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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066896 ID=TCONS_00066896|Name=TCONS_00066896|organism=Clytia hemisphaerica|type=transcript|length=844bp
TTNGAAAGGATCAGGAGAAATGATACACGCTAATCATAAATATTTAGGTT
TCTTTGATGAAGACATGCCGAAAGGCCGTGGTAAATACAAATTCGATATT
GGATGCGATTTACATGGTGAATATCAAATCGTTGAAGAGGTCGTTGAAGA
CTTTAGTAATGAAGATGAAGAACCAACAGTTTATTTGAAGTCTGTGTGGG
AAAGTAAAGGGAAAATGACATCTTTGGGTACCAATTAACTGGCATTTTTG
GAGATCAGTGTGAAAAAACTAAAGAGATTTGACGTCGTTTAGTGCATATT
GAACCAGTAAATATCTATTTGTCCAACAAAAGTTTTCACAGGCGCTTTAC
AAGAACGAGAAAGTAACGTTAATTGATCCGATTCTCCAATTAAAGGCAAC
TACTCGATTGAAAATGTACGGAGATTTACGGATTGAGATGGATTGGAATT
TCCAGgtgtattttttataatttttgctgtaaataaatttatgataatta
tgtttataaaataatacaaaaaatgCATTATCTAATTTAAACACTCAACG
ATTATCCAGATGAAAGCGGTCTGATAAAATTAAGCCTTGGTCGGCCAACC
AAAACGAAACTTACACCCCCGCTTGATTGATACTTAAGCTATGTGGTTAA
ATTGAGTACGAGTATGTATGCCCTCTTGGACGAATATAGGCGGATAACTT
TTAGACTAGGAGGAGAACTTATTAACAAATAATTGCATGTTATTATCGAC
ATATCAACCTAGCCGCTATTCTTTAAACAAGAGAAGGATGTTTTTATAAG
TATTTGTATGGTTGACAAGACGAGATTATTTTGTACAAAAGAAG Run BLAST on NCBI transcript from alignment at scaffold_462:642943..644076+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066896 ID=TCONS_00066896|Name=TCONS_00066896|organism=Clytia hemisphaerica|type=transcript|length=1134bp|location=Sequence derived from alignment at scaffold_462:642943..644076+ (Clytia hemisphaerica)
TTNGAAAGGATCAGGAGAAATGATACACGCTAATCATAAATATTTAGGTA
AGATTTTACAGCTTTTTATGCAATTAGACTGAGCCTAGAAGGACTACTTT
CAGGACATTTCAGGTCTAAATTGGTTAATAAAAGGGAAGTAAACTTGCac
gatttttgcaaattttcagccaaatatctgaaaaattctgaaaagccAAT
GTAATTCGCGAATGCTAATTCTCCTGAATCTAACCTTAGTCttaaaagtt
ttctcaaaacaacTTGAAAAGTGAAGGATTTCTACTTGAGATGAATCGAT
TATTATAATAACGAAATCATGACTTCTTGCTTTCTAGGTTTCTTTGATGA
AGACATGCCGAAAGGCCGTGGTAAATACAAATTCGATATTGGATGCGATT
TACATGGTGAATATCAAATCGTTGAAGAGGTCGTTGAAGACTTTAGTAAT
GAAGATGAAGAACCAACAGTTTATTTGAAGTCTGTGTGGGAAAGTAAAGG
GAAAATGACATCTTTGGGTACCAATTAACTGGCATTTTTGGAGATCAGTG
TGAAAAAACTAAAGAGATTTGACGTCGTTTAGTGCATATTGAACCAGTAA
ATATCTATTTGTCCAACAAAAGTTTTCACAGGCGCTTTACAAGAACGAGA
AAGTAACGTTAATTGATCCGATTCTCCAATTAAAGGCAACTACTCGATTG
AAAATGTACGGAGATTTACGGATTGAGATGGATTGGAATTTCCAGgtgta
ttttttataatttttgctgtaaataaatttatgataattatgtttataaa
ataatacaaaaaatgCATTATCTAATTTAAACACTCAACGATTATCCAGA
TGAAAGCGGTCTGATAAAATTAAGCCTTGGTCGGCCAACCAAAACGAAAC
TTACACCCCCGCTTGATTGATACTTAAGCTATGTGGTTAAATTGAGTACG
AGTATGTATGCCCTCTTGGACGAATATAGGCGGATAACTTTTAGACTAGG
AGGAGAACTTATTAACAAATAATTGCATGTTATTATCGACATATCAACCT
AGCCGCTATTCTTTAAACAAGAGAAGGATGTTTTTATAAGTATTTGTATG
GTTGACAAGACGAGATTATTTTGTACAAAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066896-exon-scaffold_462-1491911889:642943..642989 | TCONS_00066896-exon-scaffold_462-1491911889:642943..642989 | Clytia hemisphaerica | exon |
| TCONS_00066896-exon-scaffold_462-1510915933:642943..642989 | TCONS_00066896-exon-scaffold_462-1510915933:642943..642989 | Clytia hemisphaerica | exon |
| TCONS_00066896-exon-scaffold_462-1575043694:642943..642989 | TCONS_00066896-exon-scaffold_462-1575043694:642943..642989 | Clytia hemisphaerica | exon |
| TCONS_00066896-exon-scaffold_462-1491911889:643280..644076 | TCONS_00066896-exon-scaffold_462-1491911889:643280..644076 | Clytia hemisphaerica | exon |
| TCONS_00066896-exon-scaffold_462-1510915933:643280..644076 | TCONS_00066896-exon-scaffold_462-1510915933:643280..644076 | Clytia hemisphaerica | exon |
| TCONS_00066896-exon-scaffold_462-1575043694:643280..644076 | TCONS_00066896-exon-scaffold_462-1575043694:643280..644076 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:642943..644076 + |
Blast
The following BLAST results are available for this feature:
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