TCONS_00066895 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066895
Unique NameTCONS_00066895
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1532

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066895 ID=TCONS_00066895|Name=TCONS_00066895|organism=Clytia hemisphaerica|type=transcript|length=1532bp
GCAGAGTACCACGATTTTGTTGTTGTAATTGCAGTTTTTGCACGAGGAAT
CAGACCTATACCCATACAAAAAAATTGTTCGTTAGAGGGTGTACAAAAGT
TTAGGAAACGTTCGTATGCACATAGGGTTGAAGTGGTCGAAGGAGCTTTA
TATATTCCAGAGCTTAAAAGAGAAGCTTTTACTAAGCAAGCAGTGAATAG
ACTTCCACTATAGCAACCGTTTTTTTCACTATGTTTCTAGaatagaataa
aaaaatgtcGGATATCAGTGAAGATTATGATGATGAAGACGAAACGATAC
AACTTGGGCAATACGATGGAGGGCGTAACGATGGTGGAGAGCGTCATGGC
TTCGGGAAAGCTATTTTACCGAACGGTGATACTTACGAAGGAGAGTATGA
CCATGGAAAGAGACATGGTTATGGAACGTATAGATTCAAAAATGGTGCCA
AATATGTTGGAGATTATTTGAATGGTAAAAAACATGGGCAAGGAAATTTT
TGGTACCCAGACGGTTCACGTTATGAAGGTAGCTGGGTGGATGATCAACG
TAACGGTATCGGGACGTATTATTACGTCAACGGAGATTCGTATCAAGGTG
AATGGTACATGCACCGTAGACACGGGCAAGGAACGTATACGTACGCCGTT
ACGGGAAGTCAATACCGTGGGACGTGGGAtgaaggaaagaaaaaaggaTC
CGGAGAAATGATACACGCTAATCATAAATATTTAGGTTTCTTTGATGAAG
ACATGCCGAAAGGCCGTGGTAAATACAAATTCGATATTGGATGCGATTTA
CATGGTGAATATCAAATCGTTGAAGAGGTCGTTGAAGACTTTAGTAATGA
AGATGAAGAACCAACAGTTTATTTGAAGTCTGTGTGGGAAAGTAAAGGGA
AAATGACATCTTTGGGTACCAATTAACTGGCATTTTTGGAGATCAGTGTG
AAAAAACTAAAGAGATTTGACGTCGTTTAGTGCATATTGAACCAGTAAAT
ATCTATTTGTCCAACAAAAGTTTTCACAGGCGCTTTACAAGAACGAGAAA
GTAACGTTAATTGATCCGATTCTCCAATTAAAGGCAACTACTCGATTGAA
AATGTACGGAGATTTACGGATTGAGATGGATTGGAATTTCCAGgtgtatt
ttttataatttttgctgtaaataaatttatgataattatgtttataaaat
aatacaaaaaatgCATTATCTAATTTAAACACTCAACGATTATCCAGATG
AAAGCGGTCTGATAAAATTAAGCCTTGGTCGGCCAACCAAAACGAAACTT
ACACCCCCGCTTGATTGATACTTAAGCTATGTGGTTAAATTGAGTACGAG
TATGTATGCCCTCTTGGACGAATATAGGCGGATAACTTTTAGACTAGGAG
GAGAACTTATTAACAAATAATTGCATGTTATTATCGACATATCAACCTAG
CCGCTATTCTTTAAACAAGAGAAGGATGTTTTTATAAGTATTTGTATGGT
TGACAAGACGAGATTATTTTGTACAAAAGAAG
Run BLAST on NCBI

protein sequence of TCONS_00066895-protein

>TCONS_00066895-protein ID=TCONS_00066895-protein|Name=TCONS_00066895-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
MSDISEDYDDEDETIQLGQYDGGRNDGGERHGFGKAILPNGDTYEGEYDH
GKRHGYGTYRFKNGAKYVGDYLNGKKHGQGNFWYPDGSRYEGSWVDDQRN
GIGTYYYVNGDSYQGEWYMHRRHGQGTYTYAVTGSQYRGTWDEGKKKGSG
EMIHANHKYLGFFDEDMPKGRGKYKFDIGCDLHGEYQIVEEVVEDFSNED
EEPTVYLKSVWESKGKMTSLGTN
Run BLAST on NCBI

transcript from alignment at scaffold_462:638387..644076+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066895 ID=TCONS_00066895|Name=TCONS_00066895|organism=Clytia hemisphaerica|type=transcript|length=5690bp|location=Sequence derived from alignment at scaffold_462:638387..644076+ (Clytia hemisphaerica)
GCAGAGTACCACGATTTTGTTGTTGTAATTGCAGTTTTTGCACGAGGAAT CAGACCTATACCCATACAAAAAAATTGTTCGTTAGAGGGTGTACAAAAGT TTAGGAAACGTTCGTATGCACATAGGGTTGAAGTGGTCGAAGGAGCTTTA TATATTCCAGAGCTTAAAAGAGAAGCTTTTACTAAGCAAGCAGTGAATAG ACTTCCACTATAGCAACCGTTTTTTTCACTATGTTTCTAGaatagaataa aaaaatgtcGGATATCAGTGAAGATTATGATGATGAAGACGAAACGATAC AACTTGGGGTAAGTACTGTCATCTGATACCAGTTTTTCAGAACTTCATTT CCCACGTGCTAGAATCACAACTCTCAAATTCTTCAGGTTTTACGAAATGG CAACTACAGCTTTTTAACTCATTTAACTGTGGCCaaggtattttagtgaa aaagccCGATGAGAGAGAAATATAATCTCTTGACTGACAGTCATTTTAAC TTGAAAATCTAGTAGTGAGCTTCCCGCTGAATGATCGATGATATATAATT TGAGCCTTATTTCTGCGCTCCCAATTTTATATTAGTCTAGTTCAGTGCGG GTCGAGTAGCTGATAACAGTTTATCATACTTTAGCTTCCTTCTGAAGTGT GTGATTAAAGGCATTAAATAAACCTAGAGTATCTCTCACACAAGATAACA GTCGATTTTCCCCCTTCATATGATTTACTACGTGTTAATCCTTGGTATCT ATTTTCATACCGTTATTgtgattttgtgaaatttgagACCTTCATATATT TGGTTGATTGACACTCTCGACTCCAGGCCTTATCtgacccccttacgcta ttgatgactCTGATTTAACGTTTTGACGGGAGATGTAAGAGCCTTAAACG ATTCCTCCAGTTTTACGGCACTGGACTCTTTACGTCGAAGAATCGTTTAA CGTCCCTGGCACGCGTGGGTTGGTTGATTGAAAGTCTGTCAATCatactg aaaaaataaaaatactgaACTATTGCTCGGTAATCAATCCAGGTTAACTT ATCCCAAGTGCAATACAGTTAAAGCTTtataattcaattttatttaaggG GAAAGGGATTTTAATCACGGGAGCTTCTCGAATAATAGAATGTGCAAAGG GTGTTAATGAGAGAAATTTGCCAGTGACTTTTCAATTATATCGAAAACAG GAATAACAaaaatgtcgaattagagagcatcaactgtaatAGTTTTTTGG CTAGTTTTAGAACAATCCTAAAGGTTGCATGAAAACATCTCTTTTTCGAT GGTCAAGGATCTCAAATTATTATTTACCGTTCAATAAGTCCAATGTCTTA GTCTAATGAAGATATTGTTCTGGTAGGGACTGAAATATTTGGATATATCA TGGAGGAAAATTAGATATATGATAATTTATTGTATAtcgtattttttcaa aattcgagCTAAATTTGACCCGTTTCTACATCCCtaaattgacatttttg taCTTAAAATAACCCGGTGGGACCCCAAACCCATTAGAAAATATGTTCAA AATTTCATCCTAAAGTgggaaattttctttgatttcatcccgatttttaa attgatatttttgtacCTAAAATAACCCGGTGGGACCCCAAACCCATTGG AAAATATGTTCAAAATTTCGTCCGAAGTGGGAAATTGCCTTTGATTTCAT CCCGATTTttggagcaatagaatttctagCCCCATAGGGATATCGATAGG AATCTTTATCCCCATGTTGGAAAAAGATTCCACCGAGCTggtgagacagg gatgtcttAAATAATAAGGAAAAGGCAAATTtactcaggtgagttaaggc aagtttcaaacatattttgcgtgacgcgcaccgcttcccattgttcctta actttcgtatatagctcaaaagaagcgtattaaggaGAGGATTTCGGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNcgtcgaaaaaacacgtcaaaaagacaagttaaat gacgtcatatttaaaaacagcgataacttcgattACATTACTACAATTTA CactaaattttgactggagaggTTGATTGTTAATTCTGAaatattgcatg aaaaaaatttgaaaatttttgatgacgtcatcattatttgacgtatttta atttttaccgacagtaaatgacgtcatctaaagatttagaaaatttctct acaaatattttagaatcgttaatctacgtctccagtcaaaatttggtgtt atttgtagcaatgtaatcgaagttatcgctgtttttaaatatgacgtcat ttaacttgtctttttgacgtgttttttcgacgtatttcttaacgtaaaaa tcagtttttggccgatatcttgagattggcttaatttaaattttcggctc agcactttccgaaatcctctccttaatacgcttcttttgagctatatacg aaagttaaggaacaatgggaagcggtgcgcgtcacgcaaaatatgtttgg gacttgccttaactcacctgagtaGGTTCCCATACACTTTATAAAAGTGA TATTggttataaatttttttacatttctaAACGCCCCtccaaaaaaacat gaaaaaaccaATAAAACTCAATAAAGGCCCGGGGCGtatattcgaagtaa tacgataAGTGAACGATTATCCAGTTAGTCCAGTTAATCGCGCAATTCAT TCTATTGCATTATTTCATGACGCACAtcaataaattgttttttagCAATA CGATGGAGGGCGTAACGATGGTGGAGAGCGTCATGGCTTCGGGAAAGCTA TTTTACCGAACGGTGATACTTACGAAGGAGAGTATGACCATGGAAAGAGA CATGGTTATGGAACGTATAGATTCAAAAATGGTGCCAAATATGTTGGAGA TTATTTGAATGGTAAAAAACATGGGCAAGGTAAGAGACTgctcatctaac gtttccagaccataaaaaaaacgacaaataactattaaaaagcgacaaac agaacgacaaaccctaaccTTAGCTaccaaagaacgacatatttcgccgt cccAAACCCTTACCTTGGCAACTACCACCCCTACATATTCATTGCTTTTT GTACTTTACGCTATTTAAGAACTGGCAGTTTGAAGAACGATAAATAACGC ATgcgtataagtctctatttgggtgagctggaaataTTTGATGAGCTAAC TCTAACAATGACTTTTCAATAGAAGTCTAATTGATATAATTGAGAGTGTG TATGGTTTCGATAGCCCTAAAGATAAACATCCATtgacggattcgtgctc cttatattACAATCACGGACAAAAGGTCgtagacttttcaaaatgcatga aaaatttcaaaacaagctCTGAAAACACATTTTACAAAGGCCAATGTTGT TTTATTGGATTTGGAGGGTTTGGGTGACAGACAATTCCAGAAGCCAAATC CACTCGATTTTGaaggaaatgaatttttgaaaagtctacagactttttgt ccatgattgtaactgcagttttgtagaggtctgtgattcagactaccttt tcggccctttttacgccggccctaatttaacgccggcccttattacgcta CAGCCTGATTTTAgacttacgccaattagggccgtaaataacgcaaaaaa ttgttagaatggctatttatacttcaatttacattaaaatatcatttttc agtagtaaactattaaaattccattgaaaattactgatttttgcaaagtt ttagatatggagtaaaacaatgaataattttttatcttcgaatcatacct aaaatcctttaaataaagaaaaatggtcaaaaattaacgccacttttaag taaaatttgctgaattttggccctttttacaccggtcCTTTTAACGCCAA GAGccaaaaaataacgccaataagggccggcgtaaaaaggaccgATAAGG TATTAAATTCTGAAAGTCAGGCAGAGGCACCTGAACCAAAAAGAGGGCTT TTGTAAGGACCTTGAAtctataataataatttttcgGTATTTCATTTCAT TACTTAGTAAGGTTGACCTTTATGATTTTTAAGTAGCTCTTTTTGTACAT TTCAGGAAATTTTTGGTACCCAGACGGTTCACGTTATGAAGGTAGCTGGG TGGATGATCAACGTAACGGTATCGGGACGTATTATTACGTCAACGGAGAT TCGTATCAAGGTGAATGGTACATGCACCGTAGACACGGGCAAGGAACGTA TACGTACGCCGTTACGGGAAGTCAATACCGTGGGACGTGGGAtgaaggaa agaaaaaaggaTCCGGAGAAATGATACACGCTAATCATAAATATTTAGGT TAGATTTTNGAAAGGATCAGGAGAAATGATACACGCTAATCATAAATATT TAGGTAAGATTTTACAGCTTTTTATGCAATTAGACTGAGCCTAGAAGGAC TACTTTCAGGACATTTCAGGTCTAAATTGGTTAATAAAAGGGAAGTAAAC TTGCacgatttttgcaaattttcagccaaatatctgaaaaattctgaaaa gccAATGTAATTCGCGAATGCTAATTCTCCTGAATCTAACCTTAGTCtta aaagttttctcaaaacaacTTGAAAAGTGAAGGATTTCTACTTGAGATGA ATCGATTATTATAATAACGAAATCATGACTTCTTGCTTTCTAGGTTTCTT TGATGAAGACATGCCGAAAGGCCGTGGTAAATACAAATTCGATATTGGAT GCGATTTACATGGTGAATATCAAATCGTTGAAGAGGTCGTTGAAGACTTT AGTAATGAAGATGAAGAACCAACAGTTTATTTGAAGTCTGTGTGGGAAAG TAAAGGGAAAATGACATCTTTGGGTACCAATTAACTGGCATTTTTGGAGA TCAGTGTGAAAAAACTAAAGAGATTTGACGTCGTTTAGTGCATATTGAAC CAGTAAATATCTATTTGTCCAACAAAAGTTTTCACAGGCGCTTTACAAGA ACGAGAAAGTAACGTTAATTGATCCGATTCTCCAATTAAAGGCAACTACT CGATTGAAAATGTACGGAGATTTACGGATTGAGATGGATTGGAATTTCCA Ggtgtattttttataatttttgctgtaaataaatttatgataattatgtt tataaaataatacaaaaaatgCATTATCTAATTTAAACACTCAACGATTA TCCAGATGAAAGCGGTCTGATAAAATTAAGCCTTGGTCGGCCAACCAAAA CGAAACTTACACCCCCGCTTGATTGATACTTAAGCTATGTGGTTAAATTG AGTACGAGTATGTATGCCCTCTTGGACGAATATAGGCGGATAACTTTTAG ACTAGGAGGAGAACTTATTAACAAATAATTGCATGTTATTATCGACATAT CAACCTAGCCGCTATTCTTTAAACAAGAGAAGGATGTTTTTATAAGTATT TGTATGGTTGACAAGACGAGATTATTTTGTACAAAAGAAG

Coding sequence (CDS) from alignment at scaffold_462:638387..644076+

>TCONS_00066895 ID=TCONS_00066895|Name=TCONS_00066895|organism=Clytia hemisphaerica|type=CDS|length=2688bp|location=Sequence derived from alignment at scaffold_462:638387..644076+ (Clytia hemisphaerica)
atgtcGGATATCAGTGAAGATTATGATGATGAAGACGAAACGATACAACT
TGGGCAATACGATGGAGGGCGTAACGATGGTGGAGAGCGTCATGGCTTCG
GGAAAGCTATTTTACCGAACGGTGATACTTACGAAGGAGAGTATGACCAT
GGAAAGAGACATGGTTATGGAACGTATAGATTCAAAAATGGTGCCAAATA
TGTTGGAGATTATTTGAATGGTAAAAAACATGGGCAAGGAAATTTTTGGT
ACCCAGACGGTTCACGTTATGAAGGTAGCTGGGTGGATGATCAACGTAAC
GGTATCGGGACGTATTATTACGTCAACGGAGATTCGTATCAAGGTGAATG
GTACATGCACCGTAGACACGGGCAAGGAACGTATACGTACGCCGTTACGG
GAAGTCAATACCGTGGGACGTGGGAtgaaggaaagaaaaaaggaTCCGGA
GAAATGATACACGCTAATCATAAATATTTAGGTTTCTTTGATGAAGACAT
GCCGAAAGGCCGTGGTAAATACAAATTCGATATTGGATGCGATTTACATG
GTGAATATCAAATCGTTGAAGAGGTCGTTGAAGACTTTAGTAATGAAGAT
GAAGAACCAACAGTTTATTTGAAGTCTGTGTGGGAAAGTAAAGGGAAAAT
GACATCTTTGGGTACCAATTAAatgtcGGATATCAGTGAAGATTATGATG
ATGAAGACGAAACGATACAACTTGGGCAATACGATGGAGGGCGTAACGAT
GGTGGAGAGCGTCATGGCTTCGGGAAAGCTATTTTACCGAACGGTGATAC
TTACGAAGGAGAGTATGACCATGGAAAGAGACATGGTTATGGAACGTATA
GATTCAAAAATGGTGCCAAATATGTTGGAGATTATTTGAATGGTAAAAAA
CATGGGCAAGGAAATTTTTGGTACCCAGACGGTTCACGTTATGAAGGTAG
CTGGGTGGATGATCAACGTAACGGTATCGGGACGTATTATTACGTCAACG
GAGATTCGTATCAAGGTGAATGGTACATGCACCGTAGACACGGGCAAGGA
ACGTATACGTACGCCGTTACGGGAAGTCAATACCGTGGGACGTGGGAtga
aggaaagaaaaaaggaTCCGGAGAAATGATACACGCTAATCATAAATATT
TAGGTTTCTTTGATGAAGACATGCCGAAAGGCCGTGGTAAATACAAATTC
GATATTGGATGCGATTTACATGGTGAATATCAAATCGTTGAAGAGGTCGT
TGAAGACTTTAGTAATGAAGATGAAGAACCAACAGTTTATTTGAAGTCTG
TGTGGGAAAGTAAAGGGAAAATGACATCTTTGGGTACCAATTAAatgtcG
GATATCAGTGAAGATTATGATGATGAAGACGAAACGATACAACTTGGGCA
ATACGATGGAGGGCGTAACGATGGTGGAGAGCGTCATGGCTTCGGGAAAG
CTATTTTACCGAACGGTGATACTTACGAAGGAGAGTATGACCATGGAAAG
AGACATGGTTATGGAACGTATAGATTCAAAAATGGTGCCAAATATGTTGG
AGATTATTTGAATGGTAAAAAACATGGGCAAGGAAATTTTTGGTACCCAG
ACGGTTCACGTTATGAAGGTAGCTGGGTGGATGATCAACGTAACGGTATC
GGGACGTATTATTACGTCAACGGAGATTCGTATCAAGGTGAATGGTACAT
GCACCGTAGACACGGGCAAGGAACGTATACGTACGCCGTTACGGGAAGTC
AATACCGTGGGACGTGGGAtgaaggaaagaaaaaaggaTCCGGAGAAATG
ATACACGCTAATCATAAATATTTAGGTTTCTTTGATGAAGACATGCCGAA
AGGCCGTGGTAAATACAAATTCGATATTGGATGCGATTTACATGGTGAAT
ATCAAATCGTTGAAGAGGTCGTTGAAGACTTTAGTAATGAAGATGAAGAA
CCAACAGTTTATTTGAAGTCTGTGTGGGAAAGTAAAGGGAAAATGACATC
TTTGGGTACCAATTAAatgtcGGATATCAGTGAAGATTATGATGATGAAG
ACGAAACGATACAACTTGGGCAATACGATGGAGGGCGTAACGATGGTGGA
GAGCGTCATGGCTTCGGGAAAGCTATTTTACCGAACGGTGATACTTACGA
AGGAGAGTATGACCATGGAAAGAGACATGGTTATGGAACGTATAGATTCA
AAAATGGTGCCAAATATGTTGGAGATTATTTGAATGGTAAAAAACATGGG
CAAGGAAATTTTTGGTACCCAGACGGTTCACGTTATGAAGGTAGCTGGGT
GGATGATCAACGTAACGGTATCGGGACGTATTATTACGTCAACGGAGATT
CGTATCAAGGTGAATGGTACATGCACCGTAGACACGGGCAAGGAACGTAT
ACGTACGCCGTTACGGGAAGTCAATACCGTGGGACGTGGGAtgaaggaaa
gaaaaaaggaTCCGGAGAAATGATACACGCTAATCATAAATATTTAGGTT
TCTTTGATGAAGACATGCCGAAAGGCCGTGGTAAATACAAATTCGATATT
GGATGCGATTTACATGGTGAATATCAAATCGTTGAAGAGGTCGTTGAAGA
CTTTAGTAATGAAGATGAAGAACCAACAGTTTATTTGAAGTCTGTGTGGG
AAAGTAAAGGGAAAATGACATCTTTGGGTACCAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041825XLOC_041825Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066895-exon-scaffold_462-1491911889:638387..638694TCONS_00066895-exon-scaffold_462-1491911889:638387..638694Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1510915933:638387..638694TCONS_00066895-exon-scaffold_462-1510915933:638387..638694Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1575043694:638387..638694TCONS_00066895-exon-scaffold_462-1575043694:638387..638694Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1491911889:641332..641515TCONS_00066895-exon-scaffold_462-1491911889:641332..641515Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1510915933:641332..641515TCONS_00066895-exon-scaffold_462-1510915933:641332..641515Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1575043694:641332..641515TCONS_00066895-exon-scaffold_462-1575043694:641332..641515Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1491911889:642692..642934TCONS_00066895-exon-scaffold_462-1491911889:642692..642934Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1510915933:642692..642934TCONS_00066895-exon-scaffold_462-1510915933:642692..642934Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1575043694:642692..642934TCONS_00066895-exon-scaffold_462-1575043694:642692..642934Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1491911889:643280..644076TCONS_00066895-exon-scaffold_462-1491911889:643280..644076Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1510915933:643280..644076TCONS_00066895-exon-scaffold_462-1510915933:643280..644076Clytia hemisphaericaexon
TCONS_00066895-exon-scaffold_462-1575043694:643280..644076TCONS_00066895-exon-scaffold_462-1575043694:643280..644076Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066895-proteinTCONS_00066895-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:638387..644076 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
75.0874 72.567 128.83 138.181 489.458 376.043 241.257 255.686 129.75 138.89 76.8311 123.658 6.41596 5.8319 8.81797 8.54824 6.12546 6.72795 11.4635 10.6896 13.0997 12.2541 17.1791 14.7535 11.6893 14.0041 53.7312 61.6133 4.48414 4.03233
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN
Blast
BLAST of TCONS_00066895 vs. Swiss-Prot (Human)
Match: RSPH1 (Radial spoke head 1 homolog OS=Homo sapiens GN=RSPH1 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.130e-72
Identity = 112/190 (58.95%), Postives = 145/190 (76.32%), Query Frame = 3
Query:  255 MSDISXXXXXXXXTIQLGQYDGGRNDGGERHGFGKAILPNGDTYEGEYDHGKRHGYGTYRFKNGAKYVGDYLNGKKHGQGNFWYPDGSRYEGSWVDDQRNGIGTYYYVNGDSYQGEWYMHRRHGQGTYTYAVTGSQYRGTWDEGKKKGSGEMIHANHKYLGFFDEDMPKGRGKYKFDIGCDLHGEYQIVE 824
            MSD+  +  +E+    +G+Y+GGRN+ GERHG G+A LPNGDTYEG Y+ GKRHG G Y+FKNGA+Y+G+Y+  KKHGQG F YPDGSRYEG W +D R+G G YYY+N D+Y GEW+ H+RHGQGTY YA TGS+Y GTW  G+++G+ E+IH NH+Y G F    P G GKY FD+GC+ HGEY++ +
Sbjct:    1 MSDLGSEELEEEGENDIGEYEGGRNEAGERHGRGRARLPNGDTYEGSYEFGKRHGQGIYKFKNGARYIGEYVRNKKHGQGTFIYPDGSRYEGEWANDLRHGHGVYYYINNDTYTGEWFAHQRHGQGTYLYAETGSKYVGTWVNGQQEGTAELIHLNHRYQGKFLNKNPVGPGKYVFDVGCEQHGEYRLTD 190          
The following BLAST results are available for this feature:
BLAST of TCONS_00066895 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RSPH15.130e-7258.95Radial spoke head 1 homolog OS=Homo sapiens GN=RSP... [more]
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