TCONS_00067818 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067818
Unique NameTCONS_00067818
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1121

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067818 ID=TCONS_00067818|Name=TCONS_00067818|organism=Clytia hemisphaerica|type=transcript|length=1121bp
AGTAATGTAAGAAAAAGTTATGGAATTGAAAGAGATGCCAATAGATGatg
gaaaattacaaaaattcaacAGTCAATGTTACACTTTCAAGGAACATCCA
TTGATCATGCTGGAACCTTATCATCAGATCTTCCCTTCTACTTTGTATTT
GAACCAACATAAATCGTTTCAAGAATCTGAAGTTTATGAAGATGATGTTT
GGATTTGCACTTTCCCGAAATCAGGCACACATTGGATGCAAGAAATTGTT
TATTGTTTAAGAAATGGAATGGATTTTGAGAAAGCCAAATCATCTAGTCT
CACCCTCAGAGTTccattttttgaCTTTTCATCAGTGACAATGGCCGATC
AGACAGAACAAATTTACAAAGCTCTCGGTAAACCTTGCAAAGCAGGATCT
GAATTAGTTGATCACACCCCTCGACCACGAACAATAAAAACTCATCTCAG
CTACGACATGTTACCTCCCAAGATTCATGAAACAGGTGCTAAGATGATTT
GTGTGGTACGAAACCCCCGAGATGTTTGTGTATCTCTTCTAAATCACTTT
TACTTGACTGAAAATTTCACTGGAGATGTGGAATTGATTGCTGACATCAT
GCTCAAAGACATCGGACCTTTTTACGCTCCTTTCTTCACTCACATTTTGA
GTTATTGGAAGCAATGTGAAAATCCTAATCTACTTATTGTACATTATGAA
GAAATGCAAAAAGATATTGCTGGTATTATTAAGCGAGTGGCAAAGTTCAT
TAATGCAAAGGAATATTCGGATGATCAAATAGAAAAGCTCATTGAGCACA
CATCTCTTGATAACATGAAAGTCAACACATCAGTTAACGGAACTGGTACT
GTTGATACTGTGATTAAATTAATGCAAAATGAGCAAAAAGGAAGTCTCAT
CAACAAAGGGAAAACCGGAGGATGGAAAAATAAACTAAAGGAAGAAACAA
TTCAGAGGTTTCAAAAGTGGGAAGAAAAATGGCTCAAGGACACTGGATTG
TCATTTGCTTACGAACTTTAACATAGGTCTTTTTTATACAAGTGTACATA
TATATTTTCGTTTCATGcttaaattttgtatttttttttttggaatctaa
ggGTGTATAATAAGAGTTTTC
Run BLAST on NCBI

protein sequence of TCONS_00067818-protein

>TCONS_00067818-protein ID=TCONS_00067818-protein|Name=TCONS_00067818-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
MELKEMPIDDGKLQKFNSQCYTFKEHPLIMLEPYHQIFPSTLYLNQHKSF
QESEVYEDDVWICTFPKSGTHWMQEIVYCLRNGMDFEKAKSSSLTLRVPF
FDFSSVTMADQTEQIYKALGKPCKAGSELVDHTPRPRTIKTHLSYDMLPP
KIHETGAKMICVVRNPRDVCVSLLNHFYLTENFTGDVELIADIMLKDIGP
FYAPFFTHILSYWKQCENPNLLIVHYEEMQKDIAGIIKRVAKFINAKEYS
DDQIEKLIEHTSLDNMKVNTSVNGTGTVDTVIKLMQNEQKGSLINKGKTG
GWKNKLKEETIQRFQKWEEKWLKDTGLSFAYEL
Run BLAST on NCBI

transcript from alignment at scaffold_476:310868..316594+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067818 ID=TCONS_00067818|Name=TCONS_00067818|organism=Clytia hemisphaerica|type=transcript|length=5727bp|location=Sequence derived from alignment at scaffold_476:310868..316594+ (Clytia hemisphaerica)
AGTAATGTAAGAAAAAGTTATGGAATTGAAAGAGATGCCAATAGATGatg
gaaaattacaaaaattcaacAGTCAATGTTACACTTTCAAGGAACATCCA
TTGATCATGCTGGAACCTTATCATCAGATCTTCCCTTCTACTTTGTATTT
GAACCAACATAAATCGTTTCAAGAATCTGAAGTTTATGAAGATGATGTTT
GGATTTGCACTTTCCCGAAATCAGGTATGATAACAATGCTGATGGATCCT
TGATGGATTGACGgttataaaattcaaaatcaatttgcTGGAGAACAAAG
TCTATTAAAACGAGACCAAACTCCTTGGCTTTTCACTTATGAATGGTCAA
AATGTCCTGCTGAAAAGACATTCACAGTCATCAAGAGCTGAAGAGTTTTG
GCAATcaaatttcatttgtttttgttttaactagTAACATTAGGACTAAC
CATTTATCTTtcttttcacttgatttttttttaattctacaGGCACACAT
TGGATGCAAGAAATTGTTTATTGTTTAAGAAATGGAATGGATTTTGAGAA
AGCCAAATCATCTAGTCTCACCCTCAGAGTTccattttttgagtaattta
taCTTTATCCTCATTTCTCTcgaactacacgttttttaataagcataGGG
TAAATTTTTGCCAGCCTCGTTATGCTtagcaaaataaatttttgagcctc
gaaTATGCTTATACTATGTTTATGTAATGGTGCAATaatatactttaatc
ggattaattttcgcgagataaAATTTCgtgatttcgcgaattttcgcaaa
attaaaactcgcgaaatcgtTTAAtcgctcattcgcgaaattaaatccac
gcgtaATGTTTGGAATcactgattcgcgaaattaaatccaccttggtatt
tttttatatttgcctATTTTTGGCTTATTTTAGTTTATTAACTTTATTTA
GTTTATGAAGAAAAGTGTTTGAAAAATTCATGTCCAAATAGAActaaaaa
tcgtcattttttctTAACAATCATCAATTCACGAAATTAGATCCATGCGA
AATTTTTGGAATCGGCCATTTGCGAAATTAAACCTATGCGAAATTTTTCG
AActgctcattcgcgaaattcaatccaaaaaatttcgcgaatttttgacc
ACGCGAAATTTcatctcgcgaaatttaatctcgcgaaatttaatcccttt
AAAGTACACATTATGcatgttttttgtaatttgggAGATCAAATGCTTCG
AAATTTTGTAAACTAAGGCTCAGCACATATAGGCAATGCTTAAGTTTTTC
CAAGATTTGAACCTGGACATGCTTATAAGCGTTCAAAAGAACGTCAAgaa
ttttttaaaccttttaagtttttaagactaaaaatgttcttacaatgttc
ttttTTCAGCATTTATTGTGTATTTTGGtgtaatttcctaagaaattgca
tgttctAGAGTCTTTCATTGTTCTTAAAGTTTTGGCCTTGAAgccctatg
ttcttatataccttgttcttatataaaagaaCATGTAGACTGTAGTCATG
CTGTAAACCAAATTATTTTATTCATATAAAGCTTTTCATCAGTGACAATG
GCCGATCAGACAGAACAAATTTACAAAGCTCTCGGTAAACCTTGCAAAGC
AGGATCTGAATTAGTTGATCACACCCCTCGACCACGAACAATAAAAACTC
ATCTCAGCTACGACATGTTACCTCCCAAGATTCATGAAACAGGTGCTAAG
GTAATTCTGATAGAGGACCAGATaccctgtatcagtgacccaGTGAAACC
TTTCACTCAGTATGGGAATGAAGATTTGCATCTAAATTCCTATGTCAATG
AGAATGGAATCTATTGTTTTCAGATTAAAAAAGCCAGTGGGATGATTTTG
GAATGCAATTTCTCCAATTCTATTTCTGATGGGGATGATATTGTTAGGAA
ATTCCACAATTGAGTTGAGataattttgggtattttcccCACCGGGGATG
ATTTTATCGCCAAATTTTTTAGTGGGTTAGGggtcccactgggtctgtga
gagaCAACAAAATTGCAGATTTTCTGAATTTGCAAAGTTaggaaaaatct
ggaaaatattttttttggacatattttaaaGTGTAAAACTAGCCCATTTT
GTTTCTGTCCTTTTCTCTGGAACTGGCGAGCtggtttttcatgattttta
caATGATGCATAATGTTGACATTCAAAATTAGAGAGAGCCGAATTAGTAA
CTTAAAAACATTGTCTAATTCAAGGATAAATTCTCCATATAAATTCAGGA
AAGTTGAACTATAAATTCTTGTAAGAAAGTCTGTTTGCAGTCTCGTGGGT
AATTTTTCAACTGTTTTTAGATGATTTGTGTGGTACGAAACCCCCGAGAT
GTTTGTGTATCTCTTCTAAATCACTTTTACTTGACTGAAAATTTCACTGG
AGATGTGGAATTGATTGCTGACATCATGCTCAAAGACATCGGACCTTTTT
ACGCTCCTTTCTTCACTCACATTTTGAGTTATTGGAAGCAATGTGAAAAT
CCTAATCTACTTATTGTACATTATGAAGAAATGCAAAAAGATATTGCTGG
TATttcttgttttttcattcacttGTTAAGTCATATATTTCAATATGcaa
tctttttataagaataagctTTTGTTGAGGCTTggtatgttcttattttt
ttggtaattttagccccaAATTGTTCCTATCATGGGCTCTTATTTTTAGT
GCAAAGATTGGGCTATCAATTCAATTCTAAATTTGATTCTTAAATTCTTC
TGTgtatattgttcttataaagttcttcaaatagaaaaaagagtgcaGTC
AATTAATCAAGTTATCTTTATTTGTAGTAATCCTCAATTCATACTGTAGA
TTGCACCAGTTTCTTGCACCAACAAAAAAGCatttacttttatttctttA
AGGTATTATTAAGCGAGTGGCAAAGTTCATTAATGCAAAGGAATATTCGG
ATGATCAAATAGAAAAGCTCATTGAGCACACATCTCTTGATAACATGAAA
GTCAACACATCAGTTAACGGAACTGGTACTGTTGATGTAAGTATTATCCA
CAACTACTGCGCTAGACTATGACAAAATATTGACGGTTGATATCATGTTC
ATGTTGATATATTACGATTTTCTGtcaatataccgggtgcgccaaaaata
agtatacaggtttgtcgagatattgtgagctttaggatttaaaatttttc
ttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtttgataaccta
acgaggagtgttttctatgagttcttaatccacctattctaatccgttga
ttAGACATAAAAATACCACAAAATACAACTGTGTCCATCAAAACTCATTA
GGAAAttcaaaaatatggaaaaacaagctattcccatgtgagataatatt
tttggaaaagctgaaaaaagctttagaaaTCTTCAAGAGATGTTTCAATA
TTATGTGTGTGCTGTGTGAGAAAACTTTTGGAAAAACAGATCACTATGCC
TCGATTAACAGTTGCTATTAAAAGAACTCAAGCTCAAAAACTTGGGTCTA
CATTGAGTTTGCTCATGTTGGAAATGCTCATGAGGTGAAAAGGAGATGGA
GAAACCGTTGGCAAACTATTAAACCTCTTACCATTAGAAGAAATTGTGCT
TTTATCATTCATTTTGTCTTCTTAATAGCGTGATTGTTAAAAGACATTTT
CTCgctgtttttgctgattttttgaaatttcgacattagaAAAAGTCAGC
TTTTTTTAGATAACTtttgaactactttttcaaattcaatgtaCGATAGC
CCAAAACCCAAGTTAGAGCttcctctatacgataaaaatTGACAAACAAT
TTAAATTCTAAAGCTCACAATACCTCGATGAACCTGTATACTTATTTTTG
GCGCACCCGGTTTAGCGGCAAATTAAGACTCTGGGAGATTAGAACTTCAA
AGTCCTGATTTCCCAGGATATTATGACTTCACGAGTCGTAATCTCCCGGT
AAATTTAGATCGAAGTAGTAAAATAAGACTCGAAATAAAAAGCGTTTTTA
AAGGTAGAAGAGTCCTATTTTCCCGGTGGAAAATGACTTCGCTAACTAAA
AGGGAATTCCtacattttcgaatgttttgtttgttAGTAAATTCAAGGGT
GATGGGGAGATGAACTTGCTTATTCATACAAATATACCGTTGTGTTATAA
AAGATATGAATAAAAAATCATTCTTTAATCTTCTTCATTTCACATGAATT
TACCAATATTATTCTAGAAATTTTGACTCACATGACAAAATTTATAcatt
attggaactaattttgagGGAAAGAgattttagaaagaaaaaaaaattaa
accaaatatagCTTACTTAttgggtcaaatttttgctgGAAATAATTATT
GaggtcaaaaaataaaatcgaaaaaaaaattcattttgcgGAAACTATTG
GTTTTGGATATTTTCGAACGAATTCCATTCATTTTTTTAGTGGTATAACT
TCTATGGAATTTGCACCATGTCAATGAGATAAGAATTAATCGAGCTACTA
AATCCATTCTTTCTATCCACTGTAGGGACAAAACGCCTCTATTCAAGCCT
TTTTCGTGAAATATCTCTTTGAAGAAAATagaattaaaacatttttatag
aGTCCTAATTTCCCTCCCCAATCCTAATTTCCCGGGCATTTAGGACCCAA
AAGGTCTTTATTTCCCGGGAAATCAGGACTTTAAGGTCTTAATCTCCCGG
GTCTTAATTTACGGTGACACCGGTATATTGTAAAAGTGCTCACAATTAAT
TATATAGGGCTCACAATATATTGTACATAGAGGGGTCCACAATTAATTGC
TAACTACTTTTGGTATTGGACGGAAATATCCCGGTACTTGTCGGAAGATT
TTGACCGATATTAAAGTAATCTTTGGCCGATACACCGTACCCTCAGAGCC
CCCCACTTCTATTATAGGGTAGTTAAAGCACAAAAATGCAATTAAATTAT
CTCTTTTTTCAGACTGTGATTAAATTAATGCAAAATGAGCAAAAAGGAAG
TCTCATCAACAAAGGGAAAACCGGAGGATGGAAAAATAAACTAAAGGAAG
AAACAATTCAGAGGTTTCAAAAGTGGGAAGAAAAATGGCTCAAGGACACT
GGATTGTCATTTGCTTACGAACTTTAACATAGGTCTTTTTTATACAAGTG
TACATATATATTTTCGTTTCATGcttaaattttgtatttttttttttgga
atctaaggGTGTATAATAAGAGTTTTC

Coding sequence (CDS) from alignment at scaffold_476:310868..316594+

>TCONS_00067818 ID=TCONS_00067818|Name=TCONS_00067818|organism=Clytia hemisphaerica|type=CDS|length=6012bp|location=Sequence derived from alignment at scaffold_476:310868..316594+ (Clytia hemisphaerica)
ATGGAATTGAAAGAGATGCCAATAGATGatggaaaattacaaaaattcaa
cAGTCAATGTTACACTTTCAAGGAACATCCATTGATCATGCTGGAACCTT
ATCATCAGATCTTCCCTTCTACTTTGTATTTGAACCAACATAAATCGTTT
CAAGAATCTGAAGTTTATGAAGATGATGTTTGGATTTGCACTTTCCCGAA
ATCAGGCACACATTGGATGCAAGAAATTGTTTATTGTTTAAGAAATGGAA
TGGATTTTGAGAAAGCCAAATCATCTAGTCTCACCCTCAGAGTTccattt
tttgaCTTTTCATCAGTGACAATGGCCGATCAGACAGAACAAATTTACAA
AGCTCTCGGTAAACCTTGCAAAGCAGGATCTGAATTAGTTGATCACACCC
CTCGACCACGAACAATAAAAACTCATCTCAGCTACGACATGTTACCTCCC
AAGATTCATGAAACAGGTGCTAAGATGATTTGTGTGGTACGAAACCCCCG
AGATGTTTGTGTATCTCTTCTAAATCACTTTTACTTGACTGAAAATTTCA
CTGGAGATGTGGAATTGATTGCTGACATCATGCTCAAAGACATCGGACCT
TTTTACGCTCCTTTCTTCACTCACATTTTGAGTTATTGGAAGCAATGTGA
AAATCCTAATCTACTTATTGTACATTATGAAGAAATGCAAAAAGATATTG
CTGGTATTATTAAGCGAGTGGCAAAGTTCATTAATGCAAAGGAATATTCG
GATGATCAAATAGAAAAGCTCATTGAGCACACATCTCTTGATAACATGAA
AGTCAACACATCAGTTAACGGAACTGGTACTGTTGATACTGTGATTAAAT
TAATGCAAAATGAGCAAAAAGGAAGTCTCATCAACAAAGGGAAAACCGGA
GGATGGAAAAATAAACTAAAGGAAGAAACAATTCAGAGGTTTCAAAAGTG
GGAAGAAAAATGGCTCAAGGACACTGGATTGTCATTTGCTTACGAACTTT
AAATGGAATTGAAAGAGATGCCAATAGATGatggaaaattacaaaaattc
aacAGTCAATGTTACACTTTCAAGGAACATCCATTGATCATGCTGGAACC
TTATCATCAGATCTTCCCTTCTACTTTGTATTTGAACCAACATAAATCGT
TTCAAGAATCTGAAGTTTATGAAGATGATGTTTGGATTTGCACTTTCCCG
AAATCAGGCACACATTGGATGCAAGAAATTGTTTATTGTTTAAGAAATGG
AATGGATTTTGAGAAAGCCAAATCATCTAGTCTCACCCTCAGAGTTccat
tttttgaCTTTTCATCAGTGACAATGGCCGATCAGACAGAACAAATTTAC
AAAGCTCTCGGTAAACCTTGCAAAGCAGGATCTGAATTAGTTGATCACAC
CCCTCGACCACGAACAATAAAAACTCATCTCAGCTACGACATGTTACCTC
CCAAGATTCATGAAACAGGTGCTAAGATGATTTGTGTGGTACGAAACCCC
CGAGATGTTTGTGTATCTCTTCTAAATCACTTTTACTTGACTGAAAATTT
CACTGGAGATGTGGAATTGATTGCTGACATCATGCTCAAAGACATCGGAC
CTTTTTACGCTCCTTTCTTCACTCACATTTTGAGTTATTGGAAGCAATGT
GAAAATCCTAATCTACTTATTGTACATTATGAAGAAATGCAAAAAGATAT
TGCTGGTATTATTAAGCGAGTGGCAAAGTTCATTAATGCAAAGGAATATT
CGGATGATCAAATAGAAAAGCTCATTGAGCACACATCTCTTGATAACATG
AAAGTCAACACATCAGTTAACGGAACTGGTACTGTTGATACTGTGATTAA
ATTAATGCAAAATGAGCAAAAAGGAAGTCTCATCAACAAAGGGAAAACCG
GAGGATGGAAAAATAAACTAAAGGAAGAAACAATTCAGAGGTTTCAAAAG
TGGGAAGAAAAATGGCTCAAGGACACTGGATTGTCATTTGCTTACGAACT
TTAAATGGAATTGAAAGAGATGCCAATAGATGatggaaaattacaaaaat
tcaacAGTCAATGTTACACTTTCAAGGAACATCCATTGATCATGCTGGAA
CCTTATCATCAGATCTTCCCTTCTACTTTGTATTTGAACCAACATAAATC
GTTTCAAGAATCTGAAGTTTATGAAGATGATGTTTGGATTTGCACTTTCC
CGAAATCAGGCACACATTGGATGCAAGAAATTGTTTATTGTTTAAGAAAT
GGAATGGATTTTGAGAAAGCCAAATCATCTAGTCTCACCCTCAGAGTTcc
attttttgaCTTTTCATCAGTGACAATGGCCGATCAGACAGAACAAATTT
ACAAAGCTCTCGGTAAACCTTGCAAAGCAGGATCTGAATTAGTTGATCAC
ACCCCTCGACCACGAACAATAAAAACTCATCTCAGCTACGACATGTTACC
TCCCAAGATTCATGAAACAGGTGCTAAGATGATTTGTGTGGTACGAAACC
CCCGAGATGTTTGTGTATCTCTTCTAAATCACTTTTACTTGACTGAAAAT
TTCACTGGAGATGTGGAATTGATTGCTGACATCATGCTCAAAGACATCGG
ACCTTTTTACGCTCCTTTCTTCACTCACATTTTGAGTTATTGGAAGCAAT
GTGAAAATCCTAATCTACTTATTGTACATTATGAAGAAATGCAAAAAGAT
ATTGCTGGTATTATTAAGCGAGTGGCAAAGTTCATTAATGCAAAGGAATA
TTCGGATGATCAAATAGAAAAGCTCATTGAGCACACATCTCTTGATAACA
TGAAAGTCAACACATCAGTTAACGGAACTGGTACTGTTGATACTGTGATT
AAATTAATGCAAAATGAGCAAAAAGGAAGTCTCATCAACAAAGGGAAAAC
CGGAGGATGGAAAAATAAACTAAAGGAAGAAACAATTCAGAGGTTTCAAA
AGTGGGAAGAAAAATGGCTCAAGGACACTGGATTGTCATTTGCTTACGAA
CTTTAAATGGAATTGAAAGAGATGCCAATAGATGatggaaaattacaaaa
attcaacAGTCAATGTTACACTTTCAAGGAACATCCATTGATCATGCTGG
AACCTTATCATCAGATCTTCCCTTCTACTTTGTATTTGAACCAACATAAA
TCGTTTCAAGAATCTGAAGTTTATGAAGATGATGTTTGGATTTGCACTTT
CCCGAAATCAGGCACACATTGGATGCAAGAAATTGTTTATTGTTTAAGAA
ATGGAATGGATTTTGAGAAAGCCAAATCATCTAGTCTCACCCTCAGAGTT
ccattttttgaCTTTTCATCAGTGACAATGGCCGATCAGACAGAACAAAT
TTACAAAGCTCTCGGTAAACCTTGCAAAGCAGGATCTGAATTAGTTGATC
ACACCCCTCGACCACGAACAATAAAAACTCATCTCAGCTACGACATGTTA
CCTCCCAAGATTCATGAAACAGGTGCTAAGATGATTTGTGTGGTACGAAA
CCCCCGAGATGTTTGTGTATCTCTTCTAAATCACTTTTACTTGACTGAAA
ATTTCACTGGAGATGTGGAATTGATTGCTGACATCATGCTCAAAGACATC
GGACCTTTTTACGCTCCTTTCTTCACTCACATTTTGAGTTATTGGAAGCA
ATGTGAAAATCCTAATCTACTTATTGTACATTATGAAGAAATGCAAAAAG
ATATTGCTGGTATTATTAAGCGAGTGGCAAAGTTCATTAATGCAAAGGAA
TATTCGGATGATCAAATAGAAAAGCTCATTGAGCACACATCTCTTGATAA
CATGAAAGTCAACACATCAGTTAACGGAACTGGTACTGTTGATACTGTGA
TTAAATTAATGCAAAATGAGCAAAAAGGAAGTCTCATCAACAAAGGGAAA
ACCGGAGGATGGAAAAATAAACTAAAGGAAGAAACAATTCAGAGGTTTCA
AAAGTGGGAAGAAAAATGGCTCAAGGACACTGGATTGTCATTTGCTTACG
AACTTTAAATGGAATTGAAAGAGATGCCAATAGATGatggaaaattacaa
aaattcaacAGTCAATGTTACACTTTCAAGGAACATCCATTGATCATGCT
GGAACCTTATCATCAGATCTTCCCTTCTACTTTGTATTTGAACCAACATA
AATCGTTTCAAGAATCTGAAGTTTATGAAGATGATGTTTGGATTTGCACT
TTCCCGAAATCAGGCACACATTGGATGCAAGAAATTGTTTATTGTTTAAG
AAATGGAATGGATTTTGAGAAAGCCAAATCATCTAGTCTCACCCTCAGAG
TTccattttttgaCTTTTCATCAGTGACAATGGCCGATCAGACAGAACAA
ATTTACAAAGCTCTCGGTAAACCTTGCAAAGCAGGATCTGAATTAGTTGA
TCACACCCCTCGACCACGAACAATAAAAACTCATCTCAGCTACGACATGT
TACCTCCCAAGATTCATGAAACAGGTGCTAAGATGATTTGTGTGGTACGA
AACCCCCGAGATGTTTGTGTATCTCTTCTAAATCACTTTTACTTGACTGA
AAATTTCACTGGAGATGTGGAATTGATTGCTGACATCATGCTCAAAGACA
TCGGACCTTTTTACGCTCCTTTCTTCACTCACATTTTGAGTTATTGGAAG
CAATGTGAAAATCCTAATCTACTTATTGTACATTATGAAGAAATGCAAAA
AGATATTGCTGGTATTATTAAGCGAGTGGCAAAGTTCATTAATGCAAAGG
AATATTCGGATGATCAAATAGAAAAGCTCATTGAGCACACATCTCTTGAT
AACATGAAAGTCAACACATCAGTTAACGGAACTGGTACTGTTGATACTGT
GATTAAATTAATGCAAAATGAGCAAAAAGGAAGTCTCATCAACAAAGGGA
AAACCGGAGGATGGAAAAATAAACTAAAGGAAGAAACAATTCAGAGGTTT
CAAAAGTGGGAAGAAAAATGGCTCAAGGACACTGGATTGTCATTTGCTTA
CGAACTTTAAATGGAATTGAAAGAGATGCCAATAGATGatggaaaattac
aaaaattcaacAGTCAATGTTACACTTTCAAGGAACATCCATTGATCATG
CTGGAACCTTATCATCAGATCTTCCCTTCTACTTTGTATTTGAACCAACA
TAAATCGTTTCAAGAATCTGAAGTTTATGAAGATGATGTTTGGATTTGCA
CTTTCCCGAAATCAGGCACACATTGGATGCAAGAAATTGTTTATTGTTTA
AGAAATGGAATGGATTTTGAGAAAGCCAAATCATCTAGTCTCACCCTCAG
AGTTccattttttgaCTTTTCATCAGTGACAATGGCCGATCAGACAGAAC
AAATTTACAAAGCTCTCGGTAAACCTTGCAAAGCAGGATCTGAATTAGTT
GATCACACCCCTCGACCACGAACAATAAAAACTCATCTCAGCTACGACAT
GTTACCTCCCAAGATTCATGAAACAGGTGCTAAGATGATTTGTGTGGTAC
GAAACCCCCGAGATGTTTGTGTATCTCTTCTAAATCACTTTTACTTGACT
GAAAATTTCACTGGAGATGTGGAATTGATTGCTGACATCATGCTCAAAGA
CATCGGACCTTTTTACGCTCCTTTCTTCACTCACATTTTGAGTTATTGGA
AGCAATGTGAAAATCCTAATCTACTTATTGTACATTATGAAGAAATGCAA
AAAGATATTGCTGGTATTATTAAGCGAGTGGCAAAGTTCATTAATGCAAA
GGAATATTCGGATGATCAAATAGAAAAGCTCATTGAGCACACATCTCTTG
ATAACATGAAAGTCAACACATCAGTTAACGGAACTGGTACTGTTGATACT
GTGATTAAATTAATGCAAAATGAGCAAAAAGGAAGTCTCATCAACAAAGG
GAAAACCGGAGGATGGAAAAATAAACTAAAGGAAGAAACAATTCAGAGGT
TTCAAAAGTGGGAAGAAAAATGGCTCAAGGACACTGGATTGTCATTTGCT
TACGAACTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042352XLOC_042352Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067818-proteinTCONS_00067818-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067818-exon-scaffold_476-1491911889:310868..311091TCONS_00067818-exon-scaffold_476-1491911889:310868..311091Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1510915933:310868..311091TCONS_00067818-exon-scaffold_476-1510915933:310868..311091Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1575043694:310868..311091TCONS_00067818-exon-scaffold_476-1575043694:310868..311091Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1491911889:311360..311459TCONS_00067818-exon-scaffold_476-1491911889:311360..311459Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1510915933:311360..311459TCONS_00067818-exon-scaffold_476-1510915933:311360..311459Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1575043694:311360..311459TCONS_00067818-exon-scaffold_476-1575043694:311360..311459Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1491911889:312449..312617TCONS_00067818-exon-scaffold_476-1491911889:312449..312617Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1510915933:312449..312617TCONS_00067818-exon-scaffold_476-1510915933:312449..312617Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1575043694:312449..312617TCONS_00067818-exon-scaffold_476-1575043694:312449..312617Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1491911889:313238..313466TCONS_00067818-exon-scaffold_476-1491911889:313238..313466Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1510915933:313238..313466TCONS_00067818-exon-scaffold_476-1510915933:313238..313466Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1575043694:313238..313466TCONS_00067818-exon-scaffold_476-1575043694:313238..313466Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1491911889:313820..313953TCONS_00067818-exon-scaffold_476-1491911889:313820..313953Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1510915933:313820..313953TCONS_00067818-exon-scaffold_476-1510915933:313820..313953Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1575043694:313820..313953TCONS_00067818-exon-scaffold_476-1575043694:313820..313953Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1491911889:316330..316594TCONS_00067818-exon-scaffold_476-1491911889:316330..316594Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1510915933:316330..316594TCONS_00067818-exon-scaffold_476-1510915933:316330..316594Clytia hemisphaericaexon
TCONS_00067818-exon-scaffold_476-1575043694:316330..316594TCONS_00067818-exon-scaffold_476-1575043694:316330..316594Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_476supercontigscaffold_476:310868..316594 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
100.843	93.9587	72.0759	70.4407	26.2128	20.0411	15.7545	13.0087	5.22501	7.49229	8.45349	3.60845	4.61014	5.69534	0.95376	0.705823	16.8749	29.4426	0.561361	0.743491	46.2838	43.8981	60.1211	58.7265	3.49165	1.70542	5.02142	4.59263	24.831	34.0611
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000863Sulfotransferase_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0008146sulfotransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008146 sulfotransferase activity
Blast
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BLAST of TCONS_00067818 vs. Swiss-Prot (Human)
Match: ST1B1 (Sulfotransferase family cytosolic 1B member 1 OS=Homo sapiens GN=SULT1B1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.070e-36
Identity = 92/279 (32.97%), Postives = 139/279 (49.82%), Query Frame = 2 
Query:  191 DDVWICTFPKSGTHWMQEIVYCLRNGMDFEKAKSSSLTLRVPFFDFSSVTMADQTEQIYKALGKPCKAGSELVDHTPRPRTIKTHLSYDMLPPKIHETGAKMICVVRNPRDVCVSLLNHFYLTEN---FTGDVELIADIMLKDIGPFYAPFFTHILSYWKQCENPNLLIVHYEEMQKDIAGIIKRVAKFINAKEYSDDQIEKLIEHTSLDNMKVNTSVNGTGTVDTVIKLMQNEQKGSLINKGKTGGWKNKLKEETIQRFQKWEEKWLKDTGLSFAYEL 1018
            DD+ I T+PKSGT W+ EI+  + N  D EK K   +T +VP  + +              L     +G E ++  P PR +KTHL  D+LP    E   KMI + RN +DV VS   HF L  N   F G  E   +  L      Y  +FTH+ ++WK+ E   +L ++YE+M+++    IK++ +F+  K  +D+ ++++I HTS + MK N  VN T    TV+    +  K   + KG  G WKN       ++F    E  +  T L F  E+
Sbjct:   39 DDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFITEKVPMLEMT--------------LPGLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYY-HFDLMNNLQPFPGTWEEYLEKFLTG-KVAYGSWFTHVKNWWKKKEEHPILFLYYEDMKENPKEEIKKIIRFLE-KNLNDEILDRIIHHTSFEVMKDNPLVNYTHLPTTVM----DHSKSPFMRKGTAGDWKNYFTVAQNEKFDAIYETEMSKTALQFRTEI 296
The following BLAST results are available for this feature:
BLAST of TCONS_00067818 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ST1B11.070e-3632.97Sulfotransferase family cytosolic 1B member 1 OS=H... [more]
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