TCONS_00068002 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068002
Unique NameTCONS_00068002
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068002 ID=TCONS_00068002|Name=TCONS_00068002|organism=Clytia hemisphaerica|type=transcript|length=157bp
tttcattatAGTTTGTGCGCAACGGATTTTCAAACAACAATATAAAACac
gAAGCGCGAACACTCTTTCAATTTCGATTCTCTCTAATCAACATCAATGT
TTTAGTAGGACTTTAGCATCAACGTTTTCATTATAGTTTGTGTGCAACGG
ATTTTCA
Run BLAST on NCBI

transcript from alignment at scaffold_478:289526..289807+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068002 ID=TCONS_00068002|Name=TCONS_00068002|organism=Clytia hemisphaerica|type=transcript|length=282bp|location=Sequence derived from alignment at scaffold_478:289526..289807+ (Clytia hemisphaerica)
tttcattatAGTTTGTGCGCAACGGATTTTCAAACAACAATATAAAACAT
GAATCACGAACACTCTTTCAATTTCGATTCTCTCTAATCAACATCAATGT
TTTAGTAGGACTTTAGCCTCAACGTTTTCATTATAGTTTGTGTGCAACGG
ATTttcaaacaacaaaataaaacacgAAGCGCGAACACTCTTTCAATTTC
GATTCTCTCTAATCAACATCAATGTTTTAGTAGGACTTTAGCATCAACGT
TTTCATTATAGTTTGTGTGCAACGGATTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042462XLOC_042462Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068002-exon-scaffold_478-1491911889:289526..289573TCONS_00068002-exon-scaffold_478-1491911889:289526..289573Clytia hemisphaericaexon
TCONS_00068002-exon-scaffold_478-1510915933:289526..289573TCONS_00068002-exon-scaffold_478-1510915933:289526..289573Clytia hemisphaericaexon
TCONS_00068002-exon-scaffold_478-1575043694:289526..289573TCONS_00068002-exon-scaffold_478-1575043694:289526..289573Clytia hemisphaericaexon
TCONS_00068002-exon-scaffold_478-1491911889:289699..289807TCONS_00068002-exon-scaffold_478-1491911889:289699..289807Clytia hemisphaericaexon
TCONS_00068002-exon-scaffold_478-1510915933:289699..289807TCONS_00068002-exon-scaffold_478-1510915933:289699..289807Clytia hemisphaericaexon
TCONS_00068002-exon-scaffold_478-1575043694:289699..289807TCONS_00068002-exon-scaffold_478-1575043694:289699..289807Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:289526..289807 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068002 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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