TCONS_00068111 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068111
Unique NameTCONS_00068111
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068111 ID=TCONS_00068111|Name=TCONS_00068111|organism=Clytia hemisphaerica|type=transcript|length=3287bp
GAAATAGAGAGCAGTGTATACACCGATCAATGTGGCAAAgtatttattga
aatttttgacactCCTTGTTTTCAAATCACGAAGACATTGAATGAAGAAA
GATGAAGGTGCTGGTGTTTGTAGCCATTGTCTCTTGTTTAGCTGGAGCGA
AAGGGTATGTTGACCAATACGACCGGCGTTTTATGAGAAGATTGGCAGCT
TTTGACGATGATGTTGAGCACATACCTGAATACGACTATCAAAGGAGTCC
AAGGAAAACGTTTGAGAGTGATGATAATGGAAATTATGCATACGATATTC
TAGACGATCAAGATGAAGGTGAGAATGAAGAAAGAGCAAACGAAAGAAGC
GTTTACCGAAGAGGAGGATATCGAATTGTGAATGATGACACCAGACAACA
ACGACGATATTCCTCCATTCCCGATCAAGTAAAAGATTACTTGATGAGAA
GACGGTACGAAGATGTGAGGACCGATCGCCGACCATATTACCAATACAGT
GATGTCGAGAGTGAAGATGGGCTTACATCAGACTATTACGATGGAATacc
atttgaaaaaagaaacaagGCAAACTATGAAAGCCTTTTTAATATGAGGG
ACATTGAAAGAAACGCAGCAATAGAAGACAATAAGCCAAAGACGGAAGTG
ATGGTGAAGAGAGCCAAGGTGGATGATGGTGGTGAAAATGGTCCTTTTTC
ATGTGGCTTTGAAACAGATTGcacgaaatattttcaattcgtCGGAACAA
AACTACAGTGGAAGAAAAGCACTCGAATTCCTGATCGGAAAAGTTCACAT
GGTGCATCCATGGAGGTGGACGTCAAGAAGACGAACACGAGAAAAGATCG
TGCTTCCATGTCGTACAAATTCAACGTACGTCACGCGGCACAATGTAATG
AGTTCTACTACAACATGTTCGACGAGGAAGGATGTGACGTCGTCAGATTG
TTGGTCACCATGCAATGTGACGGAGAAAACAAGCCAACTGAATTGTTCAG
AAAAAGTTGGAATGAAAAGGGTGGTTGGAATCGTGTGTTGATGAATATCA
AAAAAACACCAGGAACTATTTGCACTATCACATGGCGAGCATCTCAAAGT
TTGTCACCAGAAGGCAGGTTGAATTTGGATGACATCACAATGTACAACCG
CGCATGTCCAAAACCAAATGAAGTGGAGATTCCAAGTGCAGCTAGTTGTA
CACTGGAAGGGAACACGTGTGAATGGAAGGAGACTGGGCTCAAGTGGAGT
TACTCCAATAAAACCACGCCTACTCTTTACACTGGTCCTGATCTCTACTA
TGGAAAGAAAGTCGGACCTAAATATGCTTTCCTTGAGGCAAGTGGAAGCA
ACTTCCCATCCGTCAAAGGTGTATTGACAAGTCGCAAGTTGAAGGGAGAC
ACTGACAACTGTTTCCGAATGATGGCTTACATGTATGGTGAGGATTTGGG
TACACTACAAGTGTCATTCAAAAGTCCAAATGTCACCGATAAAGTGGTGT
ATGAGAGGAAAGGCGATCAAGGCAAAAGATGGTTCGAAGCTTTCGTAACC
ATTCCAGCTAATACTGAAACCCAGATCGAAATCAAAGGGGTGACAGGGAC
TGGACCTCGTTCTGATATTGCCATTGATGACATTCTGGTTGAACCTGGAA
ATTGTGATGAGCAAGGAGAGCTTGTTGGGTGTTCATATGATGTTGCTGGT
TCAAACGATCTATGCCACTTCACTGGAAACCCAAACTGTGGAGAGGTTGA
AATCAATATCCCTAATCTTGGTGAGGCCAAGCAGAATCGTTTGGTACAAA
TtataccctaccaagccaaagattttgaaatttcatttgatGTTCAACCT
GGCGATAAATCTAGCGGTTACGCAAGTTTAGTACACTTGACAACTGGATC
AGATTGTTGTGGAAGGGGTTCACGCCATCCAGCCATTTATTTCCATCCCA
ACACACTGAGAGTGATGGTGTGTACGACCGAAGCTGTCGGAGGTCATAGA
TGTATCATAATGCCAAGAGATATCCCCACTGGTCAAACAAGTCATGTTCA
ATATACTTTCAAAGAAAACCCATCGACACCAGGCCGCGGAGTTTGTGAGT
TATTTGTGAACGGACAAAAGATTGGAGCTCTTAATGTGTACACAGCTGAG
TTCCCCAACGTCAAGATATTCTCTGGAGACATACAAAAGCAACCAGTTAA
CAACAAACACATTATCACTAATTTCTTCTACAAGAATACAGCAAAAGTGG
AATCATGCACGAAAACATGCACTGcaaacgtcatcaaaacaaaggtcaaC
AAAAAGGAAGTCACTGTCGCTAAATACAACAAAACGCAATGTCCGGTATC
TTTCGAAAATGAAATCGAAATCCCACTGTCCATTCGCAACGGACGTTTGG
CCTGCATGGCGTTCGATTATCTGATTGGACAAAACAAGAAGGGCAATGCT
GAATGTGAGATTAAAGTGCAATACCGTGAGTTCGTTTCCAACAGATGGGT
GGCTAAACCTGTTCACACGTTCAAAGATAAATTCGAGTTCAATGTATGGA
TGCCCTTCAGACGTGATTTTGATGTCATCTTGGAAGAAAACAAGAAATAC
AGGATTGGTGTGATTCACAAATTGACCGATCAATGTCCAGAGATTTCTTT
TGCCAACATGAAACTCTTGGATGGACCTTGCGCTTTACCTGAAACTCATC
AAGAACACTGATCAATGGAACACGGTACATCACTGAAACTGATGTGAGCA
GGATCGTAAATGGTAAATGGAAAATGGAAAACTTATAACTTAAATAGGAT
TAGAAACTTATAATCGTAATAGTGTTTCAGCGAGTGATAAAAGTAGTTGT
TTACTATAAGAATCATAAGCCAATGCCACGagtttcaaaattatttcaaa
aacattaacCTTCCCTtcgagatttttcaaaaaacaggCCCTGCGGAAGC
GGaaagactggggagacttcagccacTTTTgattaaattagatttttttt
ctcaaatttctagcgaatttaattttattatgagccttcagcctccccac
ttttacggtcgttccgccgggcctgaaaAAGATATTTagggaattaattt
ttcttttttcgtgGTTTTACAACCCTAACACAGGCTTAAAAATCGGAACG
GTGTTCGCCCTGAAATTATTCATTCGACTATTCATTatatcatagtataa
gaaagccgcggctggaatatgtaccgcattgtcttttcagttaattgctg
ttccatctctgtctccgagctttataagaacatcgag
Run BLAST on NCBI

transcript from alignment at scaffold_48:169855..182013+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068111 ID=TCONS_00068111|Name=TCONS_00068111|organism=Clytia hemisphaerica|type=transcript|length=12159bp|location=Sequence derived from alignment at scaffold_48:169855..182013+ (Clytia hemisphaerica)
GAAATAGAGAGCAGTGTATACACCGGTACGTATCAATCTGGATAATTATG
ATATTAGCCGGACCTCCAACTGTAGTAATAAGTACATatttatcgcatga
cttcgagtgcaatacgacaAATATTTCACGatttccgagatttttccgtc
aTATTTTTGCGAACCTTGCGAGCAAAGTTAGGAAATACGATTGATAAGAT
TCTTGATACAGTAGACTGAGAGTTTCTTATCGGTGAAGTAAATTTTGTTA
TTGCGTGTTTGCGGTGGACTAAAGTAGTCTTTCTTATCTGAAATTGTCGG
TTTTACTACTGTGATAACGATCATGAAAAGTTACATCAAATTGCAATTAT
TTGTCCCAGCTTCTAAACATTTCGGTCAAATTCATCGGTGATATAATTTG
GGATTCAAAAAGATCTTAATCAGAATTGAAAGTAAGAGCATCGGTTTTTA
TTGTCAAGTTGCGCAGCTTTACTTTGCATCAGTGGCttcattcattaaaa
aaattaatgtgCTTTGTCTGGAAAAGACATCTTTTTATAGATCAATGTGG
CAAAgtatttattgaaatttttgacactCCTTGTTTTCAAATCACGAAGA
CATTGAATGAAGAAAGATGAAGGTGCTGGTGTTTGTAGCCATTGTCTCTT
GTTTAGCTGGTAAGGTTTTTTGTATACATACATTCGCGTTATTGAGTTTC
AATCCGAAGGCAAACAAAAGTGATGTCTTAAAATTCTTTCTTTGCTTCGC
GTtttacatttttcgaatttctgGCGGTAAATGTAACAACCAATCTAGTG
TTTGTTTGCGAGCCACGCAACTTACGTCGAAAATGAATACCTTCAAATCC
TACATAAGGGATTCGAATCTAGCTTTGCGTCACGAGGCTTGCAtttctat
tttaatgaaaactttaaaaaacgtttaaaaactgTTACTGGACAGCCCAA
TACAAATCTCAAACAATTTTGATCCCTACAGGAGCGAAAGGGTATGTTGA
CCAATACGACCGGCGTTTTATGAGAAGATTGGCAGCTTTTGACGATGATG
TTGAGCACATACCTGAATACGACTATCAAAGGAGTCCAAGGAAAACGTTT
GAGAGTGATGATAATGGAAATTATGCATACGATATTCTAGGTAAAAATAC
TTTACAGTGTTAATGCCCAGTTAAATACAGTTTCATGAAATACAcgcctt
tttttataaaaatagtgTACTtcggatgagggtcaagtattcttaaaaaa
ttaccaaaattgagggtaaaatattcttaacgtattcttacttgtttaga
cttgacttttatTCATAAACACGAGTTTAAGACTTTTGAGTGCACATTGG
GagctaaaattatatttctgcctcaaagtttcNAGACTTTTGAGTGCACA
TTGGGagctaaaattatatttctgtcTCAAAGTTTCAAATTAAGTTTTaa
caaaaaacccatttttttctgttaaccaaatacttTAAAATGCCTGTATT
CTCATTAAATTCTGTCAAACTTACCctggagggtattcttagggtattct
tacgatttggccaattttcaccctgatgtTGTGATAGAAGATCTTCTTAT
AATAAAAGCGTGCAAATGGATAGAACAAAATGAGAAATGACAATTTAATA
ACCCGTGTGAGGTACTAGGCTTGCGAGCTTAGGgagggaaaaaaggaaaa
ttttataaattttacaaccttgattgggacaaatttgaccaaattttgat
cattCCGGGGgctaaaaagtttaaattttcctgttttccgacccttaatg
ggactgaaataggattttctgatttttacaaTCCTTGGCAtagtgggact
ttggaagtttaaaaaaggtacccttaaaaGGGCAGCACATATCCGTACCC
TCCATAATTTAATAGTCGAATAAAATTTCTTATCTTTATCTCTTGACGGG
ATCAGATCTCCGTTCAATTTCTTACTAAAAACCTCAAGACTTGATTTGCG
CTAGTCAAGAGCAAAAAAATTAGTCAGTGactcatagtgtcctcctggaA
GGGTCAGTTCCCTCAAGGAAAATATCATTGCCAGGTTTTGACCCCCtgtc
ctgaaaatgaaaaaagtcttTGCCCTTCTATGGAAAGTTCAACCTCCCAC
CCTTTTTTACACACGCCCTGATTTTGAAAACTGTCACCGTAACATGCTCG
TCTGAAGAGTGTTTCTCAAAAACTATTGTACCGGTTCTTCTGAGAAGAGT
GGTAATAATGGAACGATATTAGTGAACGGAAAACTTTTGacgattttaaa
aaaattgagaatattttacactTATATAAGGATCAGTCAGTCTCCAAATA
ACAGCGTACGAGAAAGCAGGTTCAAACTGACCATCGTGTTCTTCTTCCAT
CACAGACGATCAAGATGAAGGTGAGAATGAAGAAAGAGCAAACGAAAGAA
GCGTTTACCGAAGAGGAGGATATCGAATTGTGAATGATGACACCAGACAA
CAACGACGATATTCCTCCATTCCCGATCAAGGTAAGGATTTAATCACGCC
ACATTCAAACTCTAGATCAAGGAAGAAAATCTGCTATCCTGTAACACCTT
TAAATCTTTTCATGTTTTACAATCATAGTAAAAGATTACTTGATGAGAAG
ACGGTACGAAGATGTGAGGACCGATCGCCGACCATATTACCAATACAGTG
ATGTCGAGAGTGAAGGTAAAAACATCTACTTTCCTTTTTCTATTAAAAAT
TGGATCAAAAANATACAGTGATGACGAGAGTGAAGGTAAAAACATCTACT
TTCCTTTTTCTATTAAAAATTGGATCAAAAACTCTAAGTCAATGACCAAG
AACAATTCCAAAAATAAAGAAGCGATCGAGAAAACTACACCCTACAAAGA
CTGAATATACTGTAGATCGGAGCTCCGTTGAATGTTTTCCTGGTCGCTTA
AGAGAATTTTTCGGCTTCCTTCCTTTTCGTAACTCAACTCTCACCGTCCC
TTCGAAGTTTCAGTTATGGATATTCGACCGCCATTTCAAATATCACCTTG
AAAAAAGTGTGAGGTCAAAAGTTTATGTATTCAGGAGTAAGCCACTTTGG
CTGCAAGTTTTTAGCTCAACCTAACGATGATAAGTTCTTATTGATTTCTT
TTTACAAGTAGATGGGCTTACATCAGACTATTACGATGGAATaccatttg
aaaaaagaaacaagGCAAACTATGAAAGCCGTAAGTAATTTACGCAGTGC
TAAGGGTTTGCGATTGTAACGTCCCAGTTTCTTCATATGGTTTGAAGTTT
CAAGCATCGGGTGTTTTGATTAAGGTTGAAGGGCGTCTGCTTACCGAATT
TTGCAACGCTATGCATTTAAAATCGTTGCTTTTAAAAAGCATTCTATAAT
CAAACTCGGACATTTTACCGAGAGTGTCAAGCATCTTCCAATGAAAGATT
TCTTTGTAAATGAATCATCTTTTCCATTTCATTCAGTTTTTAATATGAGG
GACATTGAAAGAAACGCAGGTGAGTCAAAATTCTTCCGTATAATTATTTC
ctttatttcctttttcaacaaccctcgaattttcaaatgaaacaatTTAC
CGCTACTTATCTGAGGCCGAAAATATTACATGAAAGTGCATTAAATTTtg
tattgaaaacaaatttatcaaacaaTTTCTGCAAGGTCTTTCGTAGTTTA
TTATATCATCATTCCTAAAACATACCGGGAACATACCATTAAAAACATCA
ATTCTAAAAGAACCTTTGTCCTCAAATTAAACAAGAGCAGGATAAAGAGG
CTAAAGATGCCAAAAAAAAGAGAGcttaaagaaaacttttttgattaagC
AATAGAAGACAATAAGCCAAAGACGGAAGTGATGGTGAAGAGAGCCAAGG
TGGATGATGGTGGTGAAAATGGTCCTTTTTGTAAGTTGACTTCTTGTTCA
TTTTATGTATCGGTATCAAGGTATGTTTGTTAGGTGAGCAAAGATATATG
ACTTCATCTATATCAGAACACACTACGAAGCCTGAATACTGTCCATAGAT
ATCTAACACTAGGCGCAGCTACTCTGTTCCTAGATGAAGAAAAACAATAT
GCAATCTTAGCCGAGTTGAcgtaaatcaatcaatcaatcaatcaatcaca
tTACAATATATTCCTGCCGTTTCAGTTTCTAATTGCCTGTACCATACTGT
GGTCTACTCAGCAAaatggcgcattattttgcttcaactgGGGTCAACTG
GCATCTCTTGAGAATGACAGAGTAGCTTTATCTTTTGTTTAGTATAAGAT
AACTGTGGTACTGTACTGCACTGACAGAAAGGCCAAAAAGGACATTTATT
TTGGGATTTCTTGATgataaatttttctttcataatCTACCTATGACAGT
ATCCTCATAAGTAAGACTACAGTCCCACTCCACCCTCTTTATATTCACGA
GCCTTTAGATGGATATTTCTTTTCCAAATACTCTTGCAGCATGTGGCTTT
GAAACAGATTGcacgaaatattttcaattcgtCGGAACAAAACTACAGTG
GAAGAAAAGCACTCGAATTCCTGATCGGAAAAGTTCACATGGTGCATCCA
TGGAGGTGGACGTCAAGAAGGTACGCATTGTGAAATACCCAGCCACGTCC
CCTGTGTACTATCGGCTTTTTATGCTTGCTGGTAGCgccatcagtaacgt
aaataaagcctgggatataCAGGCACGAGGTTCTGTAATACCATATAGGT
ATCGCGGGGTTGGGGATTTTAAGTACGGGTAAACGACAATTATTCGTGga
cgttaatttttatttttgggcgTTGATTTTTATTTGTGGGCGTTAGTTTG
AACACCAGTAAAACAGTggaataaaatagaaaaaaaaatagaagagCTTT
TAACTTGCTTTGCCGGGTGTTTGAATGACTGTTTATAATTAAATTATTCG
CTGTTCAGCGGAATTTACCAAACTAGAACTCTTTTCAGTCCTCGAGAATA
ACTAAAGATAGTTCAGCCTGAAAGTCTATACACTTGACAAACCCGTCAAA
TATAAATATCTTATTTCGGAGTGGCCAGAAAATCATATTTTTACACATTC
AAAATCTGTTGAATACCTTGTGGAATGTACAATAAAGAATCTTGCAATAA
TACACATATAATACACACTTTACTTTTTCAGACGAACACGAGAAAAGATC
GTGCTTCCATGTCGTACAAATTCAACGTACGTCACGCGGCACAATGTAAT
GAGTTCTACTACAACATGTTCGACGAGGAAGGATGTGACGTCGTCAGATT
GTTGGTCACCATGCAATGTGACGGAGAAAACAAGCCAACTGAATTGTTCA
GAAAAAGTTGGAATGAAAAGGGTGGTTGGAATCGTGTGTTGATGAATATC
AAAAAAACACCAGGAACTATTTGCACTGTGAGTTGAGTGTTTATACTAAG
AAAGAGTGCTAGCATCTATACAGCGTGGAGTGCAccatttaaaatctttt
tggTCTGAAGCCTATATTACTATAGCCCCATCGCGGGTACCATCGACTTC
GCTAATTCGAGCAAATGGGGAATCTAATCACTTTCGACTTACAAGATATA
TCCCAAATATAGAAATTTATTATCATATTGGTTATTAATAAGACTGTGTt
cgagttttcaaaaatatccaGGTGGTGCTTAAACAAATCAAAGGAATAGT
AATTTCGTTAGCAGCAAAACGTATTGTAACCACACCAAACCAACTTCGTT
TAGATCACATGGCGAGCATCTCAAAGTTTGTCACCAGAAGGCAGGTTGAA
TTTGGATGACATCACAATGTACAACCGCGCATGTCCAAAACCAAATGAAG
TGGAGATTCCAAGTAGGTTAATGTACAACAATACCAATACAATCTCATCT
CCACTGTAAACCTTCTGATTTATGATGGGGCGtataaaagtttatttgat
GACATATAGTAGATATAAAAAGACTAAAACACCCAAAATCTCTCAAGGAT
TATGAGTTTGTAAAAGTTTATTGTCTTGGCTCCATTCTATAAGACTCGAc
tttaatttgaaatattacgcAGAAAAAATGCAAGgtcaaaagtgttttcg
gtACTTTGAGTTCTAAACCCTTCCTGTACCGGTGTCGCTATGCCGACACG
GGGTATGGGAAAAAGgcgaattttgattttgaaatcgatttcttttttta
aggttACACAAGTATATTACAAGTACTTAATGAATTAACAGGATCgaatt
tcatgaaaataactttattgaaattttgaccgtttttggACAATATTCTT
ATTAAGTCATTAGGACAAGAAAGCACCAAATTTGTATATTGTACCAGATT
GTATGTCTTTCCAGGGGtgggggcactccaggtaagtgacctaccggacg
tgcgacccttaagggtaggtttttttggactttggaaagcgcaatgtaag
ggttgatttgtgagcaagtgggaaaaagggcactgtaagggtgtaaaatt
tgagtaaataccaaattttgaggtaaaatttgagaaatttcaaaaaattt
tcgaaaaattgcactataaaggtcgattttcagccaaatttttcctgcac
tgtaagggtccgattttagagacttgatttttggccgaacgtacggtcgt
tttcaaaatcgagtgcccccccggaTGTCTTCCAAAGGAACCCATCGTTT
CATTCACAAATAGAACAGGATACACTAGACTTTTACGATGAAATACCACA
TGAAAAAGAAACAAggcaaaatttacattttttgatcAGATTACACAGTG
CAAAGGAGGCATGATCATAATCCGccaaattcatttttattttatacccA
AGACAGTTTGTGAAATATAATATGGTTAAATACACTTGTAGCTTGTTTGA
TTGTTAGACTGGTCCACATTTCGCCATTTGTTAATCAAACCTTTCTCAAA
GAACCCCCTTATATTTTTAGCTTTGGTTGGAAAACGTCTTGGGTGACATC
AGCATAGTTCGGATTCGACAATATTGTAATGGAAGGATTTTGACCACCCT
CCTTgtcattcaatatcaaaaaagtccaaaaaaagatcattttgacATTA
ATACCTCTTCCAACAACAGTGAAATCATCCTAAAAGGTATTCTTTCGATT
CATTTCAGGTGCAGCTAGTTGTACACTGGAAGGGAACACGTGTGAATGGA
AGGAGACTGGGCTCAAGTGGAGTTACTCCAATAAAACCACGCCTACTCTT
TACACTGGTCCTGATCTCTACTATGGAAAGAAAGTCGGACGTAAGTTGGA
TAATATTGAAGACATGTACACATTTTttcatataagaacaaactaagaaC
ATAAGCCTTTGATTGCCAAAatattaggaacattttaaggctttgcagac
cataaaatacctattttcttaggagaattgacaaaaatactcataaaatg
gtgaaaataagaacatgttaagaacattttgaggctttaaaatcaaaaag
ttaagaacatccaaaggttctaacaattttggatgttcttacaatAAAAA
CGTGTAACCTGATGAACCGATACCTATCAGTAACCCACTTGGATCTAAAA
CACATTGGGTTTTGGACTCGATCACTGAAGTATACAAATCTTTAACACCA
CTGTTTTTATTTCACACACTGTATCAATGTATCGCAAACATAAGAAATAC
TGGTAAAAACTTTCCATACCAAACAAACTTATTTAAAATGTTTCTCACAT
TTTACTACAGCTAAATATGCTTTCCTTGAGGCAAGTGGAAGCAACTTCCC
ATCCGTCAAAGGTGTATTGACAAGTCGCAAGTTGAAGGGAGACACTGACA
ACTGTTTCCGAATGATGGCTTACATGTATGGTGAGGATTTGGGTACACTA
CAAGTGTCATTCAAAAGTCCAAATGTCACCGATAAAGTGGTGTATGAGAG
GAAAGGCGATCAAGGCAAAAGATGGTTCGAAGCTTTCGTAACCATTCCAG
CTAATACTGAAACCCAGGTATCATTACTATGAAACTCTATATTCTTAACA
GAAAACAGTGTTAAATTGGTTTGTTGGTTACAAAGAAAGTGGGTAAAAGA
ATTTTTCACCCATAGCTACAGACGATACTTTAATAGACATTCTCCTATTG
CTTATAGATCGAAATCAAAGGGGTGACAGGGACTGGACCTCGTTCTGATA
TTGCCATTGATGACATTCTGGTTGAACCTGGAAATTGTGATGAGCAAGGA
GAGCTTGTTGGGTGTTCATATGATGTTGCTGGTTCAAACGATCTATGCCA
CTTCACTGGAAACCCAAACTGTGGAGAGGTTGAAATCAATATCCCTAGTA
AGCTCATAGAGTcaatttaaagttttctttccAAACTTCTCAATGTGCAA
CTTTTTTGCAATACTACAGTTCCATCGAAAACCTGAGATATCTGGGTATG
TAGATTTCTTGGAAAGCGATGATCAAGTTTAATGAATATAACAACCATAG
TGTCGTTGGACAGCTCTGCTACAAATCTACAAGAAGCAGCGGACTTCTTT
TCCTTCTATCTTTTATGGGGTTAATTACCAACAGTGCACAGTGCGACAAC
CATTGAGAACGTAACTAAGGTTTGAAACATTATGTTCTTATCATCAATTC
ACAGATCTTGGTGAGGCCAAGCAGAATCGTTTGGTACAAATtatacccta
ccaagccaaagattttgaaatttcatttgatGTTCAACCTGGCGATAAAT
CTAGCGGTTACGCAAGTTTAGTACACTTGACAACTGGATCAGATTGTTGT
GGAAGGGGTTTGTATTCATTACAACGATAAACAATTTTCCCGATCGCAGG
ACATACCCATGGTTATTAGTTTACCCCATCTTTCGTATCAGTTTTACAAT
TTATCTCTTATGTCCTGTACACGACTCTTTCAAAGCAGCCCCTCCTCATT
CTGAAAATGCATGAAATATGAACAATCAACGACTAGTATAATTATGCGTT
CTTTACTTGTAGGTTCACGCCATCCAGCCATTTATTTCCATCCCAACACA
CTGAGAGTGATGGTGTGTACGACCGAAGCTGTCGGAGGTCATAGATGTAT
CATAATGCCAAGAGATATCCCCACTGGTCAAACAAGTCATGTTCAATATA
CTTTCAAAGAAAACGTAAGACCTTAAGGATATCTGTACTTAAGTGTTTTT
GAAGTATAGAAATTAGATCTAATAATTATATAGGAAAGGGGTCAATATGA
AATTGATAACACGAGGTTCGTAGATAATTCGCCGTTTGCAGTGTAAAAAT
TAAACCCCTGATTACAATTTCATAGGCTCATCATCTCAATTTTTCATCAT
AGCCATCGACACCAGGCCGCGGAGTTTGTGAGTTATTTGTGAACGGACAA
AAGATTGGAGCTCTTAATGTGTACACAGCTGAGTTCCCCAACGTCAAGAT
ATTCTCTGGAGACATACAAAAGCAACCAGTTAACAACAAACACATTATCA
CTAATTTCTTCTACAAGAATACAGGTAAGGCTGGTCATCGCAAAGACATA
GTGTTTTTTCTTGAGTTGAAAAAAATGTCCCCTGAGATAAGCTTCGAAAA
AAGACCAACTCTACCGACTCAAATTCTAATCGTATTCAATTCAAATGCAA
ATGTTGAAGAACTTTGTAATAGAGGGAAGGGTGTTGCCTGACATAATGAG
ATTCAGAAACCTAAACGTGTACCTGTACTGTGTTATGAATCGCAGCGATG
TATATTTgatgaagatgatgattttctacGAGGTCAATAAATTTGTCAAT
GTAAACTTTCGAATCTCTCTTTCTCTCATCAGCAAAAGTGGAATCATGCA
CGAAGACATGCACTGcaaacgtcatcaaaacaaaNTACTTGTAGGTTCAC
GCCATCCAGCCATTTATTTCCATCCCAACACACTGAGAGTGATGGTGTGT
ACGACCGAAGCTGTCGGAGGTCATAGATGTATCATAATGCGAAGAGATAT
CCCCACTGGTCAAACAAGTCATGTTCAATATACTTTCAAAGAAAACGTAA
GACCTTAAGGATATCTGTACTTAAGTGTTTTTGAAGTATAGAAATTAGAT
CTAATAATTATATAGGAAAGGGGTCAATATGAAATTGATAACACGAGGTT
CGTAGATAATTCGCCGTTTGCAGTGTAAAAATTAAACCCCTGATTACAAT
TTCATAGGCTCATCATCTCAATTTTTCATCATAGCCATCGACACCAGGCC
GCGGAGTTTGTGAGTTATTTGTGAACGGACAAAAGATTGGAGCTCTTAAT
GTGTACACAGCTGAGTTCCCCAATGTCAAGATATTCTCTGGAGACATACA
AAAGCAACCAGTTAACAACAAACACATTATCACTAATTTCTTCTACAAGA
ATACAGGTAAGGCTGGTCATCGCAAAGACATAGTGTTTTTTCTTGAGTTG
AAAAAAATGTCCCCTGAGATAAGCTTCGAAAAAAGACCAACTCTACCGAC
TCAAATTCTAATCGTATTCAATTCAAATGCAAATGTTGAAGAACTTTGTA
ATAGAGGGAAGGGTGTTGCCTGACATAATGAGATTCAGAAACCTAAACGT
GTACCTGTACTGTGTTATGAATCGCAGCGATGTATATTTgatgaagatga
tgattttctacGAGGTCAATAAATTTGTCAATGTAAACTTTCGAATCTCT
CTTTCTCTCATCAGCAAAAGTGGAATCATGCACGAAAACATGCACTGcaa
acgtcatcaaaacaaaggtcaaCAAAAAGGAAGGTGAGAGAACAGGTTTC
CCTTTACTTTGGAGCTACATGTTATATTGGTGCTCGAgaattcaaaatga
aataaagatACTAAATTCAAATTGCGCATTTCCATGAGCTTagatttgaa
ttgaatttatGTGATTCGATCCAGGGTGATAGATGTTGtaaagaaagttt
caataatTCTGCACCATTTTCGTTTATAGTCACTGTCGCTAAATACAACA
AAACGCAATGTCCGGTATCTTTCGAAAATGAAATCGAAATCCCACTGTCC
ATTCGCAACGGACGTTTGGCCTGCATGGCGTTCGATTATCTGATTGGACA
AAACAAGAAGGGCAATGCTGAATGTGAGATTAAAGTGCAATACCGTGAGT
TCGTTTCCAACAGATGGGTGGCTAAACCTGTTCACACGTTCAAAGATAAA
TTCGAGTTCAATGTATGGATGCCCTTCAGACGTGATTTTGATGTCATCTT
GGAAGAAAACAAGAAATACAGGGTGAGTGCGGACCGATATATAATTATCT
CCATTTGCATATATTCGCTTGTTTAGACATAAGAACAATATTCaacttaa
tatttttatttctatattCAATCTTAGTAACGGAGGTCTGTAATAGAATT
GACTTTTCTCCCTTCCATGCATCTTTGAATTATACCTCTCGACCGAAGCT
ATTCATCAAATGACTTTTTCATTAGATTGGTGTGATTCACAAATTGACCG
ATCAATGTCCAGAGATTTCTTTTGCCAACATGAAACTCTTGGATGGACCT
TGCGCTTTACCTGAAACTCATCAAGAACACTGATCAATGGAACACGGTAC
ATCACTGAAACTGATGTGAGCAGGATCGTAAATGGTAAATGGAAAATGGA
AAACTTATAACTTAAATAGGATTAGAAACTTATAATCGTAATAGTGTTTC
AGCGAGTGATAAAAGTAGTTGTTTACTATAAGAATCATAAGCCAATGCCA
CGagtttcaaaattatttcaaaaacattaacCTTCCCTtcgagatttttc
aaaaaacaggCCCTGCGGAAGCGGaaagactggggagacttcagccacTT
TTgattaaattagattttttttctcaaatttctagcgaatttaattttat
tatgagccttcagcctccccacttttacggtcgttccgccgggcctgaaa
AAGATATTTagggaattaatttttcttttttcgtgGTTTTACAACCCTAA
CACAGGCTTAAAAATCGGAACGGTGTTCGCCCTGAAATTATTCATTCGAC
TATTCATTatatcatagtataagaaagccgcggctggaatatgtaccgca
ttgtcttttcagttaattgctgttccatctctgtctccgagctttataag
aacatcgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042523XLOC_042523Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068111-exon-scaffold_48-1491911889:169855..169879TCONS_00068111-exon-scaffold_48-1491911889:169855..169879Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:169855..169879TCONS_00068111-exon-scaffold_48-1510915933:169855..169879Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:169855..169879TCONS_00068111-exon-scaffold_48-1575043694:169855..169879Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:170395..170513TCONS_00068111-exon-scaffold_48-1491911889:170395..170513Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:170395..170513TCONS_00068111-exon-scaffold_48-1510915933:170395..170513Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:170395..170513TCONS_00068111-exon-scaffold_48-1575043694:170395..170513Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:170836..170994TCONS_00068111-exon-scaffold_48-1491911889:170836..170994Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:170836..170994TCONS_00068111-exon-scaffold_48-1510915933:170836..170994Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:170836..170994TCONS_00068111-exon-scaffold_48-1575043694:170836..170994Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:172260..172385TCONS_00068111-exon-scaffold_48-1491911889:172260..172385Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:172260..172385TCONS_00068111-exon-scaffold_48-1510915933:172260..172385Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:172260..172385TCONS_00068111-exon-scaffold_48-1575043694:172260..172385Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:172483..172569TCONS_00068111-exon-scaffold_48-1491911889:172483..172569Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:172483..172569TCONS_00068111-exon-scaffold_48-1510915933:172483..172569Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:172483..172569TCONS_00068111-exon-scaffold_48-1575043694:172483..172569Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:173016..173084TCONS_00068111-exon-scaffold_48-1491911889:173016..173084Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:173016..173084TCONS_00068111-exon-scaffold_48-1510915933:173016..173084Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:173016..173084TCONS_00068111-exon-scaffold_48-1575043694:173016..173084Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:173341..173373TCONS_00068111-exon-scaffold_48-1491911889:173341..173373Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:173341..173373TCONS_00068111-exon-scaffold_48-1510915933:173341..173373Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:173341..173373TCONS_00068111-exon-scaffold_48-1575043694:173341..173373Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:173704..173784TCONS_00068111-exon-scaffold_48-1491911889:173704..173784Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:173704..173784TCONS_00068111-exon-scaffold_48-1510915933:173704..173784Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:173704..173784TCONS_00068111-exon-scaffold_48-1575043694:173704..173784Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:174344..174474TCONS_00068111-exon-scaffold_48-1491911889:174344..174474Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:174344..174474TCONS_00068111-exon-scaffold_48-1510915933:174344..174474Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:174344..174474TCONS_00068111-exon-scaffold_48-1575043694:174344..174474Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:175036..175281TCONS_00068111-exon-scaffold_48-1491911889:175036..175281Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:175036..175281TCONS_00068111-exon-scaffold_48-1510915933:175036..175281Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:175036..175281TCONS_00068111-exon-scaffold_48-1575043694:175036..175281Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:175608..175716TCONS_00068111-exon-scaffold_48-1491911889:175608..175716Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:175608..175716TCONS_00068111-exon-scaffold_48-1510915933:175608..175716Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:175608..175716TCONS_00068111-exon-scaffold_48-1575043694:175608..175716Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:177013..177144TCONS_00068111-exon-scaffold_48-1491911889:177013..177144Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:177013..177144TCONS_00068111-exon-scaffold_48-1510915933:177013..177144Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:177013..177144TCONS_00068111-exon-scaffold_48-1575043694:177013..177144Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:177615..177871TCONS_00068111-exon-scaffold_48-1491911889:177615..177871Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:177615..177871TCONS_00068111-exon-scaffold_48-1510915933:177615..177871Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:177615..177871TCONS_00068111-exon-scaffold_48-1575043694:177615..177871Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:178012..178201TCONS_00068111-exon-scaffold_48-1491911889:178012..178201Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:178012..178201TCONS_00068111-exon-scaffold_48-1510915933:178012..178201Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:178012..178201TCONS_00068111-exon-scaffold_48-1575043694:178012..178201Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:178509..178661TCONS_00068111-exon-scaffold_48-1491911889:178509..178661Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:178509..178661TCONS_00068111-exon-scaffold_48-1510915933:178509..178661Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:178509..178661TCONS_00068111-exon-scaffold_48-1575043694:178509..178661Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:178867..179018TCONS_00068111-exon-scaffold_48-1491911889:178867..179018Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:178867..179018TCONS_00068111-exon-scaffold_48-1510915933:178867..179018Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:178867..179018TCONS_00068111-exon-scaffold_48-1575043694:178867..179018Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:179207..179378TCONS_00068111-exon-scaffold_48-1491911889:179207..179378Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:179207..179378TCONS_00068111-exon-scaffold_48-1510915933:179207..179378Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:179207..179378TCONS_00068111-exon-scaffold_48-1575043694:179207..179378Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:180569..180637TCONS_00068111-exon-scaffold_48-1491911889:180569..180637Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:180569..180637TCONS_00068111-exon-scaffold_48-1510915933:180569..180637Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:180569..180637TCONS_00068111-exon-scaffold_48-1575043694:180569..180637Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:180834..181126TCONS_00068111-exon-scaffold_48-1491911889:180834..181126Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:180834..181126TCONS_00068111-exon-scaffold_48-1510915933:180834..181126Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:180834..181126TCONS_00068111-exon-scaffold_48-1575043694:180834..181126Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1491911889:181330..182013TCONS_00068111-exon-scaffold_48-1491911889:181330..182013Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1510915933:181330..182013TCONS_00068111-exon-scaffold_48-1510915933:181330..182013Clytia hemisphaericaexon
TCONS_00068111-exon-scaffold_48-1575043694:181330..182013TCONS_00068111-exon-scaffold_48-1575043694:181330..182013Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:169855..182013 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.788273	1.48537	0	0	0	0
Blast
[Close]
BLAST of TCONS_00068111 vs. Swiss-Prot (Human)
Match: MAMC2 (MAM domain-containing protein 2 OS=Homo sapiens GN=MAMDC2 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.069e-18
Identity = 66/220 (30.00%), Postives = 100/220 (45.45%), Query Frame = 3 
Query: 1017 KGGWNRVLMNIKKTPGTICTITWRASQSLSPEGRLNLDDITMYNRACPKPNEVEIPSAASCTLEGNTCEW---KETGLKWSYSNKTTPTLYTGPDLYYGKKVGPKYAFLEASGSNFPSVKGVLTSRKLKGDT-DNCFRMMAYMYGEDLGTLQVSFKSPNVTDK-VVYERKGDQGKRWFEAFVTIPANTETQIEIKGVTGTGPRSDIAIDDILVEPGNCDE 1661
            +G W +  +  KK P     +     +S    G + LDDIT+   +C    ++  P    CT E + C +   K     W      TPT YTGP   +   VG  Y ++EAS   +   K  L SR L+G +  +C     +MYG   G L V  K    +++ +++ R+G+Q   W  A +      + QI  + + G   RSDIAIDD+  + G C E
Sbjct:  451 RGVWMQAEITFKK-PMPTKVVFMSLCKSFWDCGLVALDDITIQLGSCSSSEKLP-PPPGECTFEQDECTFTQEKRNRSSWHRRRGETPTSYTGPKGDHTTGVG-YYMYIEASHMVYGQ-KARLLSRPLRGVSGKHCLTFFYHMYGGGTGLLSVYLKKEEDSEESLLWRRRGEQSISWLRALIEYSCERQHQIIFEAIRGVSIRSDIAIDDVKFQAGPCGE 666
The following BLAST results are available for this feature:
BLAST of TCONS_00068111 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAMC22.069e-1830.00MAM domain-containing protein 2 OS=Homo sapiens GN... [more]
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