TCONS_00067756 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067756
Unique NameTCONS_00067756
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length319

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067756 ID=TCONS_00067756|Name=TCONS_00067756|organism=Clytia hemisphaerica|type=transcript|length=319bp
ACTATTTTCTTTCAATGGCATTTACCTTTTAAATAGTGGTGACTTCGTTT
AGACTCCTTTATTTCTAAACTATTTTGATATGATTTCATCAAGAATATAT
TTACcattataatatttttataatacaTGCATAATTATTTCATAAGTCGT
ATACAGAGTCTACATTAAGACTGatcttatttattttaaatacaAATTTA
GAATTATTGTTACCTACACTGACCTACATTGTGTTAATATGAAGTTTGGG
TACAAACAACCACTTACGTTtgtatatccctggaccaaactatatccgcc
atctttgatcggagttgNT
Run BLAST on NCBI

transcript from alignment at scaffold_473:179756..180074

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067756 ID=TCONS_00067756|Name=TCONS_00067756|organism=Clytia hemisphaerica|type=transcript|length=319bp|location=Sequence derived from alignment at scaffold_473:179756..180074 (Clytia hemisphaerica)
ANcaactccgatcaaagatggcggatatagtttggtccagggatatacaA
ACGTAAGTGGTTGTTTGTACCCAAACTTCATATTAACACAATGTAGGTCA
GTGTAGGTAACAATAATTCTAAATTtgtatttaaaataaataagatCAGT
CTTAATGTAGACTCTGTATACGACTTATGAAATAATTATGCAtgtattat
aaaaatattataatgGTAAATATATTCTTGATGAAATCATATCAAAATAG
TTTAGAAATAAAGGAGTCTAAACGAAGTCACCACTATTTAAAAGGTAAAT
GCCATTGAAAGAAAATAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042314XLOC_042314Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067756-exon-scaffold_473-1491911889:179756..180074TCONS_00067756-exon-scaffold_473-1491911889:179756..180074Clytia hemisphaericaexon
TCONS_00067756-exon-scaffold_473-1510915933:179756..180074TCONS_00067756-exon-scaffold_473-1510915933:179756..180074Clytia hemisphaericaexon
TCONS_00067756-exon-scaffold_473-1575043694:179756..180074TCONS_00067756-exon-scaffold_473-1575043694:179756..180074Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_473supercontigscaffold_473:179756..180074 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.92479	1.44586	1.72854	1.42888	2.29931	1.57853	1.6584	3.68315	1.42682	0	0.980147	1.01015	1.14687	1.01635	0.633135	1.63094	1.25861	1.14325	0.931273	1.22869	1.15227	0	2.93801	1.82747	0	0.309004	2.15187	1.04402	2.3001	0.462826
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067756 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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