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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066814 ID=TCONS_00066814|Name=TCONS_00066814|organism=Clytia hemisphaerica|type=transcript|length=1056bp
agtcacgtgactctggtaggaaatccttccaaagatgagcttcacttttt
gataaaagccgcaaatctagcccttcgggctttacagatatctgtgactG
CAACAGCCAATCCACACAACTTGATACGCTATCTTCATCCTCTTTATCTC
GGCCAAACCAAAAAAAACCCATCGGTACCGGCAAATATTCCACGATTTCC
ATTACAACAACAAGAAGTTCAAAATGGTCGTACACAGGATCTTTCCAATC
TACAACTTCCATTAGTTCTAGCGAACGTAATCAATAGAATCAGACGCGgt
gattttgttaattttgactCTCTACGACCTCAGAACATTGGGCGATCCAC
TAATACCCATATTTCTTCGAACATCGATTGGGATAGTATTTCCTTGGCAA
GTAACAACGACACATCCTCTACCACTAAAGATAACTCAAAATACAAGGCC
AAAGTCTCCGACTTCCTTACCTGGCCTCTTACATGGAAACATGGTCCAGT
TTAACTCTCACTTGACAGAACAACTTTTACAGTACCAAAATTACATCACA
AACATGGCAAACCAGTACAATTTTTCCACTTGGGATTTTTTTCACGGCTT
TCAGCAATACTATAGGGAActgaaattttggcgaaaaaacctggaaaacc
aCGACGGTTGTTCTATCAAACACAAACCAGCATTtacaaaagtgattttt
ttcggACGCAAGCGAGACAGGGTTTGCCAGATTCGTCTGCGAAAGACTAA
ATAAGGAGATTTGTGCAGGCAGACTTTCATCATCAGAATCGTCACAACAA
GCTGGATATGCAGAGAACTATCAGCAATTAAATAGGTACTTcaaagtttt
ttctaatttgctGGCCGGAGGAGCAAATCATCCCAGACAATCAAAATACT
TAAACAAATTTTAACTGTAGGAAGTTCAAAAACCGATTTCCGTCAACTTT
CGCTCACAAGATTCTTTGATTATTAGTACCATTAAACATTTTGAGTCTGT
CCATATTCGGCTATTAGTGTAAAACCCAGTTTAAAAGCACCGATTGGAGA
GCCGGG Run BLAST on NCBI protein sequence of TCONS_00066814-protein >TCONS_00066814-protein ID=TCONS_00066814-protein|Name=TCONS_00066814-protein|organism=Clytia hemisphaerica|type=polypeptide|length=167bp
SHVTLVGNPSKDELHFLIKAANLALRALQISVTATANPHNLIRYLHPLYL
GQTKKNPSVPANIPRFPLQQQEVQNGRTQDLSNLQLPLVLANVINRIRRG
DFVNFDSLRPQNIGRSTNTHISSNIDWDSISLASNNDTSSTTKDNSKYKA
KVSDFLTWPLTWKHGPV Run BLAST on NCBI transcript from alignment at scaffold_46:15554..16609 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066814 ID=TCONS_00066814|Name=TCONS_00066814|organism=Clytia hemisphaerica|type=transcript|length=1056bp|location=Sequence derived from alignment at scaffold_46:15554..16609 (Clytia hemisphaerica)
CCCGGCTCTCCAATCGGTGCTTTTAAACTGGGTTTTACACTAATAGCCGA
ATATGGACAGACTCAAAATGTTTAATGGTACTAATAATCAAAGAATCTTG
TGAGCGAAAGTTGACGGAAATCGGTTTTTGAACTTCCTACAGTTAAAATT
TGTTTAAGTATTTTGATTGTCTGGGATGATTTGCTCCTCCGGCCagcaaa
ttagaaaaaactttgAAGTACCTATTTAATTGCTGATAGTTCTCTGCATA
TCCAGCTTGTTGTGACGATTCTGATGATGAAAGTCTGCCTGCACAAATCT
CCTTATTTAGTCTTTCGCAGACGAATCTGGCAAACCCTGTCTCGCTTGCG
TccgaaaaaaatcacttttgtaAATGCTGGTTTGTGTTTGATAGAACAAC
CGTCGtggttttccaggttttttcgccaaaatttcagTTCCCTATAGTAT
TGCTGAAAGCCGTGAAAAAAATCCCAAGTGGAAAAATTGTACTGGTTTGC
CATGTTTGTGATGTAATTTTGGTACTGTAAAAGTTGTTCTGTCAAGTGAG
AGTTAAACTGGACCATGTTTCCATGTAAGAGGCCAGGTAAGGAAGTCGGA
GACTTTGGCCTTGTATTTTGAGTTATCTTTAGTGGTAGAGGATGTGTCGT
TGTTACTTGCCAAGGAAATACTATCCCAATCGATGTTCGAAGAAATATGG
GTATTAGTGGATCGCCCAATGTTCTGAGGTCGTAGAGagtcaaaattaac
aaaatcacCGCGTCTGATTCTATTGATTACGTTCGCTAGAACTAATGGAA
GTTGTAGATTGGAAAGATCCTGTGTACGACCATTTTGAACTTCTTGTTGT
TGTAATGGAAATCGTGGAATATTTGCCGGTACCGATGGGTTTTTTTTGGT
TTGGCCGAGATAAAGAGGATGAAGATAGCGTATCAAGTTGTGTGGATTGG
CTGTTGCagtcacagatatctgtaaagcccgaagggctagatttgcggct
tttatcaaaaagtgaagctcatctttggaaggatttcctaccagagtcac
gtgact Coding sequence (CDS) from alignment at scaffold_46:15554..16609 >TCONS_00066814 ID=TCONS_00066814|Name=TCONS_00066814|organism=Clytia hemisphaerica|type=CDS|length=504bp|location=Sequence derived from alignment at scaffold_46:15554..16609 (Clytia hemisphaerica)
TTAAACTGGACCATGTTTCCATGTAAGAGGCCAGGTAAGGAAGTCGGAGA
CTTTGGCCTTGTATTTTGAGTTATCTTTAGTGGTAGAGGATGTGTCGTTG
TTACTTGCCAAGGAAATACTATCCCAATCGATGTTCGAAGAAATATGGGT
ATTAGTGGATCGCCCAATGTTCTGAGGTCGTAGAGagtcaaaattaacaa
aatcacCGCGTCTGATTCTATTGATTACGTTCGCTAGAACTAATGGAAGT
TGTAGATTGGAAAGATCCTGTGTACGACCATTTTGAACTTCTTGTTGTTG
TAATGGAAATCGTGGAATATTTGCCGGTACCGATGGGTTTTTTTTGGTTT
GGCCGAGATAAAGAGGATGAAGATAGCGTATCAAGTTGTGTGGATTGGCT
GTTGCagtcacagatatctgtaaagcccgaagggctagatttgcggcttt
tatcaaaaagtgaagctcatctttggaaggatttcctaccagagtcacgt
gact
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066814-exon-scaffold_46-1491911889:15554..16609 | TCONS_00066814-exon-scaffold_46-1491911889:15554..16609 | Clytia hemisphaerica | exon |
| TCONS_00066814-exon-scaffold_46-1510915933:15554..16609 | TCONS_00066814-exon-scaffold_46-1510915933:15554..16609 | Clytia hemisphaerica | exon |
| TCONS_00066814-exon-scaffold_46-1575043694:15554..16609 | TCONS_00066814-exon-scaffold_46-1575043694:15554..16609 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_46 | supercontig | scaffold_46:15554..16609 . |
Blast
The following BLAST results are available for this feature:
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