TCONS_00067761 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067761
Unique NameTCONS_00067761
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067761 ID=TCONS_00067761|Name=TCONS_00067761|organism=Clytia hemisphaerica|type=transcript|length=277bp
gtgaaagAAAAAGTATGTACTTACCAGatgggggtatagccatttgcgta
cgcttgtgTACAGGGGGATGGGTACtctattttcgacattttagtgtgTA
CATATATGTGGACGATACCTTTGTATGATCTTTGTAATTAcattcatatt
tttattttgtttttgtgtaatATTCTTTTAAATGGTATTTAATACCTAAG
CACTGTGTATTTGTATTTTTATACTTGAAGCTTATCTTGTTTTTCAACAC
ATTAAAAAATGCAGTTTAATATTGATA
Run BLAST on NCBI

transcript from alignment at scaffold_473:192410..192686

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067761 ID=TCONS_00067761|Name=TCONS_00067761|organism=Clytia hemisphaerica|type=transcript|length=277bp|location=Sequence derived from alignment at scaffold_473:192410..192686 (Clytia hemisphaerica)
TATCAATATTAAACTGCATTTTTTAATGTGTTGAAAAACAAGATAAGCTT
CAAGTATAAAAATACAAATACACAGTGCTTAGGTATTAAATACCATTTAA
AAGAATattacacaaaaacaaaataaaaatatgaatgTAATTACAAAGAT
CATACAAAGGTATCGTCCACATATATGTAcacactaaaatgtcgaaaata
gaGTACCCATCCCCCTGTAcacaagcgtacgcaaatggctatacccccat
CTGGTAAGTACATACTTTTTctttcac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042319XLOC_042319Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067761-exon-scaffold_473-1491911889:192410..192686TCONS_00067761-exon-scaffold_473-1491911889:192410..192686Clytia hemisphaericaexon
TCONS_00067761-exon-scaffold_473-1510915933:192410..192686TCONS_00067761-exon-scaffold_473-1510915933:192410..192686Clytia hemisphaericaexon
TCONS_00067761-exon-scaffold_473-1575043694:192410..192686TCONS_00067761-exon-scaffold_473-1575043694:192410..192686Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_473supercontigscaffold_473:192410..192686 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.02888	1.50498	0.582476	0	1.3875	3.28927	1.98418	0	0.433509	1.07394	2.60598	2.05569	0.342138	3.19782	0.876348	1.88091	0	2.37498	0.546861	3.43351	0.99478	0.727828	2.94923	4.29005	0	1.97177	2.1162	1.50564	1.14198	1.74524
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067761 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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