TCONS_00068605 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068605
Unique NameTCONS_00068605
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1310

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068605 ID=TCONS_00068605|Name=TCONS_00068605|organism=Clytia hemisphaerica|type=transcript|length=1310bp
TAGATCGTTTGTTTctattttattcataaaatctGGATTACATTTCAGGC
GCTTCGCGCCCTTACGTAATCCTCAATTTTTCTATACCAACGGAATGTTG
CTTGAAAATACTTCGCCGTACAACAGTTTATTTTTCAATTCCAAGAAACC
GGAATAAAGATTCTGgaagattttgcttgattatTTCTTCCTCATTGAAC
GAGGTCAAAACAGCAAGACGCGCAAAACATTTCAGAGTTAAGCCAATATT
TGGGAAAACAATCTTATGAGCTTTGAACAACATCTCATCTTGGCCACCCT
CCTCGTGATTGCTTACATAGAACCCAGTATAAACCAATTCCTTTAAATNT
GTCTTCGTGATTGCTTACATAGAACCCAGTATAAACCAATTCCTTCAAAT
TCCAATTTAATGAAAACGTCTGCATTTCATCATTTGGATTTACATTAATC
TCACTTGAAATCTGTTTGCTATTCAagtcaaacagaaaaaaattcgtCGA
TGAATTGTCTGGCTCGTAAAGTAGGGGAATCAAAAGACGTCCAAATTTTA
ATATTGGACTACCAGGAAAATCGACTTTAGTAATTTTAAGGTTTACAGGA
AGTTTGAATTCTTGACTGGATCCAATATGACCCTCTAGAAGTCTTTGCAT
GCAAAAAATTCCTGATTTGCCGTAGAAAATGACAATCATTGAATCACCTT
CTCCAGATTGTAATAAAGACTGATAATTATACAAACTAGAATCCCATGCC
AGTATATATGAAAATACAATTTTCCCATTAAGATCaacttcaaatatttt
gtaCGTTTTAGCAGATTTTGCAGAAAAAtacagcctttgttttgaatata
aGATCTTCATTGGATGGTAAATACCGGAAGAAGAAATCTCCAAATCGCAT
TCCACCCTTTTCAAATGAATCATCTGCATCTTATTAACGTGCAAAACATC
GATGCAAATTTCAAATCGATATCGGTAATACCATCTATGTTCTCTATATC
TACAATACCCTTGAAGAAGCAGAGTTGATGATTTTTCATCAACACCAAAA
CGTTCAAAATAAATCTTGTTAAATCTTTCCTTGTCATAATTCAAAGTAAC
ATCAGGTGTTTTGTCAATCACAATTGTGTCATTCGATTTCTTCAAAAGGT
CAAAGATATCGAGATAATAAAGTTCCACAACAATATTTTCATCTTCTGAT
GCTTTATATTGAACACTATGGACAACTTTGCCATGGTATGGAAACAAGAA
AGACCGTCTGTCGCATTCACATTCGATAGGTATTGAGATCTTCAATATCT
TCTTTCCAAT
Run BLAST on NCBI

transcript from alignment at scaffold_486:40848..60519+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068605 ID=TCONS_00068605|Name=TCONS_00068605|organism=Clytia hemisphaerica|type=transcript|length=19672bp|location=Sequence derived from alignment at scaffold_486:40848..60519+ (Clytia hemisphaerica)
TAGATCGTTTGTTTctattttattcataaaatctGGATTACATTTCAGGC GCTTCGCGCCCTTACGTAATCCTCAATTTTTCTATACCAACGGAATGTTG CTTGAAAATACTTCGCCGTACAACAGTTTATTTTTCAATTCCAAGAAACC GGAATAAAGATTCTGgaagattttgcttgattatTTCTTCCTCATTGAAC GAGGTCAAAACAGCAAGACGCGCAAAACATTTCAGAGTTAAGCCAATATT TGGGAAAACAATCTTATGAGCTTTGAACAACATCTCATCTTGGCCACCCT CCTCGTGATTGCTTACATAGAACCCAGTATAAACCAATTCCTTTAAATNT GTCTTCGTGATTGCTTACATAGAACCCAGTATAAACCAATTCCTTCAAAT TCCAATTTAATGAAAACGTCTGCATTTCATCATTTGGATTTACATTAATC TCACTTGAAATCTGTTTGCTATTCAagtcaaacagaaaaaaattcgtCGA TGAATTGTCTGGCTCGTAAAGTAGGGGAATCAAAAGACGTCCAAATTTTA ATATTGGACTACCAGGAAAATCGACTTTAGTAATTTTAAGGTTTACAGGA AGTTTGAATTCTTGACTGGATCCAATATGACCCTCTAGAAGTCTTTGCAT GCAAAAAATTCCTGATTTGCCGTAGAAAATGACAATCATTGAATCACCTT CTCCAGATTGTAATAAAGACTGATAATTATACAAACTAGAATCCCATGCC AGTATATATGAAAATACAATTTTCCCATTAAGATCaacttcaaatatttt gtaCGTTTTAGCAGATTTTGCAGAAAAAtacagcctttgttttgaatata aGATCTTCATTGGATGGTAAATACCGGAAGAAGAAATCTCCAAATCGCAT TCCACCCTTTTCAAATGAATCATCTGCATCTTATTAACGTGCAAAACATC GATGCAAATTTCAAATCGATATCGGTAATACCATCTATGTTCTCTATATC TACAATACCCTTGAAGAAGCAGAGTTGATGATTTTTCATCAACACCAAAA CGTTCAAAATAAATCTTGTTAAATCTTTCCTTGTCATAATTCAAAGTAAC ATCAGGTGTTTTGTCAATCACAATTGTGTCATTCGATTTCTTCAAAAGGT CAAAGATATCGAGATAATAAAGTTCCACAACAATATTGTCATCTTCTGAT GCTTTATATTGAACAGTATGGACAACTTTGCCATGGTATGGAAACAAGAA AGACCATCTCTCACATTCACATTCGATAAGTATTGAGATCTTCAATATCT TCTTTCCAATCGATTCAGTTACTGCATCAAAATCGATAACAACAATAGCC ATATCATATTCTTCATAATCATCCATTGCAATAATGTAATATTTACCAGA ACCATCAAAACCTTGGTCGTAAATATCTCTGTAGAAGTCTACGCCAAGTG AGATTGATAATTCATCTTTGCCAAGAATATTTGGAGGTACAAACATTGAT TTTGCAATATtggtcatttttttatttttcaatttgttaTTATTAATCTG AAAAATGAGAAGTAAAGTTTGAAATCAAATTATCTATAAGCTTTAAGAAG CGAGCCTTACTACTTTACGAGCCCGGCATAATTTCAGGTAATTTGGCGAA AATTATTTCAGAATAAAATGTGAAAAGCTAAtttgtcaaatttaattttc gcaAAATAATACTTCTTGAAATTTACCAAATAGAATATACCATTCCCATA TTGGTCTTTATTGCGACTAGTGCTTAGTAAGAAATCTGGATAATCAAGTC CTCTTAAATGGTTTGCTCGACAATCAATGAAATTAACNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNcccccccggcaattaggtcccccgtttattaaaatttcgaa aattcgaattcgaaaacccccccccctgtttattcggcacctaagagtac cacctctacggtggagatggcgaaACTGTTAAAAGGTGAAGGAGGgcgtc ttaataagagcggggggatggatttttttctctaaacaattagcgggggg ggggacaTCTATTCGAGAGACAGGAGTAACCGGCCAAAGGGTTAGAAACT AAGAAGAGCAACTGGTATTTCAAACCATGAAAACTTTTCGATATAAAAAT TCAAACTATACACAACACAACAAACAGACAAGTGTTAAAAAAAGAGCATG CAAATTACATTATAGCCTAAATGAACCAAATTcaaagttcccgccaaatt aaatacgggttaaaggttaatttttcaagccatccacaaaatcaaattcc catctgaaaaaaaactttttcgaccaCCCGCATAGTTAAATTTCCGCTAA AATTTATCCCTTAAGGTATTCGTCTCAGATCAGAAACCATTGTTGGCCAC TTCTTAGCTTTCTCAATGTGAATTGAGTAATCTTTAAGGCACTCCTTCAA AGAATTTCATCACAAACTGGGCTAGAAGATAAGTAAAAATCcaaacttta attttttggacAATACCTTAATTGGATagattttggcggggattaaagtT GGCAAATTTAACGAATTTTGTTAAAACAacaccaaattaaatccctgccg aaatttcaaaaacgatcattcgccaaattaaatccctgcaaaatttgatg aaattttttaagataGAAGTTCTATGGAGAATAATGCATTTTTAGCAAAA TGCCATGTATTTCTTAGTTTACCAGAGACTAAAACCTtctcattcgccaa attaagtccccgttaaaatttacaaaattgattattCGCCAagttaaatc cccgccaaaaatttAATTCTTGCCAATCGCCGATTTATATTCACgtcaaa attaatccacttaaggtattttcGAAAGTTTCTTTATTTAAAGTGATCAA AATATCAAATGGTCTATCTTAGAAAACaagataaaaatggaaaaatggaa aaaaagtggCAGTCCACGATAAACATATTATTTATCAGATATGATCAATG GTAATTTTTAACAAAGACCACTCTGGTGAGGCACTTACATAAAAACTTGT ATAAAAACATTTTCAAAAGGTCTAGCATCAAAAGATAGATTCAAAAGAAA CACAACAGAAATAAAAAAATAGGTGGAACAATAAAAGCGATCAAATTCTC ACTTTTCAATTCCTAAATATCCAAAAAGAGTTGATGGTAGATTGAGCTTT AGTAATTCGTTACTGCTAAATAATTGAAGTACTACCACTCGTGCCAAATG TTTCAGAGTGattttttgaattgaatattCATTCATATTTACATGAgcga ttttgaaaaacatattcTGCCTCTCCATCGTCATCTCGTCAAAATAAGTG ATCCCAACTTCGTGCAGATTCCAAtttaaataaaccagccgaggctggaa ggtcagccaatagagcttagctagatcgctttaataagtgggttaacaga tgtaagagatgcactgaaacagagtagaNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNatgaaaatcatgtgtttgatttgccga gttaaaaaaataaatgacagaaattgaagcttgcaacagatttacactgg aaatactttggtactaCACTGACTTGTCACATCtgactatcgcttgagcc gccatcttgaaactacattatgatctgtaaaaacaacacacgctaaaagt acccaaaaaattaacccgatcggaagaaagtttagaaataaaagtgagat cggaaaatcggattttttttttgtcgtcttatggaactgaattttaccta tttgaatgctcagcttaggctgaccaaaaatAATTCGGTAAAGGCAATCC TCTAAAAATCCCATACCCTCTTAATTTCTCTCCATTGCAAATTTGAATCC AAGAGACAAGTTGTCTGCCTTTATTAAAGTCAGAAGCATTGGCAACCAAA AGGAAATCAACAAACCTTTTGATCGAATATTGAAACGAAAACGACTTCGC ATCTGATGTTTCGTAATCAATTATTTCATCCGTAAACTCTTGAACAATAC ATGTCCTATCTTGATTCAATTCCCAAACTCGTATAGCATTATCCTTATGA GTAATTCCTTTGTGTGATAAAACAAGATAACGGTCGTCAAAATGATAATC ATGGTATCCATCATCTATTGCAATCGAATAAACATAACGAAAATTGCCAG TGTAGTCATATTCGTCAATTCTTAAGACACCTTctcttttgaaataaaaa tagattctctcttttgttgcattgagaaaaaagaaaaaatggtcaaaaac tgAAGATTGACTGAGATCGATGACAACTCTCTTTGAATGACAGATTTCAG TTTGCTGCGTCTTTATAACATCCAAACAACATTCACGGAGACGAGTTGCT TCTCTTTCCTcattatattctttgaaaaaggTTAACACCAAAAGTGCAGT TACGTCATTTCCTCTTAATCCATACCAATTTTGACATCTTTCGTAGTCTT TACCATCGAATCTTAAAACAATATCTGCTTCACTTGGCTCGATAGTTAAA TCCAATACCTTATACGGATGATCAACAAAAACATCAGGGAGATAATAATG ATAAATATCTACTGAAAATTTCTCTACATTATCATTATCGAGTATATCAT GCTTCACAATGACAACAACATTCCCAGTATACGCATCAAGTTCCTGCCAG GCCGATTCCGAACCATCCATATCTTGGAAATCAATGGTTAGAGTTCTCTT CTCGAGAGCATTTTGTTGTTCATTGAAATACACCATAAATACACGAAGAC GATCTCCACCATCCATATCTTCGAGAATGTAAAAGTGTTTGCCAGTGTGG TCAAATACCCTTTGAAAGGAATTGATAGCTTGAAAAGCATTACCCAAGGA AATGctcaattctttatttttgtattctGTAGCTGCTGCTGGTGGCAGAA ACATTGATTTTCTTACGTTGTTCATTGTTAATATTATTCTTCACCCACAA TCTAAACTATGGTAGAAGAAACTTTATGTAATTGCAAACAATGAAAGACA GAGTAATAGTAAATTGAAATTAATTAGGTAAAATTGTATAACTAAACGTG GTCCAGATTTCAAAAGTGACTAATCTCCCTGTTTAGTTTGTTTAGACATt ttgaaaacctttaaaaataagtttaaaTTATAGAATAAAATCTCCATCAT GAatttgagggtgttcccatTATCTTGGAGGTGGCGATTTTCGTTCGATG ATTCCTAACATGTTCCTGGACCTCTctacaaaattatatttttacacCAT TTTTTTCGAGGTTCTGATGGGTTTTGATATCCTAATTCTACCTGATTAAT TACCAGAAGTTTCATTTTGTTTATCAAAGTATGTTGAAGATATAATAATT AACGTTCTCAGATGTCGTAAAGAAAATACTATATAAGGAAGAGTTTTcta agagaaaaaatgacaaaacaaaaattataaaatgtatGAACGTTCAACGT TCCTTAAAATTATAGATAAATTTCGAGAAAAGATTGagaaaaataaaagc aaaatgtaCAAGAAAAAGCAAGTTTATACcatattctaaaaaaaatacct taaaagtTTGATGTTAAAATATCTATATTTTGTGTACAGGAGGGGATGTA CCAGATTTCGGAATTGAAAAATTCAGCCGCTgttatttcaataatttttc gtCCTAAATCTTTTCAGTAGTTTGGAATCCTGATATCATTTGGTTTATCG AAAAAAAGACCTCTTTTCACACTGAAATCTCTGTAATAAGATAGCTTCAC TCTAAAATTTCggaattttggcaaaatggctcaaaaactaaagaaaaatc gATCAtgaaaccaaaatatttttaccctgAACAAGATTAAAGGATTGAAG TTCTGACCATTAGTCCAGTTATAATCTATATTTTCTGTAAGTAAATCATG TTTAAANTCCTGAACAAGATTAAAGGATTGAAGTTAGTCCAGTTATAATC TATATTTTCTGTAAGTAAATCATGTTTAAAGATAAAAAGCTATAAGAAAT ATAAGAATTGATTATGAACAACTTTTATAAacccaaaaacttcaaaaggt ttaATATCTAAACTAAAAACAGAAATAGAAATAAacttatctttccaaca agatATAAAATTCATATTGCAAACAAACTATACATAATCTGGGTATATAT AAAatgatttataaaaacaataagaTTCATTAAAAATCATCTACGAAAGT TCAGTTAATTTTCAGTTGTTGAAGATACTGAACTTTCATAGAtgattttt aatgaattttattgtttttataaattattATATACATACCCAGATTATGT ATAGTTTGCAATAtgaattttaaaactaaaataaaatttacctAAATAAT CACTATAGAACTAAATTTAGATTGAAAANCAATTCAATAcaattcaattt tatttgacgtcaaatacagTCGCATCGCGAGAGCAGCAAAAAATGTGCAC AATATGGCCGAAATAACTGGAAAAATATACGAACGAAAATCCGAGGAAAT TGGTTCTTGTACCCCATCAAGCTGTCTCATCCATGCAAACACAAATAAAA AGGACACTTTACAATGCAAGAAATGCGAACGTCGAGTTCATTTGGCTTGC TCTGAGCTTCCTCCTTATCAAATCCAGCTTTATCTTCAACAGTCTTCAAC ACAAATATAGAAGCTATCAATGCATGAGCTGTGTGATCATAACACcagaa ttgaaaaagaaattgaacttcAAGTCTGttggagatttaaaaaaagatat cgATGCATGTGAGAACATAATAAAAGCACAACGGGAggacatttcaaatt tgaaggCTAAAGTGTCAACTAACAATGTGAATAAAGCAGTCACAGAANNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAATAT TTGGGAAAACAATCTTATGAGCTTTGAACAACATCTCATCTTGGCCACCC TCCTCGTGATTGCTTACATAGAACCCAGTATAAACCAATTCCTTTAAATT CCAATTTAATGAAAACGTCTGCATTTCATCATTTGGATTTAAATTAATGT CACTTGAAATCTCTTTGCTATTCAAGTCAAACAGAAAAAATTTCGTCGAT GAATTGTCTGGCTCGTAAAGTAAGGGAATCAAAAGACGTCCAAATTTCAA TGTTGGAGGACCAGGAAAATTGACTTTAGTAATTTTAAGGTTTACAGGAA GTTTGAATTCTTGACTCGATCCAATATGACCCTCTAGAAGTCTTTGCATG CAAAAGATTCCTGATATACCGTAGAAAATGACAATCATTGAATCACCTTC TCCAGATTGCAATAAAGAATGATGATTATACAAACTAGAATCCCATGGCA GTatgtatgaaaataaaatcttccCATTAAGATCAACTTCGAAGATTTCG TACgttttaatagattttttagaaaaatacagCCTTTGTTTGGAATACAA GATCTTCATTGGATGGTACATATCGGAAGAAAAAATCTCCAAATTGCATT CCACCCTTTTCAAATGAATCATTTGCATCTTACTAACGTGTAAAACATCG ATGCAAATTTCAGGTCGATATCGATAATACCATCTATCTTCTCTATATCT ACGATACCCTTGGACAAGCagagttgatgattttttatcAACACCACAAC GTTCAAAATAAATCATATTCAGAGATCCCActggcatttttgaaaaaaca tgcatgaaaaaatgccaaaaagagcagaaaaaaatgctaaataatgctaa ttttaaatggaaaaacatgaaaaacatgccAAAAAGTAGAGTTATTAATC AACGAAGTTCCCGTGTTTCCCGTACCTAAAAACAGTGATGTAGACATGAT GAGAAATCGATATATAATCTAATAAATATCACAAACACAAGTAGAAATCA TTTCACTTGGAATTTATTAATCAATCGAAGGCTGCAATTTAAAATgtagc ccaccatggttggacAATAGGAAAGTTTATGATTTTCAAGATgcaaaaaa agtgtcttttcaagggTGGAAAACTAAATAGAAAATAACGGATTGAAATG TAGGAACAGTATAACTAAGAATCAGAAAAATGTGCATAAGGCAAATTTTA GCTTAGGTAGCCCTGTTCCTGAAAAAAAACCAAGTTTGGTCCCAAaggag aaatatttaaaaatcatgTATATCCAGACACTAGAATACAAGCTATAATG CAAgagacatttaaaaaattggtgCTTTAAAAAAACCCTGTGTTTTGCCG AGGTCATGGACCTGTCTAAGCCCTGGAAGAATAATGAGGTGGTTCACTGA CATGTAGTCTTGACAAAACTTCCAAATATTGGCTACTTGTTTTATAAAGT AGAGCTTGAACGGAGAAaaacatagtgtgcagagggatCTAAACCCCcta tttttatttcatcccccgtATATGTGTATcccctatttaaaaaaaatttc gaacccgTGTTATTGACAGTAGCAGTCCAACAGTCATTCCAaaccgaaaa aattgaaatttgtatcaaaaattatatgaaaaaaagaGTTTAACATGGTG CCGCAGGCAAAGACTTAGCTATCTACACTTGTTTTTTAGTTGCCCCAtac caaatatctaaatcaatataaatatgatagatattttgaccaaaagttGT TACCCCCCCTAATTTTTCCTTGACCcccccctaaaatcttaaaccCCCCA TTTTTTTCGGGAAATCTCCTACCTCCCTATAAAGCATCAGAAAAGATGGA TCCCCCTACCTGACACATCCTTGTTTTAACATTTCTGTCAATGGTATTTA TTGAAAACTTaagataatattttatgttgcccaccatggttgggcaagtg agaaaattttagaattttgggGGGCTGAAAGTGCTATTTTGAGCTATCTT TAACGAATCTGAATATCAGGACAGAGAATAgacaatataaacaaaattcC CTAATGTTTCTCTGAAAAACATGCCAAAATGGTCCAAAACATGctaaaaa ccatgaaaaatgccaaatttgcaaaaatcatgaaaatcatgaaaaacatg cCGAGTGGGGTCTCTGCATATTGTTTTTAAATCGGTCCTTGTCATAATTC AAAGTAATATCAGGTGTTTTGTCAATCACAATTACGACATCATTCGATCT TTTCAAAAGGTCAAAGATATCGAGATAATAAAGGTCCACAGCAATATTTT CATCTTCTGATGCTTTATAGTGAACAGTATGGACAACTTTTCCATGGTAT GGAAACATGAAAGACCGTCTGCCGCATTCGCATTCGATAGGTATTGAGAT CCTCAATATCTTCTTTCCAATCGATTCAGTTACTGCATCAAAATCGATAA CAAAAATAGCCATATCAAATTCTCCATACTCATCCATTGCAATAATGTAA TATTTACCAGTACCATCAAAACCTTGGTCGTAAATATCTCTGTAGAAATC TACGCCCAGTGAGATTGATGATTCATCTTTGCCAAGAATATTTGGAGGTA CAAACATTGATTTTGCAATATtggtcattttttttatttttcaatttctt atgTAATCTGAAAAATGAGAAGTAAAGTTTGAAATCCAATTATCTATAAG CTTTAAGAAGCACTTACTACTCTACGAGTCTCGCATAATTTCAGGTAATT TGGCGAAAATAAATGATTTGCTCGACAATCAATGAAATTAacgtactctt gtctcccgaatagacgaggggggggggtccgaaaatAAATAGGGgttagg aaaattttctaaattctaataagcggggggggggaatttgaaagtagaat tttttttaactgatatcaatttgaacaataaaaaagaaacttatATTATT AAatacgtaaaataagaaccaatactaacaaaaaggaaatttttaacaag tttaaggtctatttacgccaaattaaatccctgcaAAGTTTAACGAAATT TTTCAAGATAGAAATTCTATGGAGAATAATGCAtttttagtaaaataaca tGTATTTCTTAGTTTACCAGAGACTAAAACCTtcccattcgccaaattaa gtcCCCGCTAAAATTTACAAAGTTGATTATTCGCCAagttaaatccccgc caaaaatttAATTATTCCCAATCGCCAAATTATATCCACgtcaaaattaa tccacttaaggtattttcGAAAGTTTCTTTATTTAAAGTGATCAAAATAC CAAATGGTCTATCTTAGAAAACaagataaaaatggaaaaatggaaaaaaa gtggCAGTCCACGATAAACATATTATTTATCAGATATGATCAATGGTAAT TTTTAACAAAGACCACTCTGGTGAGGCACTTACATAAAAACTTGTATAAA AACATTTNAGATATGATCAATGGTAATTTTTAACAAAGACCACTCTGGTG AGGCACTTACATAAAAACTTGtataaaatcattttcaaaaggtCTAGCAT CAAAAGATAGattcaaaagaaacaaaacaaaaataaaaaaacaggtGAAA TAATAAAAGCGATCAAATTCTCACTTTTCAATTCCTAAATATCCAAAAAG AGTTGATGGTAGATTGAGCTTTAGTAATTCGTTACTGCTAAATAATTGAA GTATTACCACTCGTGCCAAATGTTTCAGAGTGattttttgaattgaatat tCATTCATATTTACATGACcgattttgaaaacattttctgccTCTCCATC GTCATCTCGTCAAAATAAGTGATCCCAACTTCGTGCAGAttccaatttaa aaaataattcggTAAAGGCAATCCTCTAAAAATCCCATACCCTCTTAATT TCTCTCCATTGCAAATTTGAATCCAAGAGACAAGTTGTCTGCCTTTATTA AAGTCAGAAGCATTGGCNCAATCCTCTAAAAACCCCATACCCTCTTAATT TCTCTCCATTGCAAATTTGAATCCAAGAGACAAGTTGTCTGCCTTTATTA AAGTCAGAAGCATTGGCAACCAAAAGGAAATCAACAAACCTTTTGATCCA GGGCCCGCGccacgattttgaaagtgagggggccaacaaaatatagtgac taaggaggcgcaaccatggtttgcgccgacgggccggaaaattgtttgtt taaaacaaaatagtatAATTAGACTTATTTAAGTGTCCATCTGTCCCGTC TTAGAAAGGTTCTAACGTTTTTATTTGGCACGtgcacagaaaagaaaaaa ataattaggtgaagagaaactttttattttgctttgcaaaaaagtggagg ggccatggccccccggcccccccggTGGCGCGGGCCCTGTTGATCGAATA TTGAAACGAAAACAAATTCGCATCTGATGTTTCGTAATCAATTATTTCAT CATTAAACTCTTGAACAATACATGTCCTATCTTGATTCAATTCCCAAACT CGTATAGCATTATTCTTGTGAGTAATTCCTTTGTGTGATAAAACTATATA ACGGTCGTCAAAATGATAATCATGGTATCCATCATCTATTGCAATCGAAT AAACATATCGAAAATTGCCAGTGTAATCATATTCGTCAATTCTTCTGTct cttttgaaataaaaatagattctctcttttgttgcattgagaaaaaagaa aaaatcatcaaaaactgAAGATTGACTGAGATCGATAGCAACTCTCTTTG AATGACAGATTTCAGTTTGCTGTGTCTTTATGACATCCAAACAACATTCA CGGAGACGAGTTGCTTCTCCTTCCTCgttatattctttgaaaaaggTTAA CACCAAAAGTGCAGTTACGCCATTTTCTCTTAATCCATACCAAATTTGAC ATCTTTCGTAGTCTTTACCATCGAATCTTAAAACAATATCTGCTTCACTT GGCTCGATAGTTAAATCCAATACCTTATACGGATGATCAACAAAAACATC AGGAAGATAATAATGATAAACatttattaaaaatttctctgcatTATCAT TATCGAGTATATCATGTTTCACAATGACAACAACATTGCCAGTATACGGA TCAAGTTCTTGCCAGACCGATTCCCAACCATCCATATCTTGGAAATCAAT GGTTAGAGTTCTCTTCTCGAGAGCATTATGTTCTTCATTGAAGTACACCA TAAATACACGAAGACGATCGCCACCATCCATATCTTCGAGAATGTAAAAG TGTTTACCAGTGTGGTCAAATCCCCTTTGAAAGGAATTGATAGCTTGAAA ATCATTACCCAAGGAAATGctcaattctttatttttgtattctGTAGTTG CAGCTGGTGACAGAAACATTGATTTTCTTACGTCGTTCATTTTTAATATT ATTCTTCACCCACAATCTGAATTATAGTAGAAGAAACTTCGTGTAGTTGC AAACAATGAAAGACAGAGTAATAGTAAATTGAAATTAATTAGGTAAAATT GTATAACTAAACGTGGTCCAGATTTCAAAAGTGACTAATCTCCCTGTTTA GTTTGTTTAGACATtttgaaaacctttaaaaataagtttaaaTTATAGAA TAAAATCTCCATCATGAATTTGAGGGTGNTGTTagttttgacatttgaaa acctttaaaaataagtttaaattataccgggtgtgccacaaaaaagtttc tctctttgaaactaattttctcgaaatctaaaaattttataagaaccatt cctatttcattggaaagaagaaagataaacttaaattttgttgggtcatt tattaaattcgattcattagaacAAAAGTTATACtcgattgaatgaaaaa gttactttcagaaagtgctcgaaatcgttaaaaatcgacctatcaaattt ttgattaagagcattttttagtaagtaaacacataaattttgaaactgaa gggttgaaagggtttaaaatcttcatcaaaatcactttaatttactttta ccgaaattttcctcagatttttggttctagactggataaagtctatgtaa gactggatctacctcgaaatcCGTATTTGATGtacttttatgaattttac cagattttttggtctttttcgacgaatttttcttcatttcattgaaattc aaccttccttcatacaaaaaaggtcatttagaaagctaattatcattttt aatgactgaaacgaaaatactgatgtatcatgtaattatgcttctgtttg atttgataggtcgatttttaatgTTATTCAGCACTTTCTTAAAAGtaact tttctattcaattgagcataacttttgatctaatgaatcaaatttaataa atgaccaatcaaaatttaagtctatctttcttcttgcCAATAAAATAGGA acggttcttttaaaatttttagatttcgagaaaattagtttcaaagagag aacttttttgtggcacacccggtagaaAAAATCTCCATCATGAAATTCGT TCGATGATTCCTAACATGTTCCTGGACCTCTctacaaaattatattttta cacCATTTTTTTCGAGGTTCTGATGGGTTTTGATATCCTAATTCTACCTG ATTAATTACCAGAAGTTTCATTTTGTTTATCAAAGTATGTTGAAGATAAT AATTAACGTTCTCAGATTTCGTAAAGAAAATACTATATAAGGAAGAGTTT TctaagagaaaaaatgacaaaacaaaaattataaaatgtatGAACGTTCA ACGTTCTTTAAAATTATAGATAAATTTCGAGAAAAGATCGagaaaaataa aagcaaaatgtaCAAGAAAAAGCAAGTTTATACCATATTCTAAAAAAATG ATCTTAAAAGTTTGATGTTAAAATATCTATATTTTGTGTACAGGAGGGGA TGTACCAGATTTCGGAATTGAAAAATTCAGCCGCTTTTATTTCGATAATT TTTCGTCCTAAATCTTTTCAGTAGTTTGGAATCCTGATATCATTTGGTTT ATCGAAAAAAGACCTCTTTTCACACTGAAATCTCTGTAATAAGATAGCTT CACTCTAAAATTTCggaattttggcaaaatggctcaaaaactaaagaaaa atcgATCAtgaaaccaaaatatttttaccctgAACAAGATTAAAGGATTG AAGTTCTGACCATTAGTCCAGTTATAATCTATATTTTCTGTAAGTAAATC ATGTTTAAAGATAAAAAGCTATAAGAAATATAAGAATTGATTATGAACAA CTTTTATAAacccaaaaacttcaaaaggtttaATATCTAAACTAAAAACA GAAATAGAAATAAACTTATNCAAAGATAAAAAGctataaaaaatataaga attgATTAGGAACAACTTTTATAAacccaaaaacttcaaaaggtttaATA TCTAAACTAAAAACAGAAATATAAATAAACTTATCTTTCCAACAGGATAT AAAATTCATATTGCAAACAAACTATACATAATCTGGGTATATATAAAATG ATTTATAAAAACATTAAGATTCATTAAAAATCATCTACGAAAGTTCAGTT AATTTTCAGTTGTTGAAGATACTAAACTTTCATAGAtgatttttaatgaa ttttattgtttttataaattattttatataTACCCAGATTATGTATAGTT TACAATAtgaattttaaaactaaaataaaattaaccTAAATAATCACTAT AGAACTAAATttggattgaaaaaaaattaagtaaacattcaaaatagATC AGTgcatcaaaagaaaatcaaaattaaaattataaacaaataaatttgAT CAACTAATTATTGAAAAGTAAAGATAAAAATGTTAGGTATACAATTTTTA TCAGGCCAAACCTTTTTTTGCTCACCTTGTAGTATACAAGAAACTTTAgc tgatcatttaaaaaagttatccTTGATCGACTTTGGTAACTTCATTTGTA CCAAATCATTGATGGAATAATTTAACAATACAACTTTAAGTGCTGAATGA AACAGTGGCTCCACAAACCTtgttttcaatttgaaaactttCCCAAACAA TTTATTGTCAACGTCGCTATAAAACACCACTACTacttcatttgaaaaaa tactacaccGTACAACAGTTTATTTTTCAATTCCAAGAAACCGGAATAAA GATTCTGGAAGATTTTGATTGATTATTTCTTCCTCATTGAACGAGGTCAA AACAGCAAGACGCGCAAAACATTTCAGAGTTAAGCCAATATTTGGGAAAA CAATCTTATGAGCTTTGAACAACATCTCATCTTGGCCACCCTCCTCGTGA TTGCTTACATAGAACCCAGTATAAACCAATTCCTTTNTAAACATTTCAGA GTTAAGCCAATATTTGGGATAACAATCTTATGAGCTTTAAACAACATCTC ATCTTGGCCACCCTCCTCGTGATTGCTTACATAGAACCCAGTATAAACCA ATTCCTTTAAATTCCAATTTAATGAAAACGTCTGCATTTCATCATTTGGA TTTACATTAATGTCACTTGAAATCTCTTTGCTATTCAAGTCAAACAGAAA AAATTTCGTCGATGAATTGTCTGGCTCGTAAAGTAAGGAAATCAAAAGAT GTCCAAATTTTAATATTGGACAACCAGGAAAATTAACCTTAGTAATTTTA AGGTTTACAGGAAGTTTGAATTCTTGACTGGATCCAATATGACCCTCTAG AAGTCTTTGCATGCAAAAGATTCCTGATATACCGTAGAAAATGACAATCA TTGAATCACCTTCTCCAGATTGCAATAAAGACTGATAATTGAACAAATCA GAATCCCATGACAGTATGTATGAAAATACAATTTTCCCATTAAGATCAAC TTCAAAGATTTCGTACGTTTTAACAGATTTTGCAGAAAAATACAGCCTTT GTTTGGAATATAAGATCTTCATTGGATGGTAAATACCGGAAGAAAAAATC TCCAAATCGCATTCCACCCTTTTCAAATGAACCATATGCATCTTACTAAC GTGCAAAACATCGATGCAAATCTCAGGTCGATATCGATAATACCATCTAT CTTCTCTATATCTACAATACCCTTGAAGAAGCagagttgatgatttttta tcAACACCACAACGTTCAAAATAAATCTTGTTAAATCGTTCCTTGTCATA ATTCAAAGTAATATCAGGGGTTTTGTCAATCACAATTGTGTCATTCGATT TTTTCAAAAGGTCAAAGATATCAAGATAATAAAGGTCCACAGCAACATTT TCATCTTCTGATGCTTTATATTGAACACTATGGACAACTTTGCCATGGTA TGGAAACAAGAAAGACCGTCTGTCGCATTCACATTCGATAGGTATTGAGA TCTTCAATATCTTCTTTCCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042791XLOC_042791Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068605-exon-scaffold_486-1491911889:40848..42031TCONS_00068605-exon-scaffold_486-1491911889:40848..42031Clytia hemisphaericaexon
TCONS_00068605-exon-scaffold_486-1510915933:40848..42031TCONS_00068605-exon-scaffold_486-1510915933:40848..42031Clytia hemisphaericaexon
TCONS_00068605-exon-scaffold_486-1575043694:40848..42031TCONS_00068605-exon-scaffold_486-1575043694:40848..42031Clytia hemisphaericaexon
TCONS_00068605-exon-scaffold_486-1491911889:60394..60519TCONS_00068605-exon-scaffold_486-1491911889:60394..60519Clytia hemisphaericaexon
TCONS_00068605-exon-scaffold_486-1510915933:60394..60519TCONS_00068605-exon-scaffold_486-1510915933:60394..60519Clytia hemisphaericaexon
TCONS_00068605-exon-scaffold_486-1575043694:60394..60519TCONS_00068605-exon-scaffold_486-1575043694:60394..60519Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:40848..60519 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.385642 0.343074 1.09095 0 0 0 0 0 0 0.243771 0 0 0 0 0 0 0 0 0 0 0.348248 0 0.000550757 0 0 0 0.0130828 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068605 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top