold_459-1491911889:194852..194992 | Clytia hemisphaerica | exon |
| TCONS_00066724-exon-scaffold_459-1510915933:194852..194992 | TCONS_00066724-exon-scaffold_459-1510915933:194852..194992 | Clytia hemisphaerica | exon |
| TCONS_00066724-exon-scaffold_459-1575043694:194852..194992 | TCONS_00066724-exon-scaffold_459-1575043694:194852..194992 | Clytia hemisphaerica | exon |
| TCONS_00066724-exon-scaffold_459-1491911889:195141..195231 | TCONS_00066724-exon-scaffold_459-1491911889:195141..195231 | Clytia hemisphaerica | exon |
| TCONS_00066724-exon-scaffold_459-1510915933:195141..195231 | TCONS_00066724-exon-scaffold_459-1510915933:195141..195231 | Clytia hemisphaerica | exon |
| TCONS_00066724-exon-scaffold_459-1575043694:195141..195231 | TCONS_00066724-exon-scaffold_459-1575043694:195141..195231 | Clytia hemisphaerica | exon |
| TCONS_00066724-exon-scaffold_459-1491911889:195661..196152 | TCONS_00066724-exon-scaffold_459-1491911889:195661..196152 | Clytia hemisphaerica | exon |
| TCONS_00066724-exon-scaffold_459-1510915933:195661..196152 | TCONS_00066724-exon-scaffold_459-1510915933:195661..196152 | Clytia hemisphaerica | exon |
| TCONS_00066724-exon-scaffold_459-1575043694:195661..196152 | TCONS_00066724-exon-scaffold_459-1575043694:195661..196152 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_459 | supercontig | scaffold_459:194852..196152 + |
Blast
The following BLAST results are available for this feature:
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