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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066790 ID=TCONS_00066790|Name=TCONS_00066790|organism=Clytia hemisphaerica|type=transcript|length=2662bp
GAAATTCAACTATGAATGTTGTATTGACAACCCAGGTACAAAAGATTGAA
AGAGCTAATATTTGGGTTCTACATTATTCGACTGTCACATAGTATAAATA
AATCATTTAAAATGTCTGAACAGTTATTTCAAGAAGCATCTACAGCTTTT
CAAGAATGGTGTAAAAGAAATAGTGTTCCAGTTCTCTCGTTGGATCCTAC
AAGTACTGAAAAAGATGATCTCAAATCAATAGTACAATCCATTGGAAATG
CACGGTTTGTAGCCATCAGTGAAGGGTTTCATAATTGTAAGGAGATGATG
AGTTTACACCATAGGATCATTCGCCACCTGGTTGAAGAATGTGGATTCAA
CATTGTGTTGAGTGAAAGTGGGTTCCCCGAGTCCCTTTATATCAATGATT
ATATTCGAGGGAAATCAATACCAGAGGAGATTGATGTATGGAAAAATGGT
TTAAACAAAATGTACAGTGCCTGGAGAGAGGGACAAGCTCTGATTGAATA
CCTCAAGAAGAATAATAAAGATTATGGTAATTCTTTAGAGTATTATGGTG
TAGATATTGGAGGATTTTATCAAGACTGGGTCACTCCtttcaatataatt
ttcaaatacaTCAAGACTGTTGATGAAGACTATTGTAAAGATCTAGAGTC
AAAATTATTGCCATATCTCAACCAAATGTCCACAAATGCACGAAAAAACT
AtgctgaaaattttgatttgcaCCAAAAAGCTTTACTATCTGCTATATTG
GACGAAGCTGTAAGTTACTTTGGCTCCAAAGCTGATGAGTATGTATCCAG
AAGCAGTAAAGAAGATTATGAAAAGATTCGACAGTCATTGACTTCAATGC
AGTTGGCAGAAAACTATTATCGAAATTATGATACTGTTTCTAAGAAGTAT
GTAGGTTTGAATGGAAGAGAGATTGCAATGGCCCAGAATTGCTTGTGGGT
CTTAAACAAAAGAAGTGATGCCAAAGTTGTTTGGATAGATCACGTGATTC
ATACCAAAACAAAAAGCCAACTTCAGGATGGTGTATGGGGAAACTTCACA
CCAGCAGGTCAACTAATAAAGCAAGCTTTAGGAAAGGATTACTACGGTAT
TGGTATGGTGTATGGATCTGGCCAATTTTGGAATAAATGGCAACGTCCTG
CTGAAAGGTTCATTGACAAAATCCCTGAATGGGATGAAAAAAGGaaacaa
aaagaaaatagaatGAATGACCCAGCACCAGTGATATATGGTCTTGAATT
TCAAGCTCGTTCGTTATGCCCTCAATTTGGCGAAACCGAAGCAATACGGT
TTTTAGTTGGTACCCAATCATTACGTAATGATAACCAAGTCcatttgatt
gattttgaaGACGAAAGTAACCTAGTCACAAAGCATGTTTTTTCGCACAC
GCCTGGTGAAATATGGAATATAGCATCGAATCCTTCAGATAAGAATATAT
TAGCCACGTGTTATAGTAAGATTATAGATGGTAAAACGAAACGTTTTGCA
GCAATGTGGAGGATTCCACCCTTAGATGAGACAGCACCTCCTGTTTATGA
GTTAACACCTGGTGATAATAACGGTAAATGCGTTTCGTTACAGCATGTAT
GTGAGTTGGATGCAGGGCATGGTGATGTCAAGAAAGTCATGTGGAACCCA
TCCAGTGATAACGACAAGCTATTAACCATCTCTGAAAGACATATTGATTT
ATGGCAAACTTCAAATACGGGTGCTGATCATGTTGATACTATAACCTTAG
AAGGAAAAGCACAATTACAATACAGTGTCGGTAGATTCAATCCACACCAT
GGTGGTTCGCAAATTGCCACCGGTATTGACTGTCACATTAAAGGATATGA
TTTGAGGAGCAtgtcatcttcattttctatagAGAATGCTCATTCACAAT
TAGTTCGTGACTTAGATATGAATCCGAACAAACAATACTATCTAGCTAGT
TGTTCGGATGATTGTAAAGTCAAATTTTGGGATATTCGGAACACGAAAGA
ATGCCTAATGACGCGTTCAGATCACTCACATTGGGTATGGAGTATCAGAT
ATAATAATTTTCATGATCAATTGATTTTGACGTCGAGTAGTGACAGTCGT
GTCATTTTATCCAATATTGCATCCTTATCTTCGGAGCCTTTCGGTCACCT
TGACGACGAAGATGAGGAGGAAGAAAAACCAAGAGAACCAATTCCTGATA
GATTGATATCGACTTTCGAGGAACACGAAGACTCGGTGTATGCTGTGGAA
TGGTCAAGTGTTGATCCATGGATCTTTGCTTCTCTTTCATATGATGGACG
TTTGGTCATCAATCGAGTTCCAAGAGTTGAGAAATATAAGAttcttttat
agttttgattttgagcttttgaaagaatttggGTATGAAGTTTAAAGGAA
GGGTATTTTTCTGGAGGTCATTTTCGGTCAAGTTATACCACATTACAGCA
AAATTGAGATTTTGACGGCAAATAATTGGAGTTAATCCAGTTATTTGTTA
TTGGGAATCAGCTGGAATATTAGTATTTTATGTATTATAATGGAattttt
ttggctaatttatAACAGCAGTTCTAATTTGTAAGATAATTTTTCTAtca
gtttagttttttttggataattttgtgTCGATCGTTGGGATTTTATCATA
TTTCATTCCCCC Run BLAST on NCBI protein sequence of TCONS_00066790-protein >TCONS_00066790-protein ID=TCONS_00066790-protein|Name=TCONS_00066790-protein|organism=Clytia hemisphaerica|type=polypeptide|length=746bp
MSEQLFQEASTAFQEWCKRNSVPVLSLDPTSTEKDDLKSIVQSIGNARFV
AISEGFHNCKEMMSLHHRIIRHLVEECGFNIVLSESGFPESLYINDYIRG
KSIPEEIDVWKNGLNKMYSAWREGQALIEYLKKNNKDYGNSLEYYGVDIG
GFYQDWVTPFNIIFKYIKTVDEDYCKDLESKLLPYLNQMSTNARKNYAEN
FDLHQKALLSAILDEAVSYFGSKADEYVSRSSKEDYEKIRQSLTSMQLAE
NYYRNYDTVSKKYVGLNGREIAMAQNCLWVLNKRSDAKVVWIDHVIHTKT
KSQLQDGVWGNFTPAGQLIKQALGKDYYGIGMVYGSGQFWNKWQRPAERF
IDKIPEWDEKRKQKENRMNDPAPVIYGLEFQARSLCPQFGETEAIRFLVG
TQSLRNDNQVHLIDFEDESNLVTKHVFSHTPGEIWNIASNPSDKNILATC
YSKIIDGKTKRFAAMWRIPPLDETAPPVYELTPGDNNGKCVSLQHVCELD
AGHGDVKKVMWNPSSDNDKLLTISERHIDLWQTSNTGADHVDTITLEGKA
QLQYSVGRFNPHHGGSQIATGIDCHIKGYDLRSMSSSFSIENAHSQLVRD
LDMNPNKQYYLASCSDDCKVKFWDIRNTKECLMTRSDHSHWVWSIRYNNF
HDQLILTSSSDSRVILSNIASLSSEPFGHLDDEDEEEEKPREPIPDRLIS
TFEEHEDSVYAVEWSSVDPWIFASLSYDGRLVINRVPRVEKYKILL Run BLAST on NCBI transcript from alignment at scaffold_46:260326..264074- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066790 ID=TCONS_00066790|Name=TCONS_00066790|organism=Clytia hemisphaerica|type=transcript|length=3749bp|location=Sequence derived from alignment at scaffold_46:260326..264074- (Clytia hemisphaerica)
GAAATTCAACTATGAATGTTGTATTGACAACCCAGGTACAAAAGATTGAA
AGAGCTAATATTTGGGTTCTACATTATTCGACTGTCACATAGTATAAATA
AATCATTTAAAATGTCTGAACAGTTATTTCAAGAAGCATCTACAGCTTTT
CAAGAATGGTGTAAAAGAAATAGTGTTCCAGTTCTCTCGTTGGATCCTAC
AAGTACTGAAAAAGATGATCTCAAATCAATAGTACAATCCATTGGAAATG
CACGGTTTGTAGCCATCAGTGAAGGGTTTCATAATTGTAAGGAGATGATG
AGTTTACACCATAGGATCATTCGCCACCTGGTTGAAGAATGTGGATTCAA
CATTGTGTTGAGTGAAAGTGGGTTCCCCGAGTCCCTTTATATCAATGATT
ATATTCGAGGGAAATCAATACCAGAGGAGATTGATGTATGGAAAAATGGT
TTAAACAAAATGTACAGTGCCTGGAGAGAGGGACAAGCTCTGATTGAATA
CCTCAAGAAGAATAATAAAGATTATGGTAATTCTTTAGAGTATTATGGTG
TAGATATTGGAGGATTTTATCAAGACTGGGTCACTCCTTTCAATATAATT
TTCAAATACATCAAGACTGTTGATGAAGACTATTGTAAAGATCTAGAGTC
AAAATTATTGCCATATCTCAACCAAATGTCCACAAATGCACGAAAAAACT
ATGCTGAAAATTTTGATTTGCACCAAAAAGCTTTACTATCTGCTATATTG
GACGAAGCTGTAAGTTACTTTGGCTCCAAAGCTGATGAGTATGTATCCAG
AAGCAGTAAAGAAGATTATGAAAAGATTCGACAGTCATTGACTTCAATGC
AGTTGGCAGAAAACTATTATCGAAATTATGATACTGTTTCTAAGAAGTAT
GTAGGTTTGAATGGAAGAGAGATTGCAATGGCCCAGAATTGCTTGTGGGT
CTTAAACAAAAGAAGTGATGCCAAAGTTGTTTGGATAGATCACGTGATTC
ATACCAAAACAAAAAGCCAACTTCAGGATGGTGTATGGGGAAACTTCACA
CCAGCAGGTCAACTAATAAAGCAAGCTTTAGGAAAGGTACAGTTTGCATA
TTGTCTTTGTGTCTTTTTTGTCAAATTTAAGTGTTGTTTGGTGTTTCAGT
ATCTAACATTCCCATTAACTGTTCCAACCTTAATTATTTTGAATAATTGC
TACCTTTTATGTAGCAAACCAGAGCAAACTGTAAAGCAAAAAGCAAATTG
TTTTCTTAAAATTGTATCGCTCTTGAAGCATCGCTTAACCTTCAATACAT
ATCTTTTATGTTATGTGAATATATCTGTGAATTAGCAAATGATTTTATAT
GCTCCTCTCTCCTGCAGGATTACTACGGTATTGGTATGGTGTATGGATCT
GGCCAATTTTGGAATAAATGGCAACGTCCTGCTGAAAGGTTCATTGACAA
AATCCCTGAATGGGATGAAAAAAGGGTCAGTTTTGAGAGTGAAATTACTA
AATCCCTACCTGGAAACGGGAACTATTTCATTGATTTTTCTGCAGCACCA
AAGAATTTTAAACTGCAATATTTTATGTCAACACCGTTATCTCTACGGGA
AAACGATTATTATATGCAAATCGAACCGCAGGAATGGGATGGTTGCATCT
ATCTTCAAATTGCATCGCCTGCAACCCCAATTTAGTGACTAACAAATGAG
TCTTCTTGAAGTAAACCACAATTTTTCATATTATAAATTTTTTGTATCAT
ATTTGCTTTTTACTCTTTGCAACATTTATTATCATATTTCTCAAAATGTC
TTAGGTATTTATTGGCTGATTTCAAAATTTATTTGTCCAGGGGGGGGGGG
GGTCATGCAGTTACTATGTGAACACTATGACACTTAGTACGTGGTGGTGT
AACAACTAAAAGAATTTAAAACAGTTACTCCAAAGTGGAGTAAATGCAGA
TTTTTTCACTTTTTTGAAAAATTTCCCTAAATTTCCGGCAAAAATTTGAA
ATTTTCGAAGAAAAATTGAATTGTTTTTGGAAAAATATCTGAAATTTTTC
ATGAAAATAAGTTTTTTGTCATATTTATGAAAATAGAAATCGTGGAATGC
TTTGATAGTGACTTTAACCAAGTACATAAACTTATTCCAACAATTTTTAA
ATACAAAAATCAAATTTTCGACCAGTAGGTATGTCTTATATATCTAAAAA
ATCCGCAAATTACCCATTTTATGGGGTGGTGTACCCCTTAACTAAATTAA
CTAAAATAATATTATTTTTCTTTCTTTTCAGAAACAAAAAGAAAATAGAA
TGAATGACCCAGCACCAGTGATATATGGTCTTGAATTTCAAGCTCGTTCG
TTATGCCCTCAATTTGGCGAAACCGAAGCAATACGGTTTTTAGTTGGTAC
CCAATCATTACGTAATGATAACCAAGTCCATTTGATTGATTTTGAAGACG
AAAGTAACCTAGTCACAAAGCATGTTTTTTCGCACACGCCTGGTGAAATA
TGGAATATAGCATCGAATCCTTCAGATAAGAATATATTAGCCACGTGTTA
TAGTAAGATTATAGATGGTAAAACGAAACGTTTTGCAGCAATGTGGAGGA
TTCCACCCTTAGATGAGACAGCACCTCCTGTTTATGAGTTAACACCTGGT
GATAATAACGGTAAATGCGTTTCGTTACAGCATGTATGTGAGTTGGATGC
AGGGCATGGTGATGTCAAGAAAGTCATGTGGAACCCATCCAGTGATAACG
ACAAGCTATTAACCATCTCTGAAAGACATATTGATTTATGGCAAACTTCA
AATACGGGTGCTGATCATGTTGATACTATAACCTTAGAAGGAAAAGCACA
ATTACAATACAGTGTCGGTAGATTCAATCCACACCATGGTGGTTCGCAAA
TTGCCACCGGTATTGACTGTCACATTAAAGGATATGATTTGAGGAGCATG
TCATCTTCATTTTCTATAGAGAATGCTCATTCACAATTAGTTCGTGACTT
AGATATGAATCCGAACAAACAATACTATCTAGCTAGTTGTTCGGATGATT
GTAAAGTCAAATTTTGGGATATTCGGAACACGAAAGAATGCCTAATGACG
CGTTCAGATCACTCACATTGGGTATGGAGTATCAGATATAATAATTTTCA
TGATCAATTGATTTTGACGTCGAGTAGTGACAGTCGTGTCATTTTATCCA
ATATTGCATCCTTATCTTCGGAGCCTTTCGGTCACCTTGACGACGAAGAT
GAGGAGGAAGAAAAACCAAGAGAACCAATTCCTGATAGATTGATATCGAC
TTTCGAGGAACACGAAGACTCGGTGTATGCTGTGGAATGGTCAAGTGTTG
ATCCATGGATCTTTGCTTCTCTTTCATATGATGGACGTTTGGTCATCAAT
CGAGTTCCAAGAGTTGAGAAATATAAGATTCTTTTATAGTTTTGATTTTG
AGCTTTTGAAAGAATTTGGGTATGAAGTTTAAAGGAAGGGTATTTTTCTG
GAGGTCATTTTCGGTCAAGTTATACCACATTACAGCAAAATTGAGATTTT
GACGGCAAATAATTGGAGTTAATCCAGTTATTTGTTATTGGGAATCAGCT
GGAATATTAGTATTTTATGTATTATAATGGAATTTTTTTGGCTAATTTAT
AACAGCAGTTCTAATTTGTAAGATAATTTTTCTATCAGTTTAGTTTTTTT
TGGATAATTTTGTGTCGATCGTTGGGATTTTATCATATTTCATTCCCCC Coding sequence (CDS) from alignment at scaffold_46:260326..264074- >TCONS_00066790 ID=TCONS_00066790|Name=TCONS_00066790|organism=Clytia hemisphaerica|type=CDS|length=6723bp|location=Sequence derived from alignment at scaffold_46:260326..264074- (Clytia hemisphaerica)
AAACAAAAAGAAAATAGAATGAATGACCCAGCACCAGTGATATATGGTCT
TGAATTTCAAGCTCGTTCGTTATGCCCTCAATTTGGCGAAACCGAAGCAA
TACGGTTTTTAGTTGGTACCCAATCATTACGTAATGATAACCAAGTCCAT
TTGATTGATTTTGAAGACGAAAGTAACCTAGTCACAAAGCATGTTTTTTC
GCACACGCCTGGTGAAATATGGAATATAGCATCGAATCCTTCAGATAAGA
ATATATTAGCCACGTGTTATAGTAAGATTATAGATGGTAAAACGAAACGT
TTTGCAGCAATGTGGAGGATTCCACCCTTAGATGAGACAGCACCTCCTGT
TTATGAGTTAACACCTGGTGATAATAACGGTAAATGCGTTTCGTTACAGC
ATGTATGTGAGTTGGATGCAGGGCATGGTGATGTCAAGAAAGTCATGTGG
AACCCATCCAGTGATAACGACAAGCTATTAACCATCTCTGAAAGACATAT
TGATTTATGGCAAACTTCAAATACGGGTGCTGATCATGTTGATACTATAA
CCTTAGAAGGAAAAGCACAATTACAATACAGTGTCGGTAGATTCAATCCA
CACCATGGTGGTTCGCAAATTGCCACCGGTATTGACTGTCACATTAAAGG
ATATGATTTGAGGAGCATGTCATCTTCATTTTCTATAGAGAATGCTCATT
CACAATTAGTTCGTGACTTAGATATGAATCCGAACAAACAATACTATCTA
GCTAGTTGTTCGGATGATTGTAAAGTCAAATTTTGGGATATTCGGAACAC
GAAAGAATGCCTAATGACGCGTTCAGATCACTCACATTGGGTATGGAGTA
TCAGATATAATAATTTTCATGATCAATTGATTTTGACGTCGAGTAGTGAC
AGTCGTGTCATTTTATCCAATATTGCATCCTTATCTTCGGAGCCTTTCGG
TCACCTTGACGACGAAGATGAGGAGGAAGAAAAACCAAGAGAACCAATTC
CTGATAGATTGATATCGACTTTCGAGGAACACGAAGACTCGGTGTATGCT
GTGGAATGGTCAAGTGTTGATCCATGGATCTTTGCTTCTCTTTCATATGA
TGGACGTTTGGTCATCAATCGAGTTCCAAGAGTTGAGAAATATAAGATTC
TTTTATAGGATTACTACGGTATTGGTATGGTGTATGGATCTGGCCAATTT
TGGAATAAATGGCAACGTCCTGCTGAAAGGTTCATTGACAAAATCCCTGA
ATGGGATGAAAAAAGGATGTCTGAACAGTTATTTCAAGAAGCATCTACAG
CTTTTCAAGAATGGTGTAAAAGAAATAGTGTTCCAGTTCTCTCGTTGGAT
CCTACAAGTACTGAAAAAGATGATCTCAAATCAATAGTACAATCCATTGG
AAATGCACGGTTTGTAGCCATCAGTGAAGGGTTTCATAATTGTAAGGAGA
TGATGAGTTTACACCATAGGATCATTCGCCACCTGGTTGAAGAATGTGGA
TTCAACATTGTGTTGAGTGAAAGTGGGTTCCCCGAGTCCCTTTATATCAA
TGATTATATTCGAGGGAAATCAATACCAGAGGAGATTGATGTATGGAAAA
ATGGTTTAAACAAAATGTACAGTGCCTGGAGAGAGGGACAAGCTCTGATT
GAATACCTCAAGAAGAATAATAAAGATTATGGTAATTCTTTAGAGTATTA
TGGTGTAGATATTGGAGGATTTTATCAAGACTGGGTCACTCCTTTCAATA
TAATTTTCAAATACATCAAGACTGTTGATGAAGACTATTGTAAAGATCTA
GAGTCAAAATTATTGCCATATCTCAACCAAATGTCCACAAATGCACGAAA
AAACTATGCTGAAAATTTTGATTTGCACCAAAAAGCTTTACTATCTGCTA
TATTGGACGAAGCTGTAAGTTACTTTGGCTCCAAAGCTGATGAGTATGTA
TCCAGAAGCAGTAAAGAAGATTATGAAAAGATTCGACAGTCATTGACTTC
AATGCAGTTGGCAGAAAACTATTATCGAAATTATGATACTGTTTCTAAGA
AGTATGTAGGTTTGAATGGAAGAGAGATTGCAATGGCCCAGAATTGCTTG
TGGGTCTTAAACAAAAGAAGTGATGCCAAAGTTGTTTGGATAGATCACGT
GATTCATACCAAAACAAAAAGCCAACTTCAGGATGGTGTATGGGGAAACT
TCACACCAGCAGGTCAACTAATAAAGCAAGCTTTAGGAAAGAAACAAAAA
GAAAATAGAATGAATGACCCAGCACCAGTGATATATGGTCTTGAATTTCA
AGCTCGTTCGTTATGCCCTCAATTTGGCGAAACCGAAGCAATACGGTTTT
TAGTTGGTACCCAATCATTACGTAATGATAACCAAGTCCATTTGATTGAT
TTTGAAGACGAAAGTAACCTAGTCACAAAGCATGTTTTTTCGCACACGCC
TGGTGAAATATGGAATATAGCATCGAATCCTTCAGATAAGAATATATTAG
CCACGTGTTATAGTAAGATTATAGATGGTAAAACGAAACGTTTTGCAGCA
ATGTGGAGGATTCCACCCTTAGATGAGACAGCACCTCCTGTTTATGAGTT
AACACCTGGTGATAATAACGGTAAATGCGTTTCGTTACAGCATGTATGTG
AGTTGGATGCAGGGCATGGTGATGTCAAGAAAGTCATGTGGAACCCATCC
AGTGATAACGACAAGCTATTAACCATCTCTGAAAGACATATTGATTTATG
GCAAACTTCAAATACGGGTGCTGATCATGTTGATACTATAACCTTAGAAG
GAAAAGCACAATTACAATACAGTGTCGGTAGATTCAATCCACACCATGGT
GGTTCGCAAATTGCCACCGGTATTGACTGTCACATTAAAGGATATGATTT
GAGGAGCATGTCATCTTCATTTTCTATAGAGAATGCTCATTCACAATTAG
TTCGTGACTTAGATATGAATCCGAACAAACAATACTATCTAGCTAGTTGT
TCGGATGATTGTAAAGTCAAATTTTGGGATATTCGGAACACGAAAGAATG
CCTAATGACGCGTTCAGATCACTCACATTGGGTATGGAGTATCAGATATA
ATAATTTTCATGATCAATTGATTTTGACGTCGAGTAGTGACAGTCGTGTC
ATTTTATCCAATATTGCATCCTTATCTTCGGAGCCTTTCGGTCACCTTGA
CGACGAAGATGAGGAGGAAGAAAAACCAAGAGAACCAATTCCTGATAGAT
TGATATCGACTTTCGAGGAACACGAAGACTCGGTGTATGCTGTGGAATGG
TCAAGTGTTGATCCATGGATCTTTGCTTCTCTTTCATATGATGGACGTTT
GGTCATCAATCGAGTTCCAAGAGTTGAGAAATATAAGATTCTTTTATAGG
ATTACTACGGTATTGGTATGGTGTATGGATCTGGCCAATTTTGGAATAAA
TGGCAACGTCCTGCTGAAAGGTTCATTGACAAAATCCCTGAATGGGATGA
AAAAAGGATGTCTGAACAGTTATTTCAAGAAGCATCTACAGCTTTTCAAG
AATGGTGTAAAAGAAATAGTGTTCCAGTTCTCTCGTTGGATCCTACAAGT
ACTGAAAAAGATGATCTCAAATCAATAGTACAATCCATTGGAAATGCACG
GTTTGTAGCCATCAGTGAAGGGTTTCATAATTGTAAGGAGATGATGAGTT
TACACCATAGGATCATTCGCCACCTGGTTGAAGAATGTGGATTCAACATT
GTGTTGAGTGAAAGTGGGTTCCCCGAGTCCCTTTATATCAATGATTATAT
TCGAGGGAAATCAATACCAGAGGAGATTGATGTATGGAAAAATGGTTTAA
ACAAAATGTACAGTGCCTGGAGAGAGGGACAAGCTCTGATTGAATACCTC
AAGAAGAATAATAAAGATTATGGTAATTCTTTAGAGTATTATGGTGTAGA
TATTGGAGGATTTTATCAAGACTGGGTCACTCCTTTCAATATAATTTTCA
AATACATCAAGACTGTTGATGAAGACTATTGTAAAGATCTAGAGTCAAAA
TTATTGCCATATCTCAACCAAATGTCCACAAATGCACGAAAAAACTATGC
TGAAAATTTTGATTTGCACCAAAAAGCTTTACTATCTGCTATATTGGACG
AAGCTGTAAGTTACTTTGGCTCCAAAGCTGATGAGTATGTATCCAGAAGC
AGTAAAGAAGATTATGAAAAGATTCGACAGTCATTGACTTCAATGCAGTT
GGCAGAAAACTATTATCGAAATTATGATACTGTTTCTAAGAAGTATGTAG
GTTTGAATGGAAGAGAGATTGCAATGGCCCAGAATTGCTTGTGGGTCTTA
AACAAAAGAAGTGATGCCAAAGTTGTTTGGATAGATCACGTGATTCATAC
CAAAACAAAAAGCCAACTTCAGGATGGTGTATGGGGAAACTTCACACCAG
CAGGTCAACTAATAAAGCAAGCTTTAGGAAAGAAACAAAAAGAAAATAGA
ATGAATGACCCAGCACCAGTGATATATGGTCTTGAATTTCAAGCTCGTTC
GTTATGCCCTCAATTTGGCGAAACCGAAGCAATACGGTTTTTAGTTGGTA
CCCAATCATTACGTAATGATAACCAAGTCCATTTGATTGATTTTGAAGAC
GAAAGTAACCTAGTCACAAAGCATGTTTTTTCGCACACGCCTGGTGAAAT
ATGGAATATAGCATCGAATCCTTCAGATAAGAATATATTAGCCACGTGTT
ATAGTAAGATTATAGATGGTAAAACGAAACGTTTTGCAGCAATGTGGAGG
ATTCCACCCTTAGATGAGACAGCACCTCCTGTTTATGAGTTAACACCTGG
TGATAATAACGGTAAATGCGTTTCGTTACAGCATGTATGTGAGTTGGATG
CAGGGCATGGTGATGTCAAGAAAGTCATGTGGAACCCATCCAGTGATAAC
GACAAGCTATTAACCATCTCTGAAAGACATATTGATTTATGGCAAACTTC
AAATACGGGTGCTGATCATGTTGATACTATAACCTTAGAAGGAAAAGCAC
AATTACAATACAGTGTCGGTAGATTCAATCCACACCATGGTGGTTCGCAA
ATTGCCACCGGTATTGACTGTCACATTAAAGGATATGATTTGAGGAGCAT
GTCATCTTCATTTTCTATAGAGAATGCTCATTCACAATTAGTTCGTGACT
TAGATATGAATCCGAACAAACAATACTATCTAGCTAGTTGTTCGGATGAT
TGTAAAGTCAAATTTTGGGATATTCGGAACACGAAAGAATGCCTAATGAC
GCGTTCAGATCACTCACATTGGGTATGGAGTATCAGATATAATAATTTTC
ATGATCAATTGATTTTGACGTCGAGTAGTGACAGTCGTGTCATTTTATCC
AATATTGCATCCTTATCTTCGGAGCCTTTCGGTCACCTTGACGACGAAGA
TGAGGAGGAAGAAAAACCAAGAGAACCAATTCCTGATAGATTGATATCGA
CTTTCGAGGAACACGAAGACTCGGTGTATGCTGTGGAATGGTCAAGTGTT
GATCCATGGATCTTTGCTTCTCTTTCATATGATGGACGTTTGGTCATCAA
TCGAGTTCCAAGAGTTGAGAAATATAAGATTCTTTTATAGGATTACTACG
GTATTGGTATGGTGTATGGATCTGGCCAATTTTGGAATAAATGGCAACGT
CCTGCTGAAAGGTTCATTGACAAAATCCCTGAATGGGATGAAAAAAGGAT
GTCTGAACAGTTATTTCAAGAAGCATCTACAGCTTTTCAAGAATGGTGTA
AAAGAAATAGTGTTCCAGTTCTCTCGTTGGATCCTACAAGTACTGAAAAA
GATGATCTCAAATCAATAGTACAATCCATTGGAAATGCACGGTTTGTAGC
CATCAGTGAAGGGTTTCATAATTGTAAGGAGATGATGAGTTTACACCATA
GGATCATTCGCCACCTGGTTGAAGAATGTGGATTCAACATTGTGTTGAGT
GAAAGTGGGTTCCCCGAGTCCCTTTATATCAATGATTATATTCGAGGGAA
ATCAATACCAGAGGAGATTGATGTATGGAAAAATGGTTTAAACAAAATGT
ACAGTGCCTGGAGAGAGGGACAAGCTCTGATTGAATACCTCAAGAAGAAT
AATAAAGATTATGGTAATTCTTTAGAGTATTATGGTGTAGATATTGGAGG
ATTTTATCAAGACTGGGTCACTCCTTTCAATATAATTTTCAAATACATCA
AGACTGTTGATGAAGACTATTGTAAAGATCTAGAGTCAAAATTATTGCCA
TATCTCAACCAAATGTCCACAAATGCACGAAAAAACTATGCTGAAAATTT
TGATTTGCACCAAAAAGCTTTACTATCTGCTATATTGGACGAAGCTGTAA
GTTACTTTGGCTCCAAAGCTGATGAGTATGTATCCAGAAGCAGTAAAGAA
GATTATGAAAAGATTCGACAGTCATTGACTTCAATGCAGTTGGCAGAAAA
CTATTATCGAAATTATGATACTGTTTCTAAGAAGTATGTAGGTTTGAATG
GAAGAGAGATTGCAATGGCCCAGAATTGCTTGTGGGTCTTAAACAAAAGA
AGTGATGCCAAAGTTGTTTGGATAGATCACGTGATTCATACCAAAACAAA
AAGCCAACTTCAGGATGGTGTATGGGGAAACTTCACACCAGCAGGTCAAC
TAATAAAGCAAGCTTTAGGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066790-exon-scaffold_46-1575043694:262989..264074 | TCONS_00066790-exon-scaffold_46-1575043694:262989..264074 | Clytia hemisphaerica | exon |
| TCONS_00066790-exon-scaffold_46-1575043694:262600..262707 | TCONS_00066790-exon-scaffold_46-1575043694:262600..262707 | Clytia hemisphaerica | exon |
| TCONS_00066790-exon-scaffold_46-1575043694:260326..261793 | TCONS_00066790-exon-scaffold_46-1575043694:260326..261793 | Clytia hemisphaerica | exon |
| TCONS_00066790-exon-scaffold_46-1510915933:262989..264074 | TCONS_00066790-exon-scaffold_46-1510915933:262989..264074 | Clytia hemisphaerica | exon |
| TCONS_00066790-exon-scaffold_46-1510915933:262600..262707 | TCONS_00066790-exon-scaffold_46-1510915933:262600..262707 | Clytia hemisphaerica | exon |
| TCONS_00066790-exon-scaffold_46-1510915933:260326..261793 | TCONS_00066790-exon-scaffold_46-1510915933:260326..261793 | Clytia hemisphaerica | exon |
| TCONS_00066790-exon-scaffold_46-1491911889:262989..264074 | TCONS_00066790-exon-scaffold_46-1491911889:262989..264074 | Clytia hemisphaerica | exon |
| TCONS_00066790-exon-scaffold_46-1491911889:262600..262707 | TCONS_00066790-exon-scaffold_46-1491911889:262600..262707 | Clytia hemisphaerica | exon |
| TCONS_00066790-exon-scaffold_46-1491911889:260326..261793 | TCONS_00066790-exon-scaffold_46-1491911889:260326..261793 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_46 | supercontig | scaffold_46:260326..264074 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0046677 | response to antibiotic |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0046677 |
response to antibiotic |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00066790 vs. Swiss-Prot (Human)
Match: TSSC1 (Protein TSSC1 OS=Homo sapiens GN=EIPR1 PE=1 SV=2) HSP 1 Score: 453.366 bits (1165), Expect = 1.002e-150 Identity = 221/390 (56.67%), Postives = 290/390 (74.36%), Query Frame = 1
Query: 1213 MNDPAPVIYGLEFQARSLCPQFGETEAIRFLVGTQSLRNDNQVHLIDFEDESNLVTKHVFSHTPGEIWNIASNPSDKNILATCYSKIIDGKTKRFAAMWRIPPLDETAPPVYELTPGDNNGKCVSLQHVCELD-AGHGDVKKVMWNPSSDNDKLLTISERHIDLW--QTSNTGADHVDTITLEGKAQLQYSVGRFNPHHGGSQIATGIDCHIKGYDLRSMSSSFSIENAHSQLVRDLDMNPNKQYYLASCSDDCKVKFWDIRNTKECLMTRSDHSHWVWSIRYNNFHDQLILTSSSDSRVILSNIASLSSEPFGHLXXXXX--------XXXKPREPIPDRLISTFEEHEDSVYAVEWSSVDPWIFASLSYDGRLVINRVPRVEKYKILL 2349
M D APVIYGLEFQAR+L PQ ET+AIRFLVGTQSL+ DNQ+H+IDF+DE+N++ K+V H GEIW+I+++P+D+ +L TCY++ D K AA+WR+P E+ +P D++ +L+ +C LD HG++ V+W P D K++++++ HI LW Q S++ A + +LEGK QL+++ GR++PHH +Q+AT D ++G+D RSMS + IENAH QLVRDLD NPNKQYYLASC DDCKVKFWD RN E + T +HSHWVW++RYN+ HDQL+LT SSDSRVILSN+ S+SSEPFGHL D+D+ EEK +EP+ D +I+T+EEHEDSVYAV+WSS DPW+FASLSYDGRLVINRVPR KY ILL
Sbjct: 1 MEDDAPVIYGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLTTCYNRTSDSKVLTCAAVWRMPKELESGS---HESPDDSSSTAQTLELLCHLDNTAHGNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTSGRWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDISDQEDHRSEEKSKEPLQDNVIATYEEHEDSVYAVDWSSADPWLFASLSYDGRLVINRVPRALKYHILL 387
The following BLAST results are available for this feature:
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