TCONS_00068804 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068804
Unique NameTCONS_00068804
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1478

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068804 ID=TCONS_00068804|Name=TCONS_00068804|organism=Clytia hemisphaerica|type=transcript|length=1478bp
TTTGCTTTGTTTCGATTTAGACATTAGATaatagaaaaagaagatgaaaa
aatgtCGATCAGAATCAGTGAAGAACCGCCAAAGAATAAAGAAGAATTTT
TACAATCTCGCATCGATCAACAAGTCGAACTGATCTGTATTCTGAAACAA
CGCGCGGACGAATACTTGCAGAAATATCTAACCAATGAAGAGCAAGttaa
aacattacgtaatgatttAGAGAAAACTCAAAATGAACATTCTTCTGAAG
TTGAGAAATGTAAattgttgaaaagaaatatttcggaATTAGAGGAAAGA
TGGAAAAAAGTGAAAGATCAGAATGGCGGATTGGAACAAGAAAATGTTGG
TTTACGTAACAGATGTCGAGAAttagaagaaaataatgaagaaCTCAATA
CTCAATGTGAGAAGCTAAAGGTCGAGTTGGAAGATATACCAGGCGCATGC
GCTGAAAAAATGCGGAAATTAGACGAAGATTTACAACAACAATTGAATCA
ATCTCAAGATGTAGCAAGAAAATTCCAGGAAAAGCTATCGAAGAGAgatg
aaaagctgaaaatacTTAAAGACGATCTGAAGAACCTCTCCCAAGAGTAT
AGTGcattgaaagaaaaatttgaagattcgCAAAATAAATCGAATGAAAA
TATGAAGATAAGAGAAATCTCCGAGCAAATGGTTTCGCGTCTTCAGCAAG
ATTTACAGACTACTCGCAATGATTTGGATAATGCGAAACGAGTTCTACGG
GATGAACAATCAAGAAGTTCTAAAGAAAGGGAGACGTTGAAAAAAGAATA
TTTGGCGCTTCAACAACAACTACCCTCGTACGTTTTCGAGAAAGAACGCC
AAAGCATGAAACAGGATTTGAATGCATACAAGGACCATGCCCAAAAGCTG
TTGAATCGAGAGCAAGAACTGAATGCTAAACTAAGGAGGCTGAgtccaaa
gtcatttaaaaagtgaaaaggaAATATTTCGTTTCCTATTTGGTTAATTT
TAACACAGTTTTTACAAAGATTggtttcaaaatcattttagagAGTGAGG
ACGGAGATAGTTCTATGAAATGAGGTTGATGAGAATATACTTAAGTTTTT
ATTCGTTATATATAACACAGATCTATTAGTTTTACCCAAAATATCAATCA
ATCTTCTTATGCTTGTAAATAAAAAGTTCGTATCGTAGGACATTAAATAC
TTTAAATTGTTGGTAGTGATCATAATACACCACTTCATTCCGTCAGTGGT
TGGTGCGTTCCGTACTGGGAGTTTTATCTCCTCCTTTTTACAAGGTATCT
TTTTGccttgtcttttttttttcattggaaatttttgggaattcttaaag
ggataatcagatggtttgtaatatttggcatgtgggatccttttattgtc
ctgagcaaaacttcaaatatttttgtctaactattttccaaagtcgaggt
atttaagttacaagtttttggctTTAAG
Run BLAST on NCBI

protein sequence of TCONS_00068804-protein

>TCONS_00068804-protein ID=TCONS_00068804-protein|Name=TCONS_00068804-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MSIRISEEPPKNKEEFLQSRIDQQVELICILKQRADEYLQKYLTNEEQVK
TLRNDLEKTQNEHSSEVEKCKLLKRNISELEERWKKVKDQNGGLEQENVG
LRNRCRELEENNEELNTQCEKLKVELEDIPGACAEKMRKLDEDLQQQLNQ
SQDVARKFQEKLSKRDEKLKILKDDLKNLSQEYSALKEKFEDSQNKSNEN
MKIREISEQMVSRLQQDLQTTRNDLDNAKRVLRDEQSRSSKERETLKKEY
LALQQQLPSYVFEKERQSMKQDLNAYKDHAQKLLNREQELNAKLRRLSPK
SFKK
Run BLAST on NCBI

transcript from alignment at scaffold_49:594044..599049+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068804 ID=TCONS_00068804|Name=TCONS_00068804|organism=Clytia hemisphaerica|type=transcript|length=5006bp|location=Sequence derived from alignment at scaffold_49:594044..599049+ (Clytia hemisphaerica)
TTTGCTTTGTTTCGATTTAGACATTAGATaatagaaaaagaagatgaaaa
aatgtCGATCAGAATCAGTGAAGAACCGCCAAAGAATAAAGAAGAATTTT
TACAATCTCGCATCGATCAACAAGTCGAACTGATCTGTATTCTGAAACAA
CGCGCGGACGAATACTTGCAGAAATATCTAACCAATGAAGAGCAAGttaa
aacattacgtaatgatttAGAGAAAACTCAAAATGAACATTCTTCTGAAG
TTGAGAAATGTAAattgttgaaaagaaatatttcggaATTAGAGGAAAGA
TGGAAAAAAGTGAAAGATCAGAATGGCGGATTGGAACAAGAAAATGTTGG
TTTACGTAACAGATGTCGAGAAttagaagaaaataatgaagaaCTCAATA
CTCAATGTGAGAAGCTAAAGGTATGGTTTCTATTCGTCGTATTCGTCTGA
CATAAAAACAAGCAgaattatttgaaatttataaccataaaaaatatgaa
acttAAACGTAcgacaaatttgaaattttgaataacccCGTATTTTAATA
CGTACGGTTAAAACCGTATAATGATATttagtttaaaggttttgttttta
attaagagtgatatcgtttgcttactcatttacaagcttttcacattgga
ttgacacggtaggaaagaggaaaagaaaaatattaaatataacaataggc
agacactgtcctgatatgaaaaatgtgtctgatatgacaCGGGAgcactt
atgtaaaaaaaaacctttaacatttttgaaacattaTAGTGAAACCCAGA
AACATTTTATATATAGGTCGAGTTGGAAGATATACCAGGCGCATGCGCTG
AAAAAATGCGGAAATTAGACGAAGATTTACAACAACAATTGAATCAATCT
CAAGATGTAGCAAGAAAATTCCAGTAAGATTTAACTTTTCATGATATTCA
AGACAATCTTATATGATAAAACGTCCAAAAAGGCTAGACATATGCCCCTC
CAGTTATATGACCCTtaaaatatatgtttttttagatgaacgtcgaaaaA
TTGTGAAGCCTTGgggcgttcttaatttttgtaataaagcctaaataaaa
tgtttttgtttgattatttttgtgtaattttcgAAGAAATTGCAGCCCAG
AaagccttgaaatatttttaggacgtgcttgtttttttttacctaaTGCT
CTTATATAtgttgttcttatagaaaaaaacgcGAAGGTTGAATTTTACAC
ACTGCCTCGAGAACTTTTATTTTATACTAATTTACAGGGAAAAGCTATCG
AAGAGAgatgaaaagctgaaaatacTTAAAGACGATCTGAAGAACCTCTC
CCAAGAGTATAGTGGTAATTTCAATTCATCGATTTCAAATACTGTTTGtt
agatttagattttcaaTGAGTGACTCTGAGACTCACAACGTTTTGTCCTT
CGACCCGTATAAAATAGCTACGACCAATCTGTACTGAGATTACATAAAGT
ATTATTTTTATTCCCACGCTTTAAGGAACGATGACCATGTGGTCaaaagg
cgtcagcgtctcaaaccagggatccttccaatgttccgttcagttcatag
atagccaagccggctggccgtggacgCCATGAAAAAAATCGAAGGACTGT
CTAagagtcctagattactgggctatccacgtaaaatatagaCTCTATCT
ATAAACCTAGTTTTGAAAACCCATGTAAATATACTctctattttttcatt
ttcattttgatattaTATTCATTGATACACTGTGTTCATTGTTCTTTTTT
CAgcattgaaagaaaaatttgaagattcgCAAAATAAATCGAATGAAAAT
ATGAAGATAAGAGAAATCTCCGAGCAAATGGTTTCGCGTCTTCAGCAAGA
TTTACAGGTTTGTGACGCAATCGAAACGTAATTTTTTACTTATTGTAAAA
AAGCTAAAGTTATGAAGTTTTTGAAGTCCTCAAATGAAAGCTCTCCAAAT
AGCGGAAACTCAAAGCAAAGCCTTCAGCAGGGAATTTATTAGTCTCTAGC
TAGATTGAGCTTTTCAACGTGACTTAACCCAAAGATCACGATGaattata
ttttgatattttgagtATAATCAAAGTGTTCAATATTCAGGTAatatcaa
aatccaaaactaaaaggaaaattttcatcaaatatattttgaacTCTTTG
TTTTTCAGACTACTCGCAATGATTTGGATAATGCGAAACGAGTTCTACGG
GATGAACAATCAAGAAGTTCTAAAGAAAGGGAGACGTTGAAAAAGTTTGT
AGATCTTTTATGTgctgtttcgagagttctagaaCTTCTTatacagttga
gtctctttaactcgaacctctataacttgaatgtctccttaacccGAGCA
AGTATTATGGACCCTACagccttataaactttactccataactcgaaatt
tccttgacTCCTTCAATCGCGAGAAATGCAAGAGAGATTATTATCTTTGT
TATCTTGACAGTGACCAAGTTAAATCTTTTTTGTATTCAAAATGCTGTCA
ATTAACCATTTTATTCATTGTTCAATGTTTTTCCAGAGAATATTTGGCGC
TTCAACAACAACTACCCTCGTACGTTTTCGAGAAAGAACGCCAAAGCATG
AAACAGGTAAACAatgtgttttccttcatttCTTAGTGAAAAACAAAGTA
CTACTGTAAAAGttcatcaaaatttgaagatttttcacaAATTAGACTAT
TCCACGCTTAGATGGTCATCCCATGGTCATACTTTCCGTCCTTTCCTAAA
AAAATTCCGGGGGGGGATGGTCAGCGAAATTTTATAGAAACTTTATAGGG
TGGataaaaatgaaccaaaaaGGGAAGGGCTATAATTCGGACGGGTCAGA
ATACCAAGGTCTAAATCTGCCTTCCAAAAACAAAGAGATTAAaaagggtt
ggtgtaatttaagatgcacgatctaacgatttacgattcacgatgcgcga
tccatgcataaagtatgctgattattcctaataattatcatNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTAGtataattacgcatgaattaacata
ttttatgcacggatcgcgaatcgtgcatcgtaaatcgttagatcgtgcat
cttaaattacaccaacccgatTAAAAAcgtatttctaaaaaaaatttgat
tttcctcGTATACTTTGGATTGAAATCTAACGATTCAGCAAAATTCTGAG
TTACTTTGCTTTATCATTGGTGGGTGAagtataaaaatatgaaaataatg
tacacgctttttttaaaagCACCTAATTTGAACATTATTTGTTTATTGGA
Ccaacctcggaggtcctttaaattaactgatgctcgtctgttcgttcgtc
cgttcgtctgttaccagcttttctcgggattggctcattagttttttctg
atttttgcacaGTGTTGCAAAGTGGTgattcccaaaaagtgacggagccc
gattttcggaaaaaaaaatttgccggaaaaaccgtttttttggcattttc
tcgagatttcatcatttttttgcacaaagattcGTATTAGCATTttttga
taacaatgcccaccatcaagcatgattcagttgtcaataaaactgatttt
tgcaaccgggACTTTCTATTTCATTTTTCCCTACTCTCCTTCCCTCTCcc
caatcaacaatcaatgatgaaatttactGCGTTATGctttttcgctaaac
gctatattttctgactggtTGTTTTAGTTTtctctaactttcatcatcag
gtaggtccattcagcatctagcttgttcttTATTTGTTATAGGATTTGAA
TGCATACAAGGACCATGCCCAAAAGCTGTTGAATCGAGAGCAAGAACTGA
ATGCTAAACTAAGGAGGCTGAgtccaaagtcatttaaaaagtgaaaagga
AATATTTCGTTTCCTATTTGGTTAATTTTAACACAGTTTTTACAAAGATT
ggtttcaaaatcattttagagAGTGAGGACGGAGATAGTTCTATGAAATG
AGGTTGATGAGAATATACTTAAGTTTTTATTCGTTATATATAACACAGAT
CTATTAGTTTTACCCAAAATATCAATCAATCTTCTTATGCTTGTAAATAA
AAAGTTCGTATCGTAGGACATTAAATACTTTAAATTGTTGGTAGTGATCA
TAATACACCACTTCATTCCGTCAGTGGTTGGTGCGTTCCGTACTGGGAGT
TTTATCTCCTCCTTTTTACAAGGTATCTTTTTGccttgtctttttttttt
cattggaaatttttgggaattcttaaagggataatcagatggtttgtaat
atttggcatgtgggatccttttattgtcctgagcaaaacttcaaatattt
ttgtctaactattttccaaagtcgaggtatttaagttacaagtttttggc
tTTAAG

Coding sequence (CDS) from alignment at scaffold_49:594044..599049+

>TCONS_00068804 ID=TCONS_00068804|Name=TCONS_00068804|organism=Clytia hemisphaerica|type=CDS|length=6405bp|location=Sequence derived from alignment at scaffold_49:594044..599049+ (Clytia hemisphaerica)
atgtCGATCAGAATCAGTGAAGAACCGCCAAAGAATAAAGAAGAATTTTT
ACAATCTCGCATCGATCAACAAGTCGAACTGATCTGTATTCTGAAACAAC
GCGCGGACGAATACTTGCAGAAATATCTAACCAATGAAGAGCAAGttaaa
acattacgtaatgatttAGAGAAAACTCAAAATGAACATTCTTCTGAAGT
TGAGAAATGTAAattgttgaaaagaaatatttcggaATTAGAGGAAAGAT
GGAAAAAAGTGAAAGATCAGAATGGCGGATTGGAACAAGAAAATGTTGGT
TTACGTAACAGATGTCGAGAAttagaagaaaataatgaagaaCTCAATAC
TCAATGTGAGAAGCTAAAGGTCGAGTTGGAAGATATACCAGGCGCATGCG
CTGAAAAAATGCGGAAATTAGACGAAGATTTACAACAACAATTGAATCAA
TCTCAAGATGTAGCAAGAAAATTCCAGGAAAAGCTATCGAAGAGAgatga
aaagctgaaaatacTTAAAGACGATCTGAAGAACCTCTCCCAAGAGTATA
GTGcattgaaagaaaaatttgaagattcgCAAAATAAATCGAATGAAAAT
ATGAAGATAAGAGAAATCTCCGAGCAAATGGTTTCGCGTCTTCAGCAAGA
TTTACAGACTACTCGCAATGATTTGGATAATGCGAAACGAGTTCTACGGG
ATGAACAATCAAGAAGTTCTAAAGAAAGGGAGACGTTGAAAAAAGAATAT
TTGGCGCTTCAACAACAACTACCCTCGTACGTTTTCGAGAAAGAACGCCA
AAGCATGAAACAGGATTTGAATGCATACAAGGACCATGCCCAAAAGCTGT
TGAATCGAGAGCAAGAACTGAATGCTAAACTAAGGAGGCTGAgtccaaag
tcatttaaaaagtgaatgtCGATCAGAATCAGTGAAGAACCGCCAAAGAA
TAAAGAAGAATTTTTACAATCTCGCATCGATCAACAAGTCGAACTGATCT
GTATTCTGAAACAACGCGCGGACGAATACTTGCAGAAATATCTAACCAAT
GAAGAGCAAGttaaaacattacgtaatgatttAGAGAAAACTCAAAATGA
ACATTCTTCTGAAGTTGAGAAATGTAAattgttgaaaagaaatatttcgg
aATTAGAGGAAAGATGGAAAAAAGTGAAAGATCAGAATGGCGGATTGGAA
CAAGAAAATGTTGGTTTACGTAACAGATGTCGAGAAttagaagaaaataa
tgaagaaCTCAATACTCAATGTGAGAAGCTAAAGGTCGAGTTGGAAGATA
TACCAGGCGCATGCGCTGAAAAAATGCGGAAATTAGACGAAGATTTACAA
CAACAATTGAATCAATCTCAAGATGTAGCAAGAAAATTCCAGGAAAAGCT
ATCGAAGAGAgatgaaaagctgaaaatacTTAAAGACGATCTGAAGAACC
TCTCCCAAGAGTATAGTGcattgaaagaaaaatttgaagattcgCAAAAT
AAATCGAATGAAAATATGAAGATAAGAGAAATCTCCGAGCAAATGGTTTC
GCGTCTTCAGCAAGATTTACAGACTACTCGCAATGATTTGGATAATGCGA
AACGAGTTCTACGGGATGAACAATCAAGAAGTTCTAAAGAAAGGGAGACG
TTGAAAAAAGAATATTTGGCGCTTCAACAACAACTACCCTCGTACGTTTT
CGAGAAAGAACGCCAAAGCATGAAACAGGATTTGAATGCATACAAGGACC
ATGCCCAAAAGCTGTTGAATCGAGAGCAAGAACTGAATGCTAAACTAAGG
AGGCTGAgtccaaagtcatttaaaaagtgaatgtCGATCAGAATCAGTGA
AGAACCGCCAAAGAATAAAGAAGAATTTTTACAATCTCGCATCGATCAAC
AAGTCGAACTGATCTGTATTCTGAAACAACGCGCGGACGAATACTTGCAG
AAATATCTAACCAATGAAGAGCAAGttaaaacattacgtaatgatttAGA
GAAAACTCAAAATGAACATTCTTCTGAAGTTGAGAAATGTAAattgttga
aaagaaatatttcggaATTAGAGGAAAGATGGAAAAAAGTGAAAGATCAG
AATGGCGGATTGGAACAAGAAAATGTTGGTTTACGTAACAGATGTCGAGA
AttagaagaaaataatgaagaaCTCAATACTCAATGTGAGAAGCTAAAGG
TCGAGTTGGAAGATATACCAGGCGCATGCGCTGAAAAAATGCGGAAATTA
GACGAAGATTTACAACAACAATTGAATCAATCTCAAGATGTAGCAAGAAA
ATTCCAGGAAAAGCTATCGAAGAGAgatgaaaagctgaaaatacTTAAAG
ACGATCTGAAGAACCTCTCCCAAGAGTATAGTGcattgaaagaaaaattt
gaagattcgCAAAATAAATCGAATGAAAATATGAAGATAAGAGAAATCTC
CGAGCAAATGGTTTCGCGTCTTCAGCAAGATTTACAGACTACTCGCAATG
ATTTGGATAATGCGAAACGAGTTCTACGGGATGAACAATCAAGAAGTTCT
AAAGAAAGGGAGACGTTGAAAAAAGAATATTTGGCGCTTCAACAACAACT
ACCCTCGTACGTTTTCGAGAAAGAACGCCAAAGCATGAAACAGGATTTGA
ATGCATACAAGGACCATGCCCAAAAGCTGTTGAATCGAGAGCAAGAACTG
AATGCTAAACTAAGGAGGCTGAgtccaaagtcatttaaaaagtgaatgtC
GATCAGAATCAGTGAAGAACCGCCAAAGAATAAAGAAGAATTTTTACAAT
CTCGCATCGATCAACAAGTCGAACTGATCTGTATTCTGAAACAACGCGCG
GACGAATACTTGCAGAAATATCTAACCAATGAAGAGCAAGttaaaacatt
acgtaatgatttAGAGAAAACTCAAAATGAACATTCTTCTGAAGTTGAGA
AATGTAAattgttgaaaagaaatatttcggaATTAGAGGAAAGATGGAAA
AAAGTGAAAGATCAGAATGGCGGATTGGAACAAGAAAATGTTGGTTTACG
TAACAGATGTCGAGAAttagaagaaaataatgaagaaCTCAATACTCAAT
GTGAGAAGCTAAAGGTCGAGTTGGAAGATATACCAGGCGCATGCGCTGAA
AAAATGCGGAAATTAGACGAAGATTTACAACAACAATTGAATCAATCTCA
AGATGTAGCAAGAAAATTCCAGGAAAAGCTATCGAAGAGAgatgaaaagc
tgaaaatacTTAAAGACGATCTGAAGAACCTCTCCCAAGAGTATAGTGca
ttgaaagaaaaatttgaagattcgCAAAATAAATCGAATGAAAATATGAA
GATAAGAGAAATCTCCGAGCAAATGGTTTCGCGTCTTCAGCAAGATTTAC
AGACTACTCGCAATGATTTGGATAATGCGAAACGAGTTCTACGGGATGAA
CAATCAAGAAGTTCTAAAGAAAGGGAGACGTTGAAAAAAGAATATTTGGC
GCTTCAACAACAACTACCCTCGTACGTTTTCGAGAAAGAACGCCAAAGCA
TGAAACAGGATTTGAATGCATACAAGGACCATGCCCAAAAGCTGTTGAAT
CGAGAGCAAGAACTGAATGCTAAACTAAGGAGGCTGAgtccaaagtcatt
taaaaagtgaatgtCGATCAGAATCAGTGAAGAACCGCCAAAGAATAAAG
AAGAATTTTTACAATCTCGCATCGATCAACAAGTCGAACTGATCTGTATT
CTGAAACAACGCGCGGACGAATACTTGCAGAAATATCTAACCAATGAAGA
GCAAGttaaaacattacgtaatgatttAGAGAAAACTCAAAATGAACATT
CTTCTGAAGTTGAGAAATGTAAattgttgaaaagaaatatttcggaATTA
GAGGAAAGATGGAAAAAAGTGAAAGATCAGAATGGCGGATTGGAACAAGA
AAATGTTGGTTTACGTAACAGATGTCGAGAAttagaagaaaataatgaag
aaCTCAATACTCAATGTGAGAAGCTAAAGGTCGAGTTGGAAGATATACCA
GGCGCATGCGCTGAAAAAATGCGGAAATTAGACGAAGATTTACAACAACA
ATTGAATCAATCTCAAGATGTAGCAAGAAAATTCCAGGAAAAGCTATCGA
AGAGAgatgaaaagctgaaaatacTTAAAGACGATCTGAAGAACCTCTCC
CAAGAGTATAGTGcattgaaagaaaaatttgaagattcgCAAAATAAATC
GAATGAAAATATGAAGATAAGAGAAATCTCCGAGCAAATGGTTTCGCGTC
TTCAGCAAGATTTACAGACTACTCGCAATGATTTGGATAATGCGAAACGA
GTTCTACGGGATGAACAATCAAGAAGTTCTAAAGAAAGGGAGACGTTGAA
AAAAGAATATTTGGCGCTTCAACAACAACTACCCTCGTACGTTTTCGAGA
AAGAACGCCAAAGCATGAAACAGGATTTGAATGCATACAAGGACCATGCC
CAAAAGCTGTTGAATCGAGAGCAAGAACTGAATGCTAAACTAAGGAGGCT
GAgtccaaagtcatttaaaaagtgaatgtCGATCAGAATCAGTGAAGAAC
CGCCAAAGAATAAAGAAGAATTTTTACAATCTCGCATCGATCAACAAGTC
GAACTGATCTGTATTCTGAAACAACGCGCGGACGAATACTTGCAGAAATA
TCTAACCAATGAAGAGCAAGttaaaacattacgtaatgatttAGAGAAAA
CTCAAAATGAACATTCTTCTGAAGTTGAGAAATGTAAattgttgaaaaga
aatatttcggaATTAGAGGAAAGATGGAAAAAAGTGAAAGATCAGAATGG
CGGATTGGAACAAGAAAATGTTGGTTTACGTAACAGATGTCGAGAAttag
aagaaaataatgaagaaCTCAATACTCAATGTGAGAAGCTAAAGGTCGAG
TTGGAAGATATACCAGGCGCATGCGCTGAAAAAATGCGGAAATTAGACGA
AGATTTACAACAACAATTGAATCAATCTCAAGATGTAGCAAGAAAATTCC
AGGAAAAGCTATCGAAGAGAgatgaaaagctgaaaatacTTAAAGACGAT
CTGAAGAACCTCTCCCAAGAGTATAGTGcattgaaagaaaaatttgaaga
ttcgCAAAATAAATCGAATGAAAATATGAAGATAAGAGAAATCTCCGAGC
AAATGGTTTCGCGTCTTCAGCAAGATTTACAGACTACTCGCAATGATTTG
GATAATGCGAAACGAGTTCTACGGGATGAACAATCAAGAAGTTCTAAAGA
AAGGGAGACGTTGAAAAAAGAATATTTGGCGCTTCAACAACAACTACCCT
CGTACGTTTTCGAGAAAGAACGCCAAAGCATGAAACAGGATTTGAATGCA
TACAAGGACCATGCCCAAAAGCTGTTGAATCGAGAGCAAGAACTGAATGC
TAAACTAAGGAGGCTGAgtccaaagtcatttaaaaagtgaatgtCGATCA
GAATCAGTGAAGAACCGCCAAAGAATAAAGAAGAATTTTTACAATCTCGC
ATCGATCAACAAGTCGAACTGATCTGTATTCTGAAACAACGCGCGGACGA
ATACTTGCAGAAATATCTAACCAATGAAGAGCAAGttaaaacattacgta
atgatttAGAGAAAACTCAAAATGAACATTCTTCTGAAGTTGAGAAATGT
AAattgttgaaaagaaatatttcggaATTAGAGGAAAGATGGAAAAAAGT
GAAAGATCAGAATGGCGGATTGGAACAAGAAAATGTTGGTTTACGTAACA
GATGTCGAGAAttagaagaaaataatgaagaaCTCAATACTCAATGTGAG
AAGCTAAAGGTCGAGTTGGAAGATATACCAGGCGCATGCGCTGAAAAAAT
GCGGAAATTAGACGAAGATTTACAACAACAATTGAATCAATCTCAAGATG
TAGCAAGAAAATTCCAGGAAAAGCTATCGAAGAGAgatgaaaagctgaaa
atacTTAAAGACGATCTGAAGAACCTCTCCCAAGAGTATAGTGcattgaa
agaaaaatttgaagattcgCAAAATAAATCGAATGAAAATATGAAGATAA
GAGAAATCTCCGAGCAAATGGTTTCGCGTCTTCAGCAAGATTTACAGACT
ACTCGCAATGATTTGGATAATGCGAAACGAGTTCTACGGGATGAACAATC
AAGAAGTTCTAAAGAAAGGGAGACGTTGAAAAAAGAATATTTGGCGCTTC
AACAACAACTACCCTCGTACGTTTTCGAGAAAGAACGCCAAAGCATGAAA
CAGGATTTGAATGCATACAAGGACCATGCCCAAAAGCTGTTGAATCGAGA
GCAAGAACTGAATGCTAAACTAAGGAGGCTGAgtccaaagtcatttaaaa
agtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042901XLOC_042901Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068804-proteinTCONS_00068804-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068804-exon-scaffold_49-1491911889:594044..594463TCONS_00068804-exon-scaffold_49-1491911889:594044..594463Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1510915933:594044..594463TCONS_00068804-exon-scaffold_49-1510915933:594044..594463Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1575043694:594044..594463TCONS_00068804-exon-scaffold_49-1575043694:594044..594463Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1491911889:594860..594966TCONS_00068804-exon-scaffold_49-1491911889:594860..594966Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1510915933:594860..594966TCONS_00068804-exon-scaffold_49-1510915933:594860..594966Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1575043694:594860..594966TCONS_00068804-exon-scaffold_49-1575043694:594860..594966Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1491911889:595331..595407TCONS_00068804-exon-scaffold_49-1491911889:595331..595407Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1510915933:595331..595407TCONS_00068804-exon-scaffold_49-1510915933:595331..595407Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1575043694:595331..595407TCONS_00068804-exon-scaffold_49-1575043694:595331..595407Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1491911889:595847..595950TCONS_00068804-exon-scaffold_49-1491911889:595847..595950Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1510915933:595847..595950TCONS_00068804-exon-scaffold_49-1510915933:595847..595950Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1575043694:595847..595950TCONS_00068804-exon-scaffold_49-1575043694:595847..595950Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1491911889:596252..596337TCONS_00068804-exon-scaffold_49-1491911889:596252..596337Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1510915933:596252..596337TCONS_00068804-exon-scaffold_49-1510915933:596252..596337Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1575043694:596252..596337TCONS_00068804-exon-scaffold_49-1575043694:596252..596337Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1491911889:596630..596699TCONS_00068804-exon-scaffold_49-1491911889:596630..596699Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1510915933:596630..596699TCONS_00068804-exon-scaffold_49-1510915933:596630..596699Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1575043694:596630..596699TCONS_00068804-exon-scaffold_49-1575043694:596630..596699Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1491911889:598436..599049TCONS_00068804-exon-scaffold_49-1491911889:598436..599049Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1510915933:598436..599049TCONS_00068804-exon-scaffold_49-1510915933:598436..599049Clytia hemisphaericaexon
TCONS_00068804-exon-scaffold_49-1575043694:598436..599049TCONS_00068804-exon-scaffold_49-1575043694:598436..599049Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:594044..599049 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.00435	4.41656	4.423	4.27165	28.5716	22.3901	16.2516	16.9678	14.3475	12.3624	13.5369	12.1026	7.59607	8.22025	10.2754	11.1811	8.2968	11.2005	6.79632	4.77536	7.48749	6.48683	5.99433	5.79943	21.0716	19.9764	5.06021	5.23675	3.09689	3.71222
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068804 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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