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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066833 ID=TCONS_00066833|Name=TCONS_00066833|organism=Clytia hemisphaerica|type=transcript|length=1018bp
AATAGCTAGTACTGCTATTGTCATTCCGTCAATATTGATCAAGCCAGTTA
AGTCTGTCAGGTTACTAAGCTGGATCAAAAGAGGAATCAAGGTACGAACT
AGACAGGAAACTAGTCCTAAGATGATCGCACAAATAATGACATAGCGAGG
CGAAGACTTTCGGACAAAAAGGAACTCGGCATCTGATGTCTCCATACTGG
AAAGACTTTCGTAATCTTCTTTGAATAGCTCTTGTTGTTCATTCAGTTTC
CGTGCGATGGAGTCTTTGGTCTTGTTGGAGGTGAAAGAATCATCGAAAGA
TTTTGAACCTTTGAACTTGTTGACATTAAAACCAAACTCATACTTCATGC
TGGCGAAATAAAACCATAATGAAGGTCCGACGAACGCTGTGAGTAACCAA
AGAGATAAAATCGGTGCGTACAAAACATGATATAACGGTACATCAGTGCC
GAAGTAGAAATGTAAAATCACTCCAGTGATTAATAGATCAGTGATGAAAG
TTAAGACTCCAACAATGACGAATTTCTGATTAACCTCTTTCTTTTGTTGA
TCGGTCATCTTGCGTTGCTCAGACGTTTTGCAGCATTTGGTGAACAAAAA
CACAACGAACACAACAATTGACGGACATATGAATAAGATAAGAACTAAGG
CTAATGCTTTCAGCAAACTTGTAATTTCGTTGTTTTCTGCTTTCCGAGTG
TAATATTGAAACGGAACATTCTCGTAATCAACCTCCACTTTTTCAACGGC
CACTTTAGGGCTGGGTGGACCATGAGGCATACCTGGGCGTATTTTGACGA
CATTTGGGTTGTCAAACGACATGCTGTTCGGTCTAAGGCTTGTGGTGGAG
GACGATGTACTCATATGGCGTTCAAAATCTTGACTGCCGCTGATTTTACG
ATggctgttgttgttgctgttagAGTAAGACCGTTGCTGTTGCTCGACAA
CTAAAGGAAGTGATTCTCCCTGGCTACGTGTACGACCTTTTAACCCCATT
TTCACGACGTCCTTCATT Run BLAST on NCBI protein sequence of TCONS_00066833-protein >TCONS_00066833-protein ID=TCONS_00066833-protein|Name=TCONS_00066833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
MKDVVKMGLKGRTRSQGESLPLVVEQQQRSYSNSNNNSHRKISGSQDFER
HMSTSSSTTSLRPNSMSFDNPNVVKIRPGMPHGPPSPKVAVEKVEVDYEN
VPFQYYTRKAENNEITSLLKALALVLILFICPSIVVFVVFLFTKCCKTSE
QRKMTDQQKKEVNQKFVIVGVLTFITDLLITGVILHFYFGTDVPLYHVLY
APILSLWLLTAFVGPSLWFYFASMKYEFGFNVNKFKGSKSFDDSFTSNKT
KDSIARKLNEQQELFKEDYESLSSMETSDAEFLFVRKSSPRYVIICAIIL
GLVSCLVRTLIPLLIQLSNLTDLTGLINIDGMTIAVLAI Run BLAST on NCBI transcript from alignment at scaffold_46:470472..471489 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066833 ID=TCONS_00066833|Name=TCONS_00066833|organism=Clytia hemisphaerica|type=transcript|length=1018bp|location=Sequence derived from alignment at scaffold_46:470472..471489 (Clytia hemisphaerica)
AATGAAGGACGTCGTGAAAATGGGGTTAAAAGGTCGTACACGTAGCCAGG
GAGAATCACTTCCTTTAGTTGTCGAGCAACAGCAACGGTCTTACTctaac
agcaacaacaacagccATCGTAAAATCAGCGGCAGTCAAGATTTTGAACG
CCATATGAGTACATCGTCCTCCACCACAAGCCTTAGACCGAACAGCATGT
CGTTTGACAACCCAAATGTCGTCAAAATACGCCCAGGTATGCCTCATGGT
CCACCCAGCCCTAAAGTGGCCGTTGAAAAAGTGGAGGTTGATTACGAGAA
TGTTCCGTTTCAATATTACACTCGGAAAGCAGAAAACAACGAAATTACAA
GTTTGCTGAAAGCATTAGCCTTAGTTCTTATCTTATTCATATGTCCGTCA
ATTGTTGTGTTCGTTGTGTTTTTGTTCACCAAATGCTGCAAAACGTCTGA
GCAACGCAAGATGACCGATCAACAAAAGAAAGAGGTTAATCAGAAATTCG
TCATTGTTGGAGTCTTAACTTTCATCACTGATCTATTAATCACTGGAGTG
ATTTTACATTTCTACTTCGGCACTGATGTACCGTTATATCATGTTTTGTA
CGCACCGATTTTATCTCTTTGGTTACTCACAGCGTTCGTCGGACCTTCAT
TATGGTTTTATTTCGCCAGCATGAAGTATGAGTTTGGTTTTAATGTCAAC
AAGTTCAAAGGTTCAAAATCTTTCGATGATTCTTTCACCTCCAACAAGAC
CAAAGACTCCATCGCACGGAAACTGAATGAACAACAAGAGCTATTCAAAG
AAGATTACGAAAGTCTTTCCAGTATGGAGACATCAGATGCCGAGTTCCTT
TTTGTCCGAAAGTCTTCGCCTCGCTATGTCATTATTTGTGCGATCATCTT
AGGACTAGTTTCCTGTCTAGTTCGTACCTTGATTCCTCTTTTGATCCAGC
TTAGTAACCTGACAGACTTAACTGGCTTGATCAATATTGACGGAATGACA
ATAGCAGTACTAGCTATT Coding sequence (CDS) from alignment at scaffold_46:470472..471489 >TCONS_00066833 ID=TCONS_00066833|Name=TCONS_00066833|organism=Clytia hemisphaerica|type=CDS|length=1017bp|location=Sequence derived from alignment at scaffold_46:470472..471489 (Clytia hemisphaerica)
ATGAAGGACGTCGTGAAAATGGGGTTAAAAGGTCGTACACGTAGCCAGGG
AGAATCACTTCCTTTAGTTGTCGAGCAACAGCAACGGTCTTACTctaaca
gcaacaacaacagccATCGTAAAATCAGCGGCAGTCAAGATTTTGAACGC
CATATGAGTACATCGTCCTCCACCACAAGCCTTAGACCGAACAGCATGTC
GTTTGACAACCCAAATGTCGTCAAAATACGCCCAGGTATGCCTCATGGTC
CACCCAGCCCTAAAGTGGCCGTTGAAAAAGTGGAGGTTGATTACGAGAAT
GTTCCGTTTCAATATTACACTCGGAAAGCAGAAAACAACGAAATTACAAG
TTTGCTGAAAGCATTAGCCTTAGTTCTTATCTTATTCATATGTCCGTCAA
TTGTTGTGTTCGTTGTGTTTTTGTTCACCAAATGCTGCAAAACGTCTGAG
CAACGCAAGATGACCGATCAACAAAAGAAAGAGGTTAATCAGAAATTCGT
CATTGTTGGAGTCTTAACTTTCATCACTGATCTATTAATCACTGGAGTGA
TTTTACATTTCTACTTCGGCACTGATGTACCGTTATATCATGTTTTGTAC
GCACCGATTTTATCTCTTTGGTTACTCACAGCGTTCGTCGGACCTTCATT
ATGGTTTTATTTCGCCAGCATGAAGTATGAGTTTGGTTTTAATGTCAACA
AGTTCAAAGGTTCAAAATCTTTCGATGATTCTTTCACCTCCAACAAGACC
AAAGACTCCATCGCACGGAAACTGAATGAACAACAAGAGCTATTCAAAGA
AGATTACGAAAGTCTTTCCAGTATGGAGACATCAGATGCCGAGTTCCTTT
TTGTCCGAAAGTCTTCGCCTCGCTATGTCATTATTTGTGCGATCATCTTA
GGACTAGTTTCCTGTCTAGTTCGTACCTTGATTCCTCTTTTGATCCAGCT
TAGTAACCTGACAGACTTAACTGGCTTGATCAATATTGACGGAATGACAA
TAGCAGTACTAGCTATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066833-exon-scaffold_46-1491911889:470472..471489 | TCONS_00066833-exon-scaffold_46-1491911889:470472..471489 | Clytia hemisphaerica | exon |
| TCONS_00066833-exon-scaffold_46-1510915933:470472..471489 | TCONS_00066833-exon-scaffold_46-1510915933:470472..471489 | Clytia hemisphaerica | exon |
| TCONS_00066833-exon-scaffold_46-1575043694:470472..471489 | TCONS_00066833-exon-scaffold_46-1575043694:470472..471489 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_46 | supercontig | scaffold_46:470472..471489 . |
Blast
The following BLAST results are available for this feature:
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