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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067757 ID=TCONS_00067757|Name=TCONS_00067757|organism=Clytia hemisphaerica|type=transcript|length=1226bp
GGGCAACAATATCAACATCATAATAAAATAGAATATAGACTTTTGATGTT
TTGTCTTCGTGGTTGTTCCATGTTTATTTAAAATTGTCGTTAAATATTTA
TATGGTTactgaaaatcaagaaatttggAATTGCTAACATCTATGATTAT
GATGGAAAATCTCTCACTTGACGATCAATCAACAATTCACCCAATTGCCA
AAACCATTTTGCAAGGAATAAAAGATGATGGGAGTCCATTCTCTAAGATG
AATGGAATACCTCATGTTTTGCAAATGATTTGGCGACATGTGCTATGGGa
tatgaaattgaaaaagtggAAAAAGCACATTAAAGTAGACCAGGAGTGGT
TTTTTAAAGGCCGAGATACACCTTTAGTTAGTGGTGCAATTTATAATGGT
CTTATTGAGATTGAGGATATCGAGTTTCCAGAGCCGAAagatattaatat
taatatgaTGCCATTTTTTATGAGTGAAGATTTTGACAGCACATGCCTTC
CTGACTATCTGGAAGAATACCATGACAAAATCTTATCTAATATTGATTAT
AGAGGGCAGGAAGGGGAGATTGGATATCTAACCATTCATGAGAGTTTAGT
AGATGAAGGTCAGTCTCAGCGGAGACCAGGGCTTCACACTGAATCTCCTG
GTATAATTTACGTCAAGAATGAAGGGAAAGCTGAAAAGGGTGATAAATGT
TTTGATGAAAAGGGTGGTGGTAGTGCTGTGGTTTACCCTATGTTAGTTGA
GTGGGGACGAGGTGGTTATGACANAATAAATGTTTTGGGGAAAAGGGTGG
TGGTAGTGCTGTGGTTTACCCCATGTTAGTTGAATGGGGACGAGGTGGTT
ATGACAGTGAATTGGAATTGGATGGTGGTATATACATGGCATCAAACGTG
AGTAATTCATGTGAAGTTTGGGATTGTCAAATCGTTTCTGGTGAAAACGG
TGAAGAAATTATTGGCAAACATGGAGATATTGAGCATTTGCGTAGTCTTT
TACCAGAATCAACCAAGTTGAAAGCAAACATGCTTTACTGGGTGACTGAC
CGTACACCACACGAATCTTTACCTTTGAAGAAAGGTACTTATAGACAATT
TATAAGGGTTGTTACCAAGGATGTTTCTGTTTGGTATAAAGATCATTCGA
CTGAAAATCCTATGGGTATACCACCTGGCGATGCTAAAATTGTCAGAGGA
TCCAAATTTGCTGGTGATGTTTTGAC Run BLAST on NCBI protein sequence of TCONS_00067757-protein >TCONS_00067757-protein ID=TCONS_00067757-protein|Name=TCONS_00067757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MIMMENLSLDDQSTIHPIAKTILQGIKDDGSPFSKMNGIPHVLQMIWRHV
LWDMKLKKWKKHIKVDQEWFFKGRDTPLVSGAIYNGLIEIEDIEFPEPKD
ININMMPFFMSEDFDSTCLPDYLEEYHDKILSNIDYRGQEGEIGYLTIHE
SLVDEGQSQRRPGLHTESPGIIYVKNEGKAEKGDKCFDEKGGGSAVVYPM
LVEWGRGGYDXINVLGKRVVVVLWFTPC Run BLAST on NCBI transcript from alignment at scaffold_473:180821..182046 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067757 ID=TCONS_00067757|Name=TCONS_00067757|organism=Clytia hemisphaerica|type=transcript|length=1226bp|location=Sequence derived from alignment at scaffold_473:180821..182046 (Clytia hemisphaerica)
GTCAAAACATCACCAGCAAATTTGGATCCTCTGACAATTTTAGCATCGCC
AGGTGGTATACCCATAGGATTTTCAGTCGAATGATCTTTATACCAAACAG
AAACATCCTTGGTAACAACCCTTATAAATTGTCTATAAGTACCTTTCTTC
AAAGGTAAAGATTCGTGTGGTGTACGGTCAGTCACCCAGTAAAGCATGTT
TGCTTTCAACTTGGTTGATTCTGGTAAAAGACTACGCAAATGCTCAATAT
CTCCATGTTTGCCAATAATTTCTTCACCGTTTTCACCAGAAACGATTTGA
CAATCCCAAACTTCACATGAATTACTCACGTTTGATGCCATGTATATACC
ACCATCCAATTCCAATTCACTGTCATAACCACCTCGTCCCCATTCAACTA
ACATGGGGTAAACCACAGCACTACCACCACCCTTTTCCCCAAAACATTTA
TTNTGTCATAACCACCTCGTCCCCACTCAACTAACATAGGGTAAACCACA
GCACTACCACCACCCTTTTCATCAAAACATTTATCACCCTTTTCAGCTTT
CCCTTCATTCTTGACGTAAATTATACCAGGAGATTCAGTGTGAAGCCCTG
GTCTCCGCTGAGACTGACCTTCATCTACTAAACTCTCATGAATGGTTAGA
TATCCAATCTCCCCTTCCTGCCCTCTATAATCAATATTAGATAAGATTTT
GTCATGGTATTCTTCCAGATAGTCAGGAAGGCATGTGCTGTCAAAATCTT
CACTCATAAAAAATGGCAtcatattaatattaatatctTTCGGCTCTGGA
AACTCGATATCCTCAATCTCAATAAGACCATTATAAATTGCACCACTAAC
TAAAGGTGTATCTCGGCCTTTAAAAAACCACTCCTGGTCTACTTTAATGT
GCTTTTTccactttttcaatttcatatCCCATAGCACATGTCGCCAAATC
ATTTGCAAAACATGAGGTATTCCATTCATCTTAGAGAATGGACTCCCATC
ATCTTTTATTCCTTGCAAAATGGTTTTGGCAATTGGGTGAATTGTTGATT
GATCGTCAAGTGAGAGATTTTCCATCATAATCATAGATGTTAGCAATTcc
aaatttcttgattttcagtAACCATATAAATATTTAACGACAATTTTAAA
TAAACATGGAACAACCACGAAGACAAAACATCAAAAGTCTATATTCTATT
TTATTATGATGTTGATATTGTTGCCC Coding sequence (CDS) from alignment at scaffold_473:180821..182046 >TCONS_00067757 ID=TCONS_00067757|Name=TCONS_00067757|organism=Clytia hemisphaerica|type=CDS|length=687bp|location=Sequence derived from alignment at scaffold_473:180821..182046 (Clytia hemisphaerica)
CTAACATGGGGTAAACCACAGCACTACCACCACCCTTTTCCCCAAAACAT
TTATTNTGTCATAACCACCTCGTCCCCACTCAACTAACATAGGGTAAACC
ACAGCACTACCACCACCCTTTTCATCAAAACATTTATCACCCTTTTCAGC
TTTCCCTTCATTCTTGACGTAAATTATACCAGGAGATTCAGTGTGAAGCC
CTGGTCTCCGCTGAGACTGACCTTCATCTACTAAACTCTCATGAATGGTT
AGATATCCAATCTCCCCTTCCTGCCCTCTATAATCAATATTAGATAAGAT
TTTGTCATGGTATTCTTCCAGATAGTCAGGAAGGCATGTGCTGTCAAAAT
CTTCACTCATAAAAAATGGCAtcatattaatattaatatctTTCGGCTCT
GGAAACTCGATATCCTCAATCTCAATAAGACCATTATAAATTGCACCACT
AACTAAAGGTGTATCTCGGCCTTTAAAAAACCACTCCTGGTCTACTTTAA
TGTGCTTTTTccactttttcaatttcatatCCCATAGCACATGTCGCCAA
ATCATTTGCAAAACATGAGGTATTCCATTCATCTTAGAGAATGGACTCCC
ATCATCTTTTATTCCTTGCAAAATGGTTTTGGCAATTGGGTGAATTGTTG
ATTGATCGTCAAGTGAGAGATTTTCCATCATAATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067757-exon-scaffold_473-1491911889:180821..182046 | TCONS_00067757-exon-scaffold_473-1491911889:180821..182046 | Clytia hemisphaerica | exon |
| TCONS_00067757-exon-scaffold_473-1510915933:180821..182046 | TCONS_00067757-exon-scaffold_473-1510915933:180821..182046 | Clytia hemisphaerica | exon |
| TCONS_00067757-exon-scaffold_473-1575043694:180821..182046 | TCONS_00067757-exon-scaffold_473-1575043694:180821..182046 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_473 | supercontig | scaffold_473:180821..182046 . |
Blast
The following BLAST results are available for this feature:
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