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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067027 ID=TCONS_00067027|Name=TCONS_00067027|organism=Clytia hemisphaerica|type=transcript|length=845bp
TGGGCCTGTTATAACAAATTCTACATTGATATTAGAAGTTCTCATTTTTA
AAGACAGCGTTCGCTTGATAGCTTCATGAGTCGATACTTCACGTTTGGTT
AGAAAGACATTGCCGACAGCACGTAATTTATCTTTTACATCTTTTCCGGA
TGCTTCTTTGTGTGACTTTTTCATGAGTTCACTCATATTTCTTTCTGGCT
TGCACATGTAAGAAGTAATATAAGCTAACACTGCATACATGTTTGTTACA
TACTGAATATTCATGTTGGATTGTAAGATACTAATCATGACAGTATTATA
TGGTCCGATATTAGTTTCATTTGGACTTCTTTTATAGAGCACTGTTAGTT
TCTTTTGAACCATGTTTAAAGCAGTGAAATATTCCTCTCTTGAAAGATCA
CATGATCGCAACAAATCATCAAGGGTAACATCTTGCAGGTCACTATTGCA
ATTATTTATTTCATCAAGAACTTTATCCAAGATTTTTTTACTTGCTCTAT
AATCGTTTTTGTCGATTTGTTTTCCTCGAATGATTTGGGTTTCTTCACAT
GGTGGCCATGGAGCTTTAAATCTACATCTTGATCCACTTTTCTTTCTACA
GGTTGTTGTATGATGATGTTTTTGTACAGTATTCACCAATTCGTAAAGTT
TTGGATACTCTTTGTCTGGTAATGAGCATGTAATGTATCTATCGATAAAA
TCAATAACTTGATTGTCTTTGCTACTGTCATTTTCGTCAATTACAGGGGC
ATCTTTAATATGAATTTGAGCATGGACATGTTCTAGACCTGATCGGTGTT
GGAATTCTCTGCGATCATCATAATTTAAAATTTGTCCTATTGGAT Run BLAST on NCBI protein sequence of TCONS_00067027-protein >TCONS_00067027-protein ID=TCONS_00067027-protein|Name=TCONS_00067027-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
PIGQILNYDDRREFQHRSGLEHVHAQIHIKDAPVIDENDSSKDNQVIDFI
DRYITCSLPDKEYPKLYELVNTVQKHHHTTTCRKKSGSRCRFKAPWPPCE
ETQIIRGKQIDKNDYRASKKILDKVLDEINNCNSDLQDVTLDDLLRSCDL
SREEYFTALNMVQKKLTVLYKRSPNETNIGPYNTVMISILQSNMNIQYVT
NMYAVLAYITSYMCKPERNMSELMKKSHKEASGKDVKDKLRAVGNVFLTK
REVSTHEAIKRTLSLKMRTSNINVEFVITGP Run BLAST on NCBI transcript from alignment at scaffold_462:180614..181458 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067027 ID=TCONS_00067027|Name=TCONS_00067027|organism=Clytia hemisphaerica|type=transcript|length=845bp|location=Sequence derived from alignment at scaffold_462:180614..181458 (Clytia hemisphaerica)
ATCCAATAGGACAAATTTTAAATTATGATGATCGCAGAGAATTCCAACAC
CGATCAGGTCTAGAACATGTCCATGCTCAAATTCATATTAAAGATGCCCC
TGTAATTGACGAAAATGACAGTAGCAAAGACAATCAAGTTATTGATTTTA
TCGATAGATACATTACATGCTCATTACCAGACAAAGAGTATCCAAAACTT
TACGAATTGGTGAATACTGTACAAAAACATCATCATACAACAACCTGTAG
AAAGAAAAGTGGATCAAGATGTAGATTTAAAGCTCCATGGCCACCATGTG
AAGAAACCCAAATCATTCGAGGAAAACAAATCGACAAAAACGATTATAGA
GCAAGTAAAAAAATCTTGGATAAAGTTCTTGATGAAATAAATAATTGCAA
TAGTGACCTGCAAGATGTTACCCTTGATGATTTGTTGCGATCATGTGATC
TTTCAAGAGAGGAATATTTCACTGCTTTAAACATGGTTCAAAAGAAACTA
ACAGTGCTCTATAAAAGAAGTCCAAATGAAACTAATATCGGACCATATAA
TACTGTCATGATTAGTATCTTACAATCCAACATGAATATTCAGTATGTAA
CAAACATGTATGCAGTGTTAGCTTATATTACTTCTTACATGTGCAAGCCA
GAAAGAAATATGAGTGAACTCATGAAAAAGTCACACAAAGAAGCATCCGG
AAAAGATGTAAAAGATAAATTACGTGCTGTCGGCAATGTCTTTCTAACCA
AACGTGAAGTATCGACTCATGAAGCTATCAAGCGAACGCTGTCTTTAAAA
ATGAGAACTTCTAATATCAATGTAGAATTTGTTATAACAGGCCCA Coding sequence (CDS) from alignment at scaffold_462:180614..181458 >TCONS_00067027 ID=TCONS_00067027|Name=TCONS_00067027|organism=Clytia hemisphaerica|type=CDS|length=843bp|location=Sequence derived from alignment at scaffold_462:180614..181458 (Clytia hemisphaerica)
CCAATAGGACAAATTTTAAATTATGATGATCGCAGAGAATTCCAACACCG
ATCAGGTCTAGAACATGTCCATGCTCAAATTCATATTAAAGATGCCCCTG
TAATTGACGAAAATGACAGTAGCAAAGACAATCAAGTTATTGATTTTATC
GATAGATACATTACATGCTCATTACCAGACAAAGAGTATCCAAAACTTTA
CGAATTGGTGAATACTGTACAAAAACATCATCATACAACAACCTGTAGAA
AGAAAAGTGGATCAAGATGTAGATTTAAAGCTCCATGGCCACCATGTGAA
GAAACCCAAATCATTCGAGGAAAACAAATCGACAAAAACGATTATAGAGC
AAGTAAAAAAATCTTGGATAAAGTTCTTGATGAAATAAATAATTGCAATA
GTGACCTGCAAGATGTTACCCTTGATGATTTGTTGCGATCATGTGATCTT
TCAAGAGAGGAATATTTCACTGCTTTAAACATGGTTCAAAAGAAACTAAC
AGTGCTCTATAAAAGAAGTCCAAATGAAACTAATATCGGACCATATAATA
CTGTCATGATTAGTATCTTACAATCCAACATGAATATTCAGTATGTAACA
AACATGTATGCAGTGTTAGCTTATATTACTTCTTACATGTGCAAGCCAGA
AAGAAATATGAGTGAACTCATGAAAAAGTCACACAAAGAAGCATCCGGAA
AAGATGTAAAAGATAAATTACGTGCTGTCGGCAATGTCTTTCTAACCAAA
CGTGAAGTATCGACTCATGAAGCTATCAAGCGAACGCTGTCTTTAAAAAT
GAGAACTTCTAATATCAATGTAGAATTTGTTATAACAGGCCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067027-exon-scaffold_462-1491911889:180614..181458 | TCONS_00067027-exon-scaffold_462-1491911889:180614..181458 | Clytia hemisphaerica | exon |
| TCONS_00067027-exon-scaffold_462-1510915933:180614..181458 | TCONS_00067027-exon-scaffold_462-1510915933:180614..181458 | Clytia hemisphaerica | exon |
| TCONS_00067027-exon-scaffold_462-1575043694:180614..181458 | TCONS_00067027-exon-scaffold_462-1575043694:180614..181458 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:180614..181458 . |
Blast
The following BLAST results are available for this feature:
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