TCONS_00066759 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066759
Unique Name	TCONS_00066759
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	741

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_46:158944..171657+

transcript sequence

>TCONS_00066759 ID=TCONS_00066759|Name=TCONS_00066759|organism=Clytia hemisphaerica|type=transcript|length=741bp
tacagtaaaaataaataaataaataatccAAGATGGCGTCGTCGAGTAAG
CAAGCAAAGAAAGAGGAGGAGAAAAAAGTGGGCGGTGATCATTTCAGAAG
GACTTGGGATGctgatgaatttgaaaagaaagctAAAGAACGTTTACAAG
AAGATTTAGATTTTCTTGACGGCAAAGCGTCCTCATCCAGTAGTGATCCA
CCAGTTCAACGTGAGAAGCTGAAAGCAAGAGATTACGCTGTAGACTTACA
ATCAAGATTGGGAAAATCACAAGTCATCACTAAAACTACTGCACTGGCCG
ATCAAGGTGGTTATTATTGCAATGTGTGTGATTGCGTGGTGAAAGATTCC
ATTAACTTCTTGGATCACATCAATGGAAAGAAGCATCAGCGAAACATGGG
AATGTCTATGAAAGTTGAAAGATCATCTCTTGACCAAGTCAAAGCTAGGT
TTGCCATGAATAAGAAGAAGAAGGAAGATAACGAGAAAAAGAAAGATTAT
GACTTCGATTCAAGAATTAAAGAACTAGAAGATGAGGATGACCGAGTACG
CCAACGTAGGCGTGATTCGAAATCAGAACGTAAACGCAAGCAACAAGAAG
CTTTACAAGAATACCAAGATGATGACGTGGCTGCAATGATGGGTTTTGGA
GGATTTGGCGGCTCAAAATAAATATAACACGCTATACTCATCAAAATTCA
TTTCTCGACTTGTCAAGTGATATCATCACCAAAACAAGATG

Run BLAST on NCBI

transcript from alignment at scaffold_46:158944..171657+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066759 ID=TCONS_00066759|Name=TCONS_00066759|organism=Clytia hemisphaerica|type=transcript|length=12714bp|location=Sequence derived from alignment at scaffold_46:158944..171657+ (Clytia hemisphaerica)
tacagtaaaaataaataaataaataatccAAGATGGCGTCGTCGAGTAAG
CAAGCAAAGAAAGAGGAGGAGAAAAAAGTGGGCGGTGATCATTTCAGAAG
GACTTGGGATGctgatgaatttgaaaagaaagctAAAGGTAATGATTTCA
TTTCCATATCAtaactagactggagtcgtttataatgcgtgtaatacagt
agtataggcgttatatgacaataagattattgttacgggatttttttgta
taaacgactaaaattgttccaacCATTAGTTTTTGCTAGTCGTCTAGCTT
ACTAGTCTATATCATAACTGAATGATTTTGTATCGAGTCAAACATGACCC
ATGAGCATTATTTCGATGCAACATCTGTCCTCACTTTGCTAGAGGTTCAA
TTTACCCCATCATGAGTTTAATTACTGTAATAAGTCATTCTTTAAATCTA
CCATCTTTTATTTTGTAGAACGTTTACAAGAAGATTTAGATTTTCTTGAC
GGCAAAGCGTCCTCATCCAGTAGTGATCCACCAGTTCAACGTGAGAAGCT
GAAAGCAAGAGATTACGCTGTAGACTTACAATCAAGATTGGGAAAATCAC
AAGTCATCACTAAAACTACTGCACTGGCCGATCAAGGTATAGATGCtcaa
tttctttaaaatgaaCGTTTTTTTTCCATATCCGTTCGGCTGTTCGTCTA
TACCGTAAGGTTCAAACCTGAAACATTAAATTTCACCATCATTCCTTCTC
TGCGATAAATTGTAGGATcgacttttaatttttcaccaTCGATTTTTATA
CATATCTAATAGTGATGAAATTCTAGAAAGTAAATGCATTGCTCTGTAAC
CGTAGATTCTTTAGTATGGAACTTGGGAAAATCATCCATTGATACAATTT
TATATTCGTTACTGTCTATTTCTTCTTCACAGGTGGTTATTATTGCAATG
TGTGTGATTGCGTGGTGAAAGATTCCATTAACTTCTTGGATCACATCAAT
GGAAAGAAGCATCAGCGAAACATGGGAATGTCTATGAAAGTTGAAAGATC
ATCTCTTGACCAAGTCAAAGCTAGGTTTGCCATGAATAAGAAGAAGAAGG
AAGATAACGAGAAAAAGAAAGATTATGACTTCGATTCAAGAATTAAAGAA
CTAGAAGATGAGgtttgtctgtctgtctgtctgtctgtctgtctgtctgt
ctgtctgtctgtctgtctaaCTATATGTTTGACTGTTGATACTCTAAACC
TGAGTGTATCGCACATTTATCGAAGCGTAGCACAGGcgatgaaatttgaa
atatccGTAGACATGGGTCAGTTTCCAGACCTCTAGTTGATTATATGCAT
GGCGTTGTTCTGTTGGTCCACCTGTTTAGTTGACTGCGTTCAACAGATAT
CCTTGACGAGTAACAATGTCTGTAAAATAGCGTAGAATATTTGGGGAGAC
TGATTTTtagtaccttaagagaagaaattttggcgaatcaGCTCATTCGt
caattttggtgcaatttggcgagaattaattttggcgaacgacccatatt
ttagaagaagaaaaagaggaaagaagggtttttaggagaaatagaggact
aaattgaaagaaaattaaatttggccagaatttatttttgcgaatgacct
ataaatctaaatttggcggaaagaaatgttggtgaatttggcaaaatttt
taggcaatttgccaaattcgccaaaatttttgtcctccaaaatttctttc
cttaagggctctgaccatagtgaatttttgatatttgccacttacaaaat
gTAAAGTTCTACTTGATATAGctcacaaaactgtggcatgttatacattt
tctgttaggccaattatccttgagtctgaaaatttatgaatcgcaatgaa
aaaatttgatgaaggagaaaatgaagacttttacaaagaagagtatttta
actttgaagagcttagtttcggcgcaaaaaaaacattttgaaaaaaaatt
tgcggtagatggtgtatcttttatcaaactaaaattatttttttggaaat
ttttctaaaagcttatttgtctcaaaatcttgaaaatagtgctttttgac
caaaattttccatcccaattcttcatagaaaaacagtcataacttttgat
gcattaatgtagaaaaattttccaaaaaaattaaaacaattcaATTCTTT
GTGGACAGTTTAAAagacttcaaaacaaaaaggttaattacccattaaaa
cttggcactttttatataaaagaaggtgatgcaacatattattaacgtct
ttttaaagttcataacgtcatttttgcaattaaattcttaattactttta
tATTAagagatttgattaaaaagcaatttataagggcaattctttgttaa
agtgTTAAGAACctaaataacttttatgttcaaatactaaaatcaaattt
CCGACCATGATcaccagagcccttaaggtaaTTGGTTTTTCCTTTATTAT
TgttaattcaatttttctattttgcagGATGACCGAGTACGCCAACGTAG
GCGTGATTCGAAATCAGAACGTAAACGCAAGCAACAAGAAGCTTTACAAG
AATACCAAGATGATGACGTGGCTGCAATGATGGGTTTTGGAGGATTTGGC
GGCTCAAAATAAATATAACACGCTATACTCATCAAAATTCATTTCTCGAC
TTGTCAAGGTTAGTGGCATTTTCAATGCTGTGGTATCACTATGGTCAACG
TTAAGCAAAGATATCAACATTGTGATAATGGGATTGCTCCCGAAACTTTC
TTTGAGAGAAAGCGAGGGAAAAGTTAGGTTGCTGGAAAATCGCAATTCCA
CGCGGGGAACAAACACCGAAAGTTTGAATTATTTAGTAGCTGGAATCAGA
TTAAACATTTAGCTTGAGACATTTCCAGAAGTACTACGCTAATGGTGATG
GCTATTGAAACGTGTAGGGATGGACGCTCAGGAAAACTACCTTAAatagg
aactaattttgacgagggccaaaaatttcaggaaagtttAATCTTGGCGA
GAACTAATGTTTTCGCGTAGCAGGGTAAATCAGTTCCATTTTCCGTTTTG
ACAAAGAATTGGGacgattttggaaaattacaaacgaaaattaattttgg
cgaggtAGCAATTATGCCAAATTCGCGTTACCCTCTTTTGAAAAGATACG
AAATAATCGAAGGTAAGAattaattttcgtcaaaattagttccttgGAAA
ATGTAAAATGAAGAACACTAGTAATATTATTTGAAATGGAACCGCTGTGT
CAAAAGATAAAAACTgtggttttttcaattttgatttatttttttatcat
gaATTCCAAAAGATACAGTAATAGATGACAAGAAAAAGGCGATGAAATTT
ATGTTAGGAAAAATCCTCACAAAATATTTGCCAATCGATACTAGGACTAT
TTAGACCTTTGGAAACATAAcctcaaaattttgaggaaCGGTGGTgcgat
ttaaaaataaaaaagtcttgttCGTATGTAGAGATCGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTAgttatgttttta
acattttgatttttggaaaatacatatttaTGAAGCACTACAACTGTATT
GTGCACTCTTTGGATGTTTGCTACGCATTATTCAttaaaagcttatttgt
ctcaaaatcttgaaaatagtgcttgaccaaaattttccatcccaattctt
catagaaaaacagtcataacttttgatgcattaatgtagaaaaattttcc
aacaaaattaaaacaattcaATTCTTTGTGGACAGTTTAAAagacttcaa
aacaaaaaggttaattacccattaaaacttggcactttttttataaaaga
aggtgatgcaacatattattaacgtctttttaaagttcataacgtcattt
ttgcaattaaattcttaattactcttataTTAagagatttgattaaaaag
caatttataagggcaattctttgttaaagtgTTAAGAACctaaataactt
ttatgttcaaatactaaaatcaaatttCCGACTATGATcaccagagccct
taaggtaaTTGGTTTTTCCTTTATTATTgttaattcaatttttctatttt
gcagGATGACCGAGTACGCCAACGTAGGCGTGATTCGAAATCAGAACGTA
AACGCAAGCAACAAGAAGCTTTACAAGAATACCAAGATGATGACGTGGCT
GCAATGATGGGTTTTGGAGGATTTGGCGGCTCAAAATAAATATAACACGC
TATACTCATCAAAATTCATTTCTCGACTTGTCAAGGTTAGTGGCATTTTC
AATGCTGTGGTATCACTATGGTCAACGTTAAGTAAAGATATCAACATTGT
GATAATGGGATTGCTCCCGAAACTTTCTTTGAGAGAAAGCGAGGGAAAAG
TTAGGTTGCTGGAAAATCGCAATTCCACGCGGGGAACAAACACCGAAAGT
TTGAATTATTTAGTAGCTGGAATCAGATTAAACATTTAGCTTGAGACATT
TCCAGAAGTACTAAGCTAATGGTGATGGCTATTGAAACGTGTAGGGATGG
ACGCTCAGGAAAACTACCTTAAataggaactaattttgacgagggccaaa
aatttcaggaaagtttAATCTTGGCGAGAACTAATGTTTTCGCGTAGCAG
GGTAAATCAGTTCCATTTTCCGTTTTGACAAAGAATTGGGacgattttgg
aaaattacaaacgaaaattaattttggcgaggtAGCAATTATGCCAAATT
CGCGTTACCCTCTTTTGAAAAGATACGAAATAATCGAAGGTAAGAattaa
ttttcgtcaaaattagttccttgGAAAATGTAAAATGAAGAACACTAGTA
ATATTATTTGAAATGGAACCGCTGTGTCAAAAGATAAAAACTgtggtttt
ttcaattttgatttatttttttatcatgaATTCCAAAAGATACAGTAATA
GATGACAAGAAAAAGGCGATGAAATTTATGTTAGGAAAAATCCTCACAAA
ATATTTGCCAATCGATACTAGGACTATTTAGACCTTTGGAAACATAAcct
caaaattttgaggaaCGGTGGTgcgatttaaaaataaaaaagtcttgttC
GTATGTAGAGATCGGCACACTCAAGATAATGTATACGTGTATATGTGtga
aatgtaaaaaataaaagccCAATGATCTTTCCGTTCTCCTATATTTAACG
TCCAAGGTGTAAAAGTTACTGTATAAAAGTTCAAGCGTTATTGAGTGCTT
CTTCCATATTACGTGGTTTGAATACACACTTATAATCCTCAGGGATACGA
CTCACACCGGTGTGTCCTTCCAAAGAAGGCAAATTCTCCTCGTCAGATGg
caaaatttcgaaattgtAAACAACACTTGAAAATATGATGAACAACTCCA
TTTTGGCCAACACATCTCCTGGGCATGATCGACGTCCCATAGAGAACGGG
TAGAAACCTTTATTCGTATTCCCTTCAAATTCGCCTGATTCGTTTAACCA
GCGTTGCGGGATGAATTCATCTGGATGGTCCCAGTAGTTTGGATCGTGGT
GAATGGCCCAGTAATTCACAATCACCTGAGCACCCTTAGGTATTGATTTT
GTTCCCAAGATGGTGTCCCTGGTGGTCTTGTATGGCACACCAAGTGGAGC
TATTGTAACATAACGGAAGACTTCGTTGATGAAAGCTCTGGTCAAATGAC
ATTTCACTTGATCTGACAACCTCGGTGATTTACCTTGGACATTTTGCTGT
AATTCGGTGTATATTTCATCTTGATACTGTGGCCAGTGTAAGAGAAACAG
AATGCTCCAATAAAGCATTGTTTTGACTGTTTCAGATCCACCAATGATAA
GATCTTGCATGGTTGCGATAATGTTTTCGTCAATGTTTGACCCTTCGTAA
CCGAGCTCTTTCCATTTCGATGCGTCAGCCTTTGAACTTAGAATCAAATG
GTCTATTAAATCCCTCAAATTTCTCTCATCAAATGTATTCTTATGTTgcc
aatatttttctttaaacacaGCCTGGATCCGCTTGGCTTCTTTTAGTAAT
CGTAAACTTTCACTCGGAAAGAATCGTAACCAAGGAAACACATCAATTGG
AACACCACTTCGAACGGCTGTAGTCAGGATTTCCGAGTATTTGTGTATTC
TGCGGAACTCTTCTTCATCCACTTGATATCGCTTGCCGAACTGCAGGCCG
CAAATTACGTTTGTCATTGAACATGCTGTTAAtgaataaaagttaaaaac
gaACTTAAAATTCGCAATAATCGACTTCACGATCGAAACCTTTTTCTACT
TGACGCTTTCACTTAAATAATCTACTGACCacgatttctttttgaaatta
taaGTTCTTAACTCACCAAATTGATATTGGGGGTCTAATGGTTCACCGTT
TTTCTTTGCGAGTACTCGAATCAAATCTTCGCTTTCTGCAATGGTTATCT
CTTCCATTTGTTGAAGGTGTGCACCATGCATTCTGATGTAAGGTGCTACA
AGTTTTCTCATGAATAATGAAGCCTTTGGGTTGATATTAAATGTGATCCC
ATTCCCTCCATCAATGAAGGATGTCGAGTAGAAGTTCGGTCTTGCACTGT
AATCCAGACCTGattcaataaaaatgaaatgatatGTTTAATTACTGTCA
ACTAGTTGACAGAGACTGCTCTGCATTGTCAACCTTCCACATACAAATAC
TTTGTAGCATACTGAGTAGAGCGCTAAATCCAACCTTCCACAtgagatga
gctggagtttttacaagatacttcacgaattggtcatttgaagtgataga
gatgacgcgttctttagaaaaagtaacaaaatttttttattattggttaa
cgaccaaccaaatcaaataagagcttgtaaaaactccagcttgtcccctt
CCACATACAAATACTTTGTAGCCTAGGTACTGAGTAGAGCGCTAAATCCA
ACCTGTCATCCAAAATGTGGTGCAAATTTAAGAGGGCATCGCTTGCCCTT
GCCTGGGAAAGTTTGAAGATTCCTATCTAGCCCTTGGCTGTATCTAGCCA
ACCAGCACACGTCACTTGAAAGGTCTTACCTTTGGACATCAAGGCTTCTT
TAGCATTTATGACATCATTGATAATAACGATTCTTTCCATTCCAAAACTT
AAACTGAAAACTTCTCCATATTTCTCACTCAAATCGCGTAAAGACGTAAA
AGGTTTCTTTCCAAGCACCagattcaaatttccaatgaGGGGCAAAGGAA
ACGCACCCTTTGGGTACTTGTGAAGTTCTGATAAATGCTTGACATATTGA
ATCAGGATGCACACTACTGGTCCAATCAACAGTGCTGTCAATATTTCCAC
AAACATTTCTGTACTTGCTAATACTTCAACACTGACCGCGGTCTATGCCT
TCAGTTCCTCTACTACATACAAACAAACCTTTCtaacaattttgtttttg
ttttgtatccAATTACTGTAATTGAAATACTTGAGTACCTTCAACATTCC
CCAACATTCATAACATTCCAATCTGTCAAAAAAATGCACTCAATAATTCA
ATAGTGTCGTTACCAATTCGATTTGTCTTTTCTAAGCTAGATGCTAGTGT
AGTGACTTGAGATTGCTGTTTTGTTGCACGTTTCTCATCCAACTTGTAAA
ACCTCTAAACATCGAACAGTTGAGAAACAATGTTTTGAGCTCCGATCTTC
ATTTGCTTATCACCCGGAAATGAGAATTATCGCGCGCTCTTCATCGCCCA
AAAGTATCGCTCAATAACTttataataatgttttacaCATTCCCTTTCCT
CAGGCTCGACGACCGTCACAGCGCTTTAGcactgaaaatttcattgataT
CGATACAAATCTATTTGTGAAATTGCGCAATTTGAGAAAAAGAAGATTTG
ATTGGGACTTGATTCCGCTCCCCCGCCAACTTCACTCCCGCCCATAAACC
CCCTTATATTTATATTGTAGTTCTTTTTGCCTTAGCTTTAAGCTTTTTGT
TATGGGTTGAACAAAGAATATTTATACAGACGACTTAGTTTCTAAAAGCT
GAAGTTTTTCTTTGGATCTATAGCTCTGTGTAGTGTAGATAAATATACCC
GAATCGTATTTCCTTTTTATCCCAATAATCTATCAAAGATGAAAAGGATA
AAAAAGAAGCTTTATAGATATGTACTTtagtttttattattatttttttc
ttcatatttccATCTGGCTTACAGCTGTGCTTTGAACCCCTAAACCATCT
GTAGGTTTCAGAAACCTCAAAAAACGGGGGTCTCTGTGTTTCTATTTAAT
TAAATGTTCACAAACGGCTTTCTACTGGTTTCAGGGATTTTAGAATGTCG
GATCTGCTTTACTTTATTAATTAATGAGCCATTTCttcgtgtttttattc
aattttctttgtggTATAATAAAGTTATTGAGTCCGGTGCTTTTATGATA
GGCTGTCATGAAAGAGTTTTTTAAAAGACTTTATTCTCGAGGTTGGAAAT
ATAGTTGGACCCCCTGAATATTCTCGCGTCAATTTTTATTAGAGCTAAAC
GTTGAAATGGAAGATTAAATtactttactttatttttgaacattttcttg
cAATATTGATTGGATTTAACAGAGGAtttttacacccccttctcacagac
caggTAGGATTTTCCAgttagtggggataaaaataacggactaaaactcg
atggggattgatgttCCGATGCTTTTTATAGAtgaggatttcaattcttt
tgttttcaagtcagaagattcagtggggctgggaaaaatagtaaatactt
tattgcatgaaaatttcgcggtttcgTGGTCGAGaccgaaaaaccgcgaa
attaaaatgccgcaaaaaacgaatttttcggTCAACTGCAAAATTAAAAT
GCATAAGAAAATCCGGGTTATTCCCTTTTTATTCCGAAATAGATAAAAAG
ATCTTGCCGAAGGGCTAGCGTTCAATCTCTAatctttctcaggcaagaaa
aagtgaagccttaaaaaatgcgccgcatttttgacgacagattgaatcta
gcaattcctttgctTACGATTAatattcttttcgaaatttagcggtaaat
tttagtttcaatctgtcatttgtgtaaaaaccaggcgagccgcNttcgaa
attaagcggtaaattttagtttcaatctgtcatttgtgtaaaaaccaggc
gagccgctcaaggccgcgcaaatttggtaggatttgttggcttcaaatcc
taccagggagattgacttctagtccttcgggcttatacttcattgggtcA
ACCCGTAAAAGAAAGTAGCGTCGCCGCTTATCTTGAAATGTCAGAGGAAG
ACCGGCAGCTCCATGGTTACCGACCCTGTGAATCAGATGAGGATaccgat
gatgatgatgatgacgatgatgaggTTTTCGAACCTGAGAGAAACTATTT
GGATGCACTTAACTGATTCAACttgttttaaaggaaaatatagTTAAAAG
GATAACTAAAACATCGCCTTATTTCTTGTTTGTGATAAAGAATAGctaaa
atttttgggaaaaatgcaattttttcctttcaatttttcggaaccgcgaa
attaaaatgcCGCGAAATACACTTTGTCTCCTGGACGCATTTcttgaacc
gcgaaattaaaatgcTGGGAAATgcaattttcggcaaaaaaaaccgcaaa
attttcATGCAATAAAGTATTTGGctgtgaggattggtttatgtaattat
tttcagtggggacaaaaattggaggacagttttccaccagggacggtatt
ttggccaaatttttcctgtggAAAGAGGTTCCAGTGGGTCTACGAGATGG
GGGCGTTTTTTTTAGTCGAAGCatagtacagggtgtccctaataaaagta
tcgagtttgaacatgcgattgagtagaaagttttaagtgtgtattcacaa
aattgtattttaagctctccctcttttttctttgtcattacgtaacaata
aaaacatactctgcctGTTTAAAAATACAACGAAATTACGATCatgagaa
aaacgcaacaattaaaacatgtttgtaaagaatcttatgtaaaactatga
aaataataaaaatggaatgtatggaacaataaaaaagtaaaactagGCAG
CGGTAGAAATGCTTAAAAACATCAACCACaaccttttgtaatgagcctat
gtgatggagaacgttcttatattttagcgataacacacacaaactttttt
actcaatcgcatgtttaaactcgatacttttattagggacaccatgtata
agaaagccgcggctggaatgagtacagctgaatttctgttgttctatcta
tgtcgtaagaacgaatagaacgaatttttttatggttcagtgacaatttc
cattgtcaatttaatttgacttttaacaaactccctcgttagacgtaatt
ttgctcataaacGCAAATCTCTTGATAATCCACACATTCATAacatcaaa
gtaaaagaaaagacacttggtttaaaagtactagaatgtcagaatgtcag
tgctttaagaacttgaagaaaattgagtgcctcgaaatgccttccttatt
attctgaaaaattgttactggtattagtaaataaatattcaagctgcatt
ctgtgaaaattccattcgaaaaacaacagtattgaggtgacagcaagcat
tcaaagtttaacatttgaaaattagttcttttaataaaatttgtgtTATT
TGGTCCtgaattcataaaaatttatttggaatttataaaGATACATTTCA
AATAAGGTAATAAGAGAGGACAGTGAGAAAAATTTGAGACTTGAAAAGTA
attgttcttcaattgaatattatgaacacttttaaggttaaggattttgt
tagcttcgacttagttcttataaaccacggggacacagatagaacatcca
ttaacgacaaaaacaatagcgtcatcattccagccgcggctttcttatac
tatggtcgAAGCCTGGACTATAATTATTACTTTGGAATACATAGGAATGT
CGCCTCGGACGAGAACATTCTTCTTGAGTTTATCCTCTTAGCTGAAAGTc
gtcaatatttatttttgtgagCTAGCCGTTGGTGATTTAATTTTGTAGTT
TGAAGTAATTTTACGCACACGGTTGACAGTAGTGTTGTGGCGTGGTATTG
GAGAATACTCCTTAGGTTGGTCGCGCTCTTTTTTCTTATCTGTTCTTTCG
TTCCACAAACTgttcttttaacaaaatctttacTTATTCAAATAACCACG
AATGTCATGGCACCACGCTTCTGGAATTTAACTTAAGCCCAATCTTATTC
CATCACTTTTATAAAGCTTTAAACGCAAAAAGTTCATAGGGTATAATTCG
ACGCAATCGGAAGCTTGAGGACCTTGAGAGCTGTCTAATGGCGGATCGGC
GGCCGCCCATGCTAAGGCTCTAAAGGAACGGGCCAATTTCACATCGGAGA
AAAATGACTGTTTTTCACCGAGTGGCGAGGCAGCTGCGACAGGGCTGTGT
GAAATTGATGGTTGGTGGAGGAGGAGTGGAATCATACCTTTttcggagtg
gcggaatttgacaaaaatttggacggaattttggattttctatATCGGAT
ACGGAAAATTGGTTTGCTTCAATCCGGAAAAACAGAATTAGGCAAAAAAT
CAGAATTCGGAAAAAATATTCTGAATTTCCTGAATTTTTGACGGAAATCA
GGAATTTTAAAGGAATTTCCGGTGGTGGAATTTTTGTGCTCTTTTAGATA
GTTTGACGGTATTTAAAGAAAGAATTGACTGTATGGCGGAATCAgatacc
ccctgaaacccccttCATTAAATTGGTATCTCGGTTGTTTTATACGGCGT
GCTTTCATACGTATGCGAATCGTAAGTGCGAAAATAGAACATAAATGGAC
CTCTTTTATCAACTGTTTGACCAGAGAGGAGGCTTTAAAACAGCTGGTTA
TTCTATCGATATATAGAGAATCGAAAAAGTAAACGAAGAAAAATCACTAG
GGGAAAAGAAAAGGGGGTTATAAATGAGTGCAAATACGAAATATTAAAAA
GGGATAGGAATTTTAAGCAAAGAGGATCTTTTACAATTCTGTCAGTATTC
tcaactttttcttcttctttattttctttggaATAAAATACACATGTTGT
TCAAATGGATGTATTTTGTTTCACAAAGAGTTGAGTTAGACCAGCTTTTC
TTCTCATATTTTTAGGGGAccgataaagaataaaaagaaagaaaaaagta
aaaaaaaaaaataatttcagtcAGAATTATGAAAGATTTCTTTTCCCTCT
CATTATTATCAAGATTTCATTCCCTATCCCTCATTTCTAGTGATATCATC
ACCAAAACAAGATG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041749	XLOC_041749	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_46	supercontig	scaffold_46:158944..171657 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.67664e-07	0	0	0	7.01707	5.98672	10.867	10.4613	4.95822	5.60429	7.21804	9.9072	0.197187	0	1.22628e-05	1.88788	9.62775	4.96564	6.24904e-07	1.7478	0	1.12007	0	0	6.04081	9.08797	0	0	0	2.64461e-09

Blast

[Close]

BLAST of TCONS_00066759 vs. Swiss-Prot (Human)
Match: ZMAT2 (Zinc finger matrin-type protein 2 OS=Homo sapiens GN=ZMAT2 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.266e-55
Identity = 95/145 (65.52%), Postives = 115/145 (79.31%), Query Frame = 3

Query:   93 FRRTWDADEFEKKAKERLQEDLDFLDGKASSSSSDPPVQREKLKARDYAVDLQSRLGKSQVITKTTALADQGGYYCNVCDCVVKDSINFLDHINGKKHQRNMGMSMKVERSSLDQVKARFAMXXXXXXXXXXXXXYDFDSRIKEL 527
            FRR WD DE+EK A++RL E+ +  DGK        PV+RE L+ RDY VDL+S+LGK+ VITKTT  ++ GGYYCNVCDCVVKDSINFLDHINGKKHQRN+GMSM+VERS+LDQVK RF +   KK+  EK+KDYDF+ R+KEL
Sbjct:   12 FRRKWDKDEYEKLAEKRLTEEREKKDGKPVQ-----PVKRELLRHRDYKVDLESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEV--NKKKMEEKQKDYDFEERMKEL 149

The following BLAST results are available for this feature:

BLAST of TCONS_00066759 vs. Swiss-Prot (Human)

BLAST of TCONS_00066759 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZMAT2	1.266e-55	65.52	Zinc finger matrin-type protein 2 OS=Homo sapiens ...	[more]

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TCONS_00066759 (transcript) - C. hemisphaerica