TCONS_00066846 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066846
Unique NameTCONS_00066846
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1028

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066846 ID=TCONS_00066846|Name=TCONS_00066846|organism=Clytia hemisphaerica|type=transcript|length=1028bp
GATGTCTAGATTTCTAAAGTAGAATATTCTTGCGAAGTGATGATAAAAGA
CCGTGAAAAATGCCTTGTCTTCTAAACAAATTTTTGCACGTTGATCGTTT
TTTACCTTTTATTTGATTTGCAGaaagtttttgacaaaaatgaagatcac
AGCAAAGATCCGATCTGAAAATTACCGTATCCCCGAAATAAATCACGCCT
TTAGAATAAGACAATATTACAGTGTGAAAAGAATCCGGCTGATATTTTTA
GATTTCCTTCTGAAAAGTGATTCTTGTAATAAGTAGTTTAAGCAGGTCAC
AAATAACAATGTTCGTATTTctttctaaaacaaaaatacattGTCTAGAC
TTATTGTTTTATcaaccaaaagttttttgataagaggctttaaaattttt
ttcctatAATAAAGCGGCCAGATATCAGACAGAGCAGTCGGAAATTTATA
TATTTCCACCAAAATAAAACTCAAATGCGAGTTTGATCTTTTGTTAATGC
GAAGAGATGGCTGCTGTACAAAGACGCTTTTTGCAGAGATGGGGAGCTTT
GTTATTTGGCAACGATAAAATTGCCATTATACACTTCTTGCAAGGACAAG
GACTTATCAGTGTTGTTAAAGCTTGCCCTGGTTGTCAATTACCAATGCGA
TTGGAACGAAACGACGGATGCTGTGATGGATATCGATGGGAGGTCGAGGA
AGACGGGCACAACCAGTTTGGGTTTTTGGGCTAGTAGATACAAGATTTAC
TCCAGCAAAAGGATATATGGAAATCGTCAATAGGAGAAACCGTCCGACTT
TGGTTGGTATCATTAATCGAGTTTTAAATCCTAACAGTGTTATTCATAGT
GATGAATGGCGCGCCTACAATCGTTTACAACAGTTTGTGCCAAACTGCAT
TCAGCACAACACCGTGAATCATACGTATCATTTTGTTGACCCTGTCACAG
GTGCTCACACACAGCATATTGAATCATTTTGGAATCGCTTCAAGCTTAAA
TTGAAAGCAATGAAAGGAATCGAACTAC
Run BLAST on NCBI

transcript from alignment at scaffold_461:5500..19735-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066846 ID=TCONS_00066846|Name=TCONS_00066846|organism=Clytia hemisphaerica|type=transcript|length=14236bp|location=Sequence derived from alignment at scaffold_461:5500..19735- (Clytia hemisphaerica)
GATGTCTAGATTTCTAAAGTAGAATATTCTTGCGAAGTGATGATAAAAGA
CCGTGAAAAATGCCTTGTCTTCTAAACAAATTTTTGCACGTTGATCGTTT
TTTACCTTTTATTTGATTTGCAGAAAGTTTTTGACAAAAATGAAGATCAC
AGCAAAGATCCGATCTGAAAATTACCGTATCCCCGAAATAAATCACGCCT
TTAGAATAAGACAATATTACAGTGTGAAAAGAATCCGGCTGATATTTTTA
GATTTCCTTCTGAAAAGTGATTCTTGTAATAAGTAGTTTAAGCAGGTCAC
AAATAACAATGTTCGTATTTCTTTCTAAAACAAAAATACATTGTCTAGAC
TTATTGTTTTATCAACCAAAAGTTTTTTGATAAGAGGCTTTAAAATTTTT
TTCCTATAATAAAGCGGCCAGATATCAGACAGAGCAGTCGGAAATTTATA
TATTTCCACCAAAATAAAACTCAAATGCGAGTTTGATCTTTTGTTAATGC
GAAGAGATGGCTGCTGTACAAAGACGCTTTTTGCAGAGATGGGGAGCTTT
GTTATTTGGCAACGATAAAATTGCCATTATACACTTCTTGCAAGGACAAG
GACTTATCAGTGTTGTTAAAGCTTGCCCTGGTTGTCAATTACCAATGCGA
TTGGAACGAAACGACGGATGCTGTGATGGATATCGATGGTGAGTCTTTCA
TTATTTTCTTTCACCTTTCGATACTTGGAAGGTTTTATGGGATGGCAGTA
ATTATAAATAAAGTGGGCGGAGTTATTAAAATTCAAAACCTCATACGCCC
TCACCTTAAGGTGGGTCTAAAATTTCAAATAAATTTCATAGGGGGGGGTC
ACTACTTAAGGGGGTCTTCTTTCCTAAGGGGGGACTATCTCTATCTCTAG
AAAATATGGTCTGCGAAGAAAACATTTTTAATAACCGATTTTCCAACGGT
GATTTGTATTAGCTTCTTATTAAGCTGATGGGGTCGGCGATAGTAATACA
TTCCTTCCGATTCGATTTGGTATAGGAGATCCATGTCACAAATCCCCGTC
TTTGTATTTTTCCTTTTTCGGAAAAGCACTTAGCATTTTAAAATGACGTC
ATCTTTCTTTCTTCATTGAAGGAAGAGTGAAAGATATAAGAAGAATAGCT
TCTTTTTCTTTGTTTTTAAGGGGAAGAAATTTGTGTTCCTCAAAAGACAA
TACCTTCCCTTTAACAAAACCTAGGAAAGTGACAATGCTATTGCCACTCA
TAAACTATGCACTATTTTCCATAACCTTTTTTGCAGGAGATGCAACAGGC
GCCGTTGTCCTACAACCTCGATGAGAATCAGGGAGGGTACGATATTCCAT
GATTGGACAAGAGTTTCGCTGCCAGATCTATTCTTTGTTATTTATCTGTG
GGCGAGTAAGATATCAATGACCAAAACTACAAATATAGTCGGTATCCTAA
AAGAGCATGTGATCAAAATGTTTCAGAAATTAAGAGGAATATGCACTCGG
GAGCTGCAAAGAAACCCAATTACTCTTGGTGGTGGTGGTATAAACTTTGT
TGTACAGATTGACGAAAGTCAATTCCAACATGCTCAAAGAGTATGTTGAT
TTTAGCTGGATTATAAATACAGTTGAATCCCGATAAGTAGTACCACGGAT
AAGTAGTACTCAGCTAAGTAGTACCACCTTTTTCTCGGCCCAGTTAAGCT
ACTACTTATCGGGATTCAACTGTACTATAAATACGTTTCCTAGATTTTAG
AAAGCTCTTGATGATCTCATTTACTATTTGCTAATTCAAATTTACTACCT
CAATGTTCTAAAAAGAGGCATAGAATGTGATGCATATTTTAAATCGCTCT
TTGATTTAGGAGAATGGTTAGTGAGTAACTTTAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNATATCTTTTTAACGAGCACAAAATCGCAACTTGATTCGAATTCTAT
CAAAAGTTACAGCCATTTTTTTCTCCAGCTGCAAATTATTTCGAGACAGA
CTTTAGATTGTTTAATGATGATTATACAATCGAACATCTTTTTATCGTTC
ATTTTTATAAAGACTATTAAAAATAAAAGCAATCAGGTTCTCAAAATTTT
CCTTGTCTCAATTTACATTCCCTTTGCTTGAATCTATTCATTTGGCGTTA
ACTTTAATCCAAAATTATTTCATAACAGATAGTCCATTCTACAAGGACCA
CGCTTTGCTTTAAAGGGTCCGGCGAATGTGAAGATCAGAGAAATTTAATA
CAAAATTAAACAAATCTGTTACAGTCACGGGTACAATGTATACCTGACCA
GGGGTACAATGTATACCTGGCCAGGGGTGTAAAGTATACTTGATCACGGG
TATAAAGTATACTAGATCACGGGTATAAAGTATATTTGATCACGGGTGTA
AAATATATTTGAAGCGGGTATAAACTATACTAGTGAATTCGATCTATTAA
AATAGTTTTGGGTACAATGTATACTTGTGACTTTATTCACAAGTACAGTT
TGTACCCGTGCCTCAAGCCAACCCGACCTGAGGAAAGGGGATAAGGGTCC
TGGCTTTTATTACGAAGTCAAAAATTAAGAATTTTGTTCTGGTTCACGAA
TGCAAATTATCATGTTTAGGGTCCTGGTCTCGAACTGAAATGATCATGGT
TGNATTACGAAGTCAAAAATTAAGAATTTTGTTCTGGTTCACGAATGCAA
ATTATCATGGTTTGAAACCCTGCCACACACTGAACTGATCATGGGTGGGG
TCTTTCCTAGTCACAAACTGCAATGATCATAGACAGAGTTCTGGCTATGA
AATGAACTGATCTTGGGTGAGGTCCTGGCTACAAAGTGAACTGATGATGG
GTGGCTTACTGACTTCAAAATTAATTGATCTTGGGTAGGGTTCTTGCTAC
GAGCTGAACTGATCTCAGTTGAGGTTCTGGCTACGAGCTGAACTGATCTT
GGGTAGCACCCTGGTTAGGAACTGAACTGATCATGGGTGGGGTTCTGGCT
ACGAGCTGAACTGATCCTGGGTGGGGTTCTGGCTACGAACTGAACTGATC
TTGCGTGGGGGTCTGGCTACGAGCTGAACTGATCCTGTGGGGGGTTCTGA
CTACGAGCTGAACTGATCCTGTGTGGGGTTCTGGCTACGAACTGAATTGA
TCTTGGGTGGGGTTTTGGCTACGAACTGAACTGATCCTGGGTGGGGTTCT
GGCTACGAACTGAACTGATCTTGCGTGGGGTTCTGGCTACGAGCTGAACT
GATCCTGTGTGGGGTTCTGACTACGAGCTGAACTGATCCTGTGTGGGGTT
CTGGCTACGAACTGAATTGATCTTGGGTGGGGTTTTGGCTACGAACTGAA
CTGATCTTGGGTGGGGTTCTGGCTACGAACTGAACTGATCATAGGTGGGG
TTCTGGCTACGAGCTGAACTGATCATGGGTGGGGTTCTGGCTACGAACTG
AACTGATCATGGGTGGGGTTCTTGCTGCGAATTGAACTGATCCTGTGTGG
GGTTGAAATGATCATGGGTGGGGTTCTGGCTACGAACTGAACTGGTCATA
TGTGGGGTTCTGGCTACGAACTGAATTGATCTTGGGTGGGGTTCTGGCTA
CGAGCTGAACTGATCCTGTGTGGGGTTCTGGCTACGAGCTGAACTGATCC
TGTGTGGGGTTCTGGCTACGAACTGAACTGATCTTGGGTGGGGTTGTGGC
TACGAACTGAACTGATCATGGGTGGGGTTCTGGCTACGAGCTGAACTGAT
TATAGTTGGGGTTCTGGCTACGAACTGAACTGATCATAGGCGGGGTTCTG
GCACGAGCTGAACTGATCTTGGGTAGCACCCTGGTTAGGAGCAGAACTGA
TCATGTGTGGAGTTGTGGCTACGAACTGAACTGATCATGGGTGGGGTTCT
GGCTACGAACTGAACTGATCATAGGTGGGGTTCTGGCTATGAGCTGAACT
GATCATGGGTGGAATCCTGGCCAGGAACTGAACAGTGAAAGTAGGAGGAG
CAGTTGTCGGTCTGTATTTTTATCATATTCAATTCCTGGCTACCAACTGA
ACAGTGAAAATATCAGTTCAGTTCGTGGCCATGCCTCACGCTAACCCGAC
CTGATCCGATAAAACCATTGTTTATCGATTTTGTATAAATATAATGGGCT
TTTCATCGCTGGGAAAATTTAGATATTTGATTAAAACTTAGTTATTTAGC
TTTTTTCTTTCAGTTTGTGTATGCTATGCGTTAAAAAAGTGGTGCATCGA
TATTTACAATTTAAAAAATATAATATAAACGAGACGTGTGAAAAAAAATT
TCATAAATAGTTTTTTTAGGTGTGAATAAGAAAGTGAATAATGCTGATAT
GCATGTTCTTTTACAGCAGGATAAAGTAGATATAAATATTTATAATACGC
CACCCGGTCGGGGGCATGACGCATGACCTTGACAACCGACGGGGTCGTGC
CGTTGGAGTTTGAAAAGTGGACTCTGTCAGATATAAATTTTTGGTAAATA
AATTTGAAATCCTGTCAGAGCGTCCTCAACTTCTCACAGACCTGGTAAGA
CTTTTTCAGTAATTGTGGGTAAAACAACGGAATAAATTAAACTTGATATT
CCCAAATGTTCTTTTATGGCTCCCGGTTTGAATTTCATATTGTTTTCAAG
TCAGATAATTTTGTGGGGATAGAAAAAAATAGCACAATATCTGTTCTGNA
ATTTTTTTCAAGTCAGATAATTTTGTGGGGATAGAAAAAAATAGCACAAT
ATCTGTTCTGTGGGAACAAATGTTGGACAAATGTTGGAGTGTAATTTCCA
CTGAGGACGATATTTTGGCCGATTTTTCCCGTGGGAGAAGCTCTTACCGG
GTCCGTGAGAAGAGAGTGTCTTTATGTTACAAATTTCAGTATAAAAATGG
TCACCTAAAGGTCACCCAGCAAACGATTAAGATGGATATTTTATTTACAA
CATGAAATCTTCAAAAAAAGCTGCAATGAAAATTCCACGTACGTAAGTTT
TAGAGGCAATGCTATCTAGCAAGGTAAAAAAATCGGGAAATTTCAACATT
TTCGCGAGCATAAACTCGAATTGCCTTGTAAAGAATTTTGTTGAACGACG
TGTCAAAGAGATTCATTATGAATGAATACTATTGGTCATTCGCTAGACTC
TGGTGGCGGATGAATAGTCACTGTGGTTGAATGTTGCTCCCCAGGATCAT
CATTGGCCACCGTATTTTCTGGCTGATGTGAATCGTTAGTTTCACTTCTG
TTAGTTACCGGTGGCTCATCAATGTCATCATTATTGCGTTCTGTTTCCTG
TATGAAATCATCGTCGTCCTCATCGTCGTTTTGATGAAAAATGAATTGCG
TAATTTCCGTTGTATTTTCGTCGACATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCGTCTATT
CGGGAGACAAGAGTAGTTGGTAAGGAGTTTGACGGGGTGAATTTGTCATC
CACTGTACTAATGAAAACAAATCGAAAAGATGAAATTTTCAAAATAATAA
GGTTCTATCTGGAAGAAAAATTGGGAGTATTGCTTGGAACAAAAAGGTTC
TATCTCCCGCTAAGCCAATCAAAATGCAGACACAAGTTTATGATAGAACC
TTTTTATTTTATAAGAAAAATTTAAACCAATCAGATCGCAACATTTTTCA
ATTTGCATAATAAAAACCACGAATACTCAAATAGAACCTATTTATTCCAA
GGTTGATAAATAAGCTATGAAAAACCCTGTATTAGAGACACAGACATGAA
TGGACAAAGCATCAAAAGTAAAATATCAAGAGATTGGAACTTAGTATAAA
ATAAACTTGCAATCTTTAACCAAAATCTTCTATTTCGCCCGACCATTTTT
CTTCTTTTGAATGTCTTTAAAAAACTATCGATCAAATTTTCTGAAATCAA
CTCATCCAATGTTTCAACAAACTTTCAATAAATATTTTTCCTTCAGGCGA
AAAGTGAAAAGTGTATTCAAAAATGTAAGAATACGAAATTGTAACTAACG
TTGAATGATGTTTGACAGAAAGTTTCAAAATTTTAGTCCCAAATATTTGC
TATTCCCTAGAGTTTTCTGAGGTACCTCCCTGATTGTGTTACCATAACTA
CAGACTAAACATGCCAGAAATATTAAATAATCATGAAATAGAGGCTGTGT
GAAAAATATGTCATGCAGACTATTGCATAATCAAAATGTCAAAATATATT
GAAAAATATTAAAATTCATACCGTTTTTTTTGCTCAAGATATTTAAATTT
AGATTTCTTTCTTAAGACATATGGTATTGAATATGAAAAGAAAATTCCAT
CGGAATATAGTTAGTTATGTTGTAGCAATGCATTGTTTTGTAATTTATAG
GTAACCTACCAAGTGACAAAAACGTCAAAACGACGTCCAACCAACATCCA
TAATTTAACGTTGAAATAACACTGGAGAAGAGCATTTTATCCTGATCTGA
ATCACAGACCTCTACAGATACATTTCCTATATTCATGATATTTATGACGT
AATGTTTTAACTTTTGTCTAGTTTAAATTTGCCACAACTGGCTAAAACCG
CGGCCTTTCCGTAGAAAACATTACGTCGTGAATATCATGAATAAGAAATT
CGCTTAAGGACTAACAGAAGCATAATTTTAACCACACTCTGATACGTAAA
AAATATTGAAAATAAATTTGAAAACTCTTTAGAAAATTATAATTTATAAG
ACGATAATATGCTTAAGATCAGTCTGATAGTTCGATCCTATAACATTTTT
TCGACCGTAGCCGCCAATTGCCGCGCAGACATTTTTTGTCCGTTTTACCA
CCCTAAATCCGTCCCAGTCGTTTTTTTGCACCTATAGACAATAGAAAAGG
GTGCAAAAAAAGGATTGGATCGAGTTTATGGGGATAATTGAATAATAAAG
TGACACACGCCTGACTACGGTCGAAAAGGTGCATCAGGATAGCATCCATA
GAGTTATATTTGGCTAAATACGAGCTCAATAGATCGTACCCTGTTGTCCA
AAGGGTAAATACGGGGGAGCTGAAGCAAAACTGGGTTCAGGGTTCATTTT
TATAAATAATTAAAATAATCATTTTCATCATACTTTTACATAATTTTATA
AAATTAGATTTCTTTTTTAGACATATATAAATAGACTACAAAACTCTGTT
TAGTACAGTAAACCAACATATAATTTCTCTTAAATACAAATTAATTTTTA
ACTCCATCTTCAAAATATAAATTTATACAGTTCATATTTTTTTGTCACAG
AATAATTCAAATTTTGAAATCTATCTACAACTTCTTGCAAATAAAACACT
TTAAGTTATCAGCTGGAAAATTTAATTAGCCTGTAATGACTTTTCCCGAT
AAATGTTCATTATATAGGGCAGGCTTTTTTCAAACTGAAGTCAGCGCCCT
CGACAGCTCCACTATGGTAAGCTTCGATTAAAAGTTCCAACGAATTGAAT
TGTGGGCCATGTTCGATACCGTANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAGAACCCCACACAGGATCAGTTCAGCTCGTAGCCAGAACCCCACCCA
AGATCAGTTCAGTTCGTAGCCACAACCCCACCCATGATCAGTTCAGTACG
TAGCCTGGACCCCACACAAGATCAGTTCAGCTCGTAGCCAGAACCCACCC
ATGATCAGTTCATTTCGTGGCCAGAACCCCTCACAGGATCAGTTCAGCTC
GTAGCCAGAAACCCACCCATGATCAGTTCATTTCGTGGCCAGAACCCCTC
ACAGGGTCAGTTCAGCTCGTAGCCAGAAACCCACCCATGATCAGTTCAGT
TCGTAGCTAGAACCCCACACAGGATCAAGTCAGCTCGTAGCCAGAACCCC
ACCCAAGACCAGTTCAGTTCGCAGCCACAGCTCCACCCATGATCAGTTCA
GTACGAAGCCTGAACCCCACACAGGATCAGTTCAGCTCGTAGCCAGAACC
CCACCCATGATCAGTTCATTTCGTAGTCAGAACCCCACACAGGATCAGTT
CATTTCGTAGCCAGAACCCCTCACAGGATCAGTTCAGTTCGTAGCCAGAA
CCCCATCCAAGNTCAGTTCATTTCGTAGCCAGAACCCCTCACAGGATCAG
TTCAGTTCGTAGCCAGAACCCCACCCATGATCAGTTCAGTTCGTAGCCAG
AACCCCACCTAAGATCAGTTCAGTTCGTGGCCAAAAACCCACCCATGATC
AGTTCAGTTCGTAGCCAGAACCCCACCCATGATCAGTTTAGTTCGTAGCC
AGAACCCCACACAGGATCAGTTCAGTTCGTAGCCAGAACCCCACACAGGA
TCAGTTCAGCTCGTAGCCAGAACCCCACCCAAGATCAGTTCAGTTCGTAG
CCAGAACCCCACACAGGATCAGTTCAGCTCGTAGCCAGAACCCCACCCGA
GATCAGTTCAGTTCGTAGCCACAACCCCACCTATGATCAGTTCAGTACGT
AGCCTGAACCGCACACAAGATCAATTCAGCTCTTAGCCAGAACCCCACAC
AGGATCAGTTCAGTTCGTAGCCAGAACCCCAACCTAGATCAAGTCAGACC
GTATAGGACCCCACCCATGATTAGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATCAGGTCGGGTT
AGCGTGAGGCATGGCCACGAACTGAACTGATATTTTCACTGTTCAGTTGG
TAGCCAGGAATCGAATATGATAAAAATACAGACCGAGAACTGCTCCTCCT
ACTTTCACTGTTCAGTTCCTGGCCAGGATTCCACCCATGATCAGTTTAGT
TCGTAGCCAGAACCCCACCCATGATCAGTTTAGTTCGTAGCCAGAACCCC
ACCCATGATCAGTTTAGTTCGTAGCCAGAACCCCACCCATGATCAGTTTA
GTTCGTAGCCAGAACCCCACCCATGATCAGTTTAGTTCGTAGCCAGAACC
CCACCCATGATCAGTTTAGTTCGTAGCCAGAACCCCACCCATGATCAGTT
TAGTTCGTAGCCAGAACCCCACCCATGATCAGTTCAGTTCGTAGCCAGAA
CCCCACACAGGATCAGTTCAGTTCGTAGCCAGAACACTATCCAAGATTAG
TTCGGTTCGTAGCCAGAACCCCACCCATGATCAGTTCAGTTCGTAGCCAG
AACCCCACCCATGATCAGTTCATTTCGTAGCCAGAACCCCACACAGGATC
AGTTCAGTTCGTAGCCAGAACCCCAACCTAGATCAAGTCAGACCGTACAG
GACCCCACCCATGATTAGTTCAGTTCGTAGTCAGGACTGGAATGAAAGAA
ATTTTACAGGCATGGAGGCGCGAAATGGTAAAAGAATTGGCGTGATCGTG
AAATGGAATTTTTCAAGCGTGACGGCGTGAAATCTGAAAGAAAATTGGCG
TTATGGCGCGAATTTTAGGTCCGCTGGGAGGGGGGGCTCTCATTTTGATG
TCTAGATTTCTAAAGTAGAATATTCTTGCGAAGTGATAAAAAAAGACCGT
GAAAAATGCCTTGTCTTTTAAACAAATTTTTGCACGTTGATCGTTATTTA
CCTTTTATTTGATTTGAAGAAAGTCTTTGACAAAAATGAAGACCCATCAC
AGCAAAGATCCGATCTGAAAATTACCGTATCCCCGAAAAAAATCACGCCT
TTAGAATAAGACAATATTACAGTATGAAAAGAATCCGGCTGATTATCGGG
GCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT
ACAGGGAGGTCGAGGAAGACGGGCACAACCAGTTTGGGTTTTTGGGCTAG
TAGATACAAGATTTACTCCAGCAAAAGGATATATGGAAATCGTCAATAGG
AGAAACCGTCCGACTTTGGTTGGTATCATTAATCGAGTTTTAAATCCTAA
CAGTGTTATTCATAGTGATGAATGGCGCGCCTACAATCGTTTACAACAGT
TTGTGCCAAACTGCATTCAGCACAACACCGTGAATCATACGTATCATTTT
GTTGACCCTGTCACAGGTGCTCACACACAGGTAAGTCTAATAGCTCTAAA
GAGGGTGTATATATCTACTTTCTTTTCGTTTTCCTGTTATAACTTGCTTA
TCCAATTATATTTTCAATGGTCATTATTTGTAAAATTATTTCAATGTACA
ATATTACGATCTGCTTCCGAAAGGAAAGGTCTTTTAGTTTTCGAAGACAT
ATTTCTCTGTAACTTACCAATACTAACAAGGTTTCCTAGTTCTTTTCTTG
CTCTGCTAGAGGCCCCCAGCGGTTTGCGTGATGGCGTGATTGGGGATTTT
TTCTTACGTGATAGCGTGATTAGAGATTTTTGTCGGCGTGATCAAGATTT
TGGCGTGATGCGTGATTTGGGCTATTTTTTGCGTGATGACAAAACTCCAG
CGATTTTCGTGATGCGTGATAGAGAAAAAATGTTGCTTGATGGCGTGATA
AGGGGTGCCGCAGGGGGGGGCTCCTCCTACAAAATATAACTTATGCAATA
ATGTTTCTTTTTCTTTCATTAGCATATTGAATCATTTTGGAATCGCTTCA
AGCTTAAATTGAAAGCAATGAAAGGAATCGAACTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041806XLOC_041806Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066846-exon-scaffold_461-1575043694:19048..19735TCONS_00066846-exon-scaffold_461-1575043694:19048..19735Clytia hemisphaericaexon
TCONS_00066846-exon-scaffold_461-1575043694:6056..6331TCONS_00066846-exon-scaffold_461-1575043694:6056..6331Clytia hemisphaericaexon
TCONS_00066846-exon-scaffold_461-1575043694:5500..5563TCONS_00066846-exon-scaffold_461-1575043694:5500..5563Clytia hemisphaericaexon
TCONS_00066846-exon-scaffold_461-1510915933:19048..19735TCONS_00066846-exon-scaffold_461-1510915933:19048..19735Clytia hemisphaericaexon
TCONS_00066846-exon-scaffold_461-1510915933:6056..6331TCONS_00066846-exon-scaffold_461-1510915933:6056..6331Clytia hemisphaericaexon
TCONS_00066846-exon-scaffold_461-1510915933:5500..5563TCONS_00066846-exon-scaffold_461-1510915933:5500..5563Clytia hemisphaericaexon
TCONS_00066846-exon-scaffold_461-1491911889:19048..19735TCONS_00066846-exon-scaffold_461-1491911889:19048..19735Clytia hemisphaericaexon
TCONS_00066846-exon-scaffold_461-1491911889:6056..6331TCONS_00066846-exon-scaffold_461-1491911889:6056..6331Clytia hemisphaericaexon
TCONS_00066846-exon-scaffold_461-1491911889:5500..5563TCONS_00066846-exon-scaffold_461-1491911889:5500..5563Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_461supercontigscaffold_461:5500..19735 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23645	0.0679911	0	0.0625343	0.257455	0.365512	0.649682	0.360713	0.665752	0.181716	0	0.139748	0.0764453	0.181978	0.0785712	0	0	0	0.162712	0.339207	0	0.1765	0.0153432	0.226991	0.1435	0.00682985	0	0.27212	0.0403756	0.0450183
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066846 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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