TCONS_00068045 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068045
Unique NameTCONS_00068045
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1062

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068045 ID=TCONS_00068045|Name=TCONS_00068045|organism=Clytia hemisphaerica|type=transcript|length=1062bp
CTTAGACTGtaagaaagtaaacaaaaataagataaaagaAAGGACTTTAC
GCAATGACTGATGTAAAACAACCCATTTTGCCATCTAAATGTTCACCACG
TGGGCGTGGGCGGATGATGAGTAGAGGGTGGTTGGAAGATTTCAAACCGA
ATCCGCCCCCTTTCACGGTAGAGGAATTATCTAAATCATTGAGCGAATAC
TCGGACAGTATCAAAGATTACGCCTCTAGTAAAAATCAAACCATCAACAC
CATTATTCCAAACACTACACCATATGATGAAAAACCACCCACTCAGAGCA
TTCAAGGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTC
AACGCCAACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGA
AGATGAGGCAAGCATACCAGATGAAAAACCAGCTCTCCATAGGACCAACA
GTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTCCGATCATTCC
GATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTATGACGTTAAC
AGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATCTCACCGTCGC
TGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTATAAGAATCATT
TTCGACCATGCAACGAACAATACGAACTTTTGTTACACGGCCGCTCGGTT
CTTCGAATATTTTGATCGAAAGAAAACGTTCGGGGAAGCGagtaatttca
gaaaaatcttCTATACAAAATGTCAATCAGAATTCAAATGGTTGTCCGAA
ATTACATCGGGATCGTCCGAAATTACATCGGGATCGTCCGAAAGTCGACC
TTCAGCAAGTGATTACACCAAAATGACCAACATCGCTTTTTTCTTTGGAG
AACTCTTTAATAATATGAAGgtCCAAGACAAACCAAATGCAATTTTCAAG
AAATGTGTTTTCGATATNcgacggagcccgattttcgataaaaaaaattt
ttaggcaaatttgggccgaaaaacggctaaaaaacaggttttttggactt
tgtgaaaaattg
Run BLAST on NCBI

protein sequence of TCONS_00068045-protein

>TCONS_00068045-protein ID=TCONS_00068045-protein|Name=TCONS_00068045-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MTDVKQPILPSKCSPRGRGRMMSRGWLEDFKPNPPPFTVEELSKSLSEYS
DSIKDYASSKNQTINTIIPNTTPYDEKPPTQSIQGDTSKTFRNILQKAVN
ANVFVPTAFNIPSYSEDEASIPDEKPALHRTNSNSSSPRDFLRQLSDHSD
DEKAEIFLQDYIMTLTENPGEFQSIIREISPSLSELKSEESVKAIIRIIF
DHATNNTNFCYTAARFFEYFDRKKTFGEASNFRKIFYTKCQSEFKWLSEI
TSGSSEITSGSSESRPSASDYTKMTNIAFFFGELFNNMKVQDKPNAIFKK
CVFDXRRSPIFDKKNF
Run BLAST on NCBI

transcript from alignment at scaffold_478:587026..595928-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068045 ID=TCONS_00068045|Name=TCONS_00068045|organism=Clytia hemisphaerica|type=transcript|length=8903bp|location=Sequence derived from alignment at scaffold_478:587026..595928- (Clytia hemisphaerica)
CTTAGACTGTAAGAAAGTAAACAAAAATAAGATAAAAGAAAGGACTTTAC
GCAATGACTGATGTAAAACAACCCATTTTGCCATCTAAATGTTCACCACG
TGGGCGTGGGCGGATGATGAGTAGAGGGTGGTTGGAAGATTTCAAACCGA
ATCCGCCCCCTTTCACGGTAGAGGAATTATGTAAGTTTTTTTTGTTCATT
ATTTTGACATGTAGCACACAATGTTGTCTGGACATGTGTTCTTATCTGTG
CCTCCTAACCTTTCTCAAACGAGAACTTCGGTTTTTTCGTCTTATGGCTG
GCAAAATATCCTTTTGTCGTTGCTAAAAGAAACGTAGAGCAGAATACTTA
CCAGAAAATCTAATTTCACTGAAAATTATTAATTAGTCATGTTGTTAACG
CGAATCGAGCCGTTCTGTTGATTAAAACCATCTAACAATATTTGAGCCAT
TGTAATTTTCAAAAACCCTACCTTTTGCGTTAATAAATTGTGTTACTTTT
TGTACCCGCACTAAATACCTGAGTCTTTTTGCCAAATCTACTTTTGGTTT
TAACTCTTCTAGAGTTTTCTACGAGTTCAGACTTTATCTCACTTCCCTAA
CATAAAGTTATAAAAAAACTTCAAAAAACTCTTTCTAATTCGAACCTCTA
TGATTCGAATCTCTATGATTCGAATCTTTCCGTAATTCTTCTCGTATTGA
GTCCAATCTCCTTCTGACGTGAAAAACTTTACTTTGACTTTCTTCAGCTA
AATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTCTAGTAAA
AATCAAACCATCAACACCATTATTCCAAACACTACACCATATGATGAAAA
ACCACCCACTCAGAGCATTCAAGGTTTGTCAGGTTTTTATAAATACAGTT
GACGCTCTTTAAATTCGGTTTTTAAGGGAAATCGGATATTATCGAATAAT
GGAGTATATCGAATAGTAGAGCGTCGTTTATGAAAGTTTCTTGTTGATGG
TGACTTTCAATATTATCGAAGAAGGGAGTGTATCGAACAGTTGATTGTCG
TTTATGAGAATTTTTTGTTGACGGTGACTTTCAATATTATCGAATAATGG
AGCGTATCGAATAGTAGAGCGTCGTTTATGAGAGTTTTTTGTTGACGGTG
ACTTTCAATATTATCCAATAATGGCGCGTATCGAATAGTAGAGCGTCCTT
TATGAGAGTTTTTTGTTGACGGTGACTTTCAATATTATCGAATAATGGAG
CGTATCGAATAGTAGAGCGTCCTTTATGAGAGTTTTTTGTTGACAGTGAC
TTTCAATAATTATTGAATAATGGAGCGTATCGAATAGTAGAGTGTCGTTT
ATGAGAGTTTCTTGTTGACGGTGACTTTCAATATTATCGAATAATGGAGC
GTATCGAATAGTAGAGCGTCGTTTATGAGAGTCTTTTGTTGACGGTGACT
TTCAATAATTATTGAATAATGGAGCGTATCGAATAGTAGAGTGTCGTTTA
TGAGAGTTTCTTGTTGACGGTGACTTTCAATATTATCGAATAATGGAGCG
TATCGAATAGTAGAGCGTCGTTTATGAGAGTCTTTTGTTGACGGTGACTT
TCAATAATTATTGAATAATGGAGCGTATCGAATAGTAGAGCGTCGTTTAT
GAGAGTTTTTTGTTGACGGTGACTTTCAATATTATCGAATAATGGAGCGT
ATCGAATAGTAGAGTGTCATTTATGAGAGTTTCTTGTTGACGGTGACTTT
CAATACTATCGAATAATGGAGCGTATCGAATATTAGCATCGAATTATTAA
AGAGCATCAACTGTAGTTAGCGCTCTTTTTTGATTCCACATAAGTTGAAC
GAAAGATAAAAAAATTCTCCATTAGGATCATACGGTAAATGTGCACATTC
TTTGGCAAACGAGTTTTGTTTGATTGATATTTCGATCGTGCAAATTGCGC
AGTATCATAGCAGAGAAATAATTCGAAATCACTGTATTGAATTTGCCCCA
TCTTGCGCAAAAGTATTGTACATTTCAAGCCCTTCACTTAATCAGGAAGT
TCAGACAGTTAATCAGTGTCTCTGGATACTGAAAAATCTGAAGTTCGTTT
CTGTCTGAGACAAGAATCCTTGCTTTGATCATTGTTTGATGTTATTCGTT
TATACGACACAGGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAA
GCAGTCAACGCCAACGTGTTCGTACCAACGGCTTTCAATATACCATCCTA
CTCTGAAGATGAGGCAAGCATACCAGATGAAAAACCAGCTCTCCATAGGT
ATCTATTCATTCCTCTTCATTTTTTGTCAGATCTATCAAATTCCGTTTTT
TTTTAGCTTTTTTAAAAAAAGTAGGGACTTAGGGGTGCCGAGTTTTATAC
ATTAAATCTGCATTGTATAGATCATTTTTTGTGACCTTAGCCAATAGTAG
ACGTATACACGGCTTTACGCAGCAACGTTTATTCCACTTTGCGACTTTTT
CCATTGTAATTTTCGATGGGTTCTTCCAGAAAAATACTACCCATGTTGTT
GAGGATGTTTTTCTTCTGTTCAGGNGCTCTTCATTTTTTCAAAGATCTAT
CAAATTCCGTTTTTTTTAGCTTTTTTAAAAAAAGTAGGGACTTAGGGGTG
CCGAGTTTTATACATTAAATCTGCATTGTATAGAACATTCTTTGTGACCT
TAGCCAATAGTAGACGTATACACGGCTCTACGAAGCAACTTCTATTCACT
TCTATTTGCGACTTTTTCTAATGTATGCCCCTTTCCTTTGTAATTTTTGA
TGGGTTCTTCCAGAAAAATACTACCCATGTTGTTGAGGATGTTTTTCTTC
TGTTCAGGGGTACCCTCGACAAACCTAAATAAATACAGTCAATATAATCA
ATAAAAATTTTGAAAATCTAGGGGAAGTCTCCAAAGTTGGTCCAAGGAGG
CATATCAAAATTAACTAAAAATCCACGGGGGTTTCTAAAATCTAGTTCAG
GGGGTCACTTTTTTTGATAGCGTAGTAGTACCGAAATCATCACAATACCT
TCCTGTGAAATTTATACGTGAGGCTCACTAAAGCTCATTTTATATAAATC
CTGGAAACAGCTTCCCAATCCTGGCCAAGCAAAATCTTTGATCGTAGTTT
TTTTGAAAAGTGGTAGCCTAAAGGTTTTTGATCGAATACTTGTGATGATG
TAGTTCCTTTTATTGGAGTTAATTCAACACTTCAATGGCTTTTCTTCGAA
TACCACTTCCAAAGAACTCCCATCAAAAATAGAGAACATAGCTCAGTCCA
GGATGTCTGAGGCTAATCTAAGGCTAATCTAAGGCATGTCTTTTTCTCAC
CAGGACCAACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGT
CCGATCATTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATT
ATGACGTTAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGAT
CTCACCGTCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTA
TAAGAATCATTTTCGACCATGTAAGTTTTCTGGAAAGCATCTCTTAAGTG
ATATCACACAGCTAGTTCCCTCCAGATCAATATTTAGGTCCCCTCTTGTT
CGACATTCTAATCATTAACCTTCACCTGTTTTTAATGAATGGACGCATTA
CTTTATGCCAAAACAAAATAAACAAATGTAGTTTTTGATTCTCGCGAGGC
AGGAAGGGTAATTTCTTTTGTATAATAAATGCTGTGGCAACGAATGTTAG
TTGGCCCAGCGCTAGCGATAGGGCCTTTCATTTGCAACTTTCCGTCCGTT
GCGTCCTTTCGCTGTCTGTCCGTCCGTTTTGGTAGAAACGGCGCTTGAAA
CTATAGTAACACACTTTTTAATTTTGCCGTTTGGAGAGGGAAAAGGTTGC
TAAAGTCGGNTGTCGTTTATAAAAGTTTCTTGTTGACGGTGACTTTCAAT
ATTATCGAATAAGGGAGCGTATCGAATAATAGAGCGTCGTTTATGAGAGT
TTCTTGTTGACGTGGACTTTCAATATTATCGAATAATGGAGCGTATCGAA
TAGTAGAGCGTCGTTTATTAGAGTTTCTTGTTGACGGTGACTTTCAATAT
TTTCGAATAATGGAGCGTATTGAATATTAGCATCGAATTATTAAAGAGCA
TCAACTGTAGTTAGCGCTCTTTTTTGATTCCACATAAGTTGAACGAAAGA
TAAAAAAATTCTCCATTAGGATCATACGGTAAATGTGCACATTCTTTGGC
AAACGAGTTTTGTTTGATTGATATTTCGATCGTGCAAATTGCGCAGTATC
ATAGCAGAGAAATAATTCGAAATCACTGTATTGAATTTGCCCCATCTTGC
GCAAAAGTATTGTACATTTCAAGCCCTTCACTTAATCAGGAAGTTCAGAC
AGTTAATCAGTGTCTCTGGATACTGAAAAATCTGAAGTTCGTTTCTGTCT
GAGACAAGAATCCTTGCTTTGATCATTGTTTGATGTTATTCGTTTATACG
ACACAGGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTC
AACGCCAACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGA
AGATGAGGCAAGCATACCAGATGAAAAACCAGCTCTCCATAGGTATCTAT
TCATTGCTCTTCATTTTTTCAAAGATCTATCAAATTCCGTTTTTTTTAGC
TTTTTTAAAAAAAGTAGGGACTTAGGGGTGCCGAGTTTTATACATTAAAT
CTGCATTGTATAGAACATTCTTTGTGACCTTAGCCAATAGTAGACGTATA
CACGGCTCTACGAAGCAACTTCTATTCACTTCTATTTGCGACTTTTTCTA
ATGTATGCCCCTTTCCTTTGTAATTTTTGATGGGTTCTTCCAGAAAAATA
CTACCCATGTTGTTGAGGATGTTTTTCTTCTGTTCAGGGGTACCCTCGAC
AAACCTAAATAAATACAGTCAATATAATCAATAAAAATTTTGAAAATCTA
GGGGAAGTCTCCAAAGTTGGTCCAAGGAGGCATATCAAAATTAACTAAAA
ATCCACGGGGGTTTCTAAAATCTAGTTCAGGGGGTCACTTTTTTTGATAG
CGTAGTAGTACCGAAATCATCACAATACCTTCCTGTGAAATTTATACGTG
AGGCTCACTAAAGCTCATTTTATATAAATCCTGGAAACAGCTTCCCAATC
CTGGCCAAGCAAAATCTTTGATCGTAGTTTTTTTGAAAAGTGGCAGCCTA
AAGGTTTTTGATCGAATACTTGTGATGATGTAGTTCCTTTTATTGGAGTT
AATTCAACACTTCAATGGCTTTTCTTCGAATACCACTTCCAAAGAACTCC
CATCAAAAATAGAGAACATAGCTCAGTCCAGGATGTCTGAGGCTAATCTA
AGGCTAATCTAAGGCATGTCTTTTTCTCACCAGGACCAACAGTAACAGCA
GTTCACCTCGTGATTTTCTCCGACAACTGTCCGATCATTCCGATGATGAA
AAAGCCGAAATCTTCCTACAAGATTACATTATGACGTTAACAGAAAACCC
TGGGGAATTCCAAAGTATCATAAGGGAGATCTCACCGTCGCTGTCAGAAT
TGAAATCAGAAGAATCGGTTAAAGCTATTATAAGAATCATTTTCGACCAT
GTAAGTTTTCTGGAAAGCATCTCTTAAGTGATATCACACAGCTAGTTCCC
TCCAGATCAATATTTAGGTCCCCTCTTGTTCGACATTCTAATCATTAACC
TTCACCTGTTTTTAATGAATGGACGCATTACTTTATGCCAAAACAAAATA
AACAAATGTAATTTTTGATTCTCGCGAGGCAGGAAGGGTAATTTCTTTTG
TATAATAAATGATGTGGCAACGAATGGTAGTTGACTCTTTAAATGATGTC
CTTAAAGGCCCGACTTTGTGTGAGTTTTTGAAAACATTGGTAACGTTCTC
TTGTTTTTTTATTCGCCTGATTTCATTTTCAAATATCAAAAAATTGTGTC
CATAGAAATAAAGTCCCCACTCTGACAGTACTTTTCAAACGTCTGGCTTT
GAAAATAATTTTTTTCATATTTCTTCCAGGCAACGAACAATACGAACTTT
TGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCGAAAGAAAACGTT
CGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAAAGTAAGTAGTTT
TCTTTTTACTCGACTCGCCTGCGTCAAAAGAAACCATCAGATTTTTTTGA
ATTGGCTCTTTAGCTTTGATATCATTTAATTCGCACCAGAAAAATATCAA
TCAAATAAAAGGGATAGTAACTGAAAATGCTCTATAAAATAGTTCTTCTT
TTTATCCCTTTCAAAACCAAATTTTTCGTTGAAAAAATACTTTTCTTTTC
CAGCTTCAATAAAAGGAATAAGATTATACAAATATCTGGTCACTGTAATG
CTTTGTTTTAAAATGTAATGATCCGTGAACTACCTGACAGAAGAAATAGA
AAAAGAGTTCGAGATGCCAATCAAAAATAAACCCCTGTTTTGTGACATTT
TTTACTGTCCGCCACTAAATTGACCATAACTTGGGAAAATTATGTGGCAT
ACGATTGCTTTAATGGTTAAGCTGAGGAAATTAACTATCCATTGCATAAA
GGGCGAATTTTTGTGGCTTACTTAAAGGGGAGTTACAAGCAAATGAAGTG
TGGGGAAAAAATGTGGCTTACTGGTCATATGGCTTACCCTACCAAGAAAT
TTTGAAGACTGCGTTCTCAATAATGGAAACAGTCAGAAATATACTTTCTC
TTCAGCATTGACAGCAAAGGGCTAAATTTTTCATTAGCTGCACTGATTTG
TGGCTTACAGTTTGTTAAGTGGGCAAAAATGATAGTTGAAATATAGGTGA
AATTTTATGTCTCACATTTTTTAAGTTTTTGGCACTCAATCATTAAAGTA
TAACACCTGTAGGTGTAAAAAATCACAAAAATTTTGTTGTAAGTACAATT
TTGTGGCTTACAAAGTCACATTAAAAATTATCGAAAAGTAAGCCACAAAA
AACTACATTTAACAGCTAGAAAGTATGTACATTTAACATTTTTTGAAAAA
TTCAACCTTTCCTCTGTCAAGTTAAGAAAGTCCCATTCTAAGATCTCTTA
TCTAATTTGTGTGGCTTACATTTCTAAAAAAGATACAAATTTTGAGTTTA
AGCCACATTTTTAGCTCAATTAACGAATTTTATTTATAATGTCTTAGTAT
TTCCCACAACATTGTAAAATTTCAAGACTTATCGATTAAGACTTCGTCAG
CTATGACAAAAAGTTGTTTTGGGGCATTTTTCAAAATTTCACACTATTTT
TGATTGGGATCTCGAATAGCTAGCGGCGCGGCCTATTTTTGCTTTTTATA
CTTGATTTTTTTCCTGTGCATTGCGGTTTTATCTCGAAAGTCTTTCCAAA
ACTTTTTTGCATTATCAGAATGATTTGCTAAAAGCAAAATCAGGAGTTTA
ATAATGGCATTGGGCTGTTCCATTAAAAAAACCATACAGGGGGTGGACGA
ACCTTTTCAAGTCAAAAAAAATAATTATTGAAATGTGTCGATACCCCCTG
GAAAATGACGACATTTGAAAAAGTACCCCTGGAAAGATTCTTTTCATACC
TTGATTAAAAGGGGGTTTGTACTTTTACGGTGTGACGGGATTGGCCCTTT
TTTAGTACGATATTACGGGATTTGACGAAAAAAGAGACGAGAAAACGGTA
TTTTAAAATCAGACGGTGACGGGATTTAGGTACAAGCCGGTGTGACGGTG
TTATTATTTTTTCAATTTTCGGGATTCCGGGATTCAGCAAAGATTTTGAC
GGGAAAACGGTATTTTAAAATCAGACGGTGACGGGATTTAGGTACAAGCC
GGTGTGACGGTGTTATTATTTTTTCAATTTTCGGGATTCCGGGATTCAGC
AAAGATTTTGACGGGAAAACGGTATTTCGAACCCCTACAAACCCCCCCAT
TAAAGTGAGGGTGGACGAACTGAAATCAGTCTCTTAACCATTGGAAGTTT
TTCTCGGAATATCCTCTGGAATTGTTCGTCCACCCCTCTGTATGGATACA
AAATGGAATGACCCATTACTTTCAGAAAAGAAACATTTTAATAACCTTTG
TTTGCGTTCTTTATTTCAGATGTCAATCAGAATTCAAATGGTTGTCCGAA
ATTACATCGGGATCGTCCGAAATTACATCGGGATCGTCCGAAAGTCGACC
TTCAGCAAGTGATTACACCAAAATGACCAACATCGCTTTTTTCTTTGGAG
AACTCTTTAATAATATGAAGGTATTTTGACGTCGTTTATAAATTACATAC
AAACAGTTATAGGTGCTTTACAGCTATACGATAGCTGCTCCAGGATATTA
TGGTTTGTAAACTTATAAATTTTACTAATTCCCCATATTGAAAGTTTATC
GTGGTTTGGATCGCGAGACTTACGATGGGCAACGTTTCGAAAGATTCCTT
CTCCCATCATCGGGCAAGATGGAAGATGATTTCTCCACTATTTGAAGCTT
CAAGAAAATTCTAAAAGATTCGATAATATCTACAATACACCTGCATTAAC
TAAAGATTGCACCAGCATAAAACACCGTGTACCAATTGTATAAGTTAGTT
CTTTATTTCTTGATAATGATAATTTTTGTATCCTCTCATGTACTTATTTT
TTTTCTCAAAGGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTT
TTCGATATNCGACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGGCAAA
TTTGGGCCGAAAAACGGCTAAAAAACAGGTTTTTTGGACTTTGTGAAAAA
TTG

Coding sequence (CDS) from alignment at scaffold_478:587026..595928-

>TCONS_00068045 ID=TCONS_00068045|Name=TCONS_00068045|organism=Clytia hemisphaerica|type=CDS|length=7608bp|location=Sequence derived from alignment at scaffold_478:587026..595928- (Clytia hemisphaerica)
GTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTTTTCGATATNCG
ACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGATGTCAATCAGAATTC
AAATGGTTGTCCGAAATTACATCGGGATCGTCCGAAATTACATCGGGATC
GTCCGAAAGTCGACCTTCAGCAAGTGATTACACCAAAATGACCAACATCG
CTTTTTTCTTTGGAGAACTCTTTAATAATATGAAGGCAACGAACAATACG
AACTTTTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCGAAAGAA
AACGTTCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAAAGACCA
ACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTCCGATCAT
TCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTATGACGTT
AACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATCTCACCGT
CGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTATAAGAATC
ATTTTCGACCATGCAAGCATACCAGATGAAAAACCAGCTCTCCATAGGTG
ACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTCAACGCCAAC
GTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGAAGATGAGCT
AAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTCTAGTAA
AAATCAAACCATCAACACCATTATTCCAAACACTACACCATATGATGAAA
AACCACCCACTCAGAGCATTCAAGATGACTGATGTAAAACAACCCATTTT
GCCATCTAAATGTTCACCACGTGGGCGTGGGCGGATGATGAGTAGAGGGT
GGTTGGAAGATTTCAAACCGAATCCGCCCCCTTTCACGGTAGAGGAATTA
TGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTTTTCGATATNC
GACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGATGTCAATCAGAATT
CAAATGGTTGTCCGAAATTACATCGGGATCGTCCGAAATTACATCGGGAT
CGTCCGAAAGTCGACCTTCAGCAAGTGATTACACCAAAATGACCAACATC
GCTTTTTTCTTTGGAGAACTCTTTAATAATATGAAGGCAACGAACAATAC
GAACTTTTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCGAAAGA
AAACGTTCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAAAGACC
AACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTCCGATCA
TTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTATGACGT
TAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATCTCACCG
TCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTATAAGAAT
CATTTTCGACCATGCAAGCATACCAGATGAAAAACCAGCTCTCCATAGGT
GACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTCAACGCCAA
CGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGAAGATGAGC
TAAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTCTAGTA
AAAATCAAACCATCAACACCATTATTCCAAACACTACACCATATGATGAA
AAACCACCCACTCAGAGCATTCAAGATGACTGATGTAAAACAACCCATTT
TGCCATCTAAATGTTCACCACGTGGGCGTGGGCGGATGATGAGTAGAGGG
TGGTTGGAAGATTTCAAACCGAATCCGCCCCCTTTCACGGTAGAGGAATT
ATGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTTTTCGATATN
CGACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGATGTCAATCAGAAT
TCAAATGGTTGTCCGAAATTACATCGGGATCGTCCGAAATTACATCGGGA
TCGTCCGAAAGTCGACCTTCAGCAAGTGATTACACCAAAATGACCAACAT
CGCTTTTTTCTTTGGAGAACTCTTTAATAATATGAAGGCAACGAACAATA
CGAACTTTTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCGAAAG
AAAACGTTCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAAAGAC
CAACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTCCGATC
ATTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTATGACG
TTAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATCTCACC
GTCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTATAAGAA
TCATTTTCGACCATGCAAGCATACCAGATGAAAAACCAGCTCTCCATAGG
TGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTCAACGCCA
ACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGAAGATGAG
CTAAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTCTAGT
AAAAATCAAACCATCAACACCATTATTCCAAACACTACACCATATGATGA
AAAACCACCCACTCAGAGCATTCAAGATGACTGATGTAAAACAACCCATT
TTGCCATCTAAATGTTCACCACGTGGGCGTGGGCGGATGATGAGTAGAGG
GTGGTTGGAAGATTTCAAACCGAATCCGCCCCCTTTCACGGTAGAGGAAT
TATGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTTTTCGATAT
NCGACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGATGTCAATCAGAA
TTCAAATGGTTGTCCGAAATTACATCGGGATCGTCCGAAATTACATCGGG
ATCGTCCGAAAGTCGACCTTCAGCAAGTGATTACACCAAAATGACCAACA
TCGCTTTTTTCTTTGGAGAACTCTTTAATAATATGAAGGCAACGAACAAT
ACGAACTTTTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCGAAA
GAAAACGTTCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAAAGA
CCAACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTCCGAT
CATTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTATGAC
GTTAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATCTCAC
CGTCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTATAAGA
ATCATTTTCGACCATGCAAGCATACCAGATGAAAAACCAGCTCTCCATAG
GTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTCAACGCC
AACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGAAGATGA
GCTAAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTCTAG
TAAAAATCAAACCATCAACACCATTATTCCAAACACTACACCATATGATG
AAAAACCACCCACTCAGAGCATTCAAGATGACTGATGTAAAACAACCCAT
TTTGCCATCTAAATGTTCACCACGTGGGCGTGGGCGGATGATGAGTAGAG
GGTGGTTGGAAGATTTCAAACCGAATCCGCCCCCTTTCACGGTAGAGGAA
TTATGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTTTTCGATA
TNCGACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGATGTCAATCAGA
ATTCAAATGGTTGTCCGAAATTACATCGGGATCGTCCGAAATTACATCGG
GATCGTCCGAAAGTCGACCTTCAGCAAGTGATTACACCAAAATGACCAAC
ATCGCTTTTTTCTTTGGAGAACTCTTTAATAATATGAAGGCAACGAACAA
TACGAACTTTTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCGAA
AGAAAACGTTCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAAAG
ACCAACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTCCGA
TCATTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTATGA
CGTTAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATCTCA
CCGTCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTATAAG
AATCATTTTCGACCATGCAAGCATACCAGATGAAAAACCAGCTCTCCATA
GGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTCAACGC
CAACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGAAGATG
AGCTAAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTCTA
GTAAAAATCAAACCATCAACACCATTATTCCAAACACTACACCATATGAT
GAAAAACCACCCACTCAGAGCATTCAAGATGACTGATGTAAAACAACCCA
TTTTGCCATCTAAATGTTCACCACGTGGGCGTGGGCGGATGATGAGTAGA
GGGTGGTTGGAAGATTTCAAACCGAATCCGCCCCCTTTCACGGTAGAGGA
ATTATGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTTTTCGAT
ATNCGACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGATGTCAATCAG
AATTCAAATGGTTGTCCGAAATTACATCGGGATCGTCCGAAATTACATCG
GGATCGTCCGAAAGTCGACCTTCAGCAAGTGATTACACCAAAATGACCAA
CATCGCTTTTTTCTTTGGAGAACTCTTTAATAATATGAAGGCAACGAACA
ATACGAACTTTTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCGA
AAGAAAACGTTCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAAA
GACCAACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTCCG
ATCATTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTATG
ACGTTAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATCTC
ACCGTCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTATAA
GAATCATTTTCGACCATGCAAGCATACCAGATGAAAAACCAGCTCTCCAT
AGGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTCAACG
CCAACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGAAGAT
GAGCTAAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTCT
AGTAAAAATCAAACCATCAACACCATTATTCCAAACACTACACCATATGA
TGAAAAACCACCCACTCAGAGCATTCAAGATGACTGATGTAAAACAACCC
ATTTTGCCATCTAAATGTTCACCACGTGGGCGTGGGCGGATGATGAGTAG
AGGGTGGTTGGAAGATTTCAAACCGAATCCGCCCCCTTTCACGGTAGAGG
AATTATGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTTTTCGA
TATNCGACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGATGTCAATCA
GAATTCAAATGGTTGTCCGAAATTACATCGGGATCGTCCGAAATTACATC
GGGATCGTCCGAAAGTCGACCTTCAGCAAGTGATTACACCAAAATGACCA
ACATCGCTTTTTTCTTTGGAGAACTCTTTAATAATATGAAGGCAACGAAC
AATACGAACTTTTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCG
AAAGAAAACGTTCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAA
AGACCAACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTCC
GATCATTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTAT
GACGTTAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATCT
CACCGTCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTATA
AGAATCATTTTCGACCATGCAAGCATACCAGATGAAAAACCAGCTCTCCA
TAGGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTCAAC
GCCAACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGAAGA
TGAGCTAAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTC
TAGTAAAAATCAAACCATCAACACCATTATTCCAAACACTACACCATATG
ATGAAAAACCACCCACTCAGAGCATTCAAGATGACTGATGTAAAACAACC
CATTTTGCCATCTAAATGTTCACCACGTGGGCGTGGGCGGATGATGAGTA
GAGGGTGGTTGGAAGATTTCAAACCGAATCCGCCCCCTTTCACGGTAGAG
GAATTATGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGTTTTCG
ATATNCGACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGATGTCAATC
AGAATTCAAATGGTTGTCCGAAATTACATCGGGATCGTCCGAAATTACAT
CGGGATCGTCCGAAAGTCGACCTTCAGCAAGTGATTACACCAAAATGACC
AACATCGCTTTTTTCTTTGGAGAACTCTTTAATAATATGAAGGCAACGAA
CAATACGAACTTTTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATC
GAAAGAAAACGTTCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACA
AAGACCAACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTGTC
CGATCATTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACATTA
TGACGTTAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGATC
TCACCGTCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATTAT
AAGAATCATTTTCGACCATGCAAGCATACCAGATGAAAAACCAGCTCTCC
ATAGGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGTCAA
CGCCAACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTGAAG
ATGAGCTAAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCT
CTAGTAAAAATCAAACCATCAACACCATTATTCCAAACACTACACCATAT
GATGAAAAACCACCCACTCAGAGCATTCAAGATGACTGATGTAAAACAAC
CCATTTTGCCATCTAAATGTTCACCACGTGGGCGTGGGCGGATGATGAGT
AGAGGGTGGTTGGAAGATTTCAAACCGAATCCGCCCCCTTTCACGGTAGA
GGAATTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042480XLOC_042480Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068045-exon-scaffold_478-1575043694:595749..595928TCONS_00068045-exon-scaffold_478-1575043694:595749..595928Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1575043694:595056..595181TCONS_00068045-exon-scaffold_478-1575043694:595056..595181Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1575043694:593666..593766TCONS_00068045-exon-scaffold_478-1575043694:593666..593766Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1575043694:591237..591271TCONS_00068045-exon-scaffold_478-1575043694:591237..591271Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1575043694:590229..590445TCONS_00068045-exon-scaffold_478-1575043694:590229..590445Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1575043694:589690..589799TCONS_00068045-exon-scaffold_478-1575043694:589690..589799Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1575043694:587559..587709TCONS_00068045-exon-scaffold_478-1575043694:587559..587709Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1575043694:587026..587167TCONS_00068045-exon-scaffold_478-1575043694:587026..587167Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1510915933:595749..595928TCONS_00068045-exon-scaffold_478-1510915933:595749..595928Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1510915933:595056..595181TCONS_00068045-exon-scaffold_478-1510915933:595056..595181Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1510915933:593666..593766TCONS_00068045-exon-scaffold_478-1510915933:593666..593766Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1510915933:591237..591271TCONS_00068045-exon-scaffold_478-1510915933:591237..591271Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1510915933:590229..590445TCONS_00068045-exon-scaffold_478-1510915933:590229..590445Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1510915933:589690..589799TCONS_00068045-exon-scaffold_478-1510915933:589690..589799Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1510915933:587559..587709TCONS_00068045-exon-scaffold_478-1510915933:587559..587709Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1510915933:587026..587167TCONS_00068045-exon-scaffold_478-1510915933:587026..587167Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1491911889:595749..595928TCONS_00068045-exon-scaffold_478-1491911889:595749..595928Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1491911889:595056..595181TCONS_00068045-exon-scaffold_478-1491911889:595056..595181Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1491911889:593666..593766TCONS_00068045-exon-scaffold_478-1491911889:593666..593766Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1491911889:591237..591271TCONS_00068045-exon-scaffold_478-1491911889:591237..591271Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1491911889:590229..590445TCONS_00068045-exon-scaffold_478-1491911889:590229..590445Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1491911889:589690..589799TCONS_00068045-exon-scaffold_478-1491911889:589690..589799Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1491911889:587559..587709TCONS_00068045-exon-scaffold_478-1491911889:587559..587709Clytia hemisphaericaexon
TCONS_00068045-exon-scaffold_478-1491911889:587026..587167TCONS_00068045-exon-scaffold_478-1491911889:587026..587167Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068045-proteinTCONS_00068045-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:587026..595928 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.6046	28.6799	8.92771	7.05982	12.6521	11.0784	9.34884	11.2556	11.1041	10.0543	11.2324	8.20033	12.015	15.2106	13.1253	13.6629	15.8637	16.476	8.99694	9.40051	10.7998	11.7966	26.6767	26.5887	18.1012	18.7521	5.04162	5.10049	15.2978	15.0721
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003890MIF4G-like_typ-3
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003723RNA binding
GO:0005488binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068045 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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