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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066910 ID=TCONS_00066910|Name=TCONS_00066910|organism=Clytia hemisphaerica|type=transcript|length=392bp
tctagaTATTTCTTGGGAATAATGATAATTACAATCTGGTGACACATTGG
TTTCGACCACGTATCATTGCTCGATTCGTCAAGATCAAACCTGTATCGTG
GCATCAGAATGTTTGTATGAGATTGGAAATTTATGGCTGCGAAAATGATA
TCAACTCGTATATCATTCAAAAGATTCCAGAAGACCGATGTTTGACAGTT
GGGGAGCGTGTTTATGACAAGAATGGAAGCCCACAATATCCACTGGTTCA
AAAACGTGGATGCGAGGGTTCTGATTTCATGTTTACTTTTCATCCAAGAC
GATTACAACACACAAAGACAGggctttgtttacatttgactGATCAATCA
TGGTTCATTTTCAACAAGACATGTTCAACTGGTAGCCTAATN Run BLAST on NCBI transcript from alignment at scaffold_462:845814..846834+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066910 ID=TCONS_00066910|Name=TCONS_00066910|organism=Clytia hemisphaerica|type=transcript|length=1021bp|location=Sequence derived from alignment at scaffold_462:845814..846834+ (Clytia hemisphaerica)
tctagaTATTTCTTGGGAATAATGATAATTACAATCTGGTGACACATTGG
TTTCGACCACGTATCATTGCTCGATTCGTCAAGATCAAACCTGTATCGTG
GCATCAGAATGTTTGTATGAGATTGGAAATTTATGGCTGCGAAAATGGTA
GCTTTATTAATCAAAAATACTTTATTATACATCTTTCTAactaataataa
ataaaattaacTAATATTTTTACCATCAAATTTAAGGGAATGAATCTTAA
TAACGAAAACCTATCCTTTGAACATCTGCGAAAATAGTAGCTTTATTAAT
CAAAAATACTTTATTATACATCTTTCTAactaataataaataaaattaac
TAATATTTTTACCATCAAATTTAAGGGAATGAATCTTAATAACGAAAACC
TATCCTTTGAACatttgaaatctttcttttcTCTGTTTGTGCGAAGGAAC
TCGCTCATAATGCGCTCATTTGTCGAATTGTTTCAAACTATGTACCAACC
TTTATCATTATCTAGATATCAACTCGTATATCATTCAAAAGATTCCAGAA
GACCGATGTTTGACAGTTGGGGAGCGTGTTTATGACAAGAATGGAAGCCC
ACAATATCCACTGGTTCAAAAACGTGGATGCGAGGGTTCTGATTTCATGT
TTACTTTTCATCCAAGACGATTACAACACACAAAGACAGGTATAttaaat
tttaattcacttaGCCTCATTATTAGAGACTTTCTGCTTTTCGAGATCTA
AACCAGGTAAAAGAAGTTTCGATCCCTACAACACAATAAAGACCTTTGAT
AAGTTGAGTGAAGCAAAGAAGTGAGCTTTTTCTTTGTGTTACCATTTTTC
ATGATAATGTTCTTTGTAATCAATGAAGTTCCAAACTTTAATGAATTTCA
GTTAATGTAACTAGTTTACATCttcattttgttttctcttCACAATTTAg
ggctttgtttacatttgactGATCAATCATGGTTCATTTTCAACAAGACA
TGTTCAACTGGTAGCCTAATN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066910-exon-scaffold_462-1491911889:845814..845960 | TCONS_00066910-exon-scaffold_462-1491911889:845814..845960 | Clytia hemisphaerica | exon |
| TCONS_00066910-exon-scaffold_462-1510915933:845814..845960 | TCONS_00066910-exon-scaffold_462-1510915933:845814..845960 | Clytia hemisphaerica | exon |
| TCONS_00066910-exon-scaffold_462-1575043694:845814..845960 | TCONS_00066910-exon-scaffold_462-1575043694:845814..845960 | Clytia hemisphaerica | exon |
| TCONS_00066910-exon-scaffold_462-1491911889:846329..846502 | TCONS_00066910-exon-scaffold_462-1491911889:846329..846502 | Clytia hemisphaerica | exon |
| TCONS_00066910-exon-scaffold_462-1510915933:846329..846502 | TCONS_00066910-exon-scaffold_462-1510915933:846329..846502 | Clytia hemisphaerica | exon |
| TCONS_00066910-exon-scaffold_462-1575043694:846329..846502 | TCONS_00066910-exon-scaffold_462-1575043694:846329..846502 | Clytia hemisphaerica | exon |
| TCONS_00066910-exon-scaffold_462-1491911889:846764..846834 | TCONS_00066910-exon-scaffold_462-1491911889:846764..846834 | Clytia hemisphaerica | exon |
| TCONS_00066910-exon-scaffold_462-1510915933:846764..846834 | TCONS_00066910-exon-scaffold_462-1510915933:846764..846834 | Clytia hemisphaerica | exon |
| TCONS_00066910-exon-scaffold_462-1575043694:846764..846834 | TCONS_00066910-exon-scaffold_462-1575043694:846764..846834 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:845814..846834 + |
Blast
The following BLAST results are available for this feature:
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