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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066848 ID=TCONS_00066848|Name=TCONS_00066848|organism=Clytia hemisphaerica|type=transcript|length=1871bp
GATGTCTAGATTTCTAAAGTAGAATATTCTTGCGAAGTGATGATAAAAGA
CCGTGAAAAATGCCTTGTCTTCTAAACAAATTTTTGCACGTTGATCGTTT
TTTACCTTTTATTTGATTTGCAGaaagtttttgacaaaaatgaagatcac
AGCAAAGATCCGATCTGAAAATTACCGTATCCCCGAAATAAATCACGCCT
TTAGAATAAGACAATATTACAGTGTGAAAAGAATCCGGCTGATATTTTTA
GATTTCCTTCTGAAAAGTGATTCTTGTAATAAGTAGTTTAAGCAGGTCAC
AAATAACAATGTTCGTATTTctttctaaaacaaaaatacattGTCTAGAC
TTATTGTTTTATcaaccaaaagttttttgataagaggctttaaaattttt
ttcctatAATAAAGCGGCCAGATATCAGACAGAGCAGTCGGAAATTTATA
TATTTCCACCAAAATAAAACTCAAATGCGAGTTTGATCTTTTGTTAATGC
GAAGAGATGGCTGCTGTACAAAGACGCTTTTTGCAGAGATGGGGAGCTTT
GTTATTTGGCAACGATAAAATTGCCATTATACACTTCTTGCAAGGACAAG
GACTTATCAGTGTTGTTAAAGCTTGCCCTGGTTGTCAATTACCAATGCGA
TTGGAACGAAACGACGGATGCTGTGATGGATATCGATGGTGAGtctttca
ttattttctttcaCCTTTCGATACTTGGAAGGTTTTATGGGATGGCAGTA
ATTATAAATAAAGTGGGCGGagttattaaaattcaaaacctcATACGCCC
TCACCTTAAGGTGGgtctaaaatttcaaataaatttcatagGGGGGGGTC
ACTACTTAAGGGGGTCTTCTTTCCTAAGGGGGGACTATCTCTATCTCTAG
AAAATATGGTCTGcgaagaaaacatttttaataacCGATTTTCCAACGGT
GATTTGTATTAGCTTCTTATTAAGCTGATGGGGTCGGCGATAGTAATACA
TTCCTTCCGATTCGATTTGGTATAGGAGATCCATGTCACAAATCCCCGTC
tttgtatttttcctttttcggaAAAGCACTTAGCAttttaaaatgacgtc
atctttcTTTCTTCATTGAAGGAAGAGTGAAAGATATAAGAAGAAtagct
tctttttctttgtttttaagggGAAGAAATTTGTGTTCCTCAAAAGACAA
TACCTTCCCTTTAACAAAACCTAGGAAAGTGACAATGCTATTGCCACTCA
TAAACTATGCACTATTTTCCATAACCTTTTTTGCAGGAGATGCAACAGGC
GCCGTTGTCCTACAACCTCGATGAGAATCAGGGAGGGTACGATATTCCAT
GATTGGACAAGAGTTTCGCTGCCAGATCTATTCTTTGTTATTTATCTGTG
GGCGAGTAAGATATCAATGACCAAAACTACAAATATAGTCGGTATCCTAA
AAGAGCATGTGATCAAAATGTTTCAGAAATTAAGAGGAATATGCACTCGG
GAGCTGCAAAGAAACCCAATTACTCTTGGTGGTGGTGGTATAAACTTTGT
TGTACAGATTGACGAAAGTCAATTCCAACATGCTCAAAGAGTATGTTGAT
TTTAGCTGGATTATAAATACAGTTGAATCCCGATAAGTAGTACCACGGAT
AAGTAGTACTCAGCTAAGTAGTACCACCTTTTTCTCGGCCCAGTTAAGCT
ACTACTTATCGGGATTCAACTGTACTATAAATAcgtttcctagattttag
aaagCTCTTGATGATCTCATTTACTATTTGCTAATTCAAATTTACTACCT
CAATGTTCTAAAAAGAGGCATAGAATGTGATGCATATTTTAAATCGCTCT
TTGATTTAGGAGAATGGTTAG Run BLAST on NCBI transcript from alignment at scaffold_461:17865..19735- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066848 ID=TCONS_00066848|Name=TCONS_00066848|organism=Clytia hemisphaerica|type=transcript|length=1871bp|location=Sequence derived from alignment at scaffold_461:17865..19735- (Clytia hemisphaerica)
GATGTCTAGATTTCTAAAGTAGAATATTCTTGCGAAGTGATGATAAAAGA
CCGTGAAAAATGCCTTGTCTTCTAAACAAATTTTTGCACGTTGATCGTTT
TTTACCTTTTATTTGATTTGCAGAAAGTTTTTGACAAAAATGAAGATCAC
AGCAAAGATCCGATCTGAAAATTACCGTATCCCCGAAATAAATCACGCCT
TTAGAATAAGACAATATTACAGTGTGAAAAGAATCCGGCTGATATTTTTA
GATTTCCTTCTGAAAAGTGATTCTTGTAATAAGTAGTTTAAGCAGGTCAC
AAATAACAATGTTCGTATTTCTTTCTAAAACAAAAATACATTGTCTAGAC
TTATTGTTTTATCAACCAAAAGTTTTTTGATAAGAGGCTTTAAAATTTTT
TTCCTATAATAAAGCGGCCAGATATCAGACAGAGCAGTCGGAAATTTATA
TATTTCCACCAAAATAAAACTCAAATGCGAGTTTGATCTTTTGTTAATGC
GAAGAGATGGCTGCTGTACAAAGACGCTTTTTGCAGAGATGGGGAGCTTT
GTTATTTGGCAACGATAAAATTGCCATTATACACTTCTTGCAAGGACAAG
GACTTATCAGTGTTGTTAAAGCTTGCCCTGGTTGTCAATTACCAATGCGA
TTGGAACGAAACGACGGATGCTGTGATGGATATCGATGGTGAGTCTTTCA
TTATTTTCTTTCACCTTTCGATACTTGGAAGGTTTTATGGGATGGCAGTA
ATTATAAATAAAGTGGGCGGAGTTATTAAAATTCAAAACCTCATACGCCC
TCACCTTAAGGTGGGTCTAAAATTTCAAATAAATTTCATAGGGGGGGGTC
ACTACTTAAGGGGGTCTTCTTTCCTAAGGGGGGACTATCTCTATCTCTAG
AAAATATGGTCTGCGAAGAAAACATTTTTAATAACCGATTTTCCAACGGT
GATTTGTATTAGCTTCTTATTAAGCTGATGGGGTCGGCGATAGTAATACA
TTCCTTCCGATTCGATTTGGTATAGGAGATCCATGTCACAAATCCCCGTC
TTTGTATTTTTCCTTTTTCGGAAAAGCACTTAGCATTTTAAAATGACGTC
ATCTTTCTTTCTTCATTGAAGGAAGAGTGAAAGATATAAGAAGAATAGCT
TCTTTTTCTTTGTTTTTAAGGGGAAGAAATTTGTGTTCCTCAAAAGACAA
TACCTTCCCTTTAACAAAACCTAGGAAAGTGACAATGCTATTGCCACTCA
TAAACTATGCACTATTTTCCATAACCTTTTTTGCAGGAGATGCAACAGGC
GCCGTTGTCCTACAACCTCGATGAGAATCAGGGAGGGTACGATATTCCAT
GATTGGACAAGAGTTTCGCTGCCAGATCTATTCTTTGTTATTTATCTGTG
GGCGAGTAAGATATCAATGACCAAAACTACAAATATAGTCGGTATCCTAA
AAGAGCATGTGATCAAAATGTTTCAGAAATTAAGAGGAATATGCACTCGG
GAGCTGCAAAGAAACCCAATTACTCTTGGTGGTGGTGGTATAAACTTTGT
TGTACAGATTGACGAAAGTCAATTCCAACATGCTCAAAGAGTATGTTGAT
TTTAGCTGGATTATAAATACAGTTGAATCCCGATAAGTAGTACCACGGAT
AAGTAGTACTCAGCTAAGTAGTACCACCTTTTTCTCGGCCCAGTTAAGCT
ACTACTTATCGGGATTCAACTGTACTATAAATACGTTTCCTAGATTTTAG
AAAGCTCTTGATGATCTCATTTACTATTTGCTAATTCAAATTTACTACCT
CAATGTTCTAAAAAGAGGCATAGAATGTGATGCATATTTTAAATCGCTCT
TTGATTTAGGAGAATGGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066848-exon-scaffold_461-1575043694:17865..19735 | TCONS_00066848-exon-scaffold_461-1575043694:17865..19735 | Clytia hemisphaerica | exon |
| TCONS_00066848-exon-scaffold_461-1510915933:17865..19735 | TCONS_00066848-exon-scaffold_461-1510915933:17865..19735 | Clytia hemisphaerica | exon |
| TCONS_00066848-exon-scaffold_461-1491911889:17865..19735 | TCONS_00066848-exon-scaffold_461-1491911889:17865..19735 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_461 | supercontig | scaffold_461:17865..19735 - |
Blast
The following BLAST results are available for this feature:
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