TCONS_00066735 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066735
Unique NameTCONS_00066735
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1309

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066735 ID=TCONS_00066735|Name=TCONS_00066735|organism=Clytia hemisphaerica|type=transcript|length=1309bp
ggTGCTAATTAattaattcaaatcaaaatggcATCTGTCAAGGTTGCAGT
CAGAGTACGTCCTTTAAATAAAAGAGAAATCAACATGAACTCAAAATGCA
TCATTCAAATGGAAGGGAAAAGGACAAGTATATTGAATTTAAAGagtAAC
ACTGGCACCTACAGGTCAAATGAAACAGAAGAAGTTGAAAGAGACAGAGT
GAaggatttcttctttgattatTCGTATTGGTCCATGGAtccaaattctt
caaaatttgcAAGCCAAGCACAGGTTTACAGTGATCTTGGAAATGATGTT
GTTAACTCCGCAAAAGAAGGATATAATGCTTGCATCTTTGCATATGGCCA
AACCGGAAGTGGGAAAACACACACCATGATGGGACAACAGGGAAATGAAG
GACTTATTCCAAGGATTTGTgagaatctttttcaacaaatgcacgaaaaa
gaaaatgacggCATATCTTTCAGGGCTGAAGTCAGCTATTTGGAAATTTA
CAATGAAAGAGTGCGAGATTTACTGAGGGCCCATCAACCAAAATCTGGTC
AACCATCTCACACATTGAAAGTCAGGGAACATCCTCAAGGTGGACCATAC
GTGCAAGGTCTAACCAAACACATGGTGACTGATTACAATGCTATAGAAGC
TATCATGAAGCAAGGGAATGAGCTAAGAACAACTGCTTCGACTAACATGA
ACGATACCAGTAGTAGATCACATGCAATCTTCACCGTCAACTTCACACAG
GCAAAATTCATGCATGATATGCCAAGTGAGACGACAAGCAAGATCAATTT
GGTTGATCTGGCTGGAAGTGAGCGTGCTGATTCCACAGGCGCAACTGGTG
TCAGATTAAAAGAAGGTGCTAATATCAACAAGTCTTTGGTCACTCTTGGT
TCTGTCATCTCCTCACTAGCTGAAGCTTCAACCaacacaaaaaagaaaaa
tgtatttATCCCGTATCGGGATTCTGTTTTGACATGGCTCCTCAAAGATT
CTTTGGGTGGAAATTCGAAGACCATAATGATCGcagCCATTTCGCCAGCT
GATGTCAATTATGCAGAAACATTGAGCACATTGAGATATGCTAATCGtgc
aaaaaatatcatcaataaGCCTACTGTCAATGAGgatTCAAACGTGAAAT
TGATCAGAGANTCATTTCATTTCACttacattttttcatttcaggatTCA
AACGTTAAATTGATCAGAGATTTACGAGCTGAGatcgaaaaattaaaatt
tattattggtGATGATGTTCTTAGTGATGCGGAAAAGATTGCTGCCCGAA
AATTACACN
Run BLAST on NCBI

transcript from alignment at scaffold_459:94824..105511-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066735 ID=TCONS_00066735|Name=TCONS_00066735|organism=Clytia hemisphaerica|type=transcript|length=10688bp|location=Sequence derived from alignment at scaffold_459:94824..105511- (Clytia hemisphaerica)
GGTGCTAATTAATTAATTCAAATCAAAATGGCATCTGTCAAGGTTGCAGT
CAGAGTACGTCCTTTAAATAAAAGGTATGTCAACTATTTTCCTTGTAATC
CTCTAATAAATGGCTTTAATTAGTATTATATAAGTCGTAGTATATTTTGG
TTTGAGCTCTATTCATTGTGATGGAGCTTTTTTCAGTCTTTGCAGAAACT
ATCATTTACAATATTGGATTTGAAACTCCTTCCCTGTGCATGTGTCTTTT
TGTTTTAACAGTTACATTTCTTTATAACAAAAGGAAGTTAATCTGTCCTT
AATAAAAACTCATGTCAAAATAATTTCCTCTGTAGCAACATGATCCATAA
GCCATAAATCATTTCTATGAGAATTTAGATTTGAATGACCTTCAATGATT
TTAAGTTAAATTATGCTAAATTAAACTGAAAAATTAATTTTAACAAATAT
CGATACTCAAGAAAAAGGACTAATTAAAAAAAAAAATGTAAAATAAAGAT
AATTGCCTGAATGTAATATAGAAAACAATCTTTTTCACCATGAAAAAACA
ATTCCAATCTTCTTGAAAACAATATGACACAAATTCCCTTTATAAACCTT
ATGCCTAGTTTATAAGGCCACTTTTATGCTGCGTCTAATTTAAAAACTTT
GAAAATATAGTTCAATTCGGCAAAAGATCGGCCATATAAACAGGATTTTT
AAAGAAATTTGAGCCGAACAATTAAACCTGGCAAATTATTGTCAAACTTG
AGGCAAAAGAATAAATAAGAATGGCGTTGATTTATACGACACTGCTCTTT
TGCTGAGTCTAAATTTCTTTTAAAATGTTTTCTTATACAAAAAGGATATA
TTTTCTTTTTTCCCCATTGTTTTAAAGAGGGTTTCCCCTGGGGTTTTCTC
AGTAGTTTCATCTTTATTTGAACGTTGACTTTAAGTACCCTCACGCGAGG
TATATTTCTTCCCAAATAAAATCAAACTTAATAAAAAATTTGAGTTTATA
TGGCCAAATTTGTTAAATGTCGAGCTTATTGAACTTAAAAAAATAAATTA
GAAAAGTGGCCTTATAAACTAGGCCTTATTTAAACAACTAGATATTTCCA
GTCTATTATGGACGCTGTAAATCTTCCTTTTTAGTGAACCTATATATCAT
ATCAATCTTCAATGTTCAAATGATGCATGAATGTTGTAGAATAACTCTTT
TACTTTGATAGAGAAATCAACATGAACTCAAAATGCATCATTCAAATGGA
AGGGAAAAGGACAAGTATATTGAATTTAAAGGTATAACCAAATGCTTCTG
ATGGTTAATATTTAAAAAAAATTCTTTTTTTAATTTTGAAATTAAACATT
ATAACACTGATCAAAGTCAAACTATATAAAGCTCTTGGTTTCAAGATACC
CGTGGGCTATATCTTTGTCAATATTTGTTCAATCATATGCCATAGCTTTA
TGGTCTAAAACAAAGGAAAATTAACTCAATTTGCATCATTATAATTTTAT
TTGAAATATTTCATATTAAAAATATTTCAGAGTAACACTGGCACCTACAG
GTCAAATGAAACAGAAGAAGTTGAAAGAGACAGAGTGAAGGATTTCTTCT
TTGATTATTCGTATTGGTCCATGGATCCAAATTCTTCAAAATTTGCAAGC
CAAGCACAGGTTTCTTTTTAACAAATTAAATTACTAATGACAGTTGTTGA
AGTAAACAGACCATTTTTCATGCCATTTTAGCGTCTGGTTATCGGACGCT
GTCCTTCTTGAATTATGAAAAATAATGGAAAAAACAGCAGAAAAAGTGCC
CTTTTTGGTCTCTATTGGATGCTGCCCTGCCTTTCTAGAATCTGGCCTGA
TAAAGTGGATTTCATTCCTGCAAATTCAAACAAATTTTAGACAGCGAATC
AGGCATATTACAGTATATTATTTGTGTCATTTCAACTTTTCAGGTTAAAA
ATGTTTGCTCAAAAAGACTTTAGAGACCATCCATATTATAATAATAATTT
ACATTGGGTGTCTTAAAAAATTGTTATTGAAAAGATAATGGACTTAATTT
TAATCATACCCAGGTTTACAGTGATCTTGGAAATGATGTTGTTAACTCCG
CAAAAGAAGGATATAATGCTTGCATCTTTGCATATGGCCAAACCGGTTTG
TATATGTTGCTCTTCATTTTTCTTTTATTTGATGTCATAGATTCTAATAA
CTTGTCCACAAATCCAACTCTACTTTATTTCTTAAAATGTTATTTGATTT
TCTTTTTCAAAAGTTTTTTCTTTTCCAATCTTTTATTCTAGGAAGTGGGA
AAACACACACCATGATGGGACAACAGGTATCATTTCTAACCTTTATTTAG
GGGCAGCGGCTCTACTTTGAAAGCGGTAGGGCCATCCATGCTCTAATGTC
TAAGGAGATGGCACTGAAAATTAGCCCTTCTAGACTGCCGAAAACAGGTC
TTTTTCAAGGCTTTTAGGTAAATTTTGTTTTATGCTTTGAAAAAATGTGG
TCGGGCCAAGGCCCGGGTGGCCCTCCCCCCTCGCTGCCACGGCCCCTGTT
ATTAGCATTAGCATGTATAACATTTAAACAAAATTCCGAGTGAAATTGTC
AACTAAGAAAGAAAAGGAGAATTTTTTAGCACTGTGACCAGAGGCTCTGC
TGTGACGAATGCCTTTCAGAGTGTACAGTATCTGTACTAAAACTTTGGAA
ATTAAGTTTAGAAAAAAGAAGCTTATTAAATTGGGATATTATTTTTTCTT
TTTCTACAGGGAAATGAAGGACTTATTCCAAGGATTTGTGAGGTATTTCA
AATGAAAATTTTAATACATTTTTATTAACTACTGAAGTGACAATCTACAA
GGTCGACAAACTTCTTTTCATTCTTATTACAATTTTAAGGAACAATTTTT
TTTCTTTTTTAGAATCTTTTTCAACAAATGCACGAAAAAGAAAATGACGG
CATATCTTTCAGGGCTGAAGTCAGGTAAGTCTAAGACTTTTCAATAGAAA
TTGTCCAAATTAACTACAAAGGTCTTAAGTTTCCCACCATGAGATAAATT
TAAAAAAAGGAAATTTAATGCTCACATGTTTTCCTTTCCACTTTTTGAAA
CCAATGTTATATTTATAGAAGCTTTTTAACTGTTAAATTTATTAATTTCC
TTTTCTTAGCTATTTGGAAATTTACAATGAAAGAGTGCGAGATTTACTGA
GGGCCCATCAACCAAAATCTGGTCAACCATCTCACACATTGAAAGTCAGG
GAACATCCTCAAGGTGGACCATACGTGCAAGGTAAGAAGAGACAAAGGTG
TCTAGAATTTCATTCATTTTTGCGAAGAACATCTGGAGATTTCCATGCTT
GTTATTAGCACAGTTTTATGAATACAAATCACCCTCTACAAAACTAATCC
CTTTCATAGGTCTAACCAAACACATGGTGACTGATTACAATGCTATAGAA
GCTATCATGAAGCAAGGGAATGAGCTAAGGTATGATAGCTTATAAACTAA
AATTCAAAAGCAAAATATTGAATGAAAAGTTTGAAGGCATCATCACTGTT
TTTGATATTTTTGAAAATATCATTTTTAGAAAGCTTTGTTTGTAGAAAAT
ATGCTCAAAAACAATTAAAATGATTTTTGTTTTGGTGGGGGCCAAAGACT
TTACACAACACTTGGAGATCTGACAAGATAATTTGCACGATTTTGTTATA
AAGACTCAATCTAAAAATTGTGCTTTGTTGAAGGCTAGTTGTATTTAGTA
ACTATTTGATGAGACATGATCCTCTTATCTCATATAACTCTCTAATAGAA
CAACTGCTTCGACTAACATGAACGATACCAGTAGTAGATCACATGCAATC
TTCACCGTCAACTTCACACAGGTAATTATAACCCTTAGAAATACATTTGC
TTATGAAAGTATACATCTATTTTCCTTTATGACAAACCGGATATTTTTTT
TTGAGATCAGTTAGATCATGTTAAGGAAAATATGTTGATCTATGTTGATC
TATGTTGAATAACTTCAACCCTTCATTATTGATATTAATTCCATTTCTAT
CAATTTAAGGCAAAATTCATGCATGATATGCCAAGTGAGACGACAAGCAA
GATCAATTTGGTTGATCTGGCTGGAAGGTATGTGAAGTGTATCAAGATCA
AGTTATAGTTATCCAAACCTTGTTCCCGGCATATTACTGTATTGGACTTT
CAAAGCTTATTGATAGCCATAGTGTCCTCCCCCCCCCNNNNNNNNNNNNN
NNNNNGCTGGGGGAATTCAAAAAAGAGGGGGGAACCGAAAAATTTTGAAA
TATGGTGGGGGAAATAAAAGAGGGGGGAATGGAGAAAAATTTTGATTTTT
AGCGGGGGGAACCAACCCAGGAGGACACTATGATAGCGCCAAATATTATT
CTCTGGTGTCCATCAGTAAAAAAANGCCCTTTTTTCAAAGTATGGGGGAA
AATGAAAAATTTGAAATTTGCTGGGGGAAAATAAAGAGGGGGGAAAACCA
TAGATTTAGGAGATTTTAAANTCCTTGCACATATCAGGAGCTGTACCAGA
ATGTTTTGTCCAATTAAAGTTATATTTTAATATTGCTTAGTATTTATATA
AAACTACTTAATAACTATGAAGCTTTTTATTTAAGTTTTTATTTGTATCA
AAACTTATTTGCTCCCTTTACAGAGTACCCATAAGCATAGTAGACAGTTA
AGATTTGCTTCTTTTTAGTGAGCGTGCTGATTCCACAGGCGCAACTGGTG
TCAGATTAAAAGAAGGTGCTAATATCAACAAGTCTTTGGTCACTCTTGGT
TCTGTCATCTCCTCACTAGGTAAGTAAAACCTTTATGGGTTCTTTTAATG
ATGGATCCTGCCTCTGTTACTGATGGTTACAGGCAAGAGATCATTTTGAT
ACTTTTTCTTTGAAGATGGTTTTTTCTTATCAATAATCCTGTTAATGCTG
GTGAGTGAGCCGTGTTGTCCATATTATAGAGAAGAAAAAAGAAAAGAATG
AAACATGACGGACTGCCAAGAAATTTCCACATTCCATGAAATATGTTTTT
AAAAGAGTTTTGAGTTACCATCATGTCAACAGAAAAAATAAAGCTCAGAA
ATATATCAAGTAAACAGTTCTCATACGACGTAGGCATTGTCCAATTAATA
ATCATCATTTTGTTTTGAATCTTTTTTTCACAGCTGAAGCTTCAACCAAC
ACAAAAAAGAAAAATGTATTTATCCCGTATCGGGATTCTGTTTTGACATG
GCTCCTCAAAGATTCTTTGGGTGGAAATTCGAAGACCATAATGATCGCAG
GTAAAAATAAATAAACAAAAATGTTGCTTTTTAGGGATCATCTTAATGAG
TTGCCATAATAAGATACGATATTTTTGGACCTACCTGGAGGTCCTATAAA
TTAACCTTTGTTCGTTCGTCCGTCCGTCCGTCTGTCCGTCCGTCCGTCCG
TCCGTCTGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTCTGAT
TTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTCTGATTTTTGGCACAAAGATGCAAAATGGCAATGCCCAAAATGTGACG
GAGCCCGATTTTCGAGAAAAAAAAATTTTCCGGCCGAAAATGCCGGAAAT
ATGCCGGAAAACCCAGTTTTTTGACATTTTCTCGAGATTTCATCATTAGT
TTTTTCTGATTTTTTTCTTAAAGATGCATATTAACAATGCCCAAAACATG
ACCGGGTCCGATTTTTGAGAAAAAAATTTTTCCGGCCGAAAATGCCGGAA
ATATGCCGGAAATCACCGTTTTTCTGAATTTTCATTAGACTTTTTCCTTA
TAATTGGTTGTTTTTTCATTCAAAAACATTATTAATAGCAAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGATTTTTGAAGCCGG
AACTATTAAAAAATCGCCGGAACAACCTATATTCGCCGGAAAGACAGTAT
TTCTTGAATTTCTCGAGCTGTACATTATATTTTTTTATGAAATCTTGCAC
ACTGATGCAAAATGACAATACCTAAAATGTGACGAAGCCCGATTTTCGAA
AAACATTTTTTCTGGCCGAAAATGCCGGATATATGCCGGAAAAACCGGTT
TTTTGACTTTTTCTCGAATTTTCATCCTTAGGTTGCATACCTTTTAATGT
TCAAAACCAAAAAACTGAAACTGTTTCACTAAACTGCAAATGGTTTGGGT
TTGTTTACCTAAACACAGAAGCTGTTACATTGCGAATTCGATTTCTAGGA
TCTTGCCTAAAGTCACAGCAACGAATTTCAAAATGGTAGCCCAGCGGAAG
AAAACATTAAAGCTTAGGGCTTATGCATGCGTGCGCNNNNNNNNNNNNNN
NNNNNNNNNNNNGTGAACCAGCGTAAACAAAATGTAGTGCTTGGTTAGAA
TAATGGTTTAGCAAAACAAAAAATCAAATGGTGCAGTTTGTTTGCTAAAC
CCTTGGTTTAGCGAATGAAGAAAACACAGAAAAAAGACTGTTGGCTTTGA
TCGTCTGTTTAGGTAAACTTTTAAATGAATCAATACGTTCGCTAAACCCT
CTGTTTCACTTTTTTGGGTTTTTGGCTAAATGGTATGCACCCTTAGTTTT
TTCTGATTTTTTGCAGAGAGATGCGTATTCGCAATACTCAAAACATGACA
GAGTTCGATTTTTGAGAAAAATTTTTTTCCGGCCGGAAATATACCGGAAA
TCGCCGTTTTTGCAGATTTTCATCGGGCTTTTTCCTAACATTTCTTTGTT
TTTTCTCCAAAAAAAAATATCATTGATAGCAATTCCCACCATCAATCATG
ATTCGATTGTCAATAAAACTGATTTCTGCAGTCGGAACTTTCTATATCTT
TTTTCCCTTCTCCCCTTCCCTCTCCTTATCAAGAATCAATGATGAAATTT
AACGCGTTTTGCTTTTCACTTAGACTGGAGTCTTTTATAATGCGTGTAAT
ACTAATAATACCAATACTAATAATAATAATAATATACGGGATTTAGTTTG
TATAAACGACTGGAAGAATCCGGTGTTCCAGCCTTATAGATACAGGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTAAGTGCACAAAGGTTTCTAGACGACTAAAATTGTTCCAT
TCATTACTTTTTGCTTTATTTCTACTATGTATAAATTAGTCGTCTAGCTT
GCTAGACTACTTTTCACTAAAAATTATATTTTCTAACGGATTGTTTCCGT
TTTTCTCCTTATTGCTATCTAACTTTTATCATCAGGTAGGTTGAAAAACG
AATCTTTATCTATAAGAATCACTATATATAAGCATAGATCAATATTATTA
ATTTCGCATAGCGAAAGTATTACAATAGTCTTTCGCGGCGGTGTAATGAA
AAATTTAGAAAACGAAAGTACTTAGTACGGTGGACGAACTCACTAAATCA
ATTTACAAATTACACGCTTGTATAACCACGGACGATTTTCGCAGGTTTTC
TTTGTTTGGCTTCTGCTCATCCTCTAGCGAAAAAAGCTTCTTATTACGTC
ATATATCTTTGTGTCTTTCCCTTCACTTCACAATTTTGTTTTTTCTTTAT
TTTCTTATAAGAATATACTTTATAAGAATCAAATCAATAACTCTTGATAG
ACGGTGACATACATTTCGGTAATTAGTTCATACAAAGTAAACAAGGGTTG
GCGTACAATACGAGCATATTTATTTTTCTTATAAGCATTTACTTTATAAG
AATAAAATTAATAGCTCTTGATAGACGGTGATATACCTTTTGGTAATTAG
TTCTTACAAAGTAAACAAGGGATGGCGCACAATATGAGCATATTTATTTT
TCTTATAAGCATATTCTTTATAAGAGCACAATATGAGCATATTCATTATA
TTTATTTTTCTTATAAGCATAGAATTATTATCAGATAGAATGAATTCATG
CTTTTTTCCTCAAAATGAAGCGTGTCTGTAAAGGATCCCTTAGTTGCAAT
GGGAATTCAATTGCACGTGTGCAATGATAATGTCATTTCTTTGTTCTTAT
CGTATTTTAATTGCATATTTTCTCATACTTGATTGGATTCTTTTGAATTC
TCAAAAATTATGCACATAATTTGATTATTTTCAACTGGAAATTTCGGGCA
CTTCAGTCCCCTCAATGCAAATAAGAATTACATATTTGAAATCAGCTCAT
TTTATAGATTGACCAGTGTTGAAACTATTTGAAAACGCACTTCTAAGAAA
AGAAATTTGGGTGTCAAGGTTTCACCTAAATTAGTTATTCTTTCCGTATA
AACAAGGGTTGGCGTACAATATGGGCATATTCATTTTTCTTATAAGCATT
TACTTTATAAGAATCAAATCAATAACTCTTGATAGACGGTGATATACCTT
TCGGTAATTAGTACTTACAAAGTAAACAAGGGATGGTGGCGCACAATATG
AGCATATTCATTTTTCTTATAAGCATTTACTTTATAAGAATCAAATCAAT
AACTCTTGATAGACGGTGATATACCTTTCGGTAATTAGTTCTTACAAAGT
AAACAAAGGATGGCGTGCAATATGAGTATATTTATTTTTTATAAGCATAT
ACTTAATAAGAGTTCCTAAAAATTAAACAACAATTGTTCTTAAATTGGTC
CTATTGTTTTAGCAATTTTAAGCCTCGTTGTTCTTGTAAAATTGTTTCAT
CAAGGCTCAATGTAAAGTAGATTTCAGATTAGCTTCAATCTCTTCTTCAT
GTTTTCCCATGCAGTTCAAATTCTAGGCGAAATTTTCGACTTAAAGTCGT
CTTGTTATTTTTCTAAAAGAAGAAAATGTCACGGTAAAGCGCGATGGTTT
GAGTTATCTAGAAACCTTCTTTATTAAGCTGTGCGTTTTTCTGATAGTGT
ATTGTTTTTATAAAGAAAAGCGTTTAATAACTTTTAAAAAAAAGTCTTTT
TCAATAGTGTTGATAGTTTTCCCAATAGATATGCTTTCTATTATTTTTAT
TTTGTCCAGTTATGTCTTATGTGTTTCATTGTTTTAATGTTCATTGATTA
GTTTTGGTAACCAGGTAGGTCCATAAAAGTATCACTTGTTTATATATTGC
TTATATAGGCCCTCCCCAAAACACTTTTCAAGGCTTAACCCACATGGTGC
ATCGAAAGGAATTAAGCTGGAGTTTCCCAGGTTCGAGTGACGTCAAATTT
CAGATGTCATTGCATTGAGACGTACCAGATATAAGACATTGGACGCCATT
AAACCCGAGCCCAAGCCTTTTGTGGCGTTAGGTTCATTGATGTAATATCT
ATTTTTGATAATATGTACAGGGTGCTTTCCAAAAGTCCATAGAATTCTAC
AACACGTTGATATCTAGGGACGGAGCCAAGCTATTGGCTATTCCCAGGGA
ACCCACTGTAAACTTAAGTGAACTTTCAAAGAAAAAATTCTTCAGCTATT
CTTTTAAAATTTATTGGACTAAAAACTATTATTCCTATTTTTATTATTTT
TGTTATACAGTAGTTTTAATCTTTCCTCCCCCTCTTTTAGCCATTTCGCC
AGCTGATGTCAATTATGCAGAAACATTGAGCACATTGAGATATGCTAATC
GTGCAAAAAATATCATCAATAAGCCTACTGTCAATGAGGTATAATAATTC
AAAGTTAAAAAGATTTGCAATATTTGTCATGAGTAGGTGTTAATTAGGTA
TAATAGCGAGTCTATCTATGCATGTCTTCCTGTGACAGATACGGTTAGTT
TTTCAATTAGTTGCCTAGATCCTGACTGACTATGAGGTGAGGACGGCGGT
AAACCAGTACTTTTACTGGCCTTGATTTGTCAGGTCAGGACTGCGATCTG
TTCCAAATCGTGAGTCAACAGCAGTTTTTCTTAGTTTGGTGAAATCACTA
CCAAACTTGGCCAGTGGATGAACAAATTCTTTTGATCAAATTTCAAGCTT
TTTCACATTTTCAAATTATTTTGTTATTCATTTCATTTCACTTACATTTT
TTCATTTCAGGATTCAAACGTGAAATTGATCAGAGANTCATTTCATTTCA
CTTACATTTTTTCATTTCAGGATTCAAACGTTAAATTGATCAGAGATTTA
CGAGCTGAGATCGAAAAATTAAAATTTATTATTGGTGATGTAAGTGACTT
TAATGAACTATTAATTAGTGATAGGGAATGAAATTTCCTTTACAGACCCT
TCTTTGACATAGGCTTGTCGGAAGCATCTACATTTCAAAAATGGGATATA
GATCAAGAATTAAATTTAGCCTGAGGAAATAGATTATACATTTTAGGGAT
CTGACTCTCTGGAAAAGGTATCAGAATAGGGAAAATGCCTTGCTATTCAA
TAGGCTATTGGCCTGTTGACTCTACTTTATTTTTGTTTTGGTTATTGATA
GATTTCCTGTTGTTCCTATCGATTTTTATTACATCTAACAATGCTTCCCA
AGGGAAACCAAATGTAAAAAAAAAAGTCGAACGATTTGGTAAGTAGAACG
GGTGAAATGTGTTCAAAATAATCATCTTTCTTGAAATTCCAGGATGTTCT
TAGTGATGCGGAAAAGATTGCTGCCCGAAAATTACACN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041731XLOC_041731Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066735-exon-scaffold_459-1575043694:105438..105511TCONS_00066735-exon-scaffold_459-1575043694:105438..105511Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:104231..104300TCONS_00066735-exon-scaffold_459-1575043694:104231..104300Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:103853..103981TCONS_00066735-exon-scaffold_459-1575043694:103853..103981Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:103367..103448TCONS_00066735-exon-scaffold_459-1575043694:103367..103448Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:103186..103220TCONS_00066735-exon-scaffold_459-1575043694:103186..103220Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:102720..102752TCONS_00066735-exon-scaffold_459-1575043694:102720..102752Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:102538..102599TCONS_00066735-exon-scaffold_459-1575043694:102538..102599Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:102231..102352TCONS_00066735-exon-scaffold_459-1575043694:102231..102352Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:102033..102102TCONS_00066735-exon-scaffold_459-1575043694:102033..102102Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:101641..101713TCONS_00066735-exon-scaffold_459-1575043694:101641..101713Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:101385..101452TCONS_00066735-exon-scaffold_459-1575043694:101385..101452Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:100693..100793TCONS_00066735-exon-scaffold_459-1575043694:100693..100793Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:100212..100328TCONS_00066735-exon-scaffold_459-1575043694:100212..100328Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:95774..95871TCONS_00066735-exon-scaffold_459-1575043694:95774..95871Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:95273..95401TCONS_00066735-exon-scaffold_459-1575043694:95273..95401Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1575043694:94824..94869TCONS_00066735-exon-scaffold_459-1575043694:94824..94869Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:105438..105511TCONS_00066735-exon-scaffold_459-1510915933:105438..105511Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:104231..104300TCONS_00066735-exon-scaffold_459-1510915933:104231..104300Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:103853..103981TCONS_00066735-exon-scaffold_459-1510915933:103853..103981Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:103367..103448TCONS_00066735-exon-scaffold_459-1510915933:103367..103448Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:103186..103220TCONS_00066735-exon-scaffold_459-1510915933:103186..103220Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:102720..102752TCONS_00066735-exon-scaffold_459-1510915933:102720..102752Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:102538..102599TCONS_00066735-exon-scaffold_459-1510915933:102538..102599Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:102231..102352TCONS_00066735-exon-scaffold_459-1510915933:102231..102352Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:102033..102102TCONS_00066735-exon-scaffold_459-1510915933:102033..102102Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:101641..101713TCONS_00066735-exon-scaffold_459-1510915933:101641..101713Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:101385..101452TCONS_00066735-exon-scaffold_459-1510915933:101385..101452Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:100693..100793TCONS_00066735-exon-scaffold_459-1510915933:100693..100793Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:100212..100328TCONS_00066735-exon-scaffold_459-1510915933:100212..100328Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:95774..95871TCONS_00066735-exon-scaffold_459-1510915933:95774..95871Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:95273..95401TCONS_00066735-exon-scaffold_459-1510915933:95273..95401Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1510915933:94824..94869TCONS_00066735-exon-scaffold_459-1510915933:94824..94869Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:105438..105511TCONS_00066735-exon-scaffold_459-1491911889:105438..105511Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:104231..104300TCONS_00066735-exon-scaffold_459-1491911889:104231..104300Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:103853..103981TCONS_00066735-exon-scaffold_459-1491911889:103853..103981Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:103367..103448TCONS_00066735-exon-scaffold_459-1491911889:103367..103448Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:103186..103220TCONS_00066735-exon-scaffold_459-1491911889:103186..103220Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:102720..102752TCONS_00066735-exon-scaffold_459-1491911889:102720..102752Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:102538..102599TCONS_00066735-exon-scaffold_459-1491911889:102538..102599Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:102231..102352TCONS_00066735-exon-scaffold_459-1491911889:102231..102352Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:102033..102102TCONS_00066735-exon-scaffold_459-1491911889:102033..102102Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:101641..101713TCONS_00066735-exon-scaffold_459-1491911889:101641..101713Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:101385..101452TCONS_00066735-exon-scaffold_459-1491911889:101385..101452Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:100693..100793TCONS_00066735-exon-scaffold_459-1491911889:100693..100793Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:100212..100328TCONS_00066735-exon-scaffold_459-1491911889:100212..100328Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:95774..95871TCONS_00066735-exon-scaffold_459-1491911889:95774..95871Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:95273..95401TCONS_00066735-exon-scaffold_459-1491911889:95273..95401Clytia hemisphaericaexon
TCONS_00066735-exon-scaffold_459-1491911889:94824..94869TCONS_00066735-exon-scaffold_459-1491911889:94824..94869Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_459supercontigscaffold_459:94824..105511 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24202	0	0.297004	0.0885005	3.72162	2.80846	3.24416	2.3692	1.18126	1.45734	1.11791	1.19554	1.28965	0.809293	0.890367	1.17094	1.02126	1.27675	0.684696	2.06412	0.747596	0.238566	0	1.0581	1.69116	1.75347	0.730921	0.251131	0.592057	0.418282
Blast
[Close]
BLAST of TCONS_00066735 vs. Swiss-Prot (Human)
Match: KI16B (Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2)

HSP 1 Score: 514.612 bits (1324), Expect = 1.600e-169
Identity = 263/417 (63.07%), Postives = 310/417 (74.34%), Query Frame = 1 
Query:   28 MASVKVAVRVRPLNKREINMNSKCIIQMEGKRTSILNLKSNTGTYRSNETEEVERDRVKDFFFDYSYWSMDPNSSKFASQAQVYSDLGNDVVNSAKEGYNACIFAYGQTGSGKTHTMMGQQGNEGLIPRICENLFQQMHEKEN-DGISFRAEVSYLEIYNERVRDLLRAHQPKSGQPSHTLKVREHPQGGPYVQGLTKHMVTDYNAIEAIMKQGNELRTTASTNMNDTSSRSHAIFTVNFTQAKFMHDMPSETTSKINLVDLAGSERADSTGATGVRLKEGANINKSLVTLGSVISSLAE-----ASTNTKKKNVFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYAETLSTLRYANRAKNIINKPTVNEDSNVKLIRXSFHFTYIFSFQDSNVKLIRDLRAEIEKLKFIIG 1260
            MASVKVAVRVRP+N+RE ++ +K IIQME  +T+I NLK   G      T +  R+R K F +D+S++S D  S  + SQ  V+  LG DVV SA EGYNAC+FAYGQTGSGK++TMMG  G+ GLIPRICE LF +++E    D  SFR EVSYLEIYNERVRDLLR    K+      L+VREHP+ GPYV+ L+KH+V +Y  +E +M  GN  RTTA+T MND SSRSHAIFT+ FTQAKF  +MP ET SKI+LVDLAGSERAD+TGATGVRLKEG NINKSLVTLG+VIS+LA+     A+T  KKK VF+PYRDSVLTWLLKDSLGGNSKTIMIA ISPADVNY ETLSTLRYANRAKNIINKPT+NED                    +NVKLIR+LRAEI +LK ++ 
Sbjct:    1 MASVKVAVRVRPMNRREKDLEAKFIIQMEKSKTTITNLKIPEGG-----TGDSGRERTKTFTYDFSFYSADTKSPDYVSQEMVFKTLGTDVVKSAFEGYNACVFAYGQTGSGKSYTMMGNSGDSGLIPRICEGLFSRINETTRWDEASFRTEVSYLEIYNERVRDLLRRKSSKT----FNLRVREHPKEGPYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTIKFTQAKFDSEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVISALADLSQDAANTLAKKKQVFVPYRDSVLTWLLKDSLGGNSKTIMIATISPADVNYGETLSTLRYANRAKNIINKPTINED--------------------ANVKLIRELRAEIARLKTLLA 388
The following BLAST results are available for this feature:
BLAST of TCONS_00066735 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KI16B1.600e-16963.07Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF... [more]
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