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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067893 ID=TCONS_00067893|Name=TCONS_00067893|organism=Clytia hemisphaerica|type=transcript|length=825bp
cccagCCCTCTCAGGGCTAGATTATGGAACATTTGTATTGAAATTCCATG
TTTTGTTCTTACGTTCTGATTCGTCGCTGGTTTCCATAtccaaaatatcc
aaaatatcTTCAAAGCCTGGACTGGAGTTTTGAGAAGAGATATTATCCTT
GTATTGGATAATTTGTTGGGAAGAATAGTTTGAATTTTCAGTATTAGTCG
AGTTCTGCATATCGGGATTATTAATATTGTTGAATGAGTTTTGTTGTGTG
TTTGATTGGTGATTTACATTACCACTGATGCCAAATGTTTGTGCAATGAA
TTGTGGGTCGGTGAATTGCGGGTCTAATGAGTTTATTTGGTTGTATTCAT
TACTAGTGCCGTAATTATCTTGTTGCATATTTGACTGTATAGTGTAGtct
tgttgttgctgttgttgttgttgctctTGTTGGTTGGAAAATACATTTCT
ATTAGAGTCAAATTCATGTATGCAATTCTGATATCCGTTATCCAGTGATG
CGTTTGTAAAAGGTTGATCATTTCCAATTTCATAGTTCTGTCTATTCGTC
TGTATGAAACCATTTTGGTGTTGCTGTGTAGATTGATATTGTTCTGTTTC
AAAGTCACTCACGCTAGATGGATTCAAGTTATTGGGTCGTACGTTTGCAT
TAATATTAAATGAGGGTTCGAACATATGAGAGTTTGTTGGTAGCTGTGCA
TTTAAATGCCCACCATGTGAGTTCTCTGGCATTATTGCTGCTAAGGTCAA
CACAAGTCAACAATttcatccaattttttttcttctttttttgacttttc
tgagtagttttttttttcatttcct Run BLAST on NCBI transcript from alignment at scaffold_477:101198..102472- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067893 ID=TCONS_00067893|Name=TCONS_00067893|organism=Clytia hemisphaerica|type=transcript|length=1275bp|location=Sequence derived from alignment at scaffold_477:101198..102472- (Clytia hemisphaerica)
CCCAGCCCTCTCAGGGCTAGATTATGGAACATTTGTATTGAAATTCCATG
TTTTGTTCTTACGTTCTGATTCGTCGCTGGTTTCCATATCCAAAATATCC
AAAATATCTTCAAAGCCTGGACTGGAGTTTTGAGAAGAGATATTATCCTT
GTATTGGATAATTTGTTGGGAAGAATAGTTTGAATTTTCAGTATTAGGCA
AGTTCTGCATATCGGGATTATCAATCTGGTGGCTCGTTTGATGGGAAAAA
TAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATCGGTATTATCAAT
CTGGTGGCTCGTTTGTTGGGAATAACAGTTTAAATTTTCAGCATTAGTCG
AGTTCTGCATATCGGTATTATCAATCTGGTGGCTCGTTTGATGGGAAAAA
TAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATTAGGATTATCAAT
CGGGTGGCTCGTTTGTTGGGAAAAATAGTTTAAATTTTCAGTATTAGTCG
AGTTCTGCATATCGGTATTATCAATCTGATGGCTCGTTTGTTGGGAAGAA
TAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATTGGGATTATCAAT
CTGATGGCTCGTTTGATGGGAAAAACAGTTTAAATTTTCAGTATTAGTCG
AGTTCTGCATATCGGGATTATTAATATTGTTGAATGAGTTTTGTTGTGTG
TTTGATTGGTGATTTACATTACCACTGATGCCAAATGTTTGTGCAATGAA
TTGTGGGTCGGTGAATTGCGGGTCTAATGAGTTTATTTGGTTGTATTCAT
TACTAGTGCCGTAATTATCTTGTTGCATATTTGACTGTATAGTGTAGTCT
TGTTGTTGCTGTTGTTGTTGTTGCTCTTGTTGGTTGGAAAATACATTTCT
ATTAGAGTCAAATTCATGTATGCAATTCTGATATCCGTTATCCAGTGATG
CGTTTGTAAAAGGTTGATCATTTCCAATTTCATAGTTCTGTCTATTCGTC
TGTATGAAACCATTTTGGTGTTGCTGTGTAGATTGATATTGTTCTGTTTC
AAAGTCACTCACGCTAGATGGATTCAAGTTATTGGGTCGTACGTTTGCAT
TAATATTAAATGAGGGTTCGAACATATGAGAGTTTGTTGGTAGCTGTGCA
TTTAAATGCCCACCATGTGAGTTCTCTGGCATTATTGCTGCTAAGGTCAA
CACAAGTCAACAATTTCATCCAATTTTTTTTCTTCTTTTTTTGACTTTTC
TGAGTAGTTTTTTTTTTCATTTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067893-exon-scaffold_477-1575043694:102276..102472 | TCONS_00067893-exon-scaffold_477-1575043694:102276..102472 | Clytia hemisphaerica | exon |
| TCONS_00067893-exon-scaffold_477-1575043694:101198..101825 | TCONS_00067893-exon-scaffold_477-1575043694:101198..101825 | Clytia hemisphaerica | exon |
| TCONS_00067893-exon-scaffold_477-1510915933:102276..102472 | TCONS_00067893-exon-scaffold_477-1510915933:102276..102472 | Clytia hemisphaerica | exon |
| TCONS_00067893-exon-scaffold_477-1510915933:101198..101825 | TCONS_00067893-exon-scaffold_477-1510915933:101198..101825 | Clytia hemisphaerica | exon |
| TCONS_00067893-exon-scaffold_477-1491911889:102276..102472 | TCONS_00067893-exon-scaffold_477-1491911889:102276..102472 | Clytia hemisphaerica | exon |
| TCONS_00067893-exon-scaffold_477-1491911889:101198..101825 | TCONS_00067893-exon-scaffold_477-1491911889:101198..101825 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_477 | supercontig | scaffold_477:101198..102472 - |
Blast
The following BLAST results are available for this feature:
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