TCONS_00068371 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068371
Unique NameTCONS_00068371
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1947

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068371 ID=TCONS_00068371|Name=TCONS_00068371|organism=Clytia hemisphaerica|type=transcript|length=1947bp
GCTTTAATATTTGTGTTGAAAGACACAGTATAGATTATATCTTGGCGAAA
AGAGAAACTGGGTTGTTTTTTTGCAtaatcgaagaaaaaaaacgattttt
gttgtttatttagCAATAAAAAGAAGccTTATAAGGAGATGGTGACAACG
GACCAATCAAGATCGAATTCACCGGCCCATCATCATAGATCGATTGGCGA
GAGGCGTGGTGAAAAAAGAATGGATGAGCACGCCATCATTACGCGCTTGT
TTGCCGATGGTCGTTGTCTATGGCCTTCTTGTAATACCTCGTGTATGGAT
AAACACGATTTTGTAAGACACTTAGATACAACCCATGCAATGGACGAAAA
AGCAGCAGCTCAGGCTAGAGTTCAGAAATATGCCGTCGAAGAGTTGGAGG
AAAGGTTATCATATGAACGTTCAAGGCTGTCAGCCATGTTGGCACATTTG
GAATACGCTTCTGATAAAGGGTACGTTCTGCACAAGTCGGCTCATTCGGC
TTCTCCACCACCTCGATCAGGATCCGGACACCATCACCCAGTCAGTAACG
GAGGTGTGGTCTACCTACCCTACCCGCCACCGCCACACCATATCCACGCC
ATCCCCACCCACGTACCCGATGATCGTGTCAGTTCACCTCATCACCGTGA
AAGAGAAAGAGAGCGTGAGAGAGAACCACGATCTCCACCTCAATCGAACT
CGCCACGAAAACATTCTCACCATAAACCAGCCCCTGGCGGTCATTACCAC
TTACCGGCTCCACACTATTACCCAGTCCATCCAGCTTATCCAATCGGACG
GCCCGTAGCTTTAAAACGCGAATCGCCTGGAGACGAAAAAAGCCCTAAAG
ATGAGAGATACCCACCGCCCGGATTGATTGCCGCCCACCCAGAGGAATTA
ATACATCGACCAGCTATTGAGGCATCAGCACACCCACCAGGTCCACCATT
AACGCCCAAACAAGAAGGCGGATACCACCCTGTAAGGCGTCGTGGTGAGG
CGGCAGCTATGGTTGACATTGGGCATGAACTTCGCACAAAGGGTAATCTA
TACCAAGACCCAAACATCAGGCCACCTTACACGTATGCCTCACTTATTCG
ACAAGGTGTTTTAGACTCACCTAATGGAGAATTGACTTTAAACGAAATTT
ACAACTGGTTTATCAAAAACTTCGCTTTCTTCAGAAAGAACACTAGCACT
TGGAAGAATGCCGTTCGACACAACTTATCGCTACACAAATGTTTTGTTCG
AAAAGAAAATCACAAAGGAGCTGTATGGACGGTCGATGATGTTGAATTCT
TCAGGAGAAGAATGACAAAACCAGGACTACCACGAAGAGAATATTACGCG
CCCGAAGAACGCCCCAATTCTCCACCCGAAAGTGGTGGTGAATATGTGAC
GGATCTTCCATCTATGGCCATGTCAAGAAAGGAAGATTCAGAAGAAGATA
ATTCACCGCCACCTCCGCCCACGCAACAACATCACGCTCACGAAGAAAAC
GGTGAACAAGAAAATTCGATGGCAATCAAAGAAGAACGAGAAGAATACCT
CCAGCATGCaGATACAGTGATGGTGACATCTTGAGAGTTTCAACAGTGTT
GCAGTAACAATTATGGAGACTGACAGTTGGAGTTGGTAGTACTTGACAAT
GAATTCAACTTCGAGACCCCTTTTTTGGAAGTTCGTTACTTAAATTTAGT
ACTAGCCCATGTTGTATGTTATTTTctaataatatttattttatggACTT
TAGAGGATATAAATTTATCTCCTCGAATTTCTCGACAATCTCTCGAACtt
gaaaactattttctttttagcatAGAACTTTTTTAAGTGGGGCAAAAATT
TCTGTAGAACCTGTAGAAATCTCAATTTTCAAGAGATACCTTTTTTTGTT
ACAGTAATCCTccttttaaaaacctttgtttagtatattttgtttta
Run BLAST on NCBI

transcript from alignment at scaffold_483:77882..89226-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068371 ID=TCONS_00068371|Name=TCONS_00068371|organism=Clytia hemisphaerica|type=transcript|length=11345bp|location=Sequence derived from alignment at scaffold_483:77882..89226- (Clytia hemisphaerica)
GCTTTAATATTTGTGTTGAAAGACACAGTATAGATTATATCTTGGCGAAA
AGAGAAACTGGGTTGTTTTTTTGCATAATCGAAGAAAAAAAACGATTTTT
GTTGTTTATTTAGCAATAAAAAGAAGGTATGTAAAACACCAGTAACTATT
TTCTTTCCTATACGTTTTTATTTATGAAGCACCTATTGCAGGTTGCTCTG
TTGTTGAAAACTTCCTAAAGGCTAACCTTTGTGATTTCAAGCAGCACGAT
AGTAGAAAAACAAAAGGAAAACCTGCAAGAAGTTTACGCCTTCAGATGAC
CCTTCAATTATTGTTACATTAAAATAAACATCTGGCAAACAGTATGTGTT
GGTGAAACACAAAAAAACATTTTTTTTATGATTTGTAAAAAAAAAACTCT
GTTTCTCAAAGTAAATATGTGTGTTGAAGTCAGTTGGGCGCTTTATGTTC
GCTTTTCCTCTTTCAATCTCTTTCATTCATTGTGTTAGGATTTTTCAAAG
AAACAGTAGTAGTAACCCTTGTTGCAGTATCCGTGTGGCAGGGTTGGTGT
GAGTTTTGTTATCAGGTTTTCGTGGAAGCAACGTTTATGATGACCAAACT
ATAAGGATAGGTAATTTGTCTCAAGATTTTTAAATTTTTTATTTCTATAC
CTTCAACTAATCGGCGGCGTTGACAGAGGTTCGCCACTAAAATGCGACAA
ATCCTCCATGAGACTCCTAGACTGGAGTCGTTTATAATTTGTGTAATACA
GTAGTATAAGCATTATATGATAATACGATTATTGTTACGGGATTTAGTTT
GTATAAAACTAAAATTTGCTCCCTCCATTACTTTTTTCTACTATGTCTAA
ATTAGTCGTCTAGCTTACTCCCGTTAAATTCAATCCTGGTTTACATACCG
CCTTTCCTTATCATTAGGAGTTTTTGCCTAATTTACTTGTTCTATCTTTC
GAGTGACCTTACTAATGTAACATTTTTAAAACCGATTCTAAATTCTACTT
TTAATTGGCTTTTCTTAGGCGTATTCTTACATTTTGAGGAAGGCTTCTTT
TTTTCCGTACTTTATAGGCCTTTGACAACAAGGCGTTCTAATACTTCGAT
TCTTAAGCTCAGAACAGCAAACTAAGGTTGTCTCATATTGAAAGTGTTTT
GTTCAGAGTAAACATCCTATCGGAATTTAAATTCCCTGTGTTTAGCTCCT
TGCATAAAATATTAGATTTAACTTTTTTTTTACTGTTTTGATCTAAAAGC
TGCAAAGCCGTTTGGAGATTTAAAGTCACTTGGTACTGTTGAATATAGAC
CTTTAGGAATGACATATGTCGATAGTATTTTTACCCGAATTAAAGAGCTT
GATTTCTAAAAAAATACCTAGGCCTAGTTATTGAAAAAATGATCACTGCC
TAAATTTTAGCGTTCGTCATTTATTGGATATTCTTATAAAAAGAAGTTGA
CGGCCTAAGGGAAGCAATAGCAGTGAAACTATGTATTATGACGCGGTCTC
AATTTCAAAACAAACAAATAGAGATGTTTATGAAAGCTTTTCCAAACGAG
ACCTTTTCACCTTCCAAGACATGTCAATGAAATCTTACTGTTTTCAAATT
GAAACCAGCACCTTATGTTGATTCGCTACATGGTTTCTATTAACTAGAAA
GAGAAATTGTAAATGCAGCGCTGAGGGAAATAATCTGTGACCTTGCCTCG
AGTTTTTGGTAACACGTATGGCTCGTGCTTTTCAACCATCTACCCTGGCA
CTTTTCTAGCACCCTTGGGATATCCTTATTGCCCTCTTGTTAGTTAGCCT
TTTTAAAAGAACCGCTAAAAATTTTTCAAATTTTGACATTTTAAGAGCTT
TTAAACCTCAAACTTTTCCAGGCTCAGACCTCAATGTTCTTCTTAAATTG
TTCTTATCTTTTTGTCCGTTCTCATAAAAAAGGGTATCTGGTAGATCATT
CAGAATTTTTAATTCTAAATGTCAGCGTGAGAACCGGGTCATTCATTCGT
ATGAAACGTGGTTTCTACANTTTTAATTCAAAATGTCAGCGTGAGAACCA
GGTCATTCATTCGTATGAAGCGTGGTTTCTACGCAGGAACTGGATACGGC
CTTTAGTGGTGAGAGTTCGTGTTTTTAGAAATACAATTTTCACTGTTTAT
GGGTAAATAAATAAAAATAGAGTAAAAAAAGATGTCATTAACTGAAAAAA
GTTTTTCTTATATCACCTTACACTGAGCTCTTTCTTTCATTCATAAGAAC
AAATTGTCTGTTCTGATTATTCCAGATACTTATTTTGAACTCAGCTTATA
AGTTCTTTTGTATTGAAAATGATGTTCCAAAGACTGGCGCAACCCGATTC
TAGAAATTGTTCCGAAGAATAATCGAAAGTTAATAAGATAAGTGCCTTTG
AATGAAAATCGGTTCTTCAGTTTTTTTTGAGAATTCTTATAAAATAATTT
AAGAAATTTTGAAAAAGATTTTTTTTGTACAACATTGTTAGTGTTTATAA
GGTCACATTGTAAAATCAACATTATCATGCTTTAAAGAAAATAAAAATGG
TGACGATGATGGGCAATGATATAAAAATGTTTATCATAAATTATAAATTT
TTCTCTCGAATGCAACGTAATGTTTCTGATCTTGGATTCGTTCATTTAAG
ATTCTATTAATCTAGCTAACTTTTCTTTCAATTTTCGTCATTTTTGGCCT
GGTCACGAAGTTTTAATCTTCTTTTGTTTCGACATAGCTCTGATGGTTCT
TTTTTTCCAACCTTTTAATAGTTAAATATCTTTCTTTTAAATGCCACAGG
CGTTTTTCTGTCGTGCTTGGAAAATATTTCCAAAAGTAATTGGTTGGGTG
AGTATGATAAAAAATTGGCGTGTAGACGCTTCTTATTAAGTACCTGAATG
TTACAGTCAATGTTTCAAGGTAGATTATGGATGATGAATTCCTGCCTCAT
CTTTTCATCGAGGACCAACCCTTCCATTAGTTCGAATTATAGGAAAGATT
CGAGAGAAGTTCTGACAAGAGAAGACTGCCTGTATAGTACAGTTTACTCT
CGCTAATTTGAATTCGAACTGGGAATCTTATTTATTCGAATTATAGAAAT
TATTTTAAGAGGGTTTCTCCTTGACGGATACTGTAAAAAGCTCGATTTAT
AGAAAGATCTACTAAATATAGAAGTTCGAACTAGAGAAGGCTGACCGAAA
AAATGGGTAAAAGATATCTTTCAAAAAATGATGTTGTTGATGATAGGTTA
TAATAATGATGACAAAGTTTATGAAATTTTATTTGTTTGTTTTCTCGTCA
ATAATAAAAACGAACTTGTGTCAAAATAAGAAAATTACAGTACGGTTTTG
TTGTTGTGATGTAGTTCAAAAAAACTCATAAGCCTCTTAGTGTGTGTGTT
TACATGTCTATTTGATGAAGGGCTTAAAGTCAATCCTTTTTTTGTGTTTC
TATTGGTCATAAAAAACCACAATTGTGGTTTTGGATTATGGAGATTTATT
GATTTGTTGTTTTTGAATCGTACCAGGAATAATGATGGTTTTGTAAGACC
CTCCTCTTGAAATAATGACTTGTTTGCGTTTTGATTTTTAACCATGTTTG
CAAGTGATGTAAGGTTTTAAGTGTGTGTTGCTGGATCTAGACAGCTAAAT
CTTCTTGCAACCACTTTTTTTAACTTATGTACTATGTGTGCCAGTTGCCA
GTTGTTTTCATATAAAGTCACTAAATTTGTTTCGACGTTTGAAAATTTAG
TAGCCCCATCTGCTTGTCTTCATATCAAGACACTCGCCGTTTGAAAATAG
CGAGTTTATATACTTGCGTATTCGAGGACGGTAAAGTGACTGAAGCGATT
TGGAAAAACCCGCACTTCTGACTCGCAAAATCAAGGACGGTAAAAGTGCT
GATTTACCGTCGTCCTCGGCTGGTCAGGATCTAGTCAAATCAGAACCTTA
TCGTCTCCGTCGTAGAAAAACACACATAAATAAACTCGATACATTCCTCT
TACTATTACTTGCTTCACTTATACGAAACAGGAACTAAAATGCTCTTCCT
GCGCTTTTTTCTTTGGAATTCGTAGAAAATGTTTCAAGTTCTTGACGCCT
CTTCTGAAAGAAATAAATATACTTGCACTGTTGACTATAAAAAGCCACAA
TTAAGATTAATTTGACTGGATTATGATTGGAATTTAACTTTGATTTTGAT
AATTCAACCATTCTTTTAAATTCATCCTAATTCCTCTTCCAACAGAATAG
TAATGAAAATTGATAGAAACACAGATTTCTTAGAATTATCAACGAAAAAC
GTTACGGCAGACGAGGACCCAGAGAGCGGCGCCATTTTGAAAAAGGCGTC
ATTTATGGACCTAGAAAATTCATCACCCATTAATACAAACAACGGTGAAC
CACCACACAAGAAAGGGCGGAACAACATCCTAAATAACAACGAGGTTTTA
ACGCCCGTTGAAACCACCCAACACGCCCCAAATTACCGTGTTGACATGAA
ATTGAAAAGTCCGAGCCCGACTGAGGATGATTATATAAAATCAGATAAAG
TGCACACGCATCACGGTCGTGTTACGCACTATTATCGCGATGAACCGAAA
CATGACATGCTTCTCGCTGTCAAGGTAACTGCAACGGCAAAATTCATTCA
AAATACACCTATTGACATTTTTGCTTAAAAGCTTCGTGAATTTAGGGTTG
GGTTCGAGTTTGCCATGCTCGATTGTCGTCAGATGCTTGAATATCTGCAT
TAACATTCTCGCAGATACTAATATTTGACTGTCATCTAAACCTCGTAAAC
CCGATTAACGATCCCTTGTTCTCGAAGTACTGCAGGTTTATTTGAAAGAA
AATTCCGGCGAACGATCTTCTAAAAGTCCCTAACTTATTCTAGACGTTTA
TCTTTTTTTCTCGTACGGTAACACATAGTTTGGTTTTTACTCGCTAGTAG
CAAACCCTGTGCGACAAGTTACACTTTTCTGTAACCCGAAATTGTCTGCT
TCATATTGATTTTAATAATTTATTTTTTTTATTCAGCCTTATAAGGAGAT
GGTGACAACGGACCAATCAAGATCGAATTCACCGGCCCATCATCATAGAT
CGATGTATGTATTATTAAGCATCTGACTTGGAAAGTTACCCTCGGGCTTT
GTTTTTTAAGATTTTGCCTTCCTTTACCCTTTAGCTTTTTTGACTGTGCT
AAATTTCCACCAAAACTTTCATTTTTCTCATCTCACGTTCAATTACTTAA
TCTTACCATTGCATAACAACCCCGGGGGGGGGTGCTTAGGCAAATGGAGG
GCACGGTATGTGCCGCCCTTAAGGGTACCTTTTTTGGACTTCCAAAGTCC
CGCTAAGGGTCGGAAAAATCAGGAAATCTAATTTCAGTCCCACTAAGGGT
CGGAAAATTGGAGAATTTCAACTTTTTACCCCCTGAAAGATCAAAATTTG
GTCAAATTTGGTCAAATTAATCCCGCTAAGGGTCGTGAAATTCCCAAAAT
TTTCCTTTGTTTTCTCCTTTTTAGTCCCGGTAAGGGTCTAAAGTTCGAAA
GTCAGCTCGCAACCCTAGTACCCCCCGGGATAACAACTCTCTTTGTACTG
GTTAGAACAAGCATATCATGTCAATGTCGATATATTTTTTATGATGGTGT
GTAGGTGTAACTTCTTTACCCCTGCGTGAGCCTTTTGATGTTTACTGATA
GCGACATATAATTTTCTCTGGTGTCCATGAGTAACATGGAGTCTAGGATA
AAGGGACAAGCTGGAGTTTTTACAAGCTCTTTCTTGATTTGGTTGGTCGT
TAGCCTGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACGAGTCATCT
CTATTATCTTAAATGACCAATTAGTGAAGTACAAAAACTATATCTTATAA
AAACTCCAGAACATCTCAGGATAAACGGGGACGAGGTTGTGTTTAGGTAG
CAGGTAGACCCTTTCTACAAAAAAAAACAGGCAAATAACTGATTCTTCTA
TTGGTTTATTTTAGTGGCGAGAGGCGTGGTGAAAAAAGAATGGATGAGCA
CGCCAGTAAGTTACATTCCATACAAGTACTTGGTTCTTGCTATTGCACGC
CAATTATCTATACAAAACCTAGAGATAACAAAAGTAAAAAAGTGAATACT
TTGTATAATTTACTAACTCCCACTCTCAGAGTAAGACCTATAGATGCTTA
TTGTCCATGTAAAGTGTATTTTTTCTATTTTATACTACCGTTGACGCTCT
CTTATTCGACGTTGTACTATTCGATAGGCTCCCTTATTCGATGAAATTTA
AATTCTCCGTCAATAAGAAACTCTCATAAACGACGTTCTACTATTCGATA
AGCTCCCTTATTCGATGAAAATCCGATTCCCCTTGAAGATCGAATTAGAG
AGCGTCAACTGTATATCCTAACTTATTTTCACTTTTCTAGTCATTACGCG
CTTGTTTGCCGATGGTCGTTGTCTATGGCCTTCTTGTAATACCTCGTGTA
TGGATAAACACGATTTTGTAAGGTAAGCAAATCTAAAGAACGATAACAAT
TATTAATGAAAGTTTTTTGTTTCCTTTTCTATGAATTAGGAATTGTATCA
TCTTTTATCATATTAACACTATATTTTTCTGGATACTCATCTAACACAAT
CAAATTCCATAGGGTAATCACTTTTTTTGTCATGTTTTCGCCTTTAATTT
TGAATGAGATTCTATTTGGTAACTTAAAAAATGGTTACTAACGATTGAGT
TAATCGAAATTCAGTACTCATCCACACCTGAAAATTGCAGTTGTTATTAT
CCATTGGAACTTGATTTTTACCAAATTTTCCCATGTTGACAGTCGTTACA
TGGAATTAAACGAAATAAAGAGATTTTTACAACCGATGAACGTTTTCCTT
TACGATTTAGACACTTAGATACAACCCATGCAATGGACGAAAAAGCAGCA
GCTCAGGCTAGAGTTCAGAAATATGCCGTCGAAGAGTTGGAGGAAAGGGT
AAGATGTTTTTAGTTTATCATCTTAGTATCTTAGACCATAAAAGGTTTCA
TGTTTACAACTTTTTGTCTTATGCTTAACTTGAAACTTCATTCAATTGGA
GATGTTTTCTCCAATTGAGTATGTATTGATTGCTTTTACTTTCCAAAAGA
GGACTCAGGGTAATGTAGAATAGATTTTATAAAGGCTTCTTTCATTCTTC
CTTTTTAGTTATCATATGAACGTTCAAGGCTGTCAGCCATGTTGGCACAT
TTGGAATACGCTTCTGATAAAGGGTACGTTCTGCACAAGTCGGCTCATTC
GGCTTCTCCACCACCTCGATCAGGATCCGGACACCATCACCCAGTCAGTA
ACGGAGGTGTGGTCTACCTACCCTACCCGCCACCGCCACACCATATCCAC
GCCATCCCCACCCACGTACCCGATGATCGTGTCAGTTCACCTCATCACCG
TGAAAGAGAAAGAGAGCGTGAGAGAGAACCACGATCTCCACCTCAATCGA
ACTCGCCACGAAAACATTCTCACCATAAACCAGCCCCTGGCGGTCATTAC
CACTTACCGGCTCCACACTATTACCCAGTCCATCCAGCTTATCCAATCGG
ACGGCCCGTAGCTTTAAAACGCGAATCGCCTGGAGACGAAAAAAGCCCTA
AAGATGAGAGATACCCACCGCCCGGATTGATTGCCGCCCACCCAGAGGAA
TTAATACATCGACCAGCTATTGAGGCATCAGCACACCCACCAGGTCCACC
ATTAACGCCCAAACAAGAAGGCGGATACCACCCTGTAAGGCGTCGTGGTG
AGGCGGCAGCTATGGTTGACATTGGGCATGGTAAGGAAGACATAGGTTAT
CGTGAGTTGACGTTCTTCTCTTCTAATTTTTAACTCAGACCCCTTTTTTT
AGAAGTTTCGTAAAATGAGGTTTTTCAAATTTTTTATATAAAACGATTCT
CAAGTTTAAATTTTTTTTACAAAGTCACAGTGACTCTATTTCGAGTTTTG
TATTCTATTTGCAAGTTCGATTTTAATTAGTCTCGTTATGCCGTAACATT
TCAGTATCATTTAGAATTATGACCCTCTTCAATTCGTTCAAATACTAAAG
ATTAACTTTTTCCCCCTTTTTTCACTATCCAGAACTTCGCACAAAGGGTA
ATCTATACCAAGACCCAAACATCAGGCCACCTTACACGTATGCCTCACTT
ATTCGACAAGGTGTTTTAGACTCACCTAATGGAGAATTGACTTTAAACGA
AATTTACAACTGGTTTATCAAAAACTTCGCTTTCTTCAGAAAGAACACTA
GCACTTGGAAGGTTGGTTTGAGTATTCATTTTTACGGTACAGGGAAGGAG
GAACTATCTTTTAAGGTTCAGAGATAAAATTTGCATGCTAAGAAATGGAG
AAAATCTACAGTAGCCTCTCGCGTATTCGAACTCCTATAATTCGAATCCT
TCTACCATTCAAACTAATTCTCAGCTCCCACCAAGGGAAACCCTCATAAA
CACTTTCTCTAGTTAGTGAATCTCTCTGTAATCTGAACAAAGAATTAATT
GGGCTCTTAACTGTAAGATTTTTCATGGTATCATATATTTGACCGTATTA
TAAAAATTCTATTGTATAGAATGCCGTTCGACACAACTTATCGCTACACA
AATGTTTTGTTCGAAAAGAAAATCACAAAGGAGCTGTATGGACGGTCGAT
GATGTTGAATTCTTCAGGAGAAGAATGACAAAACCAGGACTGTAAGTTCA
ATTTGAAATCAATAACGAACCAGGGGGTTCAGGGTTTCTTTTTAAACTTG
TCACGTTTGTCCAAAAATTGTTTAAGGAAGGGAAGCTTGTTTGTAAGCCG
ATTCACCACCAAAGACAACTTAAAATAATTTTTCAAAATTCATTCTGATT
CAGACCACGAAGAGAATATTACGCGCCCGAAGAACGCCCCAATTCTCCAC
CCGAAAGTGGTGGTGAATATGTGACGGATCTTCCATCTATGGCCATGTCA
AGAAAGGAAGATTCAGAAGAAGATAATTCACCGCCACCTCCGCCCACGCA
ACAACATCACGCTCACGAAGAAAACGGTGAACAGTAAGTACAACCTGTAA
TTTGTCACACGCTTTTGCATTAGAAGTTTGCGAAACTTGAGCCTTTTGAG
TTCACAATTTTTTCGATCTTACTTTCCAACCAGTTCTACAATTGTTTGCA
ATGGTTTATGCCTAGTCCTTTAGTATTCTTGAAACTTGACAGATCAAAAT
CTTGACAGGGGTCTATGAAATTAGCTCGTTTTATAGATTTTATTTCAAAC
ATTCCGTCTTCGATAATGCTATTTATACCCATAATGCATCGTATAGAGAA
AATAAGAACTGCAGTGGATTGTAGATTTCGTTTCAATAATACATCACAGA
ATTTACTAGATTAAAGCACGTGTTGAAATGATTGTTTCTCGTTTTTGTTT
ACAGAGAAAATTCGATGGCAATCAAAGAAGAACGAGAAGAATACCTCCAG
CATGCGTAAGTCTACTTTGACCTTCCTTTTTATATATCAGAAATCCACCA
TTATGGATTAAAGCAACCGATTCGAAGAGATGATTGGTTAAGCGAATCGA
ATGTCTTCCATAATAGTGGGGGTTAAGGGTTAGGGTTTACTGAAAACCAC
TACACGTTTTTTTTTTTATTAGAACCTAGTTTACAAGAACATATAGGCTG
AAATTCGTCGAAAAATTAAGAACATCTTAAGAACATGCCCAGCCTCCGTT
TGGAAAAAAATGACAAGAAACTACAATTTCTTCCTCTTTTTAAGCAGTTT
TTAACCGAATTTAGGGGTGGATCTTCAAAAGTCGAGTGTCAAATATTGTC
TAAATTTTGCTAAATTTAAGTGCTCTTTATTTTGTATCATATTGTCGATT
TACAGTAGTCTGAAAAATTAATAACGCATTTAAGAACATTTTAGGCTGAA
AATTGCTAAAAAAATAAGCACATCAGAGCTCGAACCGGTGATGGATTCCG
GTCAAAGACAATCCTATTATTAAGAATTTTCTGTAGACTGGTTGCTGTAG
AAATCTTTTCAATAATACTGTGTAATTATAGATTCTGAGCGGGACTACTT
CCTGAAAATCAACATTTTGAGAGCAGTGGCGTTGTGGGAAAATTTTTCTG
GAGGGGCCAAAGTCAATTTTTTTTAAATGGCGCCCCCCCCCCTCCAATTT
TTCAAAGTGGTGTCCCCACCCATCATTTTCTAAACTTTTACCAAATTCAT
TTGCCTAGGCATAATGAGGAAGGAAATATTTAGTGGAGAAAAGTAGATTT
ATCTTTGATGAATGGAAAAGGGAAAAACAGGCCCCACCATGGTTGGGGCC
GACTAGAAAATATTTTTAAATCAACTGCCAAGATACCCTAAATCACTAAA
TAAAAATAGACAAATTTTACACTTGCTAGAGTGAAATGAAACTTAAAGAA
ACAATGTGTTATGCGAGCGAAGCGAGCGAAAAAATAGATGTTTTATGATT
TCAATATTGTTGTCAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATATTGTTGTCA
GCAGATTGGTCTTGGGACGCAGTTAGCTTTACATTTAATAATGCTATATT
GTACACAAAAAAAACTTGTAAATTAGCTAGATATCAAAAAAGTTACCACT
TAACTGTATTGCGAGCGAAGCGAGCGAAAAAAATTGCAATTATATTTANN
GGGGGGGGCCATGGCCCCCCCGGCCCCCCCTGCCACAACGCCACTGTTTG
AGAGGTATTAATCTCGGGATATTTCCCAGATTTCAGGATTTTTCCTCTTT
GTAACCCTCAGAGGGCGACTGAAATTAATACTATTATTCTTTTTTTTTTC
TTTACAGAGATACAGTGATGGTGACATCTTGAGAGTTTCAACAGTGTTGC
AGTAACAATTATGGAGACTGACAGTTGGAGTTGGTAGTACTTGACAATGA
ATTCAACTTCGAGACCCCTTTTTTGGAAGTTCGTTACTTAAATTTAGTAC
TAGCCCATGTTGTATGTTATTTTCTAATAATATTTATTTTATGGACTTTA
GAGGATATAAATTTATCTCCTCGAATTTCTCGACAATCTCTCGAACTTGA
AAACTATTTTCTTTTTAGCATAGAACTTTTTTAAGTGGGGCAAAAATTTC
TGTAGAACCTGTAGAAATCTCAATTTTCAAGAGATACCTTTTTTTGTTAC
AGTAATCCTCCTTTTAAAAACCTTTGTTTAGTATATTTTGTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042667XLOC_042667Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068371-exon-scaffold_483-1575043694:89101..89226TCONS_00068371-exon-scaffold_483-1575043694:89101..89226Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:84123..84190TCONS_00068371-exon-scaffold_483-1575043694:84123..84190Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:83172..83212TCONS_00068371-exon-scaffold_483-1575043694:83172..83212Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:82705..82786TCONS_00068371-exon-scaffold_483-1575043694:82705..82786Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:82229..82316TCONS_00068371-exon-scaffold_483-1575043694:82229..82316Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:81397..82018TCONS_00068371-exon-scaffold_483-1575043694:81397..82018Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:80916..81094TCONS_00068371-exon-scaffold_483-1575043694:80916..81094Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:80486..80607TCONS_00068371-exon-scaffold_483-1575043694:80486..80607Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:80144..80323TCONS_00068371-exon-scaffold_483-1575043694:80144..80323Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:79722..79772TCONS_00068371-exon-scaffold_483-1575043694:79722..79772Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1575043694:77882..78269TCONS_00068371-exon-scaffold_483-1575043694:77882..78269Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:89101..89226TCONS_00068371-exon-scaffold_483-1510915933:89101..89226Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:84123..84190TCONS_00068371-exon-scaffold_483-1510915933:84123..84190Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:83172..83212TCONS_00068371-exon-scaffold_483-1510915933:83172..83212Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:82705..82786TCONS_00068371-exon-scaffold_483-1510915933:82705..82786Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:82229..82316TCONS_00068371-exon-scaffold_483-1510915933:82229..82316Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:81397..82018TCONS_00068371-exon-scaffold_483-1510915933:81397..82018Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:80916..81094TCONS_00068371-exon-scaffold_483-1510915933:80916..81094Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:80486..80607TCONS_00068371-exon-scaffold_483-1510915933:80486..80607Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:80144..80323TCONS_00068371-exon-scaffold_483-1510915933:80144..80323Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:79722..79772TCONS_00068371-exon-scaffold_483-1510915933:79722..79772Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1510915933:77882..78269TCONS_00068371-exon-scaffold_483-1510915933:77882..78269Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:89101..89226TCONS_00068371-exon-scaffold_483-1491911889:89101..89226Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:84123..84190TCONS_00068371-exon-scaffold_483-1491911889:84123..84190Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:83172..83212TCONS_00068371-exon-scaffold_483-1491911889:83172..83212Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:82705..82786TCONS_00068371-exon-scaffold_483-1491911889:82705..82786Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:82229..82316TCONS_00068371-exon-scaffold_483-1491911889:82229..82316Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:81397..82018TCONS_00068371-exon-scaffold_483-1491911889:81397..82018Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:80916..81094TCONS_00068371-exon-scaffold_483-1491911889:80916..81094Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:80486..80607TCONS_00068371-exon-scaffold_483-1491911889:80486..80607Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:80144..80323TCONS_00068371-exon-scaffold_483-1491911889:80144..80323Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:79722..79772TCONS_00068371-exon-scaffold_483-1491911889:79722..79772Clytia hemisphaericaexon
TCONS_00068371-exon-scaffold_483-1491911889:77882..78269TCONS_00068371-exon-scaffold_483-1491911889:77882..78269Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_483supercontigscaffold_483:77882..89226 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.567	5.58842	6.12444	6.22229	5.74064	2.71215	0.00692118	0	11.3223	6.87474	2.93688	7.39007	0.485456	1.29166	1.36301	2.37908	5.06985	2.58394	2.7518	2.17708	6.9013	0.867474	3.73956	6.43605	1.22507	0.00951935	0.000259595	1.09186	2.25232	1.84773
Blast
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BLAST of TCONS_00068371 vs. Swiss-Prot (Human)
Match: FOXP4 (Forkhead box protein P4 OS=Homo sapiens GN=FOXP4 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.316e-43
Identity = 81/151 (53.64%), Postives = 101/151 (66.89%), Query Frame = 1 
Query:  883 AHPEELIHRPAIEASAHPPGPPLTPKQEG-----GYHPVRRRGEAAAMVDIGHELRTKGNLYQDPNIRPPYTYASLIRQGVLDSPNGELTLNEIYNWFIKNFAFFRKNTSTWKNAVRHNLSLHKCFVRKENHKGAVWTVDDVEFFRRRMTK 1320
            + P+ L+H P    SA  P  PL P   G     G  P RRR        I  EL      Y++ ++RPP+TYASLIRQ +L++P+ +LTLNEIYNWF + FA+FR+NT+TWKNAVRHNLSLHKCFVR EN KGAVWTVD+ E+ +RR  K
Sbjct:  403 SFPDGLVHPPT---SAAAPVTPLRPPGLGSASLHGGGPARRRSSDKFCSPISSELAQNHEFYKNADVRPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEREYQKRRPPK 550
The following BLAST results are available for this feature:
BLAST of TCONS_00068371 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXP49.316e-4353.64Forkhead box protein P4 OS=Homo sapiens GN=FOXP4 P... [more]
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