TCONS_00068741 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00068741
Unique Name	TCONS_00068741
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2443

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_49:78885..83525+
coding sequence from alignment at scaffold_49:78885..83525+

transcript sequence

>TCONS_00068741 ID=TCONS_00068741|Name=TCONS_00068741|organism=Clytia hemisphaerica|type=transcript|length=2443bp
caaagagcTTTTAATAACCATCGTTGTTAGCTttgtatgaaaataaaatc
aaacttaTTTATCGCCATGGAGATTTcaattcaataatttttttgatttg
atataAAAAGCAATTACCTTGGTATTATAACTGCAAACTGCTCTCCATCT
TATAAGATAATAGAAATGATTTTAAACGTATTTTATTGAGAGTTATTAGG
AAAGAGCTCTGCGATGGAAAGGGTAGGGTAAGCGAACCGTGAACAACGCG
GTGTCGACCTTCGAGAACAAAAATTGATCAATCCGCAATCAATTATCCAG
CTTGTGCTGGCCTTTTTGTAAAtcattaaagaaaaattgtggAGGGAATA
TTTATGTTATGTTGTTGATTTGTTAGTTTTTTGAGACAAAATGTCGGCAG
AAGCAGctaaagtttttgacatttctcAAGCAGATTTACTGAGGTTTATT
GAGCAAAAGAAACAACCGGAAACTATAAATACGGGAGTTTCGGAGCATTC
AAAGCATGTGATTTTGATCGTTTCTATCTTTTTGTTCGTATTGGCCTTGT
TAACGTGTGGCTGCACCCTTTGTTTGTGGCTGGTCTCCAAACGCAGGAAG
GATGGCGAATACACCAAGCTAAAGGACGAGCCTGAGAAAGCAAATTTAGC
CTGTGATGAAGGAGCACTAAAAGATTCCATCAAAGGCACGCCAAGTTTAC
CACAGATCTCTGAGAAACCAAAGCTAGATCAGTCATCTTTCCTCCCTGAG
CGAGACACtgtagaagaagaagaattacaaaaattacGCGTCGAAAGTTT
AGACGTCGAATCAAGTTTTTACGTTCACCGAAACCGCGTCAAAGTAAACG
TTAAACAAGTTGAACTCTCACAAGTCGACGAGAAACTTTCACAAAATGCA
TACGTCTATCTTATCATCAACCTGTTGCCAGAGAAAATGGCTTTCTTTGA
ATCTGACCTTCGACCAGTCGCTGAGTGCAACTATTTTGATCAAGCGGCCG
AATTTGACTGTGAAGCGGCCGAGATCACAACGCGCACACTAAAAGTGGCT
GTTTACGCATGTGACCGATTTTCTCAACACCGATTGGTCAACGAGTACAC
ATACAACCTTGGAGTTGAAGACGCGGTCGATCTTGAAGGCGGAGAAGATA
AACCAAGTGTTATTCCTGTCGCTTTGAATGAACTTTCACGCTCTCCAGAT
AACGAGACTGCAGTCGACAGTTCAAAAGAAGGCGAAGTGTTGTTTTCATT
GTGTTACATGCCAACCTCTGGCCGATTGACTTTTGTCGCTCTCAAGGGAC
GAAATATTTCGGATGATGAAGAAGTACCATTAGCAACCTACCTTCGTGTC
TCGCTTTTGATTCTTGGTAAGAGCATGAAGACGGTTCAAACGTCGAGCGT
TCGTCGTTCAACAGCGCCTGTATACAACGAAGCCTTTGTCTTCCATACAC
CACTCGAACGCATCAAGGAGACAGACATCGTTGTTTCGGTCATGACTTAT
GGAGACTCTGCTGGACAATCTAAAACATTAGGAAAAGTTATCGTCGGACC
TAAAGCTGAAAACAACTTAGGACGAAAACACTGGGAAGCTATGCTGACGT
CACCAAGGAAACCAGTGGCTCAATGGCATGCCTTGTCTGACGAAGCATAA
ttagtgaaaaaaaaacttttgttttaatGCTTTGGAGAATTAATAGTCGG
ATAAAATGAATTGAACGATAGAATTTCAGGAGCTtcgaaaatttatgatt
tttttatttactaacCATTTATGTTTACACACAACCACATTATGACAGTC
ATGATACGTCCAGGAaaggttttgaagaaaattggTGACATTTTCAAGTA
AATGGACAtgaaatgtaaaatatttttgtactgAAGGGAAATATAGAAAC
TTAGAACGAATTAGTGGCGACTTCATAAATATCCTCATTGATCACATCCC
CTTCTCATCCCCCACccatttttttcagccagtaacGCATTGAAACTCGA
TGGGGAGGATTGATATTCCCATATTCTCAACTTCAGTTGAGCTAGAATCT
GAGAATGTCTGTCTGTGTGTGTCTGTCTGTGTGTATGTCCCAAAACTTTG
GGGCAGCCTGGAGACTTCAAAAATTGTCGAAtttggctgaaatttggcac
acttgttccttgggtgaatatctgagggtgtttctttcatctttcaaaaa
attttgatttttggggcctggagaCGACTGGTGACGAGCAACCCCAGGta
atcacccaaggaacaagtgtaccaaatttcagccaaaacggacaaagtta
taatatttgctacctaatactaaatatttgaaatgttacaattggaCTTT
CGAgtatctgaagttgagcccagtgcagtgcgcacgttcgactatttttt
ATTGCAGGGaacaattattttattttcaagtcagtaaattcag

Run BLAST on NCBI

protein sequence of TCONS_00068741-protein

>TCONS_00068741-protein ID=TCONS_00068741-protein|Name=TCONS_00068741-protein|organism=Clytia hemisphaerica|type=polypeptide|length=419bp
MSAEAAKVFDISQADLLRFIEQKKQPETINTGVSEHSKHVILIVSIFLFV
LALLTCGCTLCLWLVSKRRKDGEYTKLKDEPEKANLACDEGALKDSIKGT
PSLPQISEKPKLDQSSFLPERDTVEEEELQKLRVESLDVESSFYVHRNRV
KVNVKQVELSQVDEKLSQNAYVYLIINLLPEKMAFFESDLRPVAECNYFD
QAAEFDCEAAEITTRTLKVAVYACDRFSQHRLVNEYTYNLGVEDAVDLEG
GEDKPSVIPVALNELSRSPDNETAVDSSKEGEVLFSLCYMPTSGRLTFVA
LKGRNISDDEEVPLATYLRVSLLILGKSMKTVQTSSVRRSTAPVYNEAFV
FHTPLERIKETDIVVSVMTYGDSAGQSKTLGKVIVGPKAENNLGRKHWEA
MLTSPRKPVAQWHALSDEA

Run BLAST on NCBI

transcript from alignment at scaffold_49:78885..83525+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00068741 ID=TCONS_00068741|Name=TCONS_00068741|organism=Clytia hemisphaerica|type=transcript|length=4641bp|location=Sequence derived from alignment at scaffold_49:78885..83525+ (Clytia hemisphaerica)
caaagagcTTTTAATAACCATCGTTGTTAGCTttgtatgaaaataaaatc
aaacttaTTTATCGCCATGGAGATTTcaattcaataatttttttgatttg
atataAAAAGCAATTACCTTGGTATTATAACTGCAAACTGCTCTCCATCT
TATAAGATAATAGAAATGATTTTAAACGTATTTTATTGAGAGTTATTAGG
AAAGAGCTCTGCGATGGAAAGGGTAGGGTAAGCGAACCGTGAACAACGCG
GTGTCGACCTTCGAGAACAAAAATTGATCAATCCGCAATCAATTATCCAG
CTTGTGCTGGCCTTTTTGTAAAtcattaaagaaaaattgtggAGGGAATA
TTTATGTTATGTTGTTGATTTGTTAGTTTTTTGAGACAAAATGTCGGCAG
AAGCAGctaaagtttttgacatttctcAAGCAGATTTACTGAGGTTTATT
GAGCAAAAGAAACAACCGGAAACTATAAATACGGGAGGTAAGCTGCTCAT
GTTTTGCGATCCCTTGTTGTGACTATCTTACCATTGCTTGCTTTTTGAAT
TCATTatatgaagaaaagaaaaagagattCCTAAAAAACTGTACAATTAA
TTTCAGACTTTAAAGTTATTTAAGCATATGATTTCCAGAATATTTAGGAG
CTTCATATATTTAGAATCAATAATCTAAAGTCTGAAATTAATTGTACAGT
TTTTTAGGGgtctctttttattttcttcataaGGGTCGAATTTCATaaca
taggcgtagcgagataccctgcaaaatttatgacgtttatgacatattca
ttatcttttgatataacaaagacaataattatagtgtcgtaaaaaccgct
ctcatccataaattttgcagagtatctcgctacgcctatgcatAATGTCC
ATGAAAAGCCAAGAAAGAGTATTTTGGTTAATGAAGGTTTATTCAGGTTT
ATTTCATTGAACATATCAACGTTTGGACgtctggacgtctatcttctttt
gtgtctttgaagcgagcttcgttgccgccagcatattggtttaaaaaatc
cgacaatattcagttacaattttatttttttgaattactTAGCtaaaaag
gattgatagagctgGACATTACTCGtaattatgataaaatttgagaataa
ttcttttgtgaatttAATTCACAGAAGaattattctcaaattttatcata
GGATCATAAGTTTGAATTATATTTGATCAACATTTAATTTTCAAcgctga
aatgcagaatttcaactgtgtatacttttgaatcacttttgtcactccaa
taattttttatgactggaAGGTATgtcaaagttgagagcctgagtcataa
gaatatcataatttgaataTCACACTCTGTAAATttattccatacttttg
agtcaaaatttaaaaatattagtcggagttttgacgttgttagcaagatA
TTCCCATGAGGTATATCGTCATGATttgttgtttcattttatgttttgaa
cgaggcggcaacgaagctagcagtgcttTCTAAAAAAGACAAAGTAGATG
GATGTCCAGTTGTTTACATGTTCATGATTTAACTAGTTTTAATCTCTGAA
GGGGGTAGTACTAGGTTTGTGAGTCACGGGTTATGTCCgagtcaaaaatc
gaaaatcgacgctttgagagaaaataattttaacattttcaaaacctttg
aaagactttgatcAAAATGTCGGGCTCAGaaattcctaaaatttggtCAA
TATTTCGAAATTCATAACTAAATTTTAAgggcattttcaaattttagcct
ATTTCTTCCTTAATTATTTCAttcatattaaatttttttagaaaatcaca
AACTTATATTTTCATGGTTTTTGTCCATTTCAGTTTCGGAGCATTCAAAG
CATGTGATTTTGATCGTTTCTATCTTTTTGTTCGTATTGGCCTTGTTAAC
GTGTGGCTGCACCCTTTGTTTGTGGCTGGTCTCCAAACGCAGGAAGGATG
GCGAATACACCAAGCTAAAGGACGAGCCTGAGAAAGCAAATTTAGCCTGT
GATGAAGGAGCACTAAAAGGTAAACCTCAACTTGCAGTTTATTGTTCAAT
AATTTTCTGTAGTCTGTTTCCCTTCAATTTTGACTGTGCGGTTTTGATGA
ACCCTTCTTCAGATTTTATTTTATCCCCTTGAAATCATACGAGAAGTTGA
GctcgaaaaaaaggaaaattctcgTTGAATGACTTTCGTCAGTATTTCTA
CtctaaaaaagacaaatttttgttttacatATCTTTGCATCAACATCTTT
CAAAATGAAAGATAACATCTCCTTCTTAACTCTTTTCTTTGTGTCTTTTT
TTATCAGATTCCATCAAAGGCACGCCAAGTTTACCACAGATCTCTGAGAA
ACCAAAGCTAGATCAGTCATCTTTCCTCCCTGAGCGAGACACtgtagaag
aagaagaattacaaaaattacGCGTCGAAAGTTTAGACGTCGAATCAAGT
TTTTACGTTCACCGAAACCGCGTCAAAGTAAACGTTAAACAAGTTGAACT
CTCACAAGTCGACGAGAAACTTTCACAAAATGCATACGTCTATCTTATCA
TCAACCTGTTGCCAGAGAAAATGGCTTTCTTTGAATCTGACCTTCGACCA
GTCGCTGAGTGCAACTATTTTGATCAAGCGGCCGAATTTGACTGTGAAGC
GGCCGAGATCACAACGCGCACACTAAAAGTGGCTGTTTACGCATGTGACC
GATTTTCTCAACACCGATTGGTCAACGAGTACACATACAACCTTGGAGTT
GAAGACGCGGTCGATCTTGAAGGCGGAGAAGATAAACCAAGTGTTATTCC
TGTCGCTTTGAATGAACTTTCACGCTCTCCAGATAACGAGGTATAAACTT
AAACTACATTTCCAGTTATTTTAGTCTATAAATTCTTATTCTCAAACACT
GTTTGGAAATCATAGAGCTAATGAAAATAATTGACTGTTTTCTTCTAGAC
TGCAGTCGACAGTTCAAAAGAAGGCGAAGTGTTGTTTTCATTGTGTTACA
TGCCAACCTCTGGCCGATTGACTTTTGTCGCTCTCAAGGGACGAAATATT
TCGGATGATGAAGAAGTACCATTAGGTAGGTTCAAAATTGACTTCCTCCT
GTTTGTGTTACACATAGGCCTTTACATAagttacgtcacgaacatcactt
ttTCGTGGCGTaacttatgaaaaggtctattgctaACACTCCAATTACAT
TGAAATTCTCAGTACATTCGAAAAAATAGAACCTAAATATCTTAACATTA
GAGTTACCCTGGCAATAATAATAATCGAAAGTAAGGCCTGCAATTctttt
atgcatctcgagaagagcgTATTTAAGCCGAAAACAGAGGATTCACATTA
GCtattattttttcattgtcATCGGGAAGGAGTAAAGAAAAGGATGTTTG
ATTGAATAAAAAGcttatgctttaattttttttgacaaagactcaacttt
taaaccttttttgtGTGTCCTTCATTTACAGCAACCTACCTTCGTGTCTC
GCTTTTGATTCTTGGTAAGAGCATGAAGACGGTTCAAACGTCGAGCGTTC
GTCGTTCAACAGCGCCTGTATACAACGAAGCCTTTGTCTTCCATACACCA
CTCGAACGCATCAAGGAGACAGACATCGTTGTTTCGGTCATGACTTATGG
AGACTCTGCTGGACAATCTAAAACATTAGGAAAAGTTATCGTCGGACCTA
AAGCTGAAAACAACTTAGGACGAAAACACTGGGAAGCTATGCTGACGTCA
CCAAGGAAACCAGTGGCTCAATGGCATGCCTTGTCTGACGAAGCATAAtt
agtgaaaaaaaaacttttgttttaatGCTTTGGAGAATTAATAGTCGGAT
AAAATGAATTGAACGATAGAATTTCAGGAGCTtcgaaaatttatgatttt
tttatttactaacCATTTATGTTTACACACAACCACATTATGACAGTCAT
GATACGTCCAGGAaaggttttgaagaaaattggTGACATTTTCAAGTAAA
TGGACAtgaaatgtaaaatatttttgtactgAAGGGAAATATAGAAACTT
AGAACGAATTAGTGGCGACTTCATAAATATCCTCATTGATCACATCCCCT
TCTCATCCCCCACccatttttttcagccagtaacGCATTGAAACTCGATG
GGGAGGATTGATATTCCCATATTCTCAACTTCAGTTGAGCTAGAATCTGA
GAATGTCTGTCTGTGTGTGTCTGTCTGTGTGTATGTCCCAAAACTTTGGG
GCAGCCTGGAGACTTCAAAAATTGTCGAAtttggctgaaatttggcacac
ttgttccttgggtgaatatctgagggtgtttctttcatctttcaaaaaat
tttgatttttggggcctggagaCGACTGGTGACGAGCAACCCCAGGtaat
cacccaaggaacaagtgtaccaaatttcagccaaaacggacaaagttata
atatttgctacctaatactaaatatttgaaatgttacaattggaCTTTCG
AgtatctgaagttgagcccagtgcagtgcgcacgttcgactattttttAT
TGCAGGGaacaattattttattttcaagtcagtaaattcag

Coding sequence (CDS) from alignment at scaffold_49:78885..83525+

>TCONS_00068741 ID=TCONS_00068741|Name=TCONS_00068741|organism=Clytia hemisphaerica|type=CDS|length=6300bp|location=Sequence derived from alignment at scaffold_49:78885..83525+ (Clytia hemisphaerica)
ATGTCGGCAGAAGCAGctaaagtttttgacatttctcAAGCAGATTTACT
GAGGTTTATTGAGCAAAAGAAACAACCGGAAACTATAAATACGGGAGTTT
CGGAGCATTCAAAGCATGTGATTTTGATCGTTTCTATCTTTTTGTTCGTA
TTGGCCTTGTTAACGTGTGGCTGCACCCTTTGTTTGTGGCTGGTCTCCAA
ACGCAGGAAGGATGGCGAATACACCAAGCTAAAGGACGAGCCTGAGAAAG
CAAATTTAGCCTGTGATGAAGGAGCACTAAAAGATTCCATCAAAGGCACG
CCAAGTTTACCACAGATCTCTGAGAAACCAAAGCTAGATCAGTCATCTTT
CCTCCCTGAGCGAGACACtgtagaagaagaagaattacaaaaattacGCG
TCGAAAGTTTAGACGTCGAATCAAGTTTTTACGTTCACCGAAACCGCGTC
AAAGTAAACGTTAAACAAGTTGAACTCTCACAAGTCGACGAGAAACTTTC
ACAAAATGCATACGTCTATCTTATCATCAACCTGTTGCCAGAGAAAATGG
CTTTCTTTGAATCTGACCTTCGACCAGTCGCTGAGTGCAACTATTTTGAT
CAAGCGGCCGAATTTGACTGTGAAGCGGCCGAGATCACAACGCGCACACT
AAAAGTGGCTGTTTACGCATGTGACCGATTTTCTCAACACCGATTGGTCA
ACGAGTACACATACAACCTTGGAGTTGAAGACGCGGTCGATCTTGAAGGC
GGAGAAGATAAACCAAGTGTTATTCCTGTCGCTTTGAATGAACTTTCACG
CTCTCCAGATAACGAGACTGCAGTCGACAGTTCAAAAGAAGGCGAAGTGT
TGTTTTCATTGTGTTACATGCCAACCTCTGGCCGATTGACTTTTGTCGCT
CTCAAGGGACGAAATATTTCGGATGATGAAGAAGTACCATTAGCAACCTA
CCTTCGTGTCTCGCTTTTGATTCTTGGTAAGAGCATGAAGACGGTTCAAA
CGTCGAGCGTTCGTCGTTCAACAGCGCCTGTATACAACGAAGCCTTTGTC
TTCCATACACCACTCGAACGCATCAAGGAGACAGACATCGTTGTTTCGGT
CATGACTTATGGAGACTCTGCTGGACAATCTAAAACATTAGGAAAAGTTA
TCGTCGGACCTAAAGCTGAAAACAACTTAGGACGAAAACACTGGGAAGCT
ATGCTGACGTCACCAAGGAAACCAGTGGCTCAATGGCATGCCTTGTCTGA
CGAAGCATAAATGTCGGCAGAAGCAGctaaagtttttgacatttctcAAG
CAGATTTACTGAGGTTTATTGAGCAAAAGAAACAACCGGAAACTATAAAT
ACGGGAGTTTCGGAGCATTCAAAGCATGTGATTTTGATCGTTTCTATCTT
TTTGTTCGTATTGGCCTTGTTAACGTGTGGCTGCACCCTTTGTTTGTGGC
TGGTCTCCAAACGCAGGAAGGATGGCGAATACACCAAGCTAAAGGACGAG
CCTGAGAAAGCAAATTTAGCCTGTGATGAAGGAGCACTAAAAGATTCCAT
CAAAGGCACGCCAAGTTTACCACAGATCTCTGAGAAACCAAAGCTAGATC
AGTCATCTTTCCTCCCTGAGCGAGACACtgtagaagaagaagaattacaa
aaattacGCGTCGAAAGTTTAGACGTCGAATCAAGTTTTTACGTTCACCG
AAACCGCGTCAAAGTAAACGTTAAACAAGTTGAACTCTCACAAGTCGACG
AGAAACTTTCACAAAATGCATACGTCTATCTTATCATCAACCTGTTGCCA
GAGAAAATGGCTTTCTTTGAATCTGACCTTCGACCAGTCGCTGAGTGCAA
CTATTTTGATCAAGCGGCCGAATTTGACTGTGAAGCGGCCGAGATCACAA
CGCGCACACTAAAAGTGGCTGTTTACGCATGTGACCGATTTTCTCAACAC
CGATTGGTCAACGAGTACACATACAACCTTGGAGTTGAAGACGCGGTCGA
TCTTGAAGGCGGAGAAGATAAACCAAGTGTTATTCCTGTCGCTTTGAATG
AACTTTCACGCTCTCCAGATAACGAGACTGCAGTCGACAGTTCAAAAGAA
GGCGAAGTGTTGTTTTCATTGTGTTACATGCCAACCTCTGGCCGATTGAC
TTTTGTCGCTCTCAAGGGACGAAATATTTCGGATGATGAAGAAGTACCAT
TAGCAACCTACCTTCGTGTCTCGCTTTTGATTCTTGGTAAGAGCATGAAG
ACGGTTCAAACGTCGAGCGTTCGTCGTTCAACAGCGCCTGTATACAACGA
AGCCTTTGTCTTCCATACACCACTCGAACGCATCAAGGAGACAGACATCG
TTGTTTCGGTCATGACTTATGGAGACTCTGCTGGACAATCTAAAACATTA
GGAAAAGTTATCGTCGGACCTAAAGCTGAAAACAACTTAGGACGAAAACA
CTGGGAAGCTATGCTGACGTCACCAAGGAAACCAGTGGCTCAATGGCATG
CCTTGTCTGACGAAGCATAAATGTCGGCAGAAGCAGctaaagtttttgac
atttctcAAGCAGATTTACTGAGGTTTATTGAGCAAAAGAAACAACCGGA
AACTATAAATACGGGAGTTTCGGAGCATTCAAAGCATGTGATTTTGATCG
TTTCTATCTTTTTGTTCGTATTGGCCTTGTTAACGTGTGGCTGCACCCTT
TGTTTGTGGCTGGTCTCCAAACGCAGGAAGGATGGCGAATACACCAAGCT
AAAGGACGAGCCTGAGAAAGCAAATTTAGCCTGTGATGAAGGAGCACTAA
AAGATTCCATCAAAGGCACGCCAAGTTTACCACAGATCTCTGAGAAACCA
AAGCTAGATCAGTCATCTTTCCTCCCTGAGCGAGACACtgtagaagaaga
agaattacaaaaattacGCGTCGAAAGTTTAGACGTCGAATCAAGTTTTT
ACGTTCACCGAAACCGCGTCAAAGTAAACGTTAAACAAGTTGAACTCTCA
CAAGTCGACGAGAAACTTTCACAAAATGCATACGTCTATCTTATCATCAA
CCTGTTGCCAGAGAAAATGGCTTTCTTTGAATCTGACCTTCGACCAGTCG
CTGAGTGCAACTATTTTGATCAAGCGGCCGAATTTGACTGTGAAGCGGCC
GAGATCACAACGCGCACACTAAAAGTGGCTGTTTACGCATGTGACCGATT
TTCTCAACACCGATTGGTCAACGAGTACACATACAACCTTGGAGTTGAAG
ACGCGGTCGATCTTGAAGGCGGAGAAGATAAACCAAGTGTTATTCCTGTC
GCTTTGAATGAACTTTCACGCTCTCCAGATAACGAGACTGCAGTCGACAG
TTCAAAAGAAGGCGAAGTGTTGTTTTCATTGTGTTACATGCCAACCTCTG
GCCGATTGACTTTTGTCGCTCTCAAGGGACGAAATATTTCGGATGATGAA
GAAGTACCATTAGCAACCTACCTTCGTGTCTCGCTTTTGATTCTTGGTAA
GAGCATGAAGACGGTTCAAACGTCGAGCGTTCGTCGTTCAACAGCGCCTG
TATACAACGAAGCCTTTGTCTTCCATACACCACTCGAACGCATCAAGGAG
ACAGACATCGTTGTTTCGGTCATGACTTATGGAGACTCTGCTGGACAATC
TAAAACATTAGGAAAAGTTATCGTCGGACCTAAAGCTGAAAACAACTTAG
GACGAAAACACTGGGAAGCTATGCTGACGTCACCAAGGAAACCAGTGGCT
CAATGGCATGCCTTGTCTGACGAAGCATAAATGTCGGCAGAAGCAGctaa
agtttttgacatttctcAAGCAGATTTACTGAGGTTTATTGAGCAAAAGA
AACAACCGGAAACTATAAATACGGGAGTTTCGGAGCATTCAAAGCATGTG
ATTTTGATCGTTTCTATCTTTTTGTTCGTATTGGCCTTGTTAACGTGTGG
CTGCACCCTTTGTTTGTGGCTGGTCTCCAAACGCAGGAAGGATGGCGAAT
ACACCAAGCTAAAGGACGAGCCTGAGAAAGCAAATTTAGCCTGTGATGAA
GGAGCACTAAAAGATTCCATCAAAGGCACGCCAAGTTTACCACAGATCTC
TGAGAAACCAAAGCTAGATCAGTCATCTTTCCTCCCTGAGCGAGACACtg
tagaagaagaagaattacaaaaattacGCGTCGAAAGTTTAGACGTCGAA
TCAAGTTTTTACGTTCACCGAAACCGCGTCAAAGTAAACGTTAAACAAGT
TGAACTCTCACAAGTCGACGAGAAACTTTCACAAAATGCATACGTCTATC
TTATCATCAACCTGTTGCCAGAGAAAATGGCTTTCTTTGAATCTGACCTT
CGACCAGTCGCTGAGTGCAACTATTTTGATCAAGCGGCCGAATTTGACTG
TGAAGCGGCCGAGATCACAACGCGCACACTAAAAGTGGCTGTTTACGCAT
GTGACCGATTTTCTCAACACCGATTGGTCAACGAGTACACATACAACCTT
GGAGTTGAAGACGCGGTCGATCTTGAAGGCGGAGAAGATAAACCAAGTGT
TATTCCTGTCGCTTTGAATGAACTTTCACGCTCTCCAGATAACGAGACTG
CAGTCGACAGTTCAAAAGAAGGCGAAGTGTTGTTTTCATTGTGTTACATG
CCAACCTCTGGCCGATTGACTTTTGTCGCTCTCAAGGGACGAAATATTTC
GGATGATGAAGAAGTACCATTAGCAACCTACCTTCGTGTCTCGCTTTTGA
TTCTTGGTAAGAGCATGAAGACGGTTCAAACGTCGAGCGTTCGTCGTTCA
ACAGCGCCTGTATACAACGAAGCCTTTGTCTTCCATACACCACTCGAACG
CATCAAGGAGACAGACATCGTTGTTTCGGTCATGACTTATGGAGACTCTG
CTGGACAATCTAAAACATTAGGAAAAGTTATCGTCGGACCTAAAGCTGAA
AACAACTTAGGACGAAAACACTGGGAAGCTATGCTGACGTCACCAAGGAA
ACCAGTGGCTCAATGGCATGCCTTGTCTGACGAAGCATAAATGTCGGCAG
AAGCAGctaaagtttttgacatttctcAAGCAGATTTACTGAGGTTTATT
GAGCAAAAGAAACAACCGGAAACTATAAATACGGGAGTTTCGGAGCATTC
AAAGCATGTGATTTTGATCGTTTCTATCTTTTTGTTCGTATTGGCCTTGT
TAACGTGTGGCTGCACCCTTTGTTTGTGGCTGGTCTCCAAACGCAGGAAG
GATGGCGAATACACCAAGCTAAAGGACGAGCCTGAGAAAGCAAATTTAGC
CTGTGATGAAGGAGCACTAAAAGATTCCATCAAAGGCACGCCAAGTTTAC
CACAGATCTCTGAGAAACCAAAGCTAGATCAGTCATCTTTCCTCCCTGAG
CGAGACACtgtagaagaagaagaattacaaaaattacGCGTCGAAAGTTT
AGACGTCGAATCAAGTTTTTACGTTCACCGAAACCGCGTCAAAGTAAACG
TTAAACAAGTTGAACTCTCACAAGTCGACGAGAAACTTTCACAAAATGCA
TACGTCTATCTTATCATCAACCTGTTGCCAGAGAAAATGGCTTTCTTTGA
ATCTGACCTTCGACCAGTCGCTGAGTGCAACTATTTTGATCAAGCGGCCG
AATTTGACTGTGAAGCGGCCGAGATCACAACGCGCACACTAAAAGTGGCT
GTTTACGCATGTGACCGATTTTCTCAACACCGATTGGTCAACGAGTACAC
ATACAACCTTGGAGTTGAAGACGCGGTCGATCTTGAAGGCGGAGAAGATA
AACCAAGTGTTATTCCTGTCGCTTTGAATGAACTTTCACGCTCTCCAGAT
AACGAGACTGCAGTCGACAGTTCAAAAGAAGGCGAAGTGTTGTTTTCATT
GTGTTACATGCCAACCTCTGGCCGATTGACTTTTGTCGCTCTCAAGGGAC
GAAATATTTCGGATGATGAAGAAGTACCATTAGCAACCTACCTTCGTGTC
TCGCTTTTGATTCTTGGTAAGAGCATGAAGACGGTTCAAACGTCGAGCGT
TCGTCGTTCAACAGCGCCTGTATACAACGAAGCCTTTGTCTTCCATACAC
CACTCGAACGCATCAAGGAGACAGACATCGTTGTTTCGGTCATGACTTAT
GGAGACTCTGCTGGACAATCTAAAACATTAGGAAAAGTTATCGTCGGACC
TAAAGCTGAAAACAACTTAGGACGAAAACACTGGGAAGCTATGCTGACGT
CACCAAGGAAACCAGTGGCTCAATGGCATGCCTTGTCTGACGAAGCATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_042877	XLOC_042877	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00068741-protein	TCONS_00068741-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_49	supercontig	scaffold_49:78885..83525 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
172.52	174.554	84.2055	66.6661	348.789	279.544	382.935	376.221	332.401	344.619	233.023	286.895	132.448	138.731	66.0518	57.465	77.5142	92.7431	87.2606	102.896	106.298	100.248	112.491	109.743	66.4672	48.1955	90.6572	116.875	34.825	43.1395

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

Blast

[Close]

BLAST of TCONS_00068741 vs. Swiss-Prot (Human)
Match: SYT9 (Synaptotagmin-9 OS=Homo sapiens GN=SYT9 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.841e-35
Identity = 89/245 (36.33%), Postives = 131/245 (53.47%), Query Frame = 1

Query:  907 YLIINLLPEKMAFFESDLRPVAECNYFDQAAEFDCEAAEITTRTLKVAVYACDRFSQHRLVNEYTYNLGVEDAVDLEGGEDKPSVIPVALNELSRSPDNETAV-DSSKEGEVLFSLCYMPTSGRLTFVALKGRNI-SDDEEVPLATYLRVSLLILGKSMKTVQTSSVRRSTAPVYNEAFVFHTPLERIKETDIVVSVMTYGDSAGQSKTLGKVIVGPKAENNLGRKHWEAMLTSPRKPVAQWHAL 1635
            Y+ I LLP++    ++ +        FD+   F     ++  R L  +VY  DRFS+H L+ +      V+  +DL    D P        E     D E    D+   GE++FSLCY+PT+GRLT   +K RN+ + D       Y++VSL+  G+ +K  +TS+ R +  PVYNEA VF  P E I +  + ++VM Y D  G ++ +G   VG +AE  LGR HW  ML+ PRKP+A WH+L
Sbjct:  259 YVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLFPVPYNDLEARKLHFSVYDFDRFSRHDLIGQVV----VDHFLDLA---DFP-------RECILWKDIEYVTNDNVDLGELMFSLCYLPTAGRLTITIIKARNLKAMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIVFDVPPENIDQIHLSIAVMDY-DRVGHNEIIGVCQVGNEAE-RLGRDHWSEMLSYPRKPIAHWHSL 487

The following BLAST results are available for this feature:

BLAST of TCONS_00068741 vs. Swiss-Prot (Human)

BLAST of TCONS_00068741 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SYT9	4.841e-35	36.33	Synaptotagmin-9 OS=Homo sapiens GN=SYT9 PE=2 SV=1	[more]

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TCONS_00068741 (transcript) - C. hemisphaerica