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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068581 ID=TCONS_00068581|Name=TCONS_00068581|organism=Clytia hemisphaerica|type=transcript|length=1338bp
gacaggggtgtatttataATTCACTTTGGCTTTTTAggtgaagataaaaa
aaacaaagactatCATTATTGGCAAGCCATGGTAAAAGAGATAGCATATG
TATGGCCTCCTCAACAATGCttcgaatcaaaacaaatttctcaTTTCAGT
TCGACTAATGGAAAACTTGAAACCATAGCAACAGTGCTGACATTTGTCTT
CACAGTTACGCTAAACTCCTTGCTACTTTATGCTTTAATAAAGACGAAAA
ATACGAAAAATTTCACCAGTCGATTTCTGATCATCATTGCTTGTGGAGAT
TTGTTAATGGCATGCTCAATCATACCTTTGCATCTGTATAATGTGTATGA
AGGAACGCTGAACAGTTGCCAGAATCTGAGGCTTGTTGAAGACCTCCTCT
ATGTTTTGTGTGGCACAACTACCGCCTCGCTAACCCTCGGTATATGCATT
GACCGATATCTATTCATTCGCTACTCATTCCAATACTCGCGCATCATTCA
AGAAAAGACAGCCATCTTTAATGCTTACGTCATTATTTCATTCCTTTTGA
CGTCATCCATAATGGTAGCTAATGTTTTGCATAAAGTAATTTTTCGGTTC
ATGATAGTTATTTATGTTGATTTGGTGGCTTTCTCGTCCCTCGTGATCAA
CATTTATTTAGTTTGTTACATtcgaaaaaaaggtaaaaatataCGTCATA
TCACGCGGACACCCGTACGCGCACGTTATCAGCGGCGTGCGCTTCAAACA
ATGATGATAATCACAggttttttagtgattacttATCTACCAATGatctg
tttatttacttttgctATTTATTGGGAGTATTCGAACGATAAGAAAAAAG
TGGAACCCATAGCATCCGTTCTGGTCGTATCCAACTGGTCACGATTGGCG
GTCTTTTTAAATGCTAGTTTGAACGCTCTGGTTTACATATCCAGAAATGA
GGATATAAGAAAACTCTATAGAAAAATGTTTTGCGCGAAACTCAAGAAGT
TTGGTGAACGTGGAAAAAAGTGATCTTTCATGCCGTGGTAAAGACGACAT
TGATAATTCAAAGGTGACGTAACTTCTTAACGCGAGGTTAAAGAATTCAG
CTTTATCCAGCTTCTGTGGCAATGGCAACGTGGAAATGTGAGATGATAGA
AACAGAACATAAAAAAAGCTAAGCTGAATATCCAACCTGTAAAAgtcctt
tttttttgttttgatgtctcTTCTGTTTATTGCTAGGTGTTTAATgcttg
taaacccagggtaattGAATCGTCAATTTTATAAAGCACTAAGGTTCTCC
CGtctgatgaaaaaaaaacaattcaattcAGAAAGGCA Run BLAST on NCBI protein sequence of TCONS_00068581-protein >TCONS_00068581-protein ID=TCONS_00068581-protein|Name=TCONS_00068581-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
DRGVFIIHFGFLGEDKKNKDYHYWQAMVKEIAYVWPPQQCFESKQISHFS
STNGKLETIATVLTFVFTVTLNSLLLYALIKTKNTKNFTSRFLIIIACGD
LLMACSIIPLHLYNVYEGTLNSCQNLRLVEDLLYVLCGTTTASLTLGICI
DRYLFIRYSFQYSRIIQEKTAIFNAYVIISFLLTSSIMVANVLHKVIFRF
MIVIYVDLVAFSSLVINIYLVCYIRKKGKNIRHITRTPVRARYQRRALQT
MMIITGFLVITYLPMICLFTFAIYWEYSNDKKKVEPIASVLVVSNWSRLA
VFLNASLNALVYISRNEDIRKLYRKMFCAKLKKFGERGKK Run BLAST on NCBI transcript from alignment at scaffold_485:443300..444637 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068581 ID=TCONS_00068581|Name=TCONS_00068581|organism=Clytia hemisphaerica|type=transcript|length=1338bp|location=Sequence derived from alignment at scaffold_485:443300..444637 (Clytia hemisphaerica)
TGCCTTTCTgaattgaattgtttttttttcatcagaCGGGAGAACCTTAG
TGCTTTATAAAATTGACGATTCaattaccctgggtttacaagcATTAAAC
ACCTAGCAATAAACAGAAgagacatcaaaacaaaaaaaaaggacTTTTAC
AGGTTGGATATTCAGCTTAGCTTTTTTTATGTTCTGTTTCTATCATCTCA
CATTTCCACGTTGCCATTGCCACAGAAGCTGGATAAAGCTGAATTCTTTA
ACCTCGCGTTAAGAAGTTACGTCACCTTTGAATTATCAATGTCGTCTTTA
CCACGGCATGAAAGATCACTTTTTTCCACGTTCACCAAACTTCTTGAGTT
TCGCGCAAAACATTTTTCTATAGAGTTTTCTTATATCCTCATTTCTGGAT
ATGTAAACCAGAGCGTTCAAACTAGCATTTAAAAAGACCGCCAATCGTGA
CCAGTTGGATACGACCAGAACGGATGCTATGGGTTCCACTTTTTTCTTAT
CGTTCGAATACTCCCAATAAATagcaaaagtaaataaacagatCATTGGT
AGATaagtaatcactaaaaaaccTGTGATTATCATCATTGTTTGAAGCGC
ACGCCGCTGATAACGTGCGCGTACGGGTGTCCGCGTGATATGACGtatat
ttttacctttttttcgaATGTAACAAACTAAATAAATGTTGATCACGAGG
GACGAGAAAGCCACCAAATCAACATAAATAACTATCATGAACCGAAAAAT
TACTTTATGCAAAACATTAGCTACCATTATGGATGACGTCAAAAGGAATG
AAATAATGACGTAAGCATTAAAGATGGCTGTCTTTTCTTGAATGATGCGC
GAGTATTGGAATGAGTAGCGAATGAATAGATATCGGTCAATGCATATACC
GAGGGTTAGCGAGGCGGTAGTTGTGCCACACAAAACATAGAGGAGGTCTT
CAACAAGCCTCAGATTCTGGCAACTGTTCAGCGTTCCTTCATACACATTA
TACAGATGCAAAGGTATGATTGAGCATGCCATTAACAAATCTCCACAAGC
AATGATGATCAGAAATCGACTGGTGAAATTTTTCGTATTTTTCGTCTTTA
TTAAAGCATAAAGTAGCAAGGAGTTTAGCGTAACTGTGAAGACAAATGTC
AGCACTGTTGCTATGGTTTCAAGTTTTCCATTAGTCGAACTGAAAtgaga
aatttgttttgattcgaaGCATTGTTGAGGAGGCCATACATATGCTATCT
CTTTTACCATGGCTTGCCAATAATGatagtctttgttttttttatcttca
ccTAAAAAGCCAAAGTGAATtataaatacacccctgtc Coding sequence (CDS) from alignment at scaffold_485:443300..444637 >TCONS_00068581 ID=TCONS_00068581|Name=TCONS_00068581|organism=Clytia hemisphaerica|type=CDS|length=1023bp|location=Sequence derived from alignment at scaffold_485:443300..444637 (Clytia hemisphaerica)
TCACTTTTTTCCACGTTCACCAAACTTCTTGAGTTTCGCGCAAAACATTT
TTCTATAGAGTTTTCTTATATCCTCATTTCTGGATATGTAAACCAGAGCG
TTCAAACTAGCATTTAAAAAGACCGCCAATCGTGACCAGTTGGATACGAC
CAGAACGGATGCTATGGGTTCCACTTTTTTCTTATCGTTCGAATACTCCC
AATAAATagcaaaagtaaataaacagatCATTGGTAGATaagtaatcact
aaaaaaccTGTGATTATCATCATTGTTTGAAGCGCACGCCGCTGATAACG
TGCGCGTACGGGTGTCCGCGTGATATGACGtatatttttacctttttttc
gaATGTAACAAACTAAATAAATGTTGATCACGAGGGACGAGAAAGCCACC
AAATCAACATAAATAACTATCATGAACCGAAAAATTACTTTATGCAAAAC
ATTAGCTACCATTATGGATGACGTCAAAAGGAATGAAATAATGACGTAAG
CATTAAAGATGGCTGTCTTTTCTTGAATGATGCGCGAGTATTGGAATGAG
TAGCGAATGAATAGATATCGGTCAATGCATATACCGAGGGTTAGCGAGGC
GGTAGTTGTGCCACACAAAACATAGAGGAGGTCTTCAACAAGCCTCAGAT
TCTGGCAACTGTTCAGCGTTCCTTCATACACATTATACAGATGCAAAGGT
ATGATTGAGCATGCCATTAACAAATCTCCACAAGCAATGATGATCAGAAA
TCGACTGGTGAAATTTTTCGTATTTTTCGTCTTTATTAAAGCATAAAGTA
GCAAGGAGTTTAGCGTAACTGTGAAGACAAATGTCAGCACTGTTGCTATG
GTTTCAAGTTTTCCATTAGTCGAACTGAAAtgagaaatttgttttgattc
gaaGCATTGTTGAGGAGGCCATACATATGCTATCTCTTTTACCATGGCTT
GCCAATAATGatagtctttgttttttttatcttcaccTAAAAAGCCAAAG
TGAATtataaatacacccctgtc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068581-exon-scaffold_485-1491911889:443300..444637 | TCONS_00068581-exon-scaffold_485-1491911889:443300..444637 | Clytia hemisphaerica | exon |
| TCONS_00068581-exon-scaffold_485-1510915933:443300..444637 | TCONS_00068581-exon-scaffold_485-1510915933:443300..444637 | Clytia hemisphaerica | exon |
| TCONS_00068581-exon-scaffold_485-1575043694:443300..444637 | TCONS_00068581-exon-scaffold_485-1575043694:443300..444637 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:443300..444637 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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