TCONS_00068351 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00068351
Unique Name	TCONS_00068351
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1520

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_483:462747..468516+
coding sequence from alignment at scaffold_483:462747..468516+

transcript sequence

>TCONS_00068351 ID=TCONS_00068351|Name=TCONS_00068351|organism=Clytia hemisphaerica|type=transcript|length=1520bp
ATTAAGTTTAAAAGGATAATTTGAATTGAATAGTAACTGAAAGCTGATTG
GAGGATGACACTTTCTCCACCTTGGGCCGAGTTTctaattatatttttat
ttgggGAAAGACTTGTATGTCTATTATATATAGCAAGACATTGACAATGA
TGCATTTTGGTCTTTGCTTTTCAGAGACTTTCGGAGTGTCTGGTCAATTT
ACAATCAAAAAGCCATTTGTCAATGATGCGCCGTTATCACAAAAAGACCT
TGATGATAAAACGTCTGACACTTACAAGTTCATGgttcaaactttgaaaa
acaagATCATGACGTccttgaaaaacgaagaaaagaagATTTCAAGAATC
GAGATTACAAAACTGACTATTGGAAGCCTTGTGGTGGATTACGAAATTTA
CGGTACCGATACATTGAATAATGAAACTTTGAATGAAGGAATTAAGAAAT
CATTTTCTGACGATTCGAATCTTCAAACATCAACTGATACTCACTCTTTC
TCTGGTACTATCGATCCTCAAAGCCAACAGTTAAACGCCATTGATAATTG
CGCGTCTGAGCCTTGTCATACAAATGCTACATGTACAAACAACGTTGAAA
AGAATACTTTCTCTTGTGAGTGTGACCAAGGATTTGAAGGTGATGGTTTC
ACGTGCTCAAGAATCATTGAACGAGTTGTACACAACGTTAAATTGAAAGA
TGACTGGTCAGACGATTCGATCATCATCGTAGCAGTGTTGTTCTCCGTTT
GTTTTGTTGTGATTGTTATCTTGGCTTTCTGTCTTTGTTGTTCCAAacGA
AGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCGAATTACTATTCAAC
TGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGAACTCATGAACAATG
TTTACATCAATGATGATGTCAATGGGAATAATTCTACGGTAACCGATCCT
AACAAtccaaaatatcaaaacattcgCCAAAACATGGTATAATGTGGGAA
GATTTAAGATTTCACTGATTAGATTGAACAACGCTAGtccaatagatctt
atcggagttttttatttttctaaaaaaacgatgcattgtgggattgtttc
gggagtaacagaattccctcgaggaattcctaataTATTTCTATTggaat
actcccgaaacaaccCCACAATGCAttcctttttagaaaaatcaaaaact
ccgataaggtctattgcgaTTTTACTACGTTTTATAtgaatgtgataaaa
aaaataaaataaataaatatgaaaaattataaCCTACAAGTGGACTAGCA
GACTTATACCGATAACAGGATCCATCGAGGCGCCCCATGAATAATTGTAG
aataaatttgtaaatattatgaataaatttgatatctttttgttgaaata
ttttaaaatggatttttattttgaatttttttatttattattttcgaaaa
aagtttttttttagatattattttttttatactaAAGAATTTAGCCTGTA
AATATAAAAGACGAAAGTGA

Run BLAST on NCBI

protein sequence of TCONS_00068351-protein

>TCONS_00068351-protein ID=TCONS_00068351-protein|Name=TCONS_00068351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MSIIYSKTLTMMHFGLCFSETFGVSGQFTIKKPFVNDAPLSQKDLDDKTS
DTYKFMVQTLKNKIMTSLKNEEKKISRIEITKLTIGSLVVDYEIYGTDTL
NNETLNEGIKKSFSDDSNLQTSTDTHSFSGTIDPQSQQLNAIDNCASEPC
HTNATCTNNVEKNTFSCECDQGFEGDGFTCSRIIERVVHNVKLKDDWSDD
SIIIVAVLFSVCFVVIVILAFCLCCSKRSQSKSQKKNEFSNYYSTDVPTK
EKVPETELMNNVYINDDVNGNNSTVTDPNNPKYQNIRQNMV

Run BLAST on NCBI

transcript from alignment at scaffold_483:462747..468516+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00068351 ID=TCONS_00068351|Name=TCONS_00068351|organism=Clytia hemisphaerica|type=transcript|length=5770bp|location=Sequence derived from alignment at scaffold_483:462747..468516+ (Clytia hemisphaerica)
ATTAAGTTTAAAAGGATAATTTGAATTGAATAGTAACTGAAAGCTGATTG
GAGGATGACACTTTCTCCACCTTGGGCCGAGTTTctaattatatttttat
ttgggGAAAGACTTGTATGTCTATTATATATAGCAAGACATTGACAATGA
TGCATTTTGGTCTTTGCTTTTCAGAGACTTTCGGAGTGTCTGGTCAATTT
ACAATCAAAAAGCCATTTGTCAATGATGCGCCGTTATCACAAAAAGACCT
TGATGATAAAACGTCTGACACTTACAAGTTCATGgttcaaactttgaaaa
acaagGTATGTATAAAATACATACTTCAAAAATGCACAGGAGTTTCAGGA
ATGTCTGATTTGATAAAGCCACCCACCTCCACCGCCAAATACTTATCATT
TTCTGTTCAATAAAAACCGATTGATAGTCTGATACAGGCTATATTCGATA
AGTTGATTTCCAACGTCCTACTAGTATCAGGTTACAAAACACTCTTCGAT
TCGTCATTTTTCTAGGGTAATAATACAATAATTAGCGACACGTTAAATTT
TTGAGCCATGCCTTAAATAagatttggagattttaaagaaaatactgTTA
TGTGTTCTTCTATTGGATGTTCTGACATTCTTTTGTAGCAAAGATATTCG
GAACTGCGTTTCCTTTGCAGTAAGACTTGAACAACCTAAATAGTCTAAGC
CTCAGCCATTACTTacttgttctcataaaaaaacgctCATGATAGTTTGT
TATTGAATAATTTATTGATTGATATGTTTCTCTTAGATCATGACGTcctt
gaaaaacgaagaaaagaagATTTCAAGAATCGAGATTACAAAACTGACGT
AAGTCGAGTTAATTTCCACCTTACAGTCCCCTGCTAGGGTCTGCGACCTG
TCGGACTAAGTGGAGCCCCTTCCAATTCGCAACGATTTACTAAAAATAAT
CTCTAGAAGCATCACTACTACCCTACTTGCTTTTGTGAGCTGGAAACggg
aaattgataaattttcgaCTTATGGAAAATTTGATGTGTATAGACTTGat
ggaaatatctttcaaatttctttcttcCTACAGTATTGGAAGCCTTGTGG
TGGATTACGAAATTTACGGTACCGATACATTGAATAATGAAACTTTGAAT
GAAGGAATTAAGAAATCATTTTCTGACGATTCGAATCTTCAAACATCAAC
TGATACTCACTCTTTCTCTGGTACTATCGATCCTCAAAGCCAACAGTTAA
ACGGTAAGGTtagatagatatgccctccgatgcatcggaatgggtcctac
cNGATTAACGTCAgttgaaattgaaagaaaattcagactgcaaaataaat
aattgattttggtctgtaaaataccaacaaCTAGCTGAGTTAAACCGTTA
TCATTATTATCTATCTTTggtaaaaatttcaagttcatagcACTTTCCAA
TCATAAGAGCAGGGTGATTAATCCGTAATATAATAAGGTTTTTTCAtcga
aaacaagtgatacttttatggacatACCTGattatcaaaactaatcaatg
aacatttaaacaatgaaaaacTTAAGAcataaaatggtcaaaatccaaaa
taataatatttgTTTGGGTAAGAAGTGCTTACAAAGACACATATATAATT
AATGCCTacgttttataaaaaacatgtttaaaaaaatttcatgatcaAAC
ATAAGTATTCTTTCAAATTCAAGACGTTGTGagtaaaaaaacatctatct
catcaaaaaattgagtaatttggctacaAACATTCATATTTGCTCATTAA
taatgattcttatagataaagttttttgcgttttttgagccgttaattat
ttttttgcaaaatcaattTGAATCATCTTTTatctatgatggtaccctac
tagatagatatgccctccgatgcatcggaatgggtcctacccacggtgga
gtaggaatcacagcgcaatcagacattgcaaccctgcagatgcgagctgc
cgagccatggtgtataccacgacactcgaactacacgggagaacggatgt
cctcgcaggtgtagaacctcctgAGTGTCAcggcacaccacaatgtctga
aacatctacccatactcttgtatcagagttatggtacccaattcccctca
catggcatgggttgacccgggcgaaggagcattcacttgccaagtgaatc
gtagtgccacggtgggtatcgaactcgagcctcctggacagaagtcaagc
acgataaccactacaccactacgtacggtaccctactttcatccaaaaat
tagaaaaaaattatgatccAATATTAATCACAAAAACCAAAAACTCTTTT
CTAGCCAAAAATCggttccgtcacattcgagggtttatagttatgcatct
ttgtgcaagaaatcataaaaaatgaatgagtcaatctcgagaaaagctaa
taactaaataattgataatgtgcttataaaaaatattgtatttgggaaat
ttttctataaaaaacacGTCTAGCAAGCAAAGTTTCATGTCCAAAcacaa
atattctttaaaagtaagcctcgatgagcaaaaaaaacatctatcacaaa
aattgagtaatttggctaagaacagtgatgtatgcttattaataatgatt
cttatagataaaaatgcgttttttaagccaacaaattttttttgNTcgat
gagcaaaaaaaaacatctatcacaaaaattgagttatttgactaagaaca
gtgatgtatgcttattaataatgattcttatagatagcgttttttaagcc
aacaaatttttttttgaaaagatctgctttagccatcttttacctatgat
agtaccctacattcatgcaaaaaattagaaaaaatgaataatcCAACTTT
TCACAAAGTGCGAAAATTCcaatttttagccttttttagGCCCACATTTG
CCCCAAAATTTACTTATTCGAAAATCAGCTCCGCCattttcgagggttta
tagttatgcagtattgtgcaaaaaatcataagaaATAAAAGAACCAATCA
CGACAAAAGTTAAAAACTAAGTAATTGgtgatgtgcttataaaaaaatat
cgaatttggcccatttttatctaaaaacaaccaaaattctATGACAAAAC
ACAATTTTTCTTCAATAGTGAGCCTTCATAACAACAAAAAAATCtacctc
ataaaaaaattgagtattttggctaagaacatcgatgtatgctatagtga
ttcttatagataaacatgcgtttttgagccaacaaaattttttttggaat
tatctgcttgagccatcttttacctatgattgTACCCGAccttcatgcaa
aaaattaaaaacaattaatgatccaatttttcacaaagtccaaaaaaccc
aatTTTTAGCCCAATTTGCGAAATCCGTGTgcaaaaatttatatcaaatc
cagtgaaattttttaaaacctGGTCTCCATTAAATGGAGGTTCCTACACC
ACAGTTCACGGTTTCAGGGTCTTACCCTGAAAGAAATGCAAATTAAAAAG
CGCGGGAAACTGtttttttaacaagcgaaaaataggatttttaacaagcg
aaaaataggatttttaacaagcgaaaaatacgattttttaacaagcgaaa
agtgaaatttttaacaagcgaaaaataggatttttaacaagcgaaaaatg
agattttttaacaagcgaaaaatacgatttttaacaagcgaaaaatatga
cttttaacaagcgaaaaatacaatttttaacaagcgaaaaatatgacttt
taacaagcgaaaaatatgacttttaacaagcgaaaaatatgacttttaac
aagcgaaaatgGCCATTCTGTTTTAATCGcaataaataattttgaaacaa
acGGCACGTCAtaaatttcNcacagggtccatttttcgagaAATCACCCA
GTACAATCTCTACAGACGATAAGGGTGGTTGTACCGCCTCCAAGCACCAC
CATAACCCAACCACAGGGGttttcaattttccatttttcatttttgttct
tTAGATTTTACTAAAAGACTGCATCTCTACAAccaaattttgttaatatt
ttcagCCATTGATAATTGCGCGTCTGAGCCTTGTCATACAAATGCTACAT
GTACAAACAACGTTGAAAAGAATACTTTCTCTTGTGAGTGTGACCAAGGA
TTTGAAGGTGATGGTTTCACGTGCTCAAGAATCATTGAACGAGTTGTACA
CAACGTTAAATTGAAAGATGACTGTAAGTATGATTAGTGAAATTCTACTC
TCCTCTTGAAACCAGTGTACAAagtttttccgtctcagacggattttcgt
ctcaGTGAGGTGCAAAAAGAGACTTTTCCGtctccaaattcaacaaaatt
ctgcaaaacatGAAGATACGGAATTAGTGCCATTCAGATTCTcctttaat
tttttaacgacgaaactaaaaaattgacaacgaaaataaaaaattgacta
tgATGTGAAGTCCGAAGACATTGCAATAGTGGTGCATTTCATGAATAACA
TTaattgaacgttaaaacaacgttgaaacaacgttgtttgccaGCTAAGT
GAGTACACTGAGTTACGGATCAACTTTGAAATAATTATTACCTTCAAACC
TTTCATATTTTCAGGGTCAGACGATTCGATCATCATCGTAGCAGTGTTGT
TCTCCGTTTGTTTTGTTGTGATTGTTATCTTGGCTTTCTGTCTTTGTTGT
TCCAAGTAAGTGCATTATGCCAactttctttgtgtttttcGATAGTAAAT
TGCTTTTGTGTCGCccaaaggttgaagattcattGCTAAATTACTTAACG
AATGTCTAAATTTCTGAAAGTTTTCGAATTTTGGAGTAcctaattttcaa
ttttttgaaagtttttttcaaagtaTTGATTGCTTATTATACctctgtca
aaaaatttttctcgaaaTCCTTTTAAAATTGTTCGATTATTTTCTCTTTG
TAAGATAAACGccttttttacaaaacttttttattttattttctagacGA
AGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCGAATTACTATTCAAC
TGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGAACTCATGAACAATG
TTTACATCAATGATGATGTCAATGGGAATAATTCTACGGTAACCGATCCT
AACAAtccaaaatatcaaaacattcgCCAAAACATGGTATAATGTGGGAA
GATTTAAGATTTCACTGATTAGATTGAACAACGCTAGtccaatagatctt
atcggagttttttatttttctaaaaaaacgatgcattgtgggattgtttc
gggagtaacagaattccctcgaggaattcctaataTATTTCTATTggaat
actcccgaaacaaccCCACAATGCAttcctttttagaaaaatcaaaaact
ccgataaggtctattgcgaTTTTACTACGTTTTATAtgaatgtgataaaa
aaaataaaataaataaatatgaaaaattataaCCTACAAGTGGACTAGCA
GACTTATACCGATAACAGGATCCATCGAGGCGCCCCATGAATAATTGTAG
aataaatttgtaaatattatgaataaatttgatatctttttgttgaaata
ttttaaaatggatttttattttgaatttttttatttattattttcgaaaa
aagtttttttttagatattattttttttatactaAAGAATTTAGCCTGTA
AATATAAAAGACGAAAGTGA

Coding sequence (CDS) from alignment at scaffold_483:462747..468516+

>TCONS_00068351 ID=TCONS_00068351|Name=TCONS_00068351|organism=Clytia hemisphaerica|type=CDS|length=5256bp|location=Sequence derived from alignment at scaffold_483:462747..468516+ (Clytia hemisphaerica)
ATGTCTATTATATATAGCAAGACATTGACAATGATGCATTTTGGTCTTTG
CTTTTCAGAGACTTTCGGAGTGTCTGGTCAATTTACAATCAAAAAGCCAT
TTGTCAATGATGCGCCGTTATCACAAAAAGACCTTGATGATAAAACGTCT
GACACTTACAAGTTCATGgttcaaactttgaaaaacaagATCATGACGTc
cttgaaaaacgaagaaaagaagATTTCAAGAATCGAGATTACAAAACTGA
CTATTGGAAGCCTTGTGGTGGATTACGAAATTTACGGTACCGATACATTG
AATAATGAAACTTTGAATGAAGGAATTAAGAAATCATTTTCTGACGATTC
GAATCTTCAAACATCAACTGATACTCACTCTTTCTCTGGTACTATCGATC
CTCAAAGCCAACAGTTAAACGCCATTGATAATTGCGCGTCTGAGCCTTGT
CATACAAATGCTACATGTACAAACAACGTTGAAAAGAATACTTTCTCTTG
TGAGTGTGACCAAGGATTTGAAGGTGATGGTTTCACGTGCTCAAGAATCA
TTGAACGAGTTGTACACAACGTTAAATTGAAAGATGACTGGTCAGACGAT
TCGATCATCATCGTAGCAGTGTTGTTCTCCGTTTGTTTTGTTGTGATTGT
TATCTTGGCTTTCTGTCTTTGTTGTTCCAAacGAAGTCAAAGCAAATCAC
AAAAGAAGAACGAATTTTCGAATTACTATTCAACTGACGTTCCCACAAAA
GAAAAAGTGCCGGAAACCGAACTCATGAACAATGTTTACATCAATGATGA
TGTCAATGGGAATAATTCTACGGTAACCGATCCTAACAAtccaaaatatc
aaaacattcgCCAAAACATGGTATAAATGTCTATTATATATAGCAAGACA
TTGACAATGATGCATTTTGGTCTTTGCTTTTCAGAGACTTTCGGAGTGTC
TGGTCAATTTACAATCAAAAAGCCATTTGTCAATGATGCGCCGTTATCAC
AAAAAGACCTTGATGATAAAACGTCTGACACTTACAAGTTCATGgttcaa
actttgaaaaacaagATCATGACGTccttgaaaaacgaagaaaagaagAT
TTCAAGAATCGAGATTACAAAACTGACTATTGGAAGCCTTGTGGTGGATT
ACGAAATTTACGGTACCGATACATTGAATAATGAAACTTTGAATGAAGGA
ATTAAGAAATCATTTTCTGACGATTCGAATCTTCAAACATCAACTGATAC
TCACTCTTTCTCTGGTACTATCGATCCTCAAAGCCAACAGTTAAACGCCA
TTGATAATTGCGCGTCTGAGCCTTGTCATACAAATGCTACATGTACAAAC
AACGTTGAAAAGAATACTTTCTCTTGTGAGTGTGACCAAGGATTTGAAGG
TGATGGTTTCACGTGCTCAAGAATCATTGAACGAGTTGTACACAACGTTA
AATTGAAAGATGACTGGTCAGACGATTCGATCATCATCGTAGCAGTGTTG
TTCTCCGTTTGTTTTGTTGTGATTGTTATCTTGGCTTTCTGTCTTTGTTG
TTCCAAacGAAGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCGAATT
ACTATTCAACTGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGAACTC
ATGAACAATGTTTACATCAATGATGATGTCAATGGGAATAATTCTACGGT
AACCGATCCTAACAAtccaaaatatcaaaacattcgCCAAAACATGGTAT
AAATGTCTATTATATATAGCAAGACATTGACAATGATGCATTTTGGTCTT
TGCTTTTCAGAGACTTTCGGAGTGTCTGGTCAATTTACAATCAAAAAGCC
ATTTGTCAATGATGCGCCGTTATCACAAAAAGACCTTGATGATAAAACGT
CTGACACTTACAAGTTCATGgttcaaactttgaaaaacaagATCATGACG
TccttgaaaaacgaagaaaagaagATTTCAAGAATCGAGATTACAAAACT
GACTATTGGAAGCCTTGTGGTGGATTACGAAATTTACGGTACCGATACAT
TGAATAATGAAACTTTGAATGAAGGAATTAAGAAATCATTTTCTGACGAT
TCGAATCTTCAAACATCAACTGATACTCACTCTTTCTCTGGTACTATCGA
TCCTCAAAGCCAACAGTTAAACGCCATTGATAATTGCGCGTCTGAGCCTT
GTCATACAAATGCTACATGTACAAACAACGTTGAAAAGAATACTTTCTCT
TGTGAGTGTGACCAAGGATTTGAAGGTGATGGTTTCACGTGCTCAAGAAT
CATTGAACGAGTTGTACACAACGTTAAATTGAAAGATGACTGGTCAGACG
ATTCGATCATCATCGTAGCAGTGTTGTTCTCCGTTTGTTTTGTTGTGATT
GTTATCTTGGCTTTCTGTCTTTGTTGTTCCAAacGAAGTCAAAGCAAATC
ACAAAAGAAGAACGAATTTTCGAATTACTATTCAACTGACGTTCCCACAA
AAGAAAAAGTGCCGGAAACCGAACTCATGAACAATGTTTACATCAATGAT
GATGTCAATGGGAATAATTCTACGGTAACCGATCCTAACAAtccaaaata
tcaaaacattcgCCAAAACATGGTATAAATGTCTATTATATATAGCAAGA
CATTGACAATGATGCATTTTGGTCTTTGCTTTTCAGAGACTTTCGGAGTG
TCTGGTCAATTTACAATCAAAAAGCCATTTGTCAATGATGCGCCGTTATC
ACAAAAAGACCTTGATGATAAAACGTCTGACACTTACAAGTTCATGgttc
aaactttgaaaaacaagATCATGACGTccttgaaaaacgaagaaaagaag
ATTTCAAGAATCGAGATTACAAAACTGACTATTGGAAGCCTTGTGGTGGA
TTACGAAATTTACGGTACCGATACATTGAATAATGAAACTTTGAATGAAG
GAATTAAGAAATCATTTTCTGACGATTCGAATCTTCAAACATCAACTGAT
ACTCACTCTTTCTCTGGTACTATCGATCCTCAAAGCCAACAGTTAAACGC
CATTGATAATTGCGCGTCTGAGCCTTGTCATACAAATGCTACATGTACAA
ACAACGTTGAAAAGAATACTTTCTCTTGTGAGTGTGACCAAGGATTTGAA
GGTGATGGTTTCACGTGCTCAAGAATCATTGAACGAGTTGTACACAACGT
TAAATTGAAAGATGACTGGTCAGACGATTCGATCATCATCGTAGCAGTGT
TGTTCTCCGTTTGTTTTGTTGTGATTGTTATCTTGGCTTTCTGTCTTTGT
TGTTCCAAacGAAGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCGAA
TTACTATTCAACTGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGAAC
TCATGAACAATGTTTACATCAATGATGATGTCAATGGGAATAATTCTACG
GTAACCGATCCTAACAAtccaaaatatcaaaacattcgCCAAAACATGGT
ATAAATGTCTATTATATATAGCAAGACATTGACAATGATGCATTTTGGTC
TTTGCTTTTCAGAGACTTTCGGAGTGTCTGGTCAATTTACAATCAAAAAG
CCATTTGTCAATGATGCGCCGTTATCACAAAAAGACCTTGATGATAAAAC
GTCTGACACTTACAAGTTCATGgttcaaactttgaaaaacaagATCATGA
CGTccttgaaaaacgaagaaaagaagATTTCAAGAATCGAGATTACAAAA
CTGACTATTGGAAGCCTTGTGGTGGATTACGAAATTTACGGTACCGATAC
ATTGAATAATGAAACTTTGAATGAAGGAATTAAGAAATCATTTTCTGACG
ATTCGAATCTTCAAACATCAACTGATACTCACTCTTTCTCTGGTACTATC
GATCCTCAAAGCCAACAGTTAAACGCCATTGATAATTGCGCGTCTGAGCC
TTGTCATACAAATGCTACATGTACAAACAACGTTGAAAAGAATACTTTCT
CTTGTGAGTGTGACCAAGGATTTGAAGGTGATGGTTTCACGTGCTCAAGA
ATCATTGAACGAGTTGTACACAACGTTAAATTGAAAGATGACTGGTCAGA
CGATTCGATCATCATCGTAGCAGTGTTGTTCTCCGTTTGTTTTGTTGTGA
TTGTTATCTTGGCTTTCTGTCTTTGTTGTTCCAAacGAAGTCAAAGCAAA
TCACAAAAGAAGAACGAATTTTCGAATTACTATTCAACTGACGTTCCCAC
AAAAGAAAAAGTGCCGGAAACCGAACTCATGAACAATGTTTACATCAATG
ATGATGTCAATGGGAATAATTCTACGGTAACCGATCCTAACAAtccaaaa
tatcaaaacattcgCCAAAACATGGTATAAATGTCTATTATATATAGCAA
GACATTGACAATGATGCATTTTGGTCTTTGCTTTTCAGAGACTTTCGGAG
TGTCTGGTCAATTTACAATCAAAAAGCCATTTGTCAATGATGCGCCGTTA
TCACAAAAAGACCTTGATGATAAAACGTCTGACACTTACAAGTTCATGgt
tcaaactttgaaaaacaagATCATGACGTccttgaaaaacgaagaaaaga
agATTTCAAGAATCGAGATTACAAAACTGACTATTGGAAGCCTTGTGGTG
GATTACGAAATTTACGGTACCGATACATTGAATAATGAAACTTTGAATGA
AGGAATTAAGAAATCATTTTCTGACGATTCGAATCTTCAAACATCAACTG
ATACTCACTCTTTCTCTGGTACTATCGATCCTCAAAGCCAACAGTTAAAC
GCCATTGATAATTGCGCGTCTGAGCCTTGTCATACAAATGCTACATGTAC
AAACAACGTTGAAAAGAATACTTTCTCTTGTGAGTGTGACCAAGGATTTG
AAGGTGATGGTTTCACGTGCTCAAGAATCATTGAACGAGTTGTACACAAC
GTTAAATTGAAAGATGACTGGTCAGACGATTCGATCATCATCGTAGCAGT
GTTGTTCTCCGTTTGTTTTGTTGTGATTGTTATCTTGGCTTTCTGTCTTT
GTTGTTCCAAacGAAGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCG
AATTACTATTCAACTGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGA
ACTCATGAACAATGTTTACATCAATGATGATGTCAATGGGAATAATTCTA
CGGTAACCGATCCTAACAAtccaaaatatcaaaacattcgCCAAAACATG
GTATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_042663	XLOC_042663	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00068351-protein	TCONS_00068351-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_483	supercontig	scaffold_483:462747..468516 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.791364	0.681051	0.442696	0.366746	8.90064	6.41196	3.51482	4.70093	1.97068	2.40389	1.93942	0.563838	12.6231	15.268	1.66138	1.63754	0.449038	0.714278	1.42787	2.01882	1.83914	1.15513	1.36405	0.922003	1.22198	1.78809	2.75772	1.57435	0.813615	1.52806

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000742	EGF-like_dom
IPR001881	EGF-like_Ca-bd_dom
IPR024731	EGF_dom
IPR000082	SEA_dom
IPR013032	EGF-like_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00068351 vs. Swiss-Prot (Human)

BLAST of TCONS_00068351 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00068351 (transcript) - C. hemisphaerica