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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068564 ID=TCONS_00068564|Name=TCONS_00068564|organism=Clytia hemisphaerica|type=transcript|length=1396bp
CTCGATAATAGCCAGTCTTCATAGCAGATCTCACAAAGTCTATAAAAAGT
TCGAATCTATTAGAGGATGCAAGCTACCTGGCATTCATACTCAAATTAAC
CATAAACTTTTCTCTCGTAATTCAAGTTACCCCAGATATAGGAAAGCAAA
AAAACGACTACTTCCATTCCTTCAAAACAGTAGCAATCGACATTGAAAGA
CGTACAATAAATGTAAACGATATTTTTGTTGTTGGCTTGACAAAGTCATG
TAAGATTTTCGCAATACGAGAAATACTTTGACGAAAGGCAGTAACCTGAC
CTCTTTGATGTGtataaacaaagaaagattACACAATAACAATCTCCATG
TCAACCCTAAAGCTTCAAAGTTGTGTAAAGTAACAAAAATTTACCATTCT
TTTAATCTTTCTTCATCCCTCAACATCACCAAGGAATGCCTACTTGAGCG
CATCTTCAAAGCTTAGTCATATTTTGGCGGATTCATTGAGGTGCTCTACa
ttggtttaatttgggattcgTTGCTATGGAATAGAGAGTCTTTGCAACAT
ACGGGTAGGCCTCTCAGAACGGAAACGAACACGTGTCAGATTGTAAGTTA
TCATATACATTAGATTGAAGACAATGTTACTTTGTACACTACGGTGCATG
ATTTTTgtcttcttaaaaaaaacaacaacaatagaTGTCCCGTTAAAAGT
CCAGGAGCTGCATATAAGCAAACTGACTTCGTCCAAAGACTAAGAATTTC
TGGAtatctactctcgggtacctaatagccggggggtttggaataagcag
ggggggttggaaaaaatctcaaaatttaataagcgggggggttggaataa
aaatgtcctgggtggaaaatgttcgaaaaggaggctgatacagcagaata
agggcaaaagagggaactttcaaaaaaaaattccccaaaaatcaataagc
gggggggttggaataagaatgtcctgggtggaaaattttcgaaagattaa
TTAGCGGCCCCctcccggctattaggtacccgagagtaatccATAAGATG
TAAACCCCATCCATGAAATTCAACGGAAGAGCGATATTCTTGCCCAGCCT
ACTCGTCAACAAAGCGACTAATCGTCAATACTATACACAAAACGTAGTAA
AAAACCTTCAGCTGACAAAACCCTCCCAAACAAATAGTTTAACAACTTTA
TGTGAATGTACTACAACAAGATTTCAAGCATAACAAACCCCTGTAATGGC
GGATCAACTCTTATGTCAGTCACGATAAGTCGAATTAGAATGACAAAATA
AAGCTTAGAAATTACTTAATGATCGAGACATTAATATTgattaaaatgtt
ttctttgctGATCCGTCAAAATATGAGCTTTCTAACAGCTTTTCTT Run BLAST on NCBI transcript from alignment at scaffold_485:234524..235919 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068564 ID=TCONS_00068564|Name=TCONS_00068564|organism=Clytia hemisphaerica|type=transcript|length=1396bp|location=Sequence derived from alignment at scaffold_485:234524..235919 (Clytia hemisphaerica)
AAGAAAAGCTGTTAGAAAGCTCATATTTTGACGGATCagcaaagaaaaca
ttttaatcAATATTAATGTCTCGATCATTAAGTAATTTCTAAGCTTTATT
TTGTCATTCTAATTCGACTTATCGTGACTGACATAAGAGTTGATCCGCCA
TTACAGGGGTTTGTTATGCTTGAAATCTTGTTGTAGTACATTCACATAAA
GTTGTTAAACTATTTGTTTGGGAGGGTTTTGTCAGCTGAAGGTTTTTTAC
TACGTTTTGTGTATAGTATTGACGATTAGTCGCTTTGTTGACGAGTAGGC
TGGGCAAGAATATCGCTCTTCCGTTGAATTTCATGGATGGGGTTTACATC
TTATggattactctcgggtacctaatagccgggagGGGGCCGCTAAttaa
tctttcgaaaattttccacccaggacattcttattccaacccccccgctt
attgatttttggggaatttttttttgaaagttccctcttttgcccttatt
ctgctgtatcagcctccttttcgaacattttccacccaggacatttttat
tccaacccccccgcttattaaattttgagattttttccaaccccccctgc
ttattccaaaccccccggctattaggtacccgagagtagataTCCAGAAA
TTCTTAGTCTTTGGACGAAGTCAGTTTGCTTATATGCAGCTCCTGGACTT
TTAACGGGACAtctattgttgttgttttttttaagaagacAAAAATCATG
CACCGTAGTGTACAAAGTAACATTGTCTTCAATCTAATGTATATGATAAC
TTACAATCTGACACGTGTTCGTTTCCGTTCTGAGAGGCCTACCCGTATGT
TGCAAAGACTCTCTATTCCATAGCAAcgaatcccaaattaaaccaatGTA
GAGCACCTCAATGAATCCGCCAAAATATGACTAAGCTTTGAAGATGCGCT
CAAGTAGGCATTCCTTGGTGATGTTGAGGGATGAAGAAAGATTAAAAGAA
TGGTAAATTTTTGTTACTTTACACAACTTTGAAGCTTTAGGGTTGACATG
GAGATTGTTATTGTGTaatctttctttgtttataCACATCAAAGAGGTCA
GGTTACTGCCTTTCGTCAAAGTATTTCTCGTATTGCGAAAATCTTACATG
ACTTTGTCAAGCCAACAACAAAAATATCGTTTACATTTATTGTACGTCTT
TCAATGTCGATTGCTACTGTTTTGAAGGAATGGAAGTAGTCGTTTTTTTG
CTTTCCTATATCTGGGGTAACTTGAATTACGAGAGAAAAGTTTATGGTTA
ATTTGAGTATGAATGCCAGGTAGCTTGCATCCTCTAATAGATTCGAACTT
TTTATAGACTTTGTGAGATCTGCTATGAAGACTGGCTATTATCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068564-exon-scaffold_485-1491911889:234524..235919 | TCONS_00068564-exon-scaffold_485-1491911889:234524..235919 | Clytia hemisphaerica | exon |
| TCONS_00068564-exon-scaffold_485-1510915933:234524..235919 | TCONS_00068564-exon-scaffold_485-1510915933:234524..235919 | Clytia hemisphaerica | exon |
| TCONS_00068564-exon-scaffold_485-1575043694:234524..235919 | TCONS_00068564-exon-scaffold_485-1575043694:234524..235919 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:234524..235919 . |
Blast
The following BLAST results are available for this feature:
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