|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067849 ID=TCONS_00067849|Name=TCONS_00067849|organism=Clytia hemisphaerica|type=transcript|length=1152bp
GAGGATTTATAAGTTGACTGGCGTTGAACGACACTCTGCTTTTCTCAACG
TTGGAAACGTAGGAGATAATCTAGATTGAGATGATCTTAAAAATGCTTGA
AAGTGAAGAGAAAATATTTAACTGTTAACTATTTTTAAGCCAGGGGAAAT
GCTTTTAAAGTAGACACTCAAATTCAACTGGCTTGGCTGAACCTGAGCTA
ATGATATAAAAAGATTTAAATTGGTGAAAGAAAGGATTAATGAAAAAGAA
ACTGCCAAAAAACTTGGAAATACATCTAGACCATTTTAGATGGTGAGTCT
AGTAATAACCAACACAAGGACAAAGTATTTGTAAAAGATGATGcaacaaa
agttaaaaactaTATTACTGATTCTGTCAAAGACAGACAAGAAAAGATTT
TCGAACCAAACACCTCTAAAGAGTCGGTCAATCACTGGTTTGAAAATACA
CAATTCCATTGAAGAGGAAGGTTCTCCATATCATATGTTCAATCCACTTT
CAACAAATTACTTACAAGTAGAAAAATCCAAAGGTGAAGAATGAATGCTG
TCTTTATAGACTTCAAAAAAGATTATCAGGAGGCCAAAACAAAGGATGCA
TGCTGTCTTGGTGGACTTTGAAAAGGCATTCGAAAAAGTTGACCATTCTC
TTCTTCTTTTCAAACTAAATCCTTGGTATGCTTAATGTTGCTTATTTTTC
TGTTCTGAAGTCGAACCAGCAGCCCACGAATTAGATTGTTCCGAAGATGG
TTCCAGAACTTTCTCGGCTGAGACCTATCAATTACTGGGTGctcctaaaa
ttaaaaattattcgAACGCTGGTATAGTTTGCCGTTGTCTTGTGATTGTG
ACGAGTGTAGTGGAAAACGATATTGCAAAATATGGCGACTCTTGGTCTAT
GTTCATCACATACAGCATCATCGCTGAGGAGCCATGCTTTCGTCCACTGA
CACCAGACACTCGTAAAATTCGTTCGTGTTCAATCGCTGTGACCAACAAA
TCGTTGCCTGTTGGCTCTGATCATCTAcctgtttctttttctttcttcga
TCCTACAGCACCCAAAAAAGCTAAGTTTGTTAAACTTTACCATAAACTTA
ACCTTGAGACTGCTGCTAGGATCATCAATTAATTTTCTTGTGACAAAGCT
TT Run BLAST on NCBI transcript from alignment at scaffold_476:228595..229746 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067849 ID=TCONS_00067849|Name=TCONS_00067849|organism=Clytia hemisphaerica|type=transcript|length=1152bp|location=Sequence derived from alignment at scaffold_476:228595..229746 (Clytia hemisphaerica)
AAAGCTTTGTCACAAGAAAATTAATTGATGATCCTAGCAGCAGTCTCAAG
GTTAAGTTTATGGTAAAGTTTAACAAACTTAGCTTTTTTGGGTGCTGTAG
GAtcgaagaaagaaaaagaaacaggTAGATGATCAGAGCCAACAGGCAAC
GATTTGTTGGTCACAGCGATTGAACACGAACGAATTTTACGAGTGTCTGG
TGTCAGTGGACGAAAGCATGGCTCCTCAGCGATGATGCTGTATGTGATGA
ACATAGACCAAGAGTCGCCATATTTTGCAATATCGTTTTCCACTACACTC
GTCACAATCACAAGACAACGGCAAACTATACCAGCGTTcgaataattttt
aattttaggagCACCCAGTAATTGATAGGTCTCAGCCGAGAAAGTTCTGG
AACCATCTTCGGAACAATCTAATTCGTGGGCTGCTGGTTCGACTTCAGAA
CAGAAAAATAAGCAACATTAAGCATACCAAGGATTTAGTTTGAAAAGAAG
AAGAGAATGGTCAACTTTTTCGAATGCCTTTTCAAAGTCCACCAAGACAG
CATGCATCCTTTGTTTTGGCCTCCTGATAATCTTTTTTGAAGTCTATAAA
GACAGCATTCATTCTTCACCTTTGGATTTTTCTACTTGTAAGTAATTTGT
TGAAAGTGGATTGAACATATGATATGGAGAACCTTCCTCTTCAATGGAAT
TGTGTATTTTCAAACCAGTGATTGACCGACTCTTTAGAGGTGTTTGGTTC
GAAAATCTTTTCTTGTCTGTCTTTGACAGAATCAGTAATAtagtttttaa
cttttgttgCATCATCTTTTACAAATACTTTGTCCTTGTGTTGGTTATTA
CTAGACTCACCATCTAAAATGGTCTAGATGTATTTCCAAGTTTTTTGGCA
GTTTCTTTTTCATTAATCCTTTCTTTCACCAATTTAAATCTTTTTATATC
ATTAGCTCAGGTTCAGCCAAGCCAGTTGAATTTGAGTGTCTACTTTAAAA
GCATTTCCCCTGGCTTAAAAATAGTTAACAGTTAAATATTTTCTCTTCAC
TTTCAAGCATTTTTAAGATCATCTCAATCTAGATTATCTCCTACGTTTCC
AACGTTGAGAAAAGCAGAGTGTCGTTCAACGCCAGTCAACTTATAAATCC
TC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067849-exon-scaffold_476-1491911889:228595..229746 | TCONS_00067849-exon-scaffold_476-1491911889:228595..229746 | Clytia hemisphaerica | exon |
| TCONS_00067849-exon-scaffold_476-1510915933:228595..229746 | TCONS_00067849-exon-scaffold_476-1510915933:228595..229746 | Clytia hemisphaerica | exon |
| TCONS_00067849-exon-scaffold_476-1575043694:228595..229746 | TCONS_00067849-exon-scaffold_476-1575043694:228595..229746 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_476 | supercontig | scaffold_476:228595..229746 . |
Blast
The following BLAST results are available for this feature:
|
