TCONS_00068158 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068158
Unique NameTCONS_00068158
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length910

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068158 ID=TCONS_00068158|Name=TCONS_00068158|organism=Clytia hemisphaerica|type=transcript|length=910bp
CAATCATTTctcttttgatgaaaattcttTCTGCCGGGTACGAAATGATA
TTTTACCACTGCAGAGCAATGGAGGTCATTCGAAAGAAATTGGGAGGATT
GAAATCGAAATTAGACGAAGCAGAAAGGCAAGCAAATGCCACCGAAGATG
AACTCAACTCTATTAACGAAAAAGCTGATGATACGGAAGAGCAAGTGAAA
TTGGTTCAGGATAAACTGTCAAGCATCGAAGAAGAGCTAGACGATACAGA
ACGACGTCATGAGACGGTCTCACAGAAGTTGGTGGAACTAGAAGTACGAG
GTGACGAAGTGCAAAGACAGTACGGTGAACTGACCGCCAGAAGCGAAACG
GACCAAATAAAGATCGATGCGCTGGAAGAACAATTAAGTGAAGTCAAAAG
TAAAGATGAAGAACTCAGTGCAAATTATGAAACGatCAGTCAAGAGTTAT
CCGAAATAGAAGCCACTtatgatgaagaagaagaacgaTGCCAGGAAGCT
GATGTTCGCGTCAAAACATTGgaagaaaaattcattcaaCTTGGCAATAA
TTTGAGAAGCATGGAACGATATGAAATGAAATCCAACGAACGAGGAACAG
AAATTCAAGAGAAAATTGAAGAACTTGAAGCAAAATGCGCAGAGGCGAAA
GAGAAAGCAGAGCAATACGAAGCAAAGTCCAAAGAAATGGAAGATGAACT
CGAATCTTTAGAACAACAATGCCACGACGAAAAAGAGCGTTACTTTTCAT
GCAAGGGTGACTTAGAAAGAATATTGGAAGAAGTTCAAGgaatctaaaaa
aaacaaagtgattttttttggtttgtaGCACGTTAGCACAGATTTGTACA
TTGAGAATTATTACTGTATTTTGTATAATAGATATCCGAAACATATTTCA
TTTCACAAAT
Run BLAST on NCBI

protein sequence of TCONS_00068158-protein

>TCONS_00068158-protein ID=TCONS_00068158-protein|Name=TCONS_00068158-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
IISLLMKILSAGYEMIFYHCRAMEVIRKKLGGLKSKLDEAERQANATEDE
LNSINEKADDTEEQVKLVQDKLSSIEEELDDTERRHETVSQKLVELEVRG
DEVQRQYGELTARSETDQIKIDALEEQLSEVKSKDEELSANYETISQELS
EIEATYDEEEERCQEADVRVKTLEEKFIQLGNNLRSMERYEMKSNERGTE
IQEKIEELEAKCAEAKEKAEQYEAKSKEMEDELESLEQQCHDEKERYFSC
KGDLERILEEVQGI
Run BLAST on NCBI

transcript from alignment at scaffold_48:146876..156817-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068158 ID=TCONS_00068158|Name=TCONS_00068158|organism=Clytia hemisphaerica|type=transcript|length=9942bp|location=Sequence derived from alignment at scaffold_48:146876..156817- (Clytia hemisphaerica)
CAATCATTTCTCTTTTGATGAAAATTCTTTCTGCCGGGTACGAAATGGTA
ATTTACCCTTCTTTGCTATTATTGAAAACAAAATCTTTAATTTTGAAAGG
AGCTAAAGAGGGGTTAAACATTTTTGAAACAATTTGGGCGTTACACAGAA
TAACTAATCCCCTTTTCTTTCGCATGACTCAAAAATGTTTTAAGCGACAG
CCAGTATTTCGCTGACTAAAATTGGGACAACACTGTTAAAAATATTTCAG
TTTTCAAAAATTAGTTGATTTTTGGGATATTTGATATTAGACAGATAATT
ACTTGGAAAGGACTGCCTACTTCTTATGATCATAAGAAGACAAGTTGAAG
GGTAGACAGACATGTAGACAGACGGACAGACAAAAGCATCCTTATATGGT
GTTTCCAGAAGTTGAATAAGATTTCTTTCCTGACCAAGAATGACTTCTTT
ATCTGTTATCAATTGATTATGCTCTAAACTATGTAGTTAATGAATCCAGA
TATACCTGACCCTGGATTTTTTTAAAGTTCAGTCTGATTCCATATGCCTG
TGATTCTCCAGTCAAGAATAATGAGATTTCTTCTAAAGTCTAACTTATTG
AGTTTAATTGTCCAACCTCGTGAAATCGACGGAAGACACGGCGTTGACAG
GAAAGGACGTCAATGTGCTCCGCGAAGGAGAGTTTGGTACAGACTATAAC
GATCTGCTCAGAGTCCCATTCGATACCCACTGTTACTTATTTGCAATTTT
TACCGGTGAATTACTTTAGGCGTACAAACTTTTACGGGCAGAAAATTTAT
GACCGGATTTGAGGAAAAAATGTTTTTCGTGAGCATAAACTTTCGCGAAT
CGTTGGATAAAAATGAGAATTTTGGAATGAAAATTGCCTTAAAAGTGAAA
AATATTCATTAAATTCGCTTAAGACGTATGCTCTTCGACTTAAAAAGGTG
TTAAAGGATAACAATACGCCCAAAATTTGACATTTATTACGATTTCGAGG
TTTTATAGATTTTTCGCGAGTATAAACTTTCGCAAATTAAGAATTTTCAA
AGACATTTACTTTCGCGAAAAAGGCCAAAATTCGCGCAAATCGTGAAAGT
TTCTGCTCGCGAAAGTTTGTACGCCTAAGTACCTCTTTCATGATCGTTGT
GATCGTCTTCCCAATATTTTCATTTGTTTCTTGCAAACCCTTCTCTTGCA
GATATTTTACCACTGCAGAGCAATGGAGGTCATTCGAAAGAAATTGGGAG
GATTGAAATCGAAATTAGACGAAGCAGAAAGGCAAGCAAATGCCACCGAA
GATGAACTCAACTCTATTAACGAAAAAGCTGATGATGTGAGTGCATCATT
CCGTAATTTCTTACGGAATCTATCTTTATCGTGAATAATCAATAAAATTA
TACGATATCTATGAAGAAGAAAAATCTAAAGCAACACAAGTGACACTTTG
TGTCCATTTTGTGATTCCCTAGAATTAAATGCAGGGCTTTTCGTCTTTTC
GCGGGTGTGACCGTGTTGACGATTTTCCTTATCCACTATTTTTTTAAATT
TGGTGATTTATTTTATTGTCAGGGCCCACGCCATGAAATTGAAAGTTGCG
GGGCAATGAATATAGAGTCTAAGGAGGCGCAACCAAAAATTTTTACTTCG
CAAAATAGTTGGCGATGGCGTGGGCTCTGCTTGTAAGATAGCTAAACGTT
GTTTTTGAGGTTTTTCCAGTCTGTTTGTTTGCATATCGTCCATTTTACAG
ACGGAAGAGCAAGTGAAATTGGTTCAGGATAAACTGTCAAGCATCGAAGA
AGAGCTAGACGATACAGAACGACGTCATGAGACGGTCTCACAGAAGTTGG
TGGAACTAGAAGTACGAGGTGACGAAGTGCAAAGACAGTACGGTGAACTG
ACCGCCAGAAGCGAAACGGACCAAATAAAGATCGATGCGCTGGAAGAACA
ATTAAGTGAAGTCAAAAGTAAAGATGAAGAACTCAGTGCAAATTATGAAA
CGGTAAGAACTATTCGCCCGTGTTTATATTAGATCTATGCATAAAAATTT
CCTAATTTTTTTAAAAATTATTCTAGAACTAAATTTCTTAAATTTCAGAT
TGTAGGCGGATGGAAGGCCAAGTTTGTGGAAATTTAGGTAAAAATACCAA
AAGCATAATTATTGGAAATTGAACAAAGTTCTTACCCTGAGTATCAGAGG
TTGAGAGAATATTTCAACCTCTGAAGACCAATAATAGAAATTTTATCGCG
CATGTATCAATCTAATCACTGTAGAAAAAATCAAAGATGAAGAGCAAATA
TTACCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGCCCCCCCCCCCAGCAGTTTGCGTGATTGCGTGATTGGGACTTTTTTCT
TGCGTGATGGCGTGATTAGAGATTTTTTTGGCGTGATGGCAAAAATTTGA
GGCGTGATGCGTGATCTGGGCTATTTTTCGCTATTTTTAGCGTCATGACA
GATTTTAGCAATTTTCGTGATGCGTGATAGAGAAAATCTTTTTGCGATGG
CGTGATCAGGGGTGCCGCTGGNTTAGCAATTTTCGTGATGCGTGATGGAG
AAAATCTTTTTGCGCGATGGCGTGATCAGGGGTGCCGCTGGGGGGGCCTC
CTCTATCACTGACTCTTTTTAAAAAGCATTAATGACATTTTTGAGTTGTG
TTTTCAACGACGGGAATAAAGATATCAACTTTGAAATTCATCTAAGATCT
TGGATGGTCGTCATGGTTACCTTTCTCTGCGTTGATTGCGTGCTGAATAG
AATCTGGATTGGTCGGCACAGCGTCGATATATGATTTCGACCTGTGCTTT
TCACGGTACAAATTTTGGTTTTCCCAAAAAAAGTTTCCTTCAACTCAGCA
ATTTCGTACCCAGTAAAATATAATCTTTCAAAGGCACGGGAAGATGTTCA
GTTTAAGCAAAACTAGTAAGATCTAGCTGCAGCAGATTTTTTTTCCGTAC
ATGGACGGAAGTATCATCGACGGTCGGGAGTATCTCATCTTTGTTGTTTG
GTTTTTACCCATATTATAATAACATTACCCCCGTCTTTTGTGTCATCTTA
TAAGTATTTCCTAATTTTGTGTTCTGCTGTGCGAGTGTGGCTCAACGGAT
AGCGCGCTGTGTTTCTGATCAGAAACTCTTTCATTTGGTGGGTTCGAACC
CCGGTCGGGTCGATATTTCAAGGTTTCAGATAAGTTTAAGATACTTCCGT
CCGTCGATGATACTCCCGACCGTCAAGATGAGATACTCCCGACCGTCGAT
GATACTTCCGTCCATGTACGGAAAAAAATTTGCCTAGCTGCAAGCATACT
TTCATTAACGATTTGATTGCAATCATTTCGGTCTTTTTGTTTTTCAGATC
AGTCAAGAGTTATCCGAAATAGAAGCCACTTATGATGAAGAAGAAGAACG
ATGCCAGGAAGCTGATGTGTAAGAATGAATCTCTTCCCATATTTGAATTT
CTTCAAAATAATTCGAACCCTGTCTCATGGCCTCGGTGAAACTCTTCAGA
AAGCTTGGGAAATCATTTTGTCTCTGCTTAACTCTCAATATATCTTTGAT
CCGTCCGACTCTGAACCAAATCTTTGTGAACTGAATTTCTACCAACAGTA
TATAACTCTATTTAGTCGCGTCAAAACATTGGAAGAAAAATTCATTCAAC
TTGGCAATAATTTGAGAAGCATGGAACGATATGAAATGAAATCCAACGAA
CGAGGAACAGAAATTCAAGAGAAAATTGAAGAACTTGAAGCAAAATGCGC
AGAGGTAAAGATATAAGAAAAGTTAAAAAAATCCTTCCACCTATGCTAAC
CGGTCTCCCTAACTGAAATAAATGACTGTTCCCCATGATGTTTTACTTAC
TTGATTATTTCTATTTCGTCAGGCGAAAGAGAAAGCAGAGCAATACGAAG
CAAAGTCCAAAGAAATGGAAGATGAACTCGAATCTTTAGAACGTAAGTTT
TTTGATTTTTATAGACATTGGACTATAACAACTACAGTAAGACACTTGTA
CCAATTTTTTATGGCAAGAATCTATTTGAGGAAAATTATAGATATCAACT
CCTCCTTGGGCAACAAATCAAACTTGGCTTTAGAACACAATCCTTTTCCG
AGGACGACTTTGCCCAAATACACCAGTGAAACATTTTCACTTACTGAGGA
TTAAAACCTCAGCGTATGAAAGTATTTTCCTGACGGGGATGACTTAACTT
TATCACCAAATTTTCTTTTTTTGAGAAGTGTCGAGCATGTGGCATACTAG
TGGGTATTAGACAATTTCAAATATTTTGTTTAGCTATTGTTGAAAACAAC
ACAACCTTTTGTCTTTCCAGACCATTTTCTTCAAATCATTGACATTGACG
AGTATTATTGAATAACTTTTTGTTTGTTTTATCTTTCTTAGAACAATGCC
ACGACGAAAAAGAGCGTTACTTTTCATGCAAGGGTGACTTAGAAAGAATA
TTGGAAGAAGTTCAAGGAATCTAAAAAAAACAAAGTGATTTTTTTTGGTT
TGTAGCACGTTAGCACAGATTTGTACATTGAGAATTATTACTGTATTTTG
TATAATAGATATCCGAAACATATTTCATTTCACAAATCAATCTAATCTTA
ATCATTCCCTTGTTACCAAGGATGATTGCGAACTCCTATCAAGATGTCAT
CTTCTTCACTACATAATGTTTCGATCGAATCAGGCGACATACTATTGTCC
GCTTTTTATTTAGAGATATCCGCTATTTCGAATACTCAATAGATATCAGG
GGGATGAGCCGTCGTGTGTCATATGTTTCATGGTTCAAAAAAATAGTCTG
TGGCCGGAAAAAAAAGGCCGTTGAAAAAAGAAGTCAGAGAGAGAGGTCGT
CATTTGAAATAAAGCTCTTCTCGTTTTGATCATGATTTTCGGAGGTCTTT
TAAATTAACCTTTGTTTGCCCGTTCGTTCTTTTGTCTGTTACCATCTTTT
CTCGGAATTGGTCCATAATTATTTGCACATTGCACATCCAAAAAGTGACT
GGGCCCGATTTTCGAAAAAATAAAAATTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNATCTATTATAATTCCTTCGAGAGTCCCTAGAAACCAGAATGC
ATTGCATTTATCGAAAGCCGATATCGTCTATTTGAGAAGCATGGAACGAT
ATGAAATGAAATCCAACGAACGAGGAACAGAAATTCAAGAGAAAATTGAA
GAACTTGAAGCAAAATGCGCGGAGGTAAATATAAGAAAAGTTAAAAAAAT
CCTTCCACCTATGCTAACCGGTCTCTCTAACTGAAATAAATGACTGTTCC
CCATGATGTTTTACTTACTTGATTATTTCTATTTCGTCAGGCGAAAGAGA
AAGCAGAGCAATACGAAGCAAAGTCCAAAGAAATGGAAGATGAACTCGAA
TCTTTAGAACGTAAGTTTTTTGATTTTTATAGACATTGGACTATAACAAC
TACAGTAAGACACTTGTACCAATTTTTTATGGCAAGAATCTATTTGAGGA
AAATTATAGATATCAACTCCTCCTTGGGCAACAAATCAAACTTGGCTTTA
GAACACAATCCTTTTCCGAGGACGACTTTGCCCAAATACACCAGTGAAAC
ATTTTCACTTACTGAGGATTAAAACTTCAGCGTATGAAAGTATTTTCCTG
ACGGGGATGACTTAACTTTATCACCAAATTTTCTTTTGTTGAGAAGTGTC
GAGCATGTGGCATACTAGTGGGTATTAGACAATTTCAAATATTTTGTTTA
GCTATTGCTGAAAACAACACAACCTTTAGTCTTTCCAGACCATTTTCTTC
AAATCATTGACATTGACGAGTATTATTGAATAACTTTTTGTTTGTTTTAT
CTTTCTTAGAACAATGCCACGACGAAAAAGAGCGTTACTTTTCATGCAAG
GGTGACTTAGAAAGAATATTGGAAGAAGTTCAAGGAATCTAAAAAAAACA
AAGTGATTTTTTTTGGTTTGTAGCACGTTAGCACAGATTTGTACATTGAG
AATTATTACTGTATTTTGTATAATAGATATCCGAAACATATTTCATTTCA
CAAATCAATCTAATCTTAATCATTCCCTTGTTACCAAGGATGATTGCGAA
CTCCTATCAAGATGTCATCTTCTTCACTACATAATGTTTCGATCGAATCA
GGCGACATACTATTGTCCGCTTTTTATTTAGAGATATCCGCTATTTCGAA
TACTCAATAGATATCAGGGGGATGAGCCGTCGTGTGTCATATGTTTCATG
GTTCAAAAAAATAGTCTGTGGCCGGAAAAAAAAGGCCGTTGAAAAAAGAA
GTCAGAGAGAGAGGTCGTCATTTGAAATAAAGCTCTTCTCGTTTTGATCA
TGATTTTCGGAGGTCTTTTAAATTAACCTTTGTTTGCCCGTTCGTTCTTT
TGTCTGTTACCATCTTTTCTCGGAATTGGTCCATAATTATTTGCACATTG
CACATCCAAAAAGTGACTGGGCCCGATTTTCGAAAAAATTAAATTTTGGG
CAAATTCGGGCCTAAAAATAGGGTTTTTTGGACTTTGTTTTAAATTCCTT
CATTAGTTTTTTCTATTTTTTTGGCAAAGTTCTTTGAAAAGTGGCTAAAG
TCGTTGTGTATTTTTTCTCCTTAGACGGACGGAAATATCATTTTTATGGT
CAGAAATATCATAAGATGTTCGGAAATATCTTTTGATGGTCGGCCACATC
TAAATCTTTTTTTAAAATCTTGGGAAAATTGATAGTTGGAAATATCCTAA
GATTCTTTAAATATGCTTTGTCAGCATATTTTATAACATTGTAGAGAAGA
AGAGGAACAGAATTTCGTAAAGCCTAGACTAGATTCCACTCCTGTCTAAA
CTTTGATTTTTGATAATTTTTGATGACGCTGAGTTCAGTGGAGTATACAG
CATAGTTACTTATCAGCGTTATCCAGTGCAGTATATCAAAAAGCTCTAAG
TTGCCTCCAGGCTACGTAAAGCCCTGAGTGTCAAGGGATGGATAAGAGAT
CTACTTACTCCAAACAAATACCCCATGAGCATGAAGCTAGTTGAATTTCA
AGTCAAAGGAAATTTGGGCCGCTCTGCAAAAATCTGTGACGAAGGAAAGT
ATAATACTAAAGAAGTTTTGCAAAGAAATGACTTTTTATCTTTGTTTAAA
ATCTTTCCTTCAAGAAAGAGGAAAGCAAGGACTGCCTAAAACCCTTACTT
AACCAACCATAATAAATCTTTGTCTATTGAAAGGACGTTAAAACTTTGAG
AGCAGCCACTCAGACTTGTTTAGAAGTAAACTAACTTTTTTAGATGAACA
ATTAAGTCCATAAGATCACAAAAACGAGTGGTGAGAAAATCTTGNATCTA
TTATAATTCCTTCGAGAGTCCCTAGAAACCAGAATGCATTGCATTTATCG
AAAGCCGATATCGTCTATTTGAGAAGCATGGAACGATATGAAATGAAATC
CAACGAACGAGGAACAGAAATTCAAGAGAAAATTGAAGAACTTGAAGCAA
AATGCGCGGAGGTAAATATAAGAAAAGTTAAAAAAATCCTTCCACCTATG
CTAACCGGTCTCTCTAACTGAAATAAATGACTGTTCCCCATGATGTTTTA
CTTACTTGATTATTTCTATTTCGTCAGGCGAAAGAGAAAGCAGAGCAATA
CGAAGCAAAGTCCAAAGAAATGGAAGATGAACTCGAATCTTTAGAACGTA
AGTTTTTTGATTTTTATAGACATTGGACTATAACAACTACAGTAAGACAC
TTGTACCAATTTTTTATGGCAAGAATCTATTTGAGGAAAATTATAGATAT
CAACTCCTCCTTGGGCAACAAATCAAACTTGGCTTTAGAACACAATCCTT
TTCCGAGGACGACTTTGCCCAAATACACCAGTGAAACATTTTCACTTACT
GAGGATTAAAACTTCAGCGTATGAAAGTATTTTCCTGACGGGGATGACTT
AACTTTATCACCAAATTTTCTTTTGTTGAGAAGTGTCGAGCATGTGGCAT
ACTAGTGGGTATTAGACAATTTCAAATATTTTGTTTAGCTATTGCTGAAA
ACAACACAACCTTTAGTCTTTCCAGACCATTTTCTTCAAATCATTGACAT
TGACGAGTATTATTGAATAACTTTTTGTTTGTTTTATCTTTCTTAGAACA
ATGCCACGACGAAAAAGAGCGTTACTTTTCATGCAAGGGTGACTTAGAAA
GAATATTGGAAGAAGTTCAAGGAATCTAAAAAAAACAAAGTGATTTTTTT
TGGTTTGTAGCACGTTAGCACAGATTTGTACATTGAGAATTATTACTGTA
TTTTGTATAATAGATATCCGAAACATATTTCATTTCACAAAT

Coding sequence (CDS) from alignment at scaffold_48:146876..156817-

>TCONS_00068158 ID=TCONS_00068158|Name=TCONS_00068158|organism=Clytia hemisphaerica|type=CDS|length=5565bp|location=Sequence derived from alignment at scaffold_48:146876..156817- (Clytia hemisphaerica)
AACAATGCCACGACGAAAAAGAGCGTTACTTTTCATGCAAGGGTGACTTA
GAAAGAATATTGGAAGAAGTTCAAGGAATCTAAGCGAAAGAGAAAGCAGA
GCAATACGAAGCAAAGTCCAAAGAAATGGAAGATGAACTCGAATCTTTAG
AACTCGCGTCAAAACATTGGAAGAAAAATTCATTCAACTTGGCAATAATT
TGAGAAGCATGGAACGATATGAAATGAAATCCAACGAACGAGGAACAGAA
ATTCAAGAGAAAATTGAAGAACTTGAAGCAAAATGCGCAGAGATCAGTCA
AGAGTTATCCGAAATAGAAGCCACTTATGATGAAGAAGAAGAACGATGCC
AGGAAGCTGATGTACGGAAGAGCAAGTGAAATTGGTTCAGGATAAACTGT
CAAGCATCGAAGAAGAGCTAGACGATACAGAACGACGTCATGAGACGGTC
TCACAGAAGTTGGTGGAACTAGAAGTACGAGGTGACGAAGTGCAAAGACA
GTACGGTGAACTGACCGCCAGAAGCGAAACGGACCAAATAAAGATCGATG
CGCTGGAAGAACAATTAAGTGAAGTCAAAAGTAAAGATGAAGAACTCAGT
GCAAATTATGAAACGATATTTTACCACTGCAGAGCAATGGAGGTCATTCG
AAAGAAATTGGGAGGATTGAAATCGAAATTAGACGAAGCAGAAAGGCAAG
CAAATGCCACCGAAGATGAACTCAACTCTATTAACGAAAAAGCTGATGAT
ATCATTTCTCTTTTGATGAAAATTCTTTCTGCCGGGTACGAAATGAACAA
TGCCACGACGAAAAAGAGCGTTACTTTTCATGCAAGGGTGACTTAGAAAG
AATATTGGAAGAAGTTCAAGGAATCTAAGCGAAAGAGAAAGCAGAGCAAT
ACGAAGCAAAGTCCAAAGAAATGGAAGATGAACTCGAATCTTTAGAACTC
GCGTCAAAACATTGGAAGAAAAATTCATTCAACTTGGCAATAATTTGAGA
AGCATGGAACGATATGAAATGAAATCCAACGAACGAGGAACAGAAATTCA
AGAGAAAATTGAAGAACTTGAAGCAAAATGCGCAGAGATCAGTCAAGAGT
TATCCGAAATAGAAGCCACTTATGATGAAGAAGAAGAACGATGCCAGGAA
GCTGATGTACGGAAGAGCAAGTGAAATTGGTTCAGGATAAACTGTCAAGC
ATCGAAGAAGAGCTAGACGATACAGAACGACGTCATGAGACGGTCTCACA
GAAGTTGGTGGAACTAGAAGTACGAGGTGACGAAGTGCAAAGACAGTACG
GTGAACTGACCGCCAGAAGCGAAACGGACCAAATAAAGATCGATGCGCTG
GAAGAACAATTAAGTGAAGTCAAAAGTAAAGATGAAGAACTCAGTGCAAA
TTATGAAACGATATTTTACCACTGCAGAGCAATGGAGGTCATTCGAAAGA
AATTGGGAGGATTGAAATCGAAATTAGACGAAGCAGAAAGGCAAGCAAAT
GCCACCGAAGATGAACTCAACTCTATTAACGAAAAAGCTGATGATATCAT
TTCTCTTTTGATGAAAATTCTTTCTGCCGGGTACGAAATGAACAATGCCA
CGACGAAAAAGAGCGTTACTTTTCATGCAAGGGTGACTTAGAAAGAATAT
TGGAAGAAGTTCAAGGAATCTAAGCGAAAGAGAAAGCAGAGCAATACGAA
GCAAAGTCCAAAGAAATGGAAGATGAACTCGAATCTTTAGAACTCGCGTC
AAAACATTGGAAGAAAAATTCATTCAACTTGGCAATAATTTGAGAAGCAT
GGAACGATATGAAATGAAATCCAACGAACGAGGAACAGAAATTCAAGAGA
AAATTGAAGAACTTGAAGCAAAATGCGCAGAGATCAGTCAAGAGTTATCC
GAAATAGAAGCCACTTATGATGAAGAAGAAGAACGATGCCAGGAAGCTGA
TGTACGGAAGAGCAAGTGAAATTGGTTCAGGATAAACTGTCAAGCATCGA
AGAAGAGCTAGACGATACAGAACGACGTCATGAGACGGTCTCACAGAAGT
TGGTGGAACTAGAAGTACGAGGTGACGAAGTGCAAAGACAGTACGGTGAA
CTGACCGCCAGAAGCGAAACGGACCAAATAAAGATCGATGCGCTGGAAGA
ACAATTAAGTGAAGTCAAAAGTAAAGATGAAGAACTCAGTGCAAATTATG
AAACGATATTTTACCACTGCAGAGCAATGGAGGTCATTCGAAAGAAATTG
GGAGGATTGAAATCGAAATTAGACGAAGCAGAAAGGCAAGCAAATGCCAC
CGAAGATGAACTCAACTCTATTAACGAAAAAGCTGATGATATCATTTCTC
TTTTGATGAAAATTCTTTCTGCCGGGTACGAAATGAACAATGCCACGACG
AAAAAGAGCGTTACTTTTCATGCAAGGGTGACTTAGAAAGAATATTGGAA
GAAGTTCAAGGAATCTAAGCGAAAGAGAAAGCAGAGCAATACGAAGCAAA
GTCCAAAGAAATGGAAGATGAACTCGAATCTTTAGAACTCGCGTCAAAAC
ATTGGAAGAAAAATTCATTCAACTTGGCAATAATTTGAGAAGCATGGAAC
GATATGAAATGAAATCCAACGAACGAGGAACAGAAATTCAAGAGAAAATT
GAAGAACTTGAAGCAAAATGCGCAGAGATCAGTCAAGAGTTATCCGAAAT
AGAAGCCACTTATGATGAAGAAGAAGAACGATGCCAGGAAGCTGATGTAC
GGAAGAGCAAGTGAAATTGGTTCAGGATAAACTGTCAAGCATCGAAGAAG
AGCTAGACGATACAGAACGACGTCATGAGACGGTCTCACAGAAGTTGGTG
GAACTAGAAGTACGAGGTGACGAAGTGCAAAGACAGTACGGTGAACTGAC
CGCCAGAAGCGAAACGGACCAAATAAAGATCGATGCGCTGGAAGAACAAT
TAAGTGAAGTCAAAAGTAAAGATGAAGAACTCAGTGCAAATTATGAAACG
ATATTTTACCACTGCAGAGCAATGGAGGTCATTCGAAAGAAATTGGGAGG
ATTGAAATCGAAATTAGACGAAGCAGAAAGGCAAGCAAATGCCACCGAAG
ATGAACTCAACTCTATTAACGAAAAAGCTGATGATATCATTTCTCTTTTG
ATGAAAATTCTTTCTGCCGGGTACGAAATGAACAATGCCACGACGAAAAA
GAGCGTTACTTTTCATGCAAGGGTGACTTAGAAAGAATATTGGAAGAAGT
TCAAGGAATCTAAGCGAAAGAGAAAGCAGAGCAATACGAAGCAAAGTCCA
AAGAAATGGAAGATGAACTCGAATCTTTAGAACTCGCGTCAAAACATTGG
AAGAAAAATTCATTCAACTTGGCAATAATTTGAGAAGCATGGAACGATAT
GAAATGAAATCCAACGAACGAGGAACAGAAATTCAAGAGAAAATTGAAGA
ACTTGAAGCAAAATGCGCAGAGATCAGTCAAGAGTTATCCGAAATAGAAG
CCACTTATGATGAAGAAGAAGAACGATGCCAGGAAGCTGATGTACGGAAG
AGCAAGTGAAATTGGTTCAGGATAAACTGTCAAGCATCGAAGAAGAGCTA
GACGATACAGAACGACGTCATGAGACGGTCTCACAGAAGTTGGTGGAACT
AGAAGTACGAGGTGACGAAGTGCAAAGACAGTACGGTGAACTGACCGCCA
GAAGCGAAACGGACCAAATAAAGATCGATGCGCTGGAAGAACAATTAAGT
GAAGTCAAAAGTAAAGATGAAGAACTCAGTGCAAATTATGAAACGATATT
TTACCACTGCAGAGCAATGGAGGTCATTCGAAAGAAATTGGGAGGATTGA
AATCGAAATTAGACGAAGCAGAAAGGCAAGCAAATGCCACCGAAGATGAA
CTCAACTCTATTAACGAAAAAGCTGATGATATCATTTCTCTTTTGATGAA
AATTCTTTCTGCCGGGTACGAAATGAACAATGCCACGACGAAAAAGAGCG
TTACTTTTCATGCAAGGGTGACTTAGAAAGAATATTGGAAGAAGTTCAAG
GAATCTAAGCGAAAGAGAAAGCAGAGCAATACGAAGCAAAGTCCAAAGAA
ATGGAAGATGAACTCGAATCTTTAGAACTCGCGTCAAAACATTGGAAGAA
AAATTCATTCAACTTGGCAATAATTTGAGAAGCATGGAACGATATGAAAT
GAAATCCAACGAACGAGGAACAGAAATTCAAGAGAAAATTGAAGAACTTG
AAGCAAAATGCGCAGAGATCAGTCAAGAGTTATCCGAAATAGAAGCCACT
TATGATGAAGAAGAAGAACGATGCCAGGAAGCTGATGTACGGAAGAGCAA
GTGAAATTGGTTCAGGATAAACTGTCAAGCATCGAAGAAGAGCTAGACGA
TACAGAACGACGTCATGAGACGGTCTCACAGAAGTTGGTGGAACTAGAAG
TACGAGGTGACGAAGTGCAAAGACAGTACGGTGAACTGACCGCCAGAAGC
GAAACGGACCAAATAAAGATCGATGCGCTGGAAGAACAATTAAGTGAAGT
CAAAAGTAAAGATGAAGAACTCAGTGCAAATTATGAAACGATATTTTACC
ACTGCAGAGCAATGGAGGTCATTCGAAAGAAATTGGGAGGATTGAAATCG
AAATTAGACGAAGCAGAAAGGCAAGCAAATGCCACCGAAGATGAACTCAA
CTCTATTAACGAAAAAGCTGATGATATCATTTCTCTTTTGATGAAAATTC
TTTCTGCCGGGTACGAAATGAACAATGCCACGACGAAAAAGAGCGTTACT
TTTCATGCAAGGGTGACTTAGAAAGAATATTGGAAGAAGTTCAAGGAATC
TAAGCGAAAGAGAAAGCAGAGCAATACGAAGCAAAGTCCAAAGAAATGGA
AGATGAACTCGAATCTTTAGAACTCGCGTCAAAACATTGGAAGAAAAATT
CATTCAACTTGGCAATAATTTGAGAAGCATGGAACGATATGAAATGAAAT
CCAACGAACGAGGAACAGAAATTCAAGAGAAAATTGAAGAACTTGAAGCA
AAATGCGCAGAGATCAGTCAAGAGTTATCCGAAATAGAAGCCACTTATGA
TGAAGAAGAAGAACGATGCCAGGAAGCTGATGTACGGAAGAGCAAGTGAA
ATTGGTTCAGGATAAACTGTCAAGCATCGAAGAAGAGCTAGACGATACAG
AACGACGTCATGAGACGGTCTCACAGAAGTTGGTGGAACTAGAAGTACGA
GGTGACGAAGTGCAAAGACAGTACGGTGAACTGACCGCCAGAAGCGAAAC
GGACCAAATAAAGATCGATGCGCTGGAAGAACAATTAAGTGAAGTCAAAA
GTAAAGATGAAGAACTCAGTGCAAATTATGAAACGATATTTTACCACTGC
AGAGCAATGGAGGTCATTCGAAAGAAATTGGGAGGATTGAAATCGAAATT
AGACGAAGCAGAAAGGCAAGCAAATGCCACCGAAGATGAACTCAACTCTA
TTAACGAAAAAGCTGATGATATCATTTCTCTTTTGATGAAAATTCTTTCT
GCCGGGTACGAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042542XLOC_042542Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068158-proteinTCONS_00068158-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068158-exon-scaffold_48-1575043694:156771..156817TCONS_00068158-exon-scaffold_48-1575043694:156771..156817Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1575043694:155482..155616TCONS_00068158-exon-scaffold_48-1575043694:155482..155616Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1575043694:154816..155067TCONS_00068158-exon-scaffold_48-1575043694:154816..155067Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1575043694:152400..152470TCONS_00068158-exon-scaffold_48-1575043694:152400..152470Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1575043694:152064..152202TCONS_00068158-exon-scaffold_48-1575043694:152064..152202Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1575043694:149808..149877TCONS_00068158-exon-scaffold_48-1575043694:149808..149877Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1575043694:146876..147071TCONS_00068158-exon-scaffold_48-1575043694:146876..147071Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1510915933:156771..156817TCONS_00068158-exon-scaffold_48-1510915933:156771..156817Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1510915933:155482..155616TCONS_00068158-exon-scaffold_48-1510915933:155482..155616Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1510915933:154816..155067TCONS_00068158-exon-scaffold_48-1510915933:154816..155067Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1510915933:152400..152470TCONS_00068158-exon-scaffold_48-1510915933:152400..152470Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1510915933:152064..152202TCONS_00068158-exon-scaffold_48-1510915933:152064..152202Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1510915933:149808..149877TCONS_00068158-exon-scaffold_48-1510915933:149808..149877Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1510915933:146876..147071TCONS_00068158-exon-scaffold_48-1510915933:146876..147071Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1491911889:156771..156817TCONS_00068158-exon-scaffold_48-1491911889:156771..156817Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1491911889:155482..155616TCONS_00068158-exon-scaffold_48-1491911889:155482..155616Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1491911889:154816..155067TCONS_00068158-exon-scaffold_48-1491911889:154816..155067Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1491911889:152400..152470TCONS_00068158-exon-scaffold_48-1491911889:152400..152470Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1491911889:152064..152202TCONS_00068158-exon-scaffold_48-1491911889:152064..152202Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1491911889:149808..149877TCONS_00068158-exon-scaffold_48-1491911889:149808..149877Clytia hemisphaericaexon
TCONS_00068158-exon-scaffold_48-1491911889:146876..147071TCONS_00068158-exon-scaffold_48-1491911889:146876..147071Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:146876..156817 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0253051	0.0123382	0	0	0.0444629	0.135046	0	0	0.0419294	0.0207925	0.0128187	0.0589857	0.0116417	0	0.0752568	0.039316	0.966245	0.804899	0.0912031	0.113747	3.15159	2.47449	18.9577	21.3308	14.9682	11.6631	0.0910467	0.0555465	0	0.0286159
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000533Tropomyosin
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068158 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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