TCONS_00068650 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068650
Unique NameTCONS_00068650
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068650 ID=TCONS_00068650|Name=TCONS_00068650|organism=Clytia hemisphaerica|type=transcript|length=255bp
GAATTGACGAATATGATTACACTGGCAATTTTCGATATGTTTATTCGATT
GCAATAGATGATGGATACCATGATTATCATTTTGACGACCGTTATATAGT
TTTATCACACAAAGGAATTACTCACAAGAATAATGCTATACGAGTTTGGG
AATTGAATCAAGATAGGACATGTATTGTTCAAGAGTTTAATGATGAAATA
ATTGATTACGAAACATCAGATGCGAATTTGTTTTCGTTTCAATATTCGAT
CAACA
Run BLAST on NCBI

transcript from alignment at scaffold_486:55535..55789

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068650 ID=TCONS_00068650|Name=TCONS_00068650|organism=Clytia hemisphaerica|type=transcript|length=255bp|location=Sequence derived from alignment at scaffold_486:55535..55789 (Clytia hemisphaerica)
TGTTGATCGAATATTGAAACGAAAACAAATTCGCATCTGATGTTTCGTAA
TCAATTATTTCATCATTAAACTCTTGAACAATACATGTCCTATCTTGATT
CAATTCCCAAACTCGTATAGCATTATTCTTGTGAGTAATTCCTTTGTGTG
ATAAAACTATATAACGGTCGTCAAAATGATAATCATGGTATCCATCATCT
ATTGCAATCGAATAAACATATCGAAAATTGCCAGTGTAATCATATTCGTC
AATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042822XLOC_042822Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068650-exon-scaffold_486-1491911889:55535..55789TCONS_00068650-exon-scaffold_486-1491911889:55535..55789Clytia hemisphaericaexon
TCONS_00068650-exon-scaffold_486-1510915933:55535..55789TCONS_00068650-exon-scaffold_486-1510915933:55535..55789Clytia hemisphaericaexon
TCONS_00068650-exon-scaffold_486-1575043694:55535..55789TCONS_00068650-exon-scaffold_486-1575043694:55535..55789Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:55535..55789 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.85431	6.79184	0	2.15328	0	0	2.23712	0	0	0	0	0	0.76364	2.44789	0	0	1.3553	0.881994	4.06377	0	1.88773	3.00857	5.38457	1.44731	0	0	0.971953	0	2.45095	2.65028
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068650 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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