TCONS_00068017 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068017
Unique NameTCONS_00068017
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1925

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068017 ID=TCONS_00068017|Name=TCONS_00068017|organism=Clytia hemisphaerica|type=transcript|length=1925bp
CAGTTCtttatttcttcgtttttctagagacgattttgaaattgtttttg
tcaaTCTCAAGAATGACCCCAATTTCGCCATATTGAAAGACAACAGCAAA
AATGAATTTACCTATATTCAAGATACTGAAAAATTAGGGATCTGGGAATC
CTTTAATGGACATAAAGATGATATCATTATTTTTGACAAGTCTGGTGTCC
AGAAAGTTCATTTATCAATGAAGAAAGCGAACGGACAGTACGACTATGGT
CAAGTTCATTTGGCAAAGGACGGTGAAGATATTACTTGTGATATTGCTGA
AAAATCATTTGCAATCACACACTTATTGGAAGCGCTGAGTACAGAAGAGA
ACAAAGTGACTTGTGGTCAAATCCAACCACCAATCGTCTCAGAAGAGGAC
GGTGAAGAGGATGGCGAACAGCCACCCACTGTACCTGAAGAGGGTGGGAA
AGAGGGCGAACAACCACCTCCCGTTCCCCCAGTTGTCGAAGGCACGGACA
ATGAGGAAAAACCAAAAGCTGGTAAAAAGGGAGAcaagaaaaaacaacga
aaagaaGAAAGGAAGGAGAAacgagaaaagaaaaaagccgaaaaggagaa
gaaaagattagaaaaagaaGCCGAAAGAAAGAGGAAACAAAAGGAACGAA
AAGCAGAGCGTGAGcagaaaaagcaagaaaaacaagcaGAAAATCAACGA
AAACGCGAAGAGAAACAAGCTgccaaaaaagctaaaaaagaaaaacaggc
TGAAAAACAACGTGAAAGAGAAATAAAACAATCTACTAAAAAGGCCGAAA
AAACAGCGAATAAGGAAGCAAATCAAGCCAAAAAAGAGGAAGCTCGGGCT
GCTAAGGAGGCAGAACGACAACAAAAAGCTGCCGAGAGAAGAGAAGCCAA
ACGTATCGAGAGAGAACGTAGAAAGCAGGAGAGACAAGCAAAGAAAGATG
CACAGGTAGAAAAGAAAGGACAAAGAGAAGCTAGCCGTGCTGCAGAGAAA
GCTAAAAGACAAGCAGCCATGGAGGAAGATAGGATCGCTAGAAAAGAGTT
ACACGACAAATTGAAGGCTGAAGGAAAAAGCAACAAAGAAATCCGCAAGG
AAGTACAAAAACTACGAAGAGAGCAGAACAAGAAACGAAGAGAAGAACGT
AAAACAAAACGCGaagaaaagatgaaaaagaaaaacgaagaagagaatga
aaataaagatgattaaaatcttcgcaaaattttcagatagtAGCTGTGTA
AAATTTATATTGATTATAGTTAATTTAATTGAGAAATTTCATTAGCTTTT
AAAAATTGTAATTTACAAGCCTTTGCTCGAAATTTCAAACTATTTTCTGT
TCAGATGGTTTCGCAAAGCTAAAACAGAACAACAGTTTTTTTGAGGAAAt
gaatcaaaaatctaaaaatcgaAACTTACTTAGTGCTTAAAGTATTTATA
TGTTGTCATTATATTTCTACTTGCTATATGTGGCCGTGTTAGAATTTATT
GGTTATTTCGTATGACAAATTgttaattaaaaacaaaattttcattttgt
aggttacaattttgatgctttttttaagtaaatcttgaaatatatcaata
ttttctaGGTCATATTTTTGCAAGGAGAAGAAGACGAGGAAATAAttgat
caaaaaaaatttgggattaatttatttttcaaaagttcaatcgaaatacc
gttttcccgtcaaaatttttgctgaatcccggaatcccgaagaAATAATA
ACActgtcacaccggtttgtacaggttcaaataccggcataatgacaaaa
aataaggccaaataccgtcaccgtctgattttaaaataccgttttcccgt
cttttttttcgtcaaataccgtaataccgtactaaaaaagggccaatccc
gtcacaccgtaaaagtacaaacccc
Run BLAST on NCBI

protein sequence of TCONS_00068017-protein

>TCONS_00068017-protein ID=TCONS_00068017-protein|Name=TCONS_00068017-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
SSLFLRFSRDDFEIVFVNLKNDPNFAILKDNSKNEFTYIQDTEKLGIWES
FNGHKDDIIIFDKSGVQKVHLSMKKANGQYDYGQVHLAKDGEDITCDIAE
KSFAITHLLEALSTEENKVTCGQIQPPIVSEEDGEEDGEQPPTVPEEGGK
EGEQPPPVPPVVEGTDNEEKPKAGKKGDKKKQRKEERKEKREKKKAEKEK
KRLEKEAERKRKQKERKAEREQKKQEKQAENQRKREEKQAAKKAKKEKQA
EKQREREIKQSTKKAEKTANKEANQAKKEEARAAKEAERQQKAAERREAK
RIERERRKQERQAKKDAQVEKKGQREASRAAEKAKRQAAMEEDRIARKEL
HDKLKAEGKSNKEIRKEVQKLRREQNKKRREERKTKREEKMKKKNEEENE
NKDD
Run BLAST on NCBI

transcript from alignment at scaffold_478:522274..527197+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068017 ID=TCONS_00068017|Name=TCONS_00068017|organism=Clytia hemisphaerica|type=transcript|length=4924bp|location=Sequence derived from alignment at scaffold_478:522274..527197+ (Clytia hemisphaerica)
CAGTTCtttatttcttcgtttttctagagacgattttgaaattgtttttg tcaaTCTCAAGAATGACCCCAATTTCGCCATATTGAAAGACAACAGCAAA AATGAATTTACCTATATTCAAGATACTGAAAAATTAGGGATCTGGGAATC CTTTAATGGACATAAAGATGATATCATTATTTTTGACAAGTCTGGTGTCC AGAAAGTTCATTTATCAATGAAGAAAGCGAACGGACAGTACGACTATGGT CAAGTTCATTTGGCAAAGGACGGTGAAGATATTACTTGTGATATTGCTGA AAAATCATTTGCAATGTAAGGTTATTCGtgatatgcatcactgcaatgtc ttctgacattacatcacggaaccaatcgctcattggttgtaagtgacgta aaatcagtcaatacgtcactttcaaccaatcagctgttgggtggaatgga agacattgcagtgtaaGCTTATACACGTTCTATTTTTTcattaagaacaa actatagtTACtacatataagaacataatgcctagtctgaatcgcagacc tctacaagaCCGTAGGTACTATAGAAGCAAAAATGATAAGAAGCACGAAT TCGTTAGAGGATGCAAGCAGTGTACGTAATGCCTTGATGGCAAAACTATT AAGAACatgttttaagaacatttctaaggctttgcggactcgaaaatacc cgatttcttaagagaAGGCACAAGAATACGGTAAAAAAGACACTTTAAAG GTTTCGTTtttaagagtgatatcgtttgcttactcatcaattttttttaa cttacaagctttttgatactgagttgacacggatgtggagcaagattggt cagaaagaggaaaagaaaaatgttttttgcttatatcagcacaataggCA GACAATgctctgatatgaaatatgtgtccgatatgaaacgggaacactta tttaAAActaaacattttaggcttaaaactcataaAGTagagaacatccg aaggcttgatcaaaagtaaaatttaatCACACAATTTTGAAAGATAAAAG TTTTGATTGTGAAAGAATTTTAAACTTACAGTTCTGTATAATGTAGAGCA ATATTTCATTATTCtccacccagctggcacacaaagttgtttcaacgttt atctaacgttcgcAACATCTATACTAGAACAGTGCTCACATCACTGGATA ACGACCGccttaaatttgatgaagaattcatCGGTTTAGACAATGATCCA CTTTTACACTCTCAGCGATTTTGATGAGCTAGTATATTTTGAGTTgttta atcacttgtggtttgaaTCAGAAGTTAATTAAtactttaagtttttttat ttacttaacatTTATCTCCCTAGCGGGGCACCACAGCATGTTTTTCATCT ATTCATGATTAACATCGTTATCTccgaaaaaatgctttttttatctcCGT AGTAAAACGCCACACATTTCAGAAAACCAGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTGTCTCAGCTG CTCAAACCTTTAACcgacaaaattctgcaaaacgtGCAGAATAGGCATGA ATGGGcgagtcaaattttaaaatattcaaaaggatAGCACATTTGttcca aattttgaatccaacttTTTTACCCGTATACAGCTCGGAAGATTAACCGC CTTCGGCGGTcgataacgttagatgaacgttgaaaaaacattgtgtgcca gctgggctggGAGGGTACAAGGTTTTTGAGGAAAACGAGTATGTCCTTAC TGTCCgtatgtttgagaaaaaaattttggctcgcacatacccatcacctT TTGCCTAAGTATTCAGGTTTTTTTCTCTAATCTGTATAACTTTATTTTCG ATCTCACAGCACACACTTATTGGAAGCGCTGAGTACAGAAGAGAACAAAG TGACTTGTGGTCAAATCCAACCACCAATCGTCTCAGAAGAGGACGGTGAA GAGGATGGCGAACAGCCACCCACTGTACCTGAAGAGGGTGGGAAAGAGGG CGAACAACCACCTCCCGTTCCCCCAGTTGTCGAAGGCACGGACAATGAGG TGAAtacaaatatattttaaattgaTCGATCCTCCTGAATATTTTCAACG TGAAGTTCATCAatggaaacacttatgtaagaataaaacctttaaaaaac ttagaagaGATCGTCCTACTGGGGTTGAGGAAGTTCAGTCCCGAGCCTAA AATCGTGGTCGTTTATAAAATTTATGTATATTATTAGAAACTCTCTAAAA GGGCTTTAAGTTTTGACTGCAAAGACCatgaattctttaaaataaaactC TATACCCTAAAATGCAATTTCCTGTAGATAAAATGTATTCAACTTTAACT TTTCAGGAAAAACCAAAAGCTGGTAAAAAGGGAGAcaagaaaaaacaacg aaaagaaGAAAGGAAGGAGAAacgagaaaagaaaaaagccgaaaaggaga agaaaagattagaaaaagaaGCCGAAAGAAAGAGGAAACAAAAGGAACGA AAAGCAGAGCGTGAGcagaaaaagcaagaaaaacaagcaGAAAATCAACG AAAACGCGAAGAGAAACAAGCTgccaaaaaagctaaaaaagaaaaacagg cTGAAAAACAACGTGAAAGAGAAATAAAACAATCTACTAAAAAGGCCGAA AAAACAGCGAATAAGGAAGCAAATCAAGCCAAAAAAGAGGAAGCTCGGGC TGCTAAGGAGGCAGAACGACAACAAAAAGCTGCCGAGAGAAGAGAAGCCA AACGTATCGAGAGAGAACGTAGAAAGCAGGAGAGACAAGCAAAGAAAGAT GCACAGGTAGAAAAGAAAGGACAAAGAGAAGCTAGCCGTGCTGCAGAGAA AGCTAAAAGACAAGCAGCCATGGAGGAAGATAGGTAGGAGATTTAGTCTG TATAAATTTGTGATCGAAAATGAGCCCAATCGAGTAGATTATTCGCGATC AAAAACTGAGCGAATCTATTTTTTATTAGACAGGAAAAGAGTTAACAAAA ACACTTCATAGTAGGCTTTTACAccgagttttttttataaagacaggtta aaacttttcaatattaataagGAGTTGACTCTTCGAAACTCGAACTTCCA TCCTTGAGAGAAAATAGGTTGCATCCTCGAACTCTATATATAAGTAGAAC GATCACTGATCCGGACCATGGCTTGACAGTAGCCTTTAGGTGCCCCCCCT TAAGACTtgaggtgacccctaagatttagttAAGTcctatttgaaaaata ttttaggtgactCCTATAAAAGCTTATTGCACAATTTTTTTAGATATAGT TAAGCACATACACACTTTTTCAGACAGAAGAAACCCCATCATAGTGAAGT TTATAATGAAGcaaaaagcaagttaagaaaaaatcaccaaacatagaatc tagccgccaggtccatctgaaaaaatttaggtgacccccAAGATTGTTAG TCCCCTAGCCATAGGCTAAAATGAGGTACCAGTTGCTGCGGTACCTTTTA GCTCTCCCCCCTCTCAGGGGTTCCAGCCACACCACCTTTACATTCGATTT AAGGCCCATCAATTTAAGTGCAGCAAAATATTAATTAGCCGGGttaacca agccagtttttacaagGCCAGATACGGCTGACGGCAATATAGAGTTATCG gtgctttaatgatttttacgATGCacggaattttaagtttgccttgaaaa aaactgatattcagtcacaacttaccatcagattttaccaAGTGACTGAC TCAATCTGGCTTCGATTTCTAGGCTAAGTATTAAGTGAATCTTACCCAAA ACTCAGCAGCACACTCTGTTTAACCACAAGCGTAGTTATCCTCCAGATTG ATAAATAAATTTCCTATGTTTTTCTTTCCAGGATCGCTAGAAAAGAGTTA CACGACAAATTGAAGGCTGAAGGAAAAAGCAACAAAGAAATCCGCAAGGA AGTACAAAAACTACGAAGAGAGCAGAACAAGAAACGAAGAGAAGAACGTA AAACAAAACGCGaagaaaagatgaaaaagaaaaacgaagaagagaatgaa aataaagatgattaaaatcttcgcaaaattttcagatagtAGCTGTGTAA AATTTATATTGATTATAGTTAATTTAATTGAGAAATTTCATTAGCTTTTA AAAATTGTAATTTACAAGCCTTTGCTCGAAATTTCAAACTATTTTCTGTT CAGATGGTTTCGCAAAGCTAAAACAGAACAACAGTTTTTTTGAGGAAAtg aatcaaaaatctaaaaatcgaAACTTACTTAGTGCTTAAAGTATTTATAT GTTGTCATTATATTTCTACTTGCTATATGTGGCCGTGTTAGAATTTATTG GTTATTTCGTATGACAAATTgttaattaaaaacaaaattttcattttgta ggttacaattttgatgctttttttaagtaaatcttgaaatatatcaatat tttctaGGTCATATTTTTGCAAGGAGAAGAAGACGAGGAAATAAttgatc aaaaaaaatttgggattaatttatttttcaaaagttcaatcgaaataccg ttttcccgtcaaaatttttgctgaatcccggaatcccgaagaAATAATAA CActgtcacaccggtttgtacaggttcaaataccggcataatgacaaaaa ataaggccaaataccgtcaccgtctgattttaaaataccgttttcccgtc ttttttttcgtcaaataccgtaataccgtactaaaaaagggccaatcccg tcacaccgtaaaagtacaaacccc

Coding sequence (CDS) from alignment at scaffold_478:522274..527197+

>TCONS_00068017 ID=TCONS_00068017|Name=TCONS_00068017|organism=Clytia hemisphaerica|type=CDS|length=4860bp|location=Sequence derived from alignment at scaffold_478:522274..527197+ (Clytia hemisphaerica)
AGTTCtttatttcttcgtttttctagagacgattttgaaattgtttttgt
caaTCTCAAGAATGACCCCAATTTCGCCATATTGAAAGACAACAGCAAAA
ATGAATTTACCTATATTCAAGATACTGAAAAATTAGGGATCTGGGAATCC
TTTAATGGACATAAAGATGATATCATTATTTTTGACAAGTCTGGTGTCCA
GAAAGTTCATTTATCAATGAAGAAAGCGAACGGACAGTACGACTATGGTC
AAGTTCATTTGGCAAAGGACGGTGAAGATATTACTTGTGATATTGCTGAA
AAATCATTTGCAATCACACACTTATTGGAAGCGCTGAGTACAGAAGAGAA
CAAAGTGACTTGTGGTCAAATCCAACCACCAATCGTCTCAGAAGAGGACG
GTGAAGAGGATGGCGAACAGCCACCCACTGTACCTGAAGAGGGTGGGAAA
GAGGGCGAACAACCACCTCCCGTTCCCCCAGTTGTCGAAGGCACGGACAA
TGAGGAAAAACCAAAAGCTGGTAAAAAGGGAGAcaagaaaaaacaacgaa
aagaaGAAAGGAAGGAGAAacgagaaaagaaaaaagccgaaaaggagaag
aaaagattagaaaaagaaGCCGAAAGAAAGAGGAAACAAAAGGAACGAAA
AGCAGAGCGTGAGcagaaaaagcaagaaaaacaagcaGAAAATCAACGAA
AACGCGAAGAGAAACAAGCTgccaaaaaagctaaaaaagaaaaacaggcT
GAAAAACAACGTGAAAGAGAAATAAAACAATCTACTAAAAAGGCCGAAAA
AACAGCGAATAAGGAAGCAAATCAAGCCAAAAAAGAGGAAGCTCGGGCTG
CTAAGGAGGCAGAACGACAACAAAAAGCTGCCGAGAGAAGAGAAGCCAAA
CGTATCGAGAGAGAACGTAGAAAGCAGGAGAGACAAGCAAAGAAAGATGC
ACAGGTAGAAAAGAAAGGACAAAGAGAAGCTAGCCGTGCTGCAGAGAAAG
CTAAAAGACAAGCAGCCATGGAGGAAGATAGGATCGCTAGAAAAGAGTTA
CACGACAAATTGAAGGCTGAAGGAAAAAGCAACAAAGAAATCCGCAAGGA
AGTACAAAAACTACGAAGAGAGCAGAACAAGAAACGAAGAGAAGAACGTA
AAACAAAACGCGaagaaaagatgaaaaagaaaaacgaagaagagaatgaa
aataaagatgattaaAGTTCtttatttcttcgtttttctagagacgattt
tgaaattgtttttgtcaaTCTCAAGAATGACCCCAATTTCGCCATATTGA
AAGACAACAGCAAAAATGAATTTACCTATATTCAAGATACTGAAAAATTA
GGGATCTGGGAATCCTTTAATGGACATAAAGATGATATCATTATTTTTGA
CAAGTCTGGTGTCCAGAAAGTTCATTTATCAATGAAGAAAGCGAACGGAC
AGTACGACTATGGTCAAGTTCATTTGGCAAAGGACGGTGAAGATATTACT
TGTGATATTGCTGAAAAATCATTTGCAATCACACACTTATTGGAAGCGCT
GAGTACAGAAGAGAACAAAGTGACTTGTGGTCAAATCCAACCACCAATCG
TCTCAGAAGAGGACGGTGAAGAGGATGGCGAACAGCCACCCACTGTACCT
GAAGAGGGTGGGAAAGAGGGCGAACAACCACCTCCCGTTCCCCCAGTTGT
CGAAGGCACGGACAATGAGGAAAAACCAAAAGCTGGTAAAAAGGGAGAca
agaaaaaacaacgaaaagaaGAAAGGAAGGAGAAacgagaaaagaaaaaa
gccgaaaaggagaagaaaagattagaaaaagaaGCCGAAAGAAAGAGGAA
ACAAAAGGAACGAAAAGCAGAGCGTGAGcagaaaaagcaagaaaaacaag
caGAAAATCAACGAAAACGCGAAGAGAAACAAGCTgccaaaaaagctaaa
aaagaaaaacaggcTGAAAAACAACGTGAAAGAGAAATAAAACAATCTAC
TAAAAAGGCCGAAAAAACAGCGAATAAGGAAGCAAATCAAGCCAAAAAAG
AGGAAGCTCGGGCTGCTAAGGAGGCAGAACGACAACAAAAAGCTGCCGAG
AGAAGAGAAGCCAAACGTATCGAGAGAGAACGTAGAAAGCAGGAGAGACA
AGCAAAGAAAGATGCACAGGTAGAAAAGAAAGGACAAAGAGAAGCTAGCC
GTGCTGCAGAGAAAGCTAAAAGACAAGCAGCCATGGAGGAAGATAGGATC
GCTAGAAAAGAGTTACACGACAAATTGAAGGCTGAAGGAAAAAGCAACAA
AGAAATCCGCAAGGAAGTACAAAAACTACGAAGAGAGCAGAACAAGAAAC
GAAGAGAAGAACGTAAAACAAAACGCGaagaaaagatgaaaaagaaaaac
gaagaagagaatgaaaataaagatgattaaAGTTCtttatttcttcgttt
ttctagagacgattttgaaattgtttttgtcaaTCTCAAGAATGACCCCA
ATTTCGCCATATTGAAAGACAACAGCAAAAATGAATTTACCTATATTCAA
GATACTGAAAAATTAGGGATCTGGGAATCCTTTAATGGACATAAAGATGA
TATCATTATTTTTGACAAGTCTGGTGTCCAGAAAGTTCATTTATCAATGA
AGAAAGCGAACGGACAGTACGACTATGGTCAAGTTCATTTGGCAAAGGAC
GGTGAAGATATTACTTGTGATATTGCTGAAAAATCATTTGCAATCACACA
CTTATTGGAAGCGCTGAGTACAGAAGAGAACAAAGTGACTTGTGGTCAAA
TCCAACCACCAATCGTCTCAGAAGAGGACGGTGAAGAGGATGGCGAACAG
CCACCCACTGTACCTGAAGAGGGTGGGAAAGAGGGCGAACAACCACCTCC
CGTTCCCCCAGTTGTCGAAGGCACGGACAATGAGGAAAAACCAAAAGCTG
GTAAAAAGGGAGAcaagaaaaaacaacgaaaagaaGAAAGGAAGGAGAAa
cgagaaaagaaaaaagccgaaaaggagaagaaaagattagaaaaagaaGC
CGAAAGAAAGAGGAAACAAAAGGAACGAAAAGCAGAGCGTGAGcagaaaa
agcaagaaaaacaagcaGAAAATCAACGAAAACGCGAAGAGAAACAAGCT
gccaaaaaagctaaaaaagaaaaacaggcTGAAAAACAACGTGAAAGAGA
AATAAAACAATCTACTAAAAAGGCCGAAAAAACAGCGAATAAGGAAGCAA
ATCAAGCCAAAAAAGAGGAAGCTCGGGCTGCTAAGGAGGCAGAACGACAA
CAAAAAGCTGCCGAGAGAAGAGAAGCCAAACGTATCGAGAGAGAACGTAG
AAAGCAGGAGAGACAAGCAAAGAAAGATGCACAGGTAGAAAAGAAAGGAC
AAAGAGAAGCTAGCCGTGCTGCAGAGAAAGCTAAAAGACAAGCAGCCATG
GAGGAAGATAGGATCGCTAGAAAAGAGTTACACGACAAATTGAAGGCTGA
AGGAAAAAGCAACAAAGAAATCCGCAAGGAAGTACAAAAACTACGAAGAG
AGCAGAACAAGAAACGAAGAGAAGAACGTAAAACAAAACGCGaagaaaag
atgaaaaagaaaaacgaagaagagaatgaaaataaagatgattaaAGTTC
tttatttcttcgtttttctagagacgattttgaaattgtttttgtcaaTC
TCAAGAATGACCCCAATTTCGCCATATTGAAAGACAACAGCAAAAATGAA
TTTACCTATATTCAAGATACTGAAAAATTAGGGATCTGGGAATCCTTTAA
TGGACATAAAGATGATATCATTATTTTTGACAAGTCTGGTGTCCAGAAAG
TTCATTTATCAATGAAGAAAGCGAACGGACAGTACGACTATGGTCAAGTT
CATTTGGCAAAGGACGGTGAAGATATTACTTGTGATATTGCTGAAAAATC
ATTTGCAATCACACACTTATTGGAAGCGCTGAGTACAGAAGAGAACAAAG
TGACTTGTGGTCAAATCCAACCACCAATCGTCTCAGAAGAGGACGGTGAA
GAGGATGGCGAACAGCCACCCACTGTACCTGAAGAGGGTGGGAAAGAGGG
CGAACAACCACCTCCCGTTCCCCCAGTTGTCGAAGGCACGGACAATGAGG
AAAAACCAAAAGCTGGTAAAAAGGGAGAcaagaaaaaacaacgaaaagaa
GAAAGGAAGGAGAAacgagaaaagaaaaaagccgaaaaggagaagaaaag
attagaaaaagaaGCCGAAAGAAAGAGGAAACAAAAGGAACGAAAAGCAG
AGCGTGAGcagaaaaagcaagaaaaacaagcaGAAAATCAACGAAAACGC
GAAGAGAAACAAGCTgccaaaaaagctaaaaaagaaaaacaggcTGAAAA
ACAACGTGAAAGAGAAATAAAACAATCTACTAAAAAGGCCGAAAAAACAG
CGAATAAGGAAGCAAATCAAGCCAAAAAAGAGGAAGCTCGGGCTGCTAAG
GAGGCAGAACGACAACAAAAAGCTGCCGAGAGAAGAGAAGCCAAACGTAT
CGAGAGAGAACGTAGAAAGCAGGAGAGACAAGCAAAGAAAGATGCACAGG
TAGAAAAGAAAGGACAAAGAGAAGCTAGCCGTGCTGCAGAGAAAGCTAAA
AGACAAGCAGCCATGGAGGAAGATAGGATCGCTAGAAAAGAGTTACACGA
CAAATTGAAGGCTGAAGGAAAAAGCAACAAAGAAATCCGCAAGGAAGTAC
AAAAACTACGAAGAGAGCAGAACAAGAAACGAAGAGAAGAACGTAAAACA
AAACGCGaagaaaagatgaaaaagaaaaacgaagaagagaatgaaaataa
agatgattaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042466XLOC_042466Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068017-exon-scaffold_478-1491911889:522274..522588TCONS_00068017-exon-scaffold_478-1491911889:522274..522588Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1510915933:522274..522588TCONS_00068017-exon-scaffold_478-1510915933:522274..522588Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1575043694:522274..522588TCONS_00068017-exon-scaffold_478-1575043694:522274..522588Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1491911889:524283..524472TCONS_00068017-exon-scaffold_478-1491911889:524283..524472Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1510915933:524283..524472TCONS_00068017-exon-scaffold_478-1510915933:524283..524472Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1575043694:524283..524472TCONS_00068017-exon-scaffold_478-1575043694:524283..524472Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1491911889:524780..525306TCONS_00068017-exon-scaffold_478-1491911889:524780..525306Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1510915933:524780..525306TCONS_00068017-exon-scaffold_478-1510915933:524780..525306Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1575043694:524780..525306TCONS_00068017-exon-scaffold_478-1575043694:524780..525306Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1491911889:526305..527197TCONS_00068017-exon-scaffold_478-1491911889:526305..527197Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1510915933:526305..527197TCONS_00068017-exon-scaffold_478-1510915933:526305..527197Clytia hemisphaericaexon
TCONS_00068017-exon-scaffold_478-1575043694:526305..527197TCONS_00068017-exon-scaffold_478-1575043694:526305..527197Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068017-proteinTCONS_00068017-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:522274..527197 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.197016 0.316559 0.608273 0.723315 1.34933 1.26265 54.3465 62.7753 88.4036 48.6768 51.4705 94.4271 75.3047 84.4028 140.731 131.678 116.089 147.354 106.065 91.9152 193.618 185.635 144.754 164.6 300.932 232.932 37.5081 79.8232 567.82 603.981
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068017 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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