TCONS_00068114 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068114
Unique NameTCONS_00068114
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3680

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068114 ID=TCONS_00068114|Name=TCONS_00068114|organism=Clytia hemisphaerica|type=transcript|length=3680bp
gtgCTTTGTCTGGAAAAGACATCTTTTTATAGATCAATGTGGCAAAgtat
ttattgaaatttttgacactCCTTGTTTTCAAATCACGAAGACATTGAAT
GAAGAAAGATGAAGGTGCTGGTGTTTGTAGCCATTGTCTCTTGTTTAGCT
GGAGCGAAAGGGTATGTTGACCAATACGACCGGCGTTTTATGAGAAGATT
GGCAGCTTTTGACGATGATGTTGAGCACATACCTGAATACGACTATCAAA
GGAGTCCAAGGAAAACGTTTGAGAGTGATGATAATGGAAATTATGCATAC
GATATTCTAGACGATCAAGATGAAGGTGAGAATGAAGAAAGAGCAAACGA
AAGAAGCGTTTACCGAAGAGGAGGATATCGAATTGTGAATGATGACACCA
GACAACAACGACGATATTCCTCCATTCCCGATCAAGTAAAAGATTACTTG
ATGAGAAGACGGTACGAAGATGTGAGGACCGATCGCCGACCATATTACCA
ATACAGTGATGTCGAGAGTGAAGATGGGCTTACATCAGACTATTACGATG
GAATaccatttgaaaaaagaaacaagGCAAACTATGAAAGCCTTTTTAAT
ATGAGGGACATTGAAAGAAACGCAGCAATAGAAGACAATAAGCCAAAGAC
GGAAGTGATGGTGAAGAGAGCCAAGGTGGATGATGGTGGTGAAAATGGTC
CTTTTTCATGTGGCTTTGAAACAGATTGcacgaaatattttcaattcgtC
GGAACAAAACTACAGTGGAAGAAAAGCACTCGAATTCCTGATCGGAAAAG
TTCACATGGTGCATCCATGGAGGTGGACGTCAAGAAGACGAACACGAGAA
AAGATCGTGCTTCCATGTCGTACAAATTCAACGTACGTCACGCGGCACAA
TGTAATGAGTTCTACTACAACATGTTCGACGAGGAAGGATGTGACGTCGT
CAGATTGTTGGTCACCATGCAATGTGACGGAGAAAACAAGCCAACTGAAT
TGTTCAGAAAAAGTTGGAATGAAAAGGGTGGTTGGAATCGTGTGTTGATG
AATATCAAAAAAACACCAGGAACTATTTGCACTATCACATGGCGAGCATC
TCAAAGTTTGTCACCAGAAGGCAGGTTGAATTTGGATGACATCACAATGT
ACAACCGCGCATGTCCAAAACCAAATGAAGTGGAGATTCCAAGTGCAGCT
AGTTGTACACTGGAAGGGAACACGTGTGAATGGAAGGAGACTGGGCTCAA
GTGGAGTTACTCCAATAAAACCACGCCTACTCTTTACACTGGTCCTGATC
TCTACTATGGAAAGAAAGTCGGACCTAAATATGCTTTCCTTGAGGCAAGT
GGAAGCAACTTCCCATCCGTCAAAGGTGTATTGACAAGTCGCAAGTTGAA
GGGAGACACTGACAACTGTTTCCGAATGATGGCTTACATGTATGGTGAGG
ATTTGGGTACACTACAAGTGTCATTCAAAAGTCCAAATGTCACCGATAAA
GTGGTGTATGAGAGGAAAGGCGATCAAGGCAAAAGATGGTTCGAAGCTTT
CGTAACCATTCCAGCTAATACTGAAACCCAGATCGAAATCAAAGGGGTGA
CAGGGACTGGACCTCGTTCTGATATTGCCATTGATGACATTCTGGTTGAA
CCTGGAAATTGTGATGAGCAAGGAGAGCTTGTTGGGTGTTCATATGATGT
TGCTGGTTCAAACGATCTATGCCACTTCACTGGAAACCCAAACTGTGGAG
AGGTTGAAATCAATATCCCTAATCTTGGTGAGGCCAAGCAGAATCGTTTG
GTACAAATtataccctaccaagccaaagattttgaaatttcatttgatGT
TCAACCTGGCGATAAATCTAGCGGTTACGCAAGTTTAGTACACTTGACAA
CTGGATCAGATTGTTGTGGAAGGGGTTCACGCCATCCAGCCATTTATTTC
CATCCCAACACACTGAGAGTGATGGTGTGTACGACCGAAGCTGTCGGAGG
TCATAGATGTATCATAATGCCAAGAGATATCCCCACTGGTCAAACAAGTC
ATGTTCAATATACTTTCAAAGAAAACCCATCGACACCAGGCCGCGGAGTT
TGTGAGTTATTTGTGAACGGACAAAAGATTGGAGCTCTTAATGTGTACAC
AGCTGAGTTCCCCAACGTCAAGATATTCTCTGGAGACATACAAAAGCAAC
CAGTTAACAACAAACACATTATCACTAATTTCTTCTACAAGAATACAGCA
AAAGTGGAATCATGCACGAAGACATGCACTGcaaacgtcatcaaaacaaa
NTACTTGTAGGTTCACGCCATCCAGCCATTTATTTCCATCCCAACACACT
GAGAGTGATGGTGTGTACGACCGAAGCTGTCGGAGGTCATAGATGTATCA
TAATGCGAAGAGATATCCCCACTGGTCAAACAAGTCATGTTCAATATACT
TTCAAAGAAAACCCATCGACACCAGGCCGCGGAGTTTGTGAGTTATTTGT
GAACGGACAAAAGATTGGAGCTCTTAATGTGTACACAGCTGAGTTCCCCA
ATGTCAAGATATTCTCTGGAGACATACAAAAGCAACCAGTTAACAACAAA
CACATTATCACTAATTTCTTCTACAAGAATACAGCAAAAGTGGAATCATG
CACGAAAACATGCACTGcaaacgtcatcaaaacaaaggtcaaCAAAAAGG
AAGTCACTGTCGCTAAATACAACAAAACGCAATGTCCGGTATCTTTCGAA
AATGAAATCGAAATCCCACTGTCCATTCGCAACGGACGTTTGGCCTGCAT
GGCGTTCGATTATCTGATTGGACAAAACAAGAAGGGCAATGCTGAATGTG
AGATTAAAGTGCAATACCGTGAGTTCGTTTCCAACAGATGGGTGGCTAAA
CCTGTTCACACGTTCAAAGATAAATTCGAGTTCAATGTATGGATGCCCTT
CAGACGTGATTTTGATGTCATCTTGGAAGAAAACAAGAAATACAGGATTG
GTGTGATTCACAAATTGACCGATCAATGTCCAGAGATTTCTTTTGCCAAC
ATGAAACTCTTGGATGGACCTTGCGCTTTACCTGAAACTCATCAAGAACA
CTGATCAATGGAACACGGTACATCACTGAAACTGATGTGAGCAGGATCGT
AAATGGTAAATGGAAAATGGAAAACTTATAACTTAAATAGGATTAGAAAC
TTATAATCGTAATAGTGTTTCAGCGAGTGATAAAAGTAGTTGTTTACTAT
AAGAATCATAAGCCAATGCCACGagtttcaaaattatttcaaaaacatta
acCTTCCCTtcgagatttttcaaaaaacaggCCCTGCGGAAGCGGaaaga
ctggggagacttcagccacTTTTgattaaattagattttttttctcaaat
ttctagcgaatttaattttattatgagccttcagcctccccacttttacg
gtcgttccgccgggcctgaaaAAGATATTTagggaattaatttttctttt
ttcgtgGTTTTACAACCCTAACACAGGCTTAAAAATCGGAACGGTGTTCG
CCCTGAAATTATTCATTCGACTATTCATTatatcatagtataagaaagcc
gcggctggaatatgtaccgcattgtcttttcagttaattgctgttccatc
tctgtctccgagctttataagaacatcgag
Run BLAST on NCBI

transcript from alignment at scaffold_48:170363..182013+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068114 ID=TCONS_00068114|Name=TCONS_00068114|organism=Clytia hemisphaerica|type=transcript|length=11651bp|location=Sequence derived from alignment at scaffold_48:170363..182013+ (Clytia hemisphaerica)
gtgCTTTGTCTGGAAAAGACATCTTTTTATAGATCAATGTGGCAAAgtat
ttattgaaatttttgacactCCTTGTTTTCAAATCACGAAGACATTGAAT
GAAGAAAGATGAAGGTGCTGGTGTTTGTAGCCATTGTCTCTTGTTTAGCT
GGTAAGGTTTTTTGTATACATACATTCGCGTTATTGAGTTTCAATCCGAA
GGCAAACAAAAGTGATGTCTTAAAATTCTTTCTTTGCTTCGCGTtttaca
tttttcgaatttctgGCGGTAAATGTAACAACCAATCTAGTGTTTGTTTG
CGAGCCACGCAACTTACGTCGAAAATGAATACCTTCAAATCCTACATAAG
GGATTCGAATCTAGCTTTGCGTCACGAGGCTTGCAtttctattttaatga
aaactttaaaaaacgtttaaaaactgTTACTGGACAGCCCAATACAAATC
TCAAACAATTTTGATCCCTACAGGAGCGAAAGGGTATGTTGACCAATACG
ACCGGCGTTTTATGAGAAGATTGGCAGCTTTTGACGATGATGTTGAGCAC
ATACCTGAATACGACTATCAAAGGAGTCCAAGGAAAACGTTTGAGAGTGA
TGATAATGGAAATTATGCATACGATATTCTAGGTAAAAATACTTTACAGT
GTTAATGCCCAGTTAAATACAGTTTCATGAAATACAcgcctttttttata
aaaatagtgTACTtcggatgagggtcaagtattcttaaaaaattaccaaa
attgagggtaaaatattcttaacgtattcttacttgtttagacttgactt
ttatTCATAAACACGAGTTTAAGACTTTTGAGTGCACATTGGGagctaaa
attatatttctgcctcaaagtttcNAGACTTTTGAGTGCACATTGGGagc
taaaattatatttctgtcTCAAAGTTTCAAATTAAGTTTTaacaaaaaac
ccatttttttctgttaaccaaatacttTAAAATGCCTGTATTCTCATTAA
ATTCTGTCAAACTTACCctggagggtattcttagggtattcttacgattt
ggccaattttcaccctgatgtTGTGATAGAAGATCTTCTTATAATAAAAG
CGTGCAAATGGATAGAACAAAATGAGAAATGACAATTTAATAACCCGTGT
GAGGTACTAGGCTTGCGAGCTTAGGgagggaaaaaaggaaaattttataa
attttacaaccttgattgggacaaatttgaccaaattttgatcattCCGG
GGgctaaaaagtttaaattttcctgttttccgacccttaatgggactgaa
ataggattttctgatttttacaaTCCTTGGCAtagtgggactttggaagt
ttaaaaaaggtacccttaaaaGGGCAGCACATATCCGTACCCTCCATAAT
TTAATAGTCGAATAAAATTTCTTATCTTTATCTCTTGACGGGATCAGATC
TCCGTTCAATTTCTTACTAAAAACCTCAAGACTTGATTTGCGCTAGTCAA
GAGCAAAAAAATTAGTCAGTGactcatagtgtcctcctggaAGGGTCAGT
TCCCTCAAGGAAAATATCATTGCCAGGTTTTGACCCCCtgtcctgaaaat
gaaaaaagtcttTGCCCTTCTATGGAAAGTTCAACCTCCCACCCTTTTTT
ACACACGCCCTGATTTTGAAAACTGTCACCGTAACATGCTCGTCTGAAGA
GTGTTTCTCAAAAACTATTGTACCGGTTCTTCTGAGAAGAGTGGTAATAA
TGGAACGATATTAGTGAACGGAAAACTTTTGacgattttaaaaaaattga
gaatattttacactTATATAAGGATCAGTCAGTCTCCAAATAACAGCGTA
CGAGAAAGCAGGTTCAAACTGACCATCGTGTTCTTCTTCCATCACAGACG
ATCAAGATGAAGGTGAGAATGAAGAAAGAGCAAACGAAAGAAGCGTTTAC
CGAAGAGGAGGATATCGAATTGTGAATGATGACACCAGACAACAACGACG
ATATTCCTCCATTCCCGATCAAGGTAAGGATTTAATCACGCCACATTCAA
ACTCTAGATCAAGGAAGAAAATCTGCTATCCTGTAACACCTTTAAATCTT
TTCATGTTTTACAATCATAGTAAAAGATTACTTGATGAGAAGACGGTACG
AAGATGTGAGGACCGATCGCCGACCATATTACCAATACAGTGATGTCGAG
AGTGAAGGTAAAAACATCTACTTTCCTTTTTCTATTAAAAATTGGATCAA
AAANATACAGTGATGACGAGAGTGAAGGTAAAAACATCTACTTTCCTTTT
TCTATTAAAAATTGGATCAAAAACTCTAAGTCAATGACCAAGAACAATTC
CAAAAATAAAGAAGCGATCGAGAAAACTACACCCTACAAAGACTGAATAT
ACTGTAGATCGGAGCTCCGTTGAATGTTTTCCTGGTCGCTTAAGAGAATT
TTTCGGCTTCCTTCCTTTTCGTAACTCAACTCTCACCGTCCCTTCGAAGT
TTCAGTTATGGATATTCGACCGCCATTTCAAATATCACCTTGAAAAAAGT
GTGAGGTCAAAAGTTTATGTATTCAGGAGTAAGCCACTTTGGCTGCAAGT
TTTTAGCTCAACCTAACGATGATAAGTTCTTATTGATTTCTTTTTACAAG
TAGATGGGCTTACATCAGACTATTACGATGGAATaccatttgaaaaaaga
aacaagGCAAACTATGAAAGCCGTAAGTAATTTACGCAGTGCTAAGGGTT
TGCGATTGTAACGTCCCAGTTTCTTCATATGGTTTGAAGTTTCAAGCATC
GGGTGTTTTGATTAAGGTTGAAGGGCGTCTGCTTACCGAATTTTGCAACG
CTATGCATTTAAAATCGTTGCTTTTAAAAAGCATTCTATAATCAAACTCG
GACATTTTACCGAGAGTGTCAAGCATCTTCCAATGAAAGATTTCTTTGTA
AATGAATCATCTTTTCCATTTCATTCAGTTTTTAATATGAGGGACATTGA
AAGAAACGCAGGTGAGTCAAAATTCTTCCGTATAATTATTTCctttattt
cctttttcaacaaccctcgaattttcaaatgaaacaatTTACCGCTACTT
ATCTGAGGCCGAAAATATTACATGAAAGTGCATTAAATTTtgtattgaaa
acaaatttatcaaacaaTTTCTGCAAGGTCTTTCGTAGTTTATTATATCA
TCATTCCTAAAACATACCGGGAACATACCATTAAAAACATCAATTCTAAA
AGAACCTTTGTCCTCAAATTAAACAAGAGCAGGATAAAGAGGCTAAAGAT
GCCAAAAAAAAGAGAGcttaaagaaaacttttttgattaagCAATAGAAG
ACAATAAGCCAAAGACGGAAGTGATGGTGAAGAGAGCCAAGGTGGATGAT
GGTGGTGAAAATGGTCCTTTTTGTAAGTTGACTTCTTGTTCATTTTATGT
ATCGGTATCAAGGTATGTTTGTTAGGTGAGCAAAGATATATGACTTCATC
TATATCAGAACACACTACGAAGCCTGAATACTGTCCATAGATATCTAACA
CTAGGCGCAGCTACTCTGTTCCTAGATGAAGAAAAACAATATGCAATCTT
AGCCGAGTTGAcgtaaatcaatcaatcaatcaatcaatcacatTACAATA
TATTCCTGCCGTTTCAGTTTCTAATTGCCTGTACCATACTGTGGTCTACT
CAGCAAaatggcgcattattttgcttcaactgGGGTCAACTGGCATCTCT
TGAGAATGACAGAGTAGCTTTATCTTTTGTTTAGTATAAGATAACTGTGG
TACTGTACTGCACTGACAGAAAGGCCAAAAAGGACATTTATTTTGGGATT
TCTTGATgataaatttttctttcataatCTACCTATGACAGTATCCTCAT
AAGTAAGACTACAGTCCCACTCCACCCTCTTTATATTCACGAGCCTTTAG
ATGGATATTTCTTTTCCAAATACTCTTGCAGCATGTGGCTTTGAAACAGA
TTGcacgaaatattttcaattcgtCGGAACAAAACTACAGTGGAAGAAAA
GCACTCGAATTCCTGATCGGAAAAGTTCACATGGTGCATCCATGGAGGTG
GACGTCAAGAAGGTACGCATTGTGAAATACCCAGCCACGTCCCCTGTGTA
CTATCGGCTTTTTATGCTTGCTGGTAGCgccatcagtaacgtaaataaag
cctgggatataCAGGCACGAGGTTCTGTAATACCATATAGGTATCGCGGG
GTTGGGGATTTTAAGTACGGGTAAACGACAATTATTCGTGgacgttaatt
tttatttttgggcgTTGATTTTTATTTGTGGGCGTTAGTTTGAACACCAG
TAAAACAGTggaataaaatagaaaaaaaaatagaagagCTTTTAACTTGC
TTTGCCGGGTGTTTGAATGACTGTTTATAATTAAATTATTCGCTGTTCAG
CGGAATTTACCAAACTAGAACTCTTTTCAGTCCTCGAGAATAACTAAAGA
TAGTTCAGCCTGAAAGTCTATACACTTGACAAACCCGTCAAATATAAATA
TCTTATTTCGGAGTGGCCAGAAAATCATATTTTTACACATTCAAAATCTG
TTGAATACCTTGTGGAATGTACAATAAAGAATCTTGCAATAATACACATA
TAATACACACTTTACTTTTTCAGACGAACACGAGAAAAGATCGTGCTTCC
ATGTCGTACAAATTCAACGTACGTCACGCGGCACAATGTAATGAGTTCTA
CTACAACATGTTCGACGAGGAAGGATGTGACGTCGTCAGATTGTTGGTCA
CCATGCAATGTGACGGAGAAAACAAGCCAACTGAATTGTTCAGAAAAAGT
TGGAATGAAAAGGGTGGTTGGAATCGTGTGTTGATGAATATCAAAAAAAC
ACCAGGAACTATTTGCACTGTGAGTTGAGTGTTTATACTAAGAAAGAGTG
CTAGCATCTATACAGCGTGGAGTGCAccatttaaaatctttttggTCTGA
AGCCTATATTACTATAGCCCCATCGCGGGTACCATCGACTTCGCTAATTC
GAGCAAATGGGGAATCTAATCACTTTCGACTTACAAGATATATCCCAAAT
ATAGAAATTTATTATCATATTGGTTATTAATAAGACTGTGTtcgagtttt
caaaaatatccaGGTGGTGCTTAAACAAATCAAAGGAATAGTAATTTCGT
TAGCAGCAAAACGTATTGTAACCACACCAAACCAACTTCGTTTAGATCAC
ATGGCGAGCATCTCAAAGTTTGTCACCAGAAGGCAGGTTGAATTTGGATG
ACATCACAATGTACAACCGCGCATGTCCAAAACCAAATGAAGTGGAGATT
CCAAGTAGGTTAATGTACAACAATACCAATACAATCTCATCTCCACTGTA
AACCTTCTGATTTATGATGGGGCGtataaaagtttatttgatGACATATA
GTAGATATAAAAAGACTAAAACACCCAAAATCTCTCAAGGATTATGAGTT
TGTAAAAGTTTATTGTCTTGGCTCCATTCTATAAGACTCGActttaattt
gaaatattacgcAGAAAAAATGCAAGgtcaaaagtgttttcggtACTTTG
AGTTCTAAACCCTTCCTGTACCGGTGTCGCTATGCCGACACGGGGTATGG
GAAAAAGgcgaattttgattttgaaatcgatttctttttttaaggttACA
CAAGTATATTACAAGTACTTAATGAATTAACAGGATCgaatttcatgaaa
ataactttattgaaattttgaccgtttttggACAATATTCTTATTAAGTC
ATTAGGACAAGAAAGCACCAAATTTGTATATTGTACCAGATTGTATGTCT
TTCCAGGGGtgggggcactccaggtaagtgacctaccggacgtgcgaccc
ttaagggtaggtttttttggactttggaaagcgcaatgtaagggttgatt
tgtgagcaagtgggaaaaagggcactgtaagggtgtaaaatttgagtaaa
taccaaattttgaggtaaaatttgagaaatttcaaaaaattttcgaaaaa
ttgcactataaaggtcgattttcagccaaatttttcctgcactgtaaggg
tccgattttagagacttgatttttggccgaacgtacggtcgttttcaaaa
tcgagtgcccccccggaTGTCTTCCAAAGGAACCCATCGTTTCATTCACA
AATAGAACAGGATACACTAGACTTTTACGATGAAATACCACATGAAAAAG
AAACAAggcaaaatttacattttttgatcAGATTACACAGTGCAAAGGAG
GCATGATCATAATCCGccaaattcatttttattttatacccAAGACAGTT
TGTGAAATATAATATGGTTAAATACACTTGTAGCTTGTTTGATTGTTAGA
CTGGTCCACATTTCGCCATTTGTTAATCAAACCTTTCTCAAAGAACCCCC
TTATATTTTTAGCTTTGGTTGGAAAACGTCTTGGGTGACATCAGCATAGT
TCGGATTCGACAATATTGTAATGGAAGGATTTTGACCACCCTCCTTgtca
ttcaatatcaaaaaagtccaaaaaaagatcattttgacATTAATACCTCT
TCCAACAACAGTGAAATCATCCTAAAAGGTATTCTTTCGATTCATTTCAG
GTGCAGCTAGTTGTACACTGGAAGGGAACACGTGTGAATGGAAGGAGACT
GGGCTCAAGTGGAGTTACTCCAATAAAACCACGCCTACTCTTTACACTGG
TCCTGATCTCTACTATGGAAAGAAAGTCGGACGTAAGTTGGATAATATTG
AAGACATGTACACATTTTttcatataagaacaaactaagaaCATAAGCCT
TTGATTGCCAAAatattaggaacattttaaggctttgcagaccataaaat
acctattttcttaggagaattgacaaaaatactcataaaatggtgaaaat
aagaacatgttaagaacattttgaggctttaaaatcaaaaagttaagaac
atccaaaggttctaacaattttggatgttcttacaatAAAAACGTGTAAC
CTGATGAACCGATACCTATCAGTAACCCACTTGGATCTAAAACACATTGG
GTTTTGGACTCGATCACTGAAGTATACAAATCTTTAACACCACTGTTTTT
ATTTCACACACTGTATCAATGTATCGCAAACATAAGAAATACTGGTAAAA
ACTTTCCATACCAAACAAACTTATTTAAAATGTTTCTCACATTTTACTAC
AGCTAAATATGCTTTCCTTGAGGCAAGTGGAAGCAACTTCCCATCCGTCA
AAGGTGTATTGACAAGTCGCAAGTTGAAGGGAGACACTGACAACTGTTTC
CGAATGATGGCTTACATGTATGGTGAGGATTTGGGTACACTACAAGTGTC
ATTCAAAAGTCCAAATGTCACCGATAAAGTGGTGTATGAGAGGAAAGGCG
ATCAAGGCAAAAGATGGTTCGAAGCTTTCGTAACCATTCCAGCTAATACT
GAAACCCAGGTATCATTACTATGAAACTCTATATTCTTAACAGAAAACAG
TGTTAAATTGGTTTGTTGGTTACAAAGAAAGTGGGTAAAAGAATTTTTCA
CCCATAGCTACAGACGATACTTTAATAGACATTCTCCTATTGCTTATAGA
TCGAAATCAAAGGGGTGACAGGGACTGGACCTCGTTCTGATATTGCCATT
GATGACATTCTGGTTGAACCTGGAAATTGTGATGAGCAAGGAGAGCTTGT
TGGGTGTTCATATGATGTTGCTGGTTCAAACGATCTATGCCACTTCACTG
GAAACCCAAACTGTGGAGAGGTTGAAATCAATATCCCTAGTAAGCTCATA
GAGTcaatttaaagttttctttccAAACTTCTCAATGTGCAACTTTTTTG
CAATACTACAGTTCCATCGAAAACCTGAGATATCTGGGTATGTAGATTTC
TTGGAAAGCGATGATCAAGTTTAATGAATATAACAACCATAGTGTCGTTG
GACAGCTCTGCTACAAATCTACAAGAAGCAGCGGACTTCTTTTCCTTCTA
TCTTTTATGGGGTTAATTACCAACAGTGCACAGTGCGACAACCATTGAGA
ACGTAACTAAGGTTTGAAACATTATGTTCTTATCATCAATTCACAGATCT
TGGTGAGGCCAAGCAGAATCGTTTGGTACAAATtataccctaccaagcca
aagattttgaaatttcatttgatGTTCAACCTGGCGATAAATCTAGCGGT
TACGCAAGTTTAGTACACTTGACAACTGGATCAGATTGTTGTGGAAGGGG
TTTGTATTCATTACAACGATAAACAATTTTCCCGATCGCAGGACATACCC
ATGGTTATTAGTTTACCCCATCTTTCGTATCAGTTTTACAATTTATCTCT
TATGTCCTGTACACGACTCTTTCAAAGCAGCCCCTCCTCATTCTGAAAAT
GCATGAAATATGAACAATCAACGACTAGTATAATTATGCGTTCTTTACTT
GTAGGTTCACGCCATCCAGCCATTTATTTCCATCCCAACACACTGAGAGT
GATGGTGTGTACGACCGAAGCTGTCGGAGGTCATAGATGTATCATAATGC
CAAGAGATATCCCCACTGGTCAAACAAGTCATGTTCAATATACTTTCAAA
GAAAACGTAAGACCTTAAGGATATCTGTACTTAAGTGTTTTTGAAGTATA
GAAATTAGATCTAATAATTATATAGGAAAGGGGTCAATATGAAATTGATA
ACACGAGGTTCGTAGATAATTCGCCGTTTGCAGTGTAAAAATTAAACCCC
TGATTACAATTTCATAGGCTCATCATCTCAATTTTTCATCATAGCCATCG
ACACCAGGCCGCGGAGTTTGTGAGTTATTTGTGAACGGACAAAAGATTGG
AGCTCTTAATGTGTACACAGCTGAGTTCCCCAACGTCAAGATATTCTCTG
GAGACATACAAAAGCAACCAGTTAACAACAAACACATTATCACTAATTTC
TTCTACAAGAATACAGGTAAGGCTGGTCATCGCAAAGACATAGTGTTTTT
TCTTGAGTTGAAAAAAATGTCCCCTGAGATAAGCTTCGAAAAAAGACCAA
CTCTACCGACTCAAATTCTAATCGTATTCAATTCAAATGCAAATGTTGAA
GAACTTTGTAATAGAGGGAAGGGTGTTGCCTGACATAATGAGATTCAGAA
ACCTAAACGTGTACCTGTACTGTGTTATGAATCGCAGCGATGTATATTTg
atgaagatgatgattttctacGAGGTCAATAAATTTGTCAATGTAAACTT
TCGAATCTCTCTTTCTCTCATCAGCAAAAGTGGAATCATGCACGAAGACA
TGCACTGcaaacgtcatcaaaacaaaNTACTTGTAGGTTCACGCCATCCA
GCCATTTATTTCCATCCCAACACACTGAGAGTGATGGTGTGTACGACCGA
AGCTGTCGGAGGTCATAGATGTATCATAATGCGAAGAGATATCCCCACTG
GTCAAACAAGTCATGTTCAATATACTTTCAAAGAAAACGTAAGACCTTAA
GGATATCTGTACTTAAGTGTTTTTGAAGTATAGAAATTAGATCTAATAAT
TATATAGGAAAGGGGTCAATATGAAATTGATAACACGAGGTTCGTAGATA
ATTCGCCGTTTGCAGTGTAAAAATTAAACCCCTGATTACAATTTCATAGG
CTCATCATCTCAATTTTTCATCATAGCCATCGACACCAGGCCGCGGAGTT
TGTGAGTTATTTGTGAACGGACAAAAGATTGGAGCTCTTAATGTGTACAC
AGCTGAGTTCCCCAATGTCAAGATATTCTCTGGAGACATACAAAAGCAAC
CAGTTAACAACAAACACATTATCACTAATTTCTTCTACAAGAATACAGGT
AAGGCTGGTCATCGCAAAGACATAGTGTTTTTTCTTGAGTTGAAAAAAAT
GTCCCCTGAGATAAGCTTCGAAAAAAGACCAACTCTACCGACTCAAATTC
TAATCGTATTCAATTCAAATGCAAATGTTGAAGAACTTTGTAATAGAGGG
AAGGGTGTTGCCTGACATAATGAGATTCAGAAACCTAAACGTGTACCTGT
ACTGTGTTATGAATCGCAGCGATGTATATTTgatgaagatgatgattttc
tacGAGGTCAATAAATTTGTCAATGTAAACTTTCGAATCTCTCTTTCTCT
CATCAGCAAAAGTGGAATCATGCACGAAAACATGCACTGcaaacgtcatc
aaaacaaaggtcaaCAAAAAGGAAGGTGAGAGAACAGGTTTCCCTTTACT
TTGGAGCTACATGTTATATTGGTGCTCGAgaattcaaaatgaaataaaga
tACTAAATTCAAATTGCGCATTTCCATGAGCTTagatttgaattgaattt
atGTGATTCGATCCAGGGTGATAGATGTTGtaaagaaagtttcaataatT
CTGCACCATTTTCGTTTATAGTCACTGTCGCTAAATACAACAAAACGCAA
TGTCCGGTATCTTTCGAAAATGAAATCGAAATCCCACTGTCCATTCGCAA
CGGACGTTTGGCCTGCATGGCGTTCGATTATCTGATTGGACAAAACAAGA
AGGGCAATGCTGAATGTGAGATTAAAGTGCAATACCGTGAGTTCGTTTCC
AACAGATGGGTGGCTAAACCTGTTCACACGTTCAAAGATAAATTCGAGTT
CAATGTATGGATGCCCTTCAGACGTGATTTTGATGTCATCTTGGAAGAAA
ACAAGAAATACAGGGTGAGTGCGGACCGATATATAATTATCTCCATTTGC
ATATATTCGCTTGTTTAGACATAAGAACAATATTCaacttaatattttta
tttctatattCAATCTTAGTAACGGAGGTCTGTAATAGAATTGACTTTTC
TCCCTTCCATGCATCTTTGAATTATACCTCTCGACCGAAGCTATTCATCA
AATGACTTTTTCATTAGATTGGTGTGATTCACAAATTGACCGATCAATGT
CCAGAGATTTCTTTTGCCAACATGAAACTCTTGGATGGACCTTGCGCTTT
ACCTGAAACTCATCAAGAACACTGATCAATGGAACACGGTACATCACTGA
AACTGATGTGAGCAGGATCGTAAATGGTAAATGGAAAATGGAAAACTTAT
AACTTAAATAGGATTAGAAACTTATAATCGTAATAGTGTTTCAGCGAGTG
ATAAAAGTAGTTGTTTACTATAAGAATCATAAGCCAATGCCACGagtttc
aaaattatttcaaaaacattaacCTTCCCTtcgagatttttcaaaaaaca
ggCCCTGCGGAAGCGGaaagactggggagacttcagccacTTTTgattaa
attagattttttttctcaaatttctagcgaatttaattttattatgagcc
ttcagcctccccacttttacggtcgttccgccgggcctgaaaAAGATATT
TagggaattaatttttcttttttcgtgGTTTTACAACCCTAACACAGGCT
TAAAAATCGGAACGGTGTTCGCCCTGAAATTATTCATTCGACTATTCATT
atatcatagtataagaaagccgcggctggaatatgtaccgcattgtcttt
tcagttaattgctgttccatctctgtctccgagctttataagaacatcga
g
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042523XLOC_042523Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068114-exon-scaffold_48-1491911889:170363..170513TCONS_00068114-exon-scaffold_48-1491911889:170363..170513Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:170363..170513TCONS_00068114-exon-scaffold_48-1510915933:170363..170513Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:170363..170513TCONS_00068114-exon-scaffold_48-1575043694:170363..170513Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:170836..170994TCONS_00068114-exon-scaffold_48-1491911889:170836..170994Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:170836..170994TCONS_00068114-exon-scaffold_48-1510915933:170836..170994Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:170836..170994TCONS_00068114-exon-scaffold_48-1575043694:170836..170994Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:172260..172385TCONS_00068114-exon-scaffold_48-1491911889:172260..172385Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:172260..172385TCONS_00068114-exon-scaffold_48-1510915933:172260..172385Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:172260..172385TCONS_00068114-exon-scaffold_48-1575043694:172260..172385Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:172483..172569TCONS_00068114-exon-scaffold_48-1491911889:172483..172569Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:172483..172569TCONS_00068114-exon-scaffold_48-1510915933:172483..172569Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:172483..172569TCONS_00068114-exon-scaffold_48-1575043694:172483..172569Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:173016..173084TCONS_00068114-exon-scaffold_48-1491911889:173016..173084Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:173016..173084TCONS_00068114-exon-scaffold_48-1510915933:173016..173084Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:173016..173084TCONS_00068114-exon-scaffold_48-1575043694:173016..173084Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:173341..173373TCONS_00068114-exon-scaffold_48-1491911889:173341..173373Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:173341..173373TCONS_00068114-exon-scaffold_48-1510915933:173341..173373Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:173341..173373TCONS_00068114-exon-scaffold_48-1575043694:173341..173373Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:173704..173784TCONS_00068114-exon-scaffold_48-1491911889:173704..173784Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:173704..173784TCONS_00068114-exon-scaffold_48-1510915933:173704..173784Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:173704..173784TCONS_00068114-exon-scaffold_48-1575043694:173704..173784Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:174344..174474TCONS_00068114-exon-scaffold_48-1491911889:174344..174474Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:174344..174474TCONS_00068114-exon-scaffold_48-1510915933:174344..174474Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:174344..174474TCONS_00068114-exon-scaffold_48-1575043694:174344..174474Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:175036..175281TCONS_00068114-exon-scaffold_48-1491911889:175036..175281Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:175036..175281TCONS_00068114-exon-scaffold_48-1510915933:175036..175281Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:175036..175281TCONS_00068114-exon-scaffold_48-1575043694:175036..175281Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:175608..175716TCONS_00068114-exon-scaffold_48-1491911889:175608..175716Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:175608..175716TCONS_00068114-exon-scaffold_48-1510915933:175608..175716Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:175608..175716TCONS_00068114-exon-scaffold_48-1575043694:175608..175716Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:177013..177144TCONS_00068114-exon-scaffold_48-1491911889:177013..177144Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:177013..177144TCONS_00068114-exon-scaffold_48-1510915933:177013..177144Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:177013..177144TCONS_00068114-exon-scaffold_48-1575043694:177013..177144Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:177615..177871TCONS_00068114-exon-scaffold_48-1491911889:177615..177871Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:177615..177871TCONS_00068114-exon-scaffold_48-1510915933:177615..177871Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:177615..177871TCONS_00068114-exon-scaffold_48-1575043694:177615..177871Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:178012..178201TCONS_00068114-exon-scaffold_48-1491911889:178012..178201Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:178012..178201TCONS_00068114-exon-scaffold_48-1510915933:178012..178201Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:178012..178201TCONS_00068114-exon-scaffold_48-1575043694:178012..178201Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:178509..178661TCONS_00068114-exon-scaffold_48-1491911889:178509..178661Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:178509..178661TCONS_00068114-exon-scaffold_48-1510915933:178509..178661Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:178509..178661TCONS_00068114-exon-scaffold_48-1575043694:178509..178661Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:178867..179018TCONS_00068114-exon-scaffold_48-1491911889:178867..179018Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:178867..179018TCONS_00068114-exon-scaffold_48-1510915933:178867..179018Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:178867..179018TCONS_00068114-exon-scaffold_48-1575043694:178867..179018Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:179207..179378TCONS_00068114-exon-scaffold_48-1491911889:179207..179378Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:179207..179378TCONS_00068114-exon-scaffold_48-1510915933:179207..179378Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:179207..179378TCONS_00068114-exon-scaffold_48-1575043694:179207..179378Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:179687..179900TCONS_00068114-exon-scaffold_48-1491911889:179687..179900Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:179687..179900TCONS_00068114-exon-scaffold_48-1510915933:179687..179900Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:179687..179900TCONS_00068114-exon-scaffold_48-1575043694:179687..179900Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:180089..180260TCONS_00068114-exon-scaffold_48-1491911889:180089..180260Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:180089..180260TCONS_00068114-exon-scaffold_48-1510915933:180089..180260Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:180089..180260TCONS_00068114-exon-scaffold_48-1575043694:180089..180260Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:180569..180637TCONS_00068114-exon-scaffold_48-1491911889:180569..180637Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:180569..180637TCONS_00068114-exon-scaffold_48-1510915933:180569..180637Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:180569..180637TCONS_00068114-exon-scaffold_48-1575043694:180569..180637Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:180834..181126TCONS_00068114-exon-scaffold_48-1491911889:180834..181126Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:180834..181126TCONS_00068114-exon-scaffold_48-1510915933:180834..181126Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:180834..181126TCONS_00068114-exon-scaffold_48-1575043694:180834..181126Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1491911889:181330..182013TCONS_00068114-exon-scaffold_48-1491911889:181330..182013Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1510915933:181330..182013TCONS_00068114-exon-scaffold_48-1510915933:181330..182013Clytia hemisphaericaexon
TCONS_00068114-exon-scaffold_48-1575043694:181330..182013TCONS_00068114-exon-scaffold_48-1575043694:181330..182013Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:170363..182013 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	2.5225e-07	0	0.0611269	0	0	0	0	0	0	0	0	0.268867	0	0	29.5181	10.2582	0	0	0	0
Blast
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BLAST of TCONS_00068114 vs. Swiss-Prot (Human)
Match: MAMC2 (MAM domain-containing protein 2 OS=Homo sapiens GN=MAMDC2 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.441e-18
Identity = 66/220 (30.00%), Postives = 100/220 (45.45%), Query Frame = 1 
Query: 1024 KGGWNRVLMNIKKTPGTICTITWRASQSLSPEGRLNLDDITMYNRACPKPNEVEIPSAASCTLEGNTCEW---KETGLKWSYSNKTTPTLYTGPDLYYGKKVGPKYAFLEASGSNFPSVKGVLTSRKLKGDT-DNCFRMMAYMYGEDLGTLQVSFKSPNVTDK-VVYERKGDQGKRWFEAFVTIPANTETQIEIKGVTGTGPRSDIAIDDILVEPGNCDE 1668
            +G W +  +  KK P     +     +S    G + LDDIT+   +C    ++  P    CT E + C +   K     W      TPT YTGP   +   VG  Y ++EAS   +   K  L SR L+G +  +C     +MYG   G L V  K    +++ +++ R+G+Q   W  A +      + QI  + + G   RSDIAIDD+  + G C E
Sbjct:  451 RGVWMQAEITFKK-PMPTKVVFMSLCKSFWDCGLVALDDITIQLGSCSSSEKLP-PPPGECTFEQDECTFTQEKRNRSSWHRRRGETPTSYTGPKGDHTTGVG-YYMYIEASHMVYGQ-KARLLSRPLRGVSGKHCLTFFYHMYGGGTGLLSVYLKKEEDSEESLLWRRRGEQSISWLRALIEYSCERQHQIIFEAIRGVSIRSDIAIDDVKFQAGPCGE 666
The following BLAST results are available for this feature:
BLAST of TCONS_00068114 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAMC22.441e-1830.00MAM domain-containing protein 2 OS=Homo sapiens GN... [more]
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