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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067837 ID=TCONS_00067837|Name=TCONS_00067837|organism=Clytia hemisphaerica|type=transcript|length=1883bp
AATGAAGATTCcgatgttttcttttttcgttcaaaaaaaaaaaaatgagc
atgtttccAAAACACCACATGACTCCGCATTGAAAATCTATATACAGTGC
ATTTGCATAAATTATTCAAATTCtaatcataaaataaaataaactagTGC
ATAAATTAATATGATATGTGGAGGAGATTGAACGATTGAATATCACTCTT
CTTGTCTTTGGTACCGTTACcgttaaatattttaaaacctAATTGTTAAC
TTCCCTCCTGTTGATTGTTCCATGTACCTTTAGTTTGTACAAACTATCCT
GCTTGCTCCGTTATCAAAGTCGGCTGGGTTTCTCCAATATTCTTGCAAAT
TACTGCCCCCACAATTCGAAGGCGCGCCACAAAAAGTATTCTTAAGAGGG
TTTTCAGCGTTCGTTAGCCATACTCTTCCTAACAGATCGCATCAGTTTGT
TCAAGCCAGCACCAGCTAGCGTTCTGCCATCTGAATGATACAGCTTCGCT
TCTCTCTGGATAATATTCTGTTGGAAGACCACTCTTTGTAGACGAGCTTG
AAACAATCCGCTAGCAAGCTGTGTGTTAAAATGAGAAGCGTTTCTATCCA
TGGAGGCGTTATCGAGGCGTGGCAGAAGGGCGTACACAAAGACTTGGCCA
GAGATTCGTTTGAGTAGGTTACGAATACTATTGAGCATGACCAAAGCTAG
TTCTGAAGGTGATGCAGTTCTCTGTTCTAAGTTATTTGCTCCCACCAAGA
TGCAAACGCTTGTGACGTCAGTGTTAGGGTTTTCGATGACGAAATCGGTC
AACTTTTCGAATGCTGTTTCGATGGTGTAATGCGATTTGCAGAAACTCTC
CACGCGTTTGGTGGTATCGGATACCAAGCGTTTTTGTGAGATCATATCAA
GGGTGCTGTCTCCTAACAGAACACAGACTTCTGGTCGAATCTCACTTTGG
TGGAGCTCTTCCAGCAGACTAGTTGTCGAGCCTCGACGTCTGACGGACGC
TTTAATTTTGCCATTTGTATTGAGCGAGGAGCTTGAATGACTTCTAGGGA
TGGTcgctttctttgattttgcaGAGCTAGGCGCTGATCTCGCACTATTT
GAATTGTAGCCTAGTTTCTTGGTTTGTTCGGCCATTGTGCTGTTGCGACG
AGCGATACGTGACGTCAGAGAACGCGACGTCAGCGGATCTTCGAAgttga
ttttgataaaatctttgcAGAGTTTGATGTCATTTTTGACGACCATAATT
TCTTCATGTAAACGAATTTTCAACTGAAGAAGTTCGTCACTGATCTCCTT
TCCATGGTGGAAAGATTTCCAATCGTCTCGATAGTGACCGCTCGGCTTCA
TCGCTTTCAAATTGTAAATCTTCTCCATGCTTTCGACCGTACGGTCTTGT
ATGGCCGCTTGATCATTATCACGGATAGTTTCCTCGATGGAGACATATCT
TTTCTTATCTGTCACCACGTACATGATATTCTCCATGATGTTCAAAACTT
GAGCCCGCTCTGTCATACTGAGTCGTGATTGGTCGAGATTGTTGCGCAAA
TGACGTAAGAAAACATCCTTGTGAAGCTTGGAATCCCAGGTGTGAAGCTG
TCGGCATAAGTCTAACGCCATGATGACTTGTTGGTTCTGATTctttgtcg
ccattttgattcgAAAGTGAGAGTTCTTTCACTGTTGAAATACAACAAGA
ATTCTTCTGCcagaaattgaacttttttgGTTTCTGTGTTTCTTCTAGCT
TAGGGAGAAAACACCAAACCAAACGCTGTGCAGCAACACGACCTTCTTTG
AAGCTATCGCCTATCGAACGAAGAGTTGAAATTTTCTGACGAAGAATGAA
GAAGGAAAAAAGTATAAgtatattcttgatatt Run BLAST on NCBI transcript from alignment at scaffold_476:254642..256524- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067837 ID=TCONS_00067837|Name=TCONS_00067837|organism=Clytia hemisphaerica|type=transcript|length=1883bp|location=Sequence derived from alignment at scaffold_476:254642..256524- (Clytia hemisphaerica)
AATGAAGATTCCGATGTTTTCTTTTTTCGTTCAAAAAAAAAAAAATGAGC
ATGTTTCCAAAACACCACATGACTCCGCATTGAAAATCTATATACAGTGC
ATTTGCATAAATTATTCAAATTCTAATCATAAAATAAAATAAACTAGTGC
ATAAATTAATATGATATGTGGAGGAGATTGAACGATTGAATATCACTCTT
CTTGTCTTTGGTACCGTTACCGTTAAATATTTTAAAACCTAATTGTTAAC
TTCCCTCCTGTTGATTGTTCCATGTACCTTTAGTTTGTACAAACTATCCT
GCTTGCTCCGTTATCAAAGTCGGCTGGGTTTCTCCAATATTCTTGCAAAT
TACTGCCCCCACAATTCGAAGGCGCGCCACAAAAAGTATTCTTAAGAGGG
TTTTCAGCGTTCGTTAGCCATACTCTTCCTAACAGATCGCATCAGTTTGT
TCAAGCCAGCACCAGCTAGCGTTCTGCCATCTGAATGATACAGCTTCGCT
TCTCTCTGGATAATATTCTGTTGGAAGACCACTCTTTGTAGACGAGCTTG
AAACAATCCGCTAGCAAGCTGTGTGTTAAAATGAGAAGCGTTTCTATCCA
TGGAGGCGTTATCGAGGCGTGGCAGAAGGGCGTACACAAAGACTTGGCCA
GAGATTCGTTTGAGTAGGTTACGAATACTATTGAGCATGACCAAAGCTAG
TTCTGAAGGTGATGCAGTTCTCTGTTCTAAGTTATTTGCTCCCACCAAGA
TGCAAACGCTTGTGACGTCAGTGTTAGGGTTTTCGATGACGAAATCGGTC
AACTTTTCGAATGCTGTTTCGATGGTGTAATGCGATTTGCAGAAACTCTC
CACGCGTTTGGTGGTATCGGATACCAAGCGTTTTTGTGAGATCATATCAA
GGGTGCTGTCTCCTAACAGAACACAGACTTCTGGTCGAATCTCACTTTGG
TGGAGCTCTTCCAGCAGACTAGTTGTCGAGCCTCGACGTCTGACGGACGC
TTTAATTTTGCCATTTGTATTGAGCGAGGAGCTTGAATGACTTCTAGGGA
TGGTCGCTTTCTTTGATTTTGCAGAGCTAGGCGCTGATCTCGCACTATTT
GAATTGTAGCCTAGTTTCTTGGTTTGTTCGGCCATTGTGCTGTTGCGACG
AGCGATACGTGACGTCAGAGAACGCGACGTCAGCGGATCTTCGAAGTTGA
TTTTGATAAAATCTTTGCAGAGTTTGATGTCATTTTTGACGACCATAATT
TCTTCATGTAAACGAATTTTCAACTGAAGAAGTTCGTCACTGATCTCCTT
TCCATGGTGGAAAGATTTCCAATCGTCTCGATAGTGACCGCTCGGCTTCA
TCGCTTTCAAATTGTAAATCTTCTCCATGCTTTCGACCGTACGGTCTTGT
ATGGCCGCTTGATCATTATCACGGATAGTTTCCTCGATGGAGACATATCT
TTTCTTATCTGTCACCACGTACATGATATTCTCCATGATGTTCAAAACTT
GAGCCCGCTCTGTCATACTGAGTCGTGATTGGTCGAGATTGTTGCGCAAA
TGACGTAAGAAAACATCCTTGTGAAGCTTGGAATCCCAGGTGTGAAGCTG
TCGGCATAAGTCTAACGCCATGATGACTTGTTGGTTCTGATTCTTTGTCG
CCATTTTGATTCGAAAGTGAGAGTTCTTTCACTGTTGAAATACAACAAGA
ATTCTTCTGCCAGAAATTGAACTTTTTTGGTTTCTGTGTTTCTTCTAGCT
TAGGGAGAAAACACCAAACCAAACGCTGTGCAGCAACACGACCTTCTTTG
AAGCTATCGCCTATCGAACGAAGAGTTGAAATTTTCTGACGAAGAATGAA
GAAGGAAAAAAGTATAAGTATATTCTTGATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067837-exon-scaffold_476-1575043694:254642..256524 | TCONS_00067837-exon-scaffold_476-1575043694:254642..256524 | Clytia hemisphaerica | exon |
| TCONS_00067837-exon-scaffold_476-1510915933:254642..256524 | TCONS_00067837-exon-scaffold_476-1510915933:254642..256524 | Clytia hemisphaerica | exon |
| TCONS_00067837-exon-scaffold_476-1491911889:254642..256524 | TCONS_00067837-exon-scaffold_476-1491911889:254642..256524 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_476 | supercontig | scaffold_476:254642..256524 - |
Blast
The following BLAST results are available for this feature:
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