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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068812 ID=TCONS_00068812|Name=TCONS_00068812|organism=Clytia hemisphaerica|type=transcript|length=3174bp
GACGGTTCTCTTGGGAACTTCCTTTAATGtggattccaaaaaaaaattgt
ccgaATTCCTCAAAGATATCGAGATTTTGAAAGCGGGAACGAAAAATTAA
ATCTTCTTTAAGGCTTGACATTAAAACCAATACGAACCTGACTCCCGTAC
CTTCTTCTATAACAATATCCATATCTTGTGATTATCTCCGATCAGAGACG
TGATGACCGATCGACCGCGTAAACATAACTGTCAACATGTCTTCAAGTCA
ACTCCAACCAAACCACGGAAAATGTCTGAAGCCTTCAGAAGAACGTCTCA
AGTTGTATTCCAGGTGATGTCTTTAGGATCGGATATTTTACCCGAGTACC
AAGTGGAATCTCCAAAAATCCACCCATGGACAATTCTCCATTACTCACCA
TTCAAAGCCATCTGGGATTGGGTGGTCTTATTTCTCGTCATGTATACCGC
CATTATCACGCCCTACATGGCCGCCTTCGTATTAACCAGAGATTCCAACG
AGGAAACATTCGCGATGCATACATCTCATGCCGCTTCTGCAATCACCATA
GCTGATGATCCATTGGTCATCTTAGATTACATTGTTGATGTCATGTTTAT
TATTGATATTTTCATCAACTTTCGAACGACTTTTGTTGATGTACATGACG
AGGTTGTCAGTGATCCTTGTTTAGTTGCTATCCATTATATGAAGGGATGG
TTTGTCGTTGACTTGTTAGCTGCCATACCCTTTGAGTTACTCATCATGAT
TGGAAATACTGATCAGACGACCACGTTGATCGGTTTACTGAAGACGGCGC
GTTTGCTACGTTTGGTTCGCGTCGCACGGAAGCTAGACCGTTACTCAGAA
TACGGTACCGCCCTTCTCATGTTACTAATGTTTGGTTTCGCCCTAGTGGC
GCATTGGTTAGCCTGCGTGTGGTACGCCATTGGAAATTTTGAACGCCATC
AAGTCCAAGAAATGGGATGGCTTTATAAGTTAGGTATCAATACAAATCAA
CCGTATAACCGGACAGATtctaacagtggaccggacattcAAACCAAGTA
TTTGACAGCTCTGTATTTTACATTATCAAGCTTGACAAGTGTTGGGTTTG
GGAATGTATCAGCAAACACCAATAGCGAGAAGATATTTACCATTGCTGTT
ATGCTAGTCGGAGCATTGATGCATGCGGTTATCTTTGGTAACGTCACGGC
AATCATACAACGTTTATATTCGGGTATGGCCCATTACCATTCCACCATGA
GACGTGTCCGTGAATTCATACGTTTCTATCAGATACCGTCACCGTTGCGG
CAACGGTTGGAAGATTATGCTCAATATGATTACTCCTATACTAACGGTAT
TGATATGAACGAGGTTTTACGGAACTTTCCTGAAGGTTTACAAGCAGACA
TTTCGTTACACTTAAACCGTCATCTTTTGTCCAACAACTTGGCGTTCCGT
GGTTGCACTCCAGGTTGTTTGCGCTCGCTCTCCTTGAAGTTCAATACAAC
ACATTGTCCACCGGGTGATTACATCATTCACTATGGTGACGAAATCAACA
ATTTGTACTGGATCGGCCGTGGTACGGTAGAAGTTATACAGTGTGATAGT
ATTATCGCTATACTTGGTAAAGAGGATTCATTTGGAGAGAACTTTGGCCT
GACATACAATCGAGTAACTGGCAAAGCAAAAGCCAGTATACGAGCCTTGA
CTTATTGTGATTTACATTCCATTTCCAAAGAAAACCTCATGCATATTATG
GCAGCTTATCCAGAATTTCGAAAAACTTTCAATGTGGATTTGCATATTAC
TTACGATTTGAGAGATTCACAGCTTGAAGAAAAAGATGTCAACAGCTCAA
TCTTCAATTCCTCACCATCATTCAACGCGCAACGTTTCTCGAATAACGTA
CGTACTACGCCTTTCGATCGTCTATCGCCTAGTTACAACGGCTCACCTTG
CCGGACGTGTACTAGCAGCGGCTTCACTAAATCAACTACGGAGTTTTCAA
GCGATGAGCGACGTGCAAGTAGACCTTTATTAGACTCGTTATCTGAAGAA
GACCCATGCTCCTCCAGCAGTTGTCAAAGTCGCATGACTAAAAATAAATG
TCCAACATCTAATAAAATAGTTGATAGTTCTTTTATCGCGACGTCACCAG
TAGCTATACGAAGAGATACACATCTTTCAGCTACGTCTCATCATAACGTT
GCTGCAACGTCGTACCACGATGGATCTTGTACTTTAGAACTGAGACGAGA
AGTTGAAGAGATGAGAACCCATTTATTCCGTATTGAAAGTCTTTTGAAAC
AAGACATGAAAAAAGTTGTCGATTTGTTAGAAGAGAAAGTGACGTCAACA
TCTTCGACCACGCCCAATAAAACAAATAATGATagtaataataacaataa
tactTCTATCAAGAACAACAATACCCATAATGCAACAGTAGTCAAAAATA
ACAATAACCATACTTCGATTCCATCTACAACGACATCCAATCACAACCAT
ATCAAGGTTTTAACAACAGACAAAACTAAAATTAATTCTTCATCTTCAAA
CTCGAACAGGGTTAAGAACCAATAGCAATAAACATGATGTTTCGGGgaca
aaagaaataaagaaaaaggaaataacCGAGACTTTTTAGGTGATTCACGG
CAAAAAGTTGCAGTCGTTTAATAATTCACAGTGAATAAAAGTTGACCTtc
tctaatttgacgttctactattctaTCCGCTagattattcgataatattg
aaagtcaccgacAACGAAAAACTCTTATTAACGGTGCTCTGTTATTCAAA
TCCAAATCCGATTCTTGAATTAGATTAGAATTGAATTAGAGAACGTCAAA
AACTTTCCAATCTGGTGGCAGCTTTTTTACCGTAAATTCAAAAGTCACAg
catatttttggtttttcctgTAGAAATTTGTCAATATCTTTGATTTCAGT
AAAGAGATAtttacgcttttttataagaatatactttataaaaatattta
tgatgaaattggccaaaaatcaagaatatactaagaatatcaccatcatg
gagtTTGGCAACCGAACTTAAGTCATCTTACCCCAGTTTCACCGTgataa
attttatgaattttgtgTATGATTCATTTTCTATATTGTCTATATTCCga
ataaaaaaaacagtaaGTGCAGAA Run BLAST on NCBI transcript from alignment at scaffold_49:829238..845489+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068812 ID=TCONS_00068812|Name=TCONS_00068812|organism=Clytia hemisphaerica|type=transcript|length=16252bp|location=Sequence derived from alignment at scaffold_49:829238..845489+ (Clytia hemisphaerica)
GACGGTTCTCTTGGGAACTTCCTTTAATGtggattccaaaaaaaaattgt
ccgaATTCCTCAAAGATATCGAGATTTTGAAAGCGGGAACGAAAAATTAA
ATCTTCTTTAAGGCTTGACATTAAAACCAATACGAACCTGACTCCCGTAC
CTTCTTCTATAACAATATCCATATCTTGTGATTATCTCCGATCAGAGACG
TGATGACCGATCGACCGCGTAAACATAACTGTCAACATGTCTTCAAGTCA
ACTCCAACCAAACCACGGAAAATGTCTGAAGCCTTCAGAAGAACGTCTCA
AGTTGTATTCCAGGTTGGTTTTTTTTCCTTAGTTTCTTTTCCTTTACTAC
ACTTCTGTGTCACAGACTGCTGGAACTCCCAAATTCCCTGCtcaaaaatt
gcattccaaaactatccccactggatttttcatCCTTGGAACCGCCATTG
GAATTacgatagaaatttttatccccactaagTAAAAAAGTTCAaccgag
gctgtgagacaggggtgttttactAGAATTTTGCTATAACTTTTTGTGGG
ACTATAATGTTTTTATTCACGTTGTTTCCAGTGTGAAAAAGTTTCCTCCG
TCTCAGCGAAGTATACAAAGAGGCTTttcgtctcaaaattctgcatggct
caacaaaatttaaaaaaagtgctAATTTGCTATGTAAAAACCATTTTCTG
TGTCAGACAAAAATCCTTACTTAGGCCACTATCATTAACTTTAAGTAACT
TCTTTTCTTGTTGCATTTGAGTTTGCAGGGATGGGAGGAGAGTCAAGCAG
TTGCTCTTAACACACTGACCTTCATTACCACTGTGGCCAAGGAAGGAATC
TGAGAGCCCCCCCTCCCAGTGGACCCTCTATTCACGCAGTCacggaattt
tttttcgaaattcacgcattcacgcaagttttccttgagtttcacgcaat
aacctgaagttttttgggaaaaatcggggaaacattagaaaatcgggaaa
actgtaCATAATCGGtgggaaaaagggaaaattcacgtattcacgcatga
aatagcccagattcacgcattcacgcaaaccgctggagGCCATCTAAAGG
AATCGAAATAGCTACTGCTGATTTATAAGTAATAGTAATGATATGACATT
GAGGGAATTTAGGGATTAATACCCCGAGTATTAACGAAAAGTGGGTTGGC
CTTCACCCAATCAACTTCATGTGAACACTTGGTTCAAGAGTAATAATGAG
GTTTTGCATCAGACAACTCCAATAtatcattattttcttttttaagagaG
TGTGGGTCATTTGGATCATCGTCTTCTGACATTCCCCATTCTGTAAATCC
TAAACATTTTAACTTTGATGATATGTTTACAGTcatctctctctaattcg
aacttctataattcgattctttctataatttgaactaaAACATTAGTCCC
CTCAGTTTGGCTACTGGTATAAAATACTCTCcttaattcgaatctttctc
taattcgtaGAAAACTATTGGCCCCCTGAGTATTAAAACGAGTCGATATT
GTGCTTTAATAGATTTGATATTTTATCGTTAATAGCCCAGTAACTTAGAA
CTTTTAGAAAaccttttgattgttttcaaggGGTCCACCACTAGGCTGGG
ATAACTATAAGAAAACACTGGAAGAAGTTAGTACTCGAACCCGAACCCCT
GGTTTCTGACCACGATGACATAGCTAACTCGGTTGTCGTCCCTTTAAACC
TTACCTGCTTTCCAAAGAAGTCCTTTTTtatccattgaatttcaaattgg
GATGAAACAAAATCGATTTCCAAGTTGGTCTGTAATTCTAATTGTGGGGT
ATTTTTTCCACTCGAGACGAATTTTTGGCTAAATTTCCCGATTGGGTTGG
GGTCCCAGCACTGCGAGAAAAAGTTAGAGGTGAAAACAAAAAGGATTTAA
CAGTCAACCCTTTCTAATTCGAAACTCTACTATTCAAAACTagaatattg
gtcccctcagctagaaAGTAGTATacattactctctgtaattcgaatctt
tctttaaaaagGAGCTTTAAGGATCCctttagagagcgtcaattgATTTA
CAGACCCCCGTTTTTCACTTCTGGAAAGTGTTTTGATTTAGTAAGATCTC
TATTATAAGATTTCTATCTGTTTTCCATAAAGATTTCTTGCAGCTCTCGA
TGGGTTCACTcgagaaatgtttttgaaatcaTAAATCCAGTGACCTTGGT
GTTCTCCAGAGAATGGATTTATGATATCAACAACATTTCTCGTGTGAACC
CCTCGTGAGCTGCGAGACATCTTTATGGAAAACAGACAGAAATCTTATAA
TAAAGATCTCACTAAATCCAAACAGTTTGTCTTATACTAAGCTAACCTCA
AGACATTATTTGTACATCTCACGGTTTCAAAGCGAATTGCCCATTATGGA
TGTAAAGCAAACTATAATATATacaaatatttcagttaatGTTACTATAT
AGTCGTGACCTGTTCGAATCAATTTTAGGTCAAAGGTTGAAATCAGAATT
CTACAATGGTCATAGACCAAGTGGCACCCCTTCCAACTAAAACATAGCCC
AAAAAGCCACAATTCGACCCTTTGATCTAAtgattttcaaagaatattcc
aaaggcagtgccgtaggaagtaTTTTGATATTAGGGGCGGGAGTTTAGTG
AAACTGCGAGGGAGAAAATTTCATTTGGCGCCCAAGGGGGGGGATGAAAG
TTAAGCCTCTACATTGCTGGAAAATACACTAAAAATCAATGAATTCAATC
AAAgtatttattattttctttaaaatgtttataaccatctttgaaaaaat
tattgggtgACAATGCCCCTCTGGCCCCCGGTTGTAATCATATATATTTT
AAAGTATTTAGAACTTCTTTGTTTTATTCTGGATTGGTTTTTCTTTGAGG
CGACCTCTCGGGTACGGgacgccgaaccgggttctaCGCTGACTATTCAA
CCTTTCCCTTTCTGCTGTACTTAACTGTATGGTCAGACTTTGTGCCtatg
ttttaatttctttcttcttgttaAGCTGACAGGTGACTCTAGAGTGGCAG
GAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGACTCTAGAGTGGCAGGAGATGCTTACTCAAGGTACCG
CACCTGATCTCAGACTTCGGTCTTCAGCTTATCACTTCCTTTTGTGTCTT
GTGTAttccttttgtttaaaaaaaaattatttttttcttttcttcagtGT
ATATAACTTCACTATAATTCTTACTTCCCGGGCAGAATGGGTGATTAAAA
CACGATACGGAAGAAATGTGCCAAAAAGTAGATTCTGTTGCCTCacaaaa
ttttggcaaaaaaaatcaaggagAAAATGTTAGAGAAAGTCCTACATTTC
AAAGAATGATAATGTCATCAAGTTGCGATGATGCCATCAACCCTTTAAAG
ACCGATGACGAGATATATCGTCATCGTGTTCCGTGCCAAAAATACTGATG
ATGAAAGACGCAGTCGTGAAAGGGTTAATGATGGGGAAATTTTCATCAAA
GATGCTCATTCGGTTTTGCTGCGCCTTTTCGAATTTTAAGTCAAtcggat
aaatatttcaaaagtaatcGAAATTTTCGTTTAGCGACATTTTCTCTATT
TTAACTTCTAAGTCCACTTCAATGAAATAAGAATCTCGAAAATATCGTAA
TTATTTCTAAGCATAGTGATTTATATATTAAGCAAAGGAATTTTTCATTG
GATTTCTTTTATGCTTAGCGGTAGGAACTCAAGATTTTATGGcgtaaata
aaaagaaagttaattcGCCCCCTTCGGGCcaatattttcacttttgaaTA
TATTTCTTCAAAATGTATTTCAAGCAAATTTGTCCTTCTAATTTCTTTCG
CTGCAGGTATGAAAATAAATATCTCCCCATCGTGTTTTTCTCATtacatt
ctttttctttaataacaacaattttataagaacaacgaggctcaaaatcg
ccaaaaaaaagAACAatttaagaacaatgctgagcctggaattactcagt
ttcaagcaatttaggggtcaaagtttAGTGAAAATTGAGTATAAAgctta
aaatacctcaattccACCTCATAAACAAGAACGGGATAcagtaagaacaa
tttgaggctaaaagaacaagaaataagaacagtcgattctcagcaaaatt
ttactaatgaaaagaaaagaaaagagagtATATAATTCGTTTCAATTGTC
ACAATTAGGAATCTTAATTGTGTGTCTTTTGTGATGAATTTTTAGAGTAA
TTGGAGAACCCCTTCCAAGTAATCTCATTTAAAAAATCGTTGATCGGTGT
CGATTGTTATGCTTTAGTAGTGTTTAcgttattttattaaaattttacag
GGAAAAATTCCTAAAACTGACAAAAAATATCcagaaattttcttataaat
cctatgaaagaatataattttaaagaaatctccatatttttagaaaaagg
gagagaaaaaaataacatttcagTGTACTATCTATACCTTTCTAAAATAA
CATGCAAACACAGCAGAACGTCGCATGTAATTAGAGATATTTCtctcaag
aaatgaaaaaaataaaataaaatcttgaaaagGGGTACTTATTGAAATAT
AGTAAGTATACTTCTGCCTGGTAGAAGAGtgaattttctttctgaaaaaa
atgtataacattgTACATCTTTCTAATACATGAAGAATGAAAGAAGGAAA
ACAtgttttgtgaattttttgaaaaaatcgtaTATTAGTCAACTAAGAAA
gaagtataaaaagaagaagtttttgaaattttgtgaagtaATTATTAAca
acaatttgaattttgacataacgagaaaaataatttggaaTCTTACAAAG
GTTTTCATAATGGTGTATAAAGCCTGGGACACGATTTCAAAAACGTTGTA
CGGCAAACGAGTTACCGTGGTACGAAAACATAACCATCGTCAGAAGCGAC
GTACCAGTCAGAAAAGACGTATGTCACAAGCTATGGAACGTTCCTCTATG
GCTGTCTTACAGGTTACTCTATTGTTctagtgtttttttatttttttgtt
ttctttccgAGCATCATATCAGGCACATTACTAGTCTGAATCGcggacct
ctacaaaaccccaggtagtatataaggagcacgaatccgttagtggatgc
gaGCAGCCTAGCACATTACGCAATTTATACACATTTGTAAAGAACACATC
ACTAGCTTTTTTTACATCGGCTCTTTATCCGCCGATGCCTTATTTTGAGC
TTACGCCCATTTAGGGCCGTTAATAAATAACGACTAAACTTGTTAAAATC
AATAACAGGCTTTAAATACTGAATATTGACTTTAATTGGCAATAAATACC
CTGCTTTGGTCGCTACTTTATTTATAGCTGAAAAAGGACCGAAAGTCAGT
ATCTCCTTCATAGTTTCTGGGATCTGAGGTTGTGGTTGTTCTTAATCTGA
TCTTGATTTTTGGCTAAATGTCAGTCTTGCTCCTATAAAAACGTGTTTAC
TCGATAATTTAACGACTGTCCGATTCTACTACTCAGAATATCTTATTTAC
AATCCCTGATGTTATATAGTAAATTATTCTTCTATATTTGATACATCTAG
AACTTTAAATGCAATGTCGGTGTATATTTTCCAGCCCTTTATATCAATCA
Aaaatacccccttctcacagacccactggggacccttcccactggaatat
tgtccaaaatattgtccccagtggaaaattatccaaaatattgtccccag
tggaaaattatcctccaattttttgtctccactgaaaataatcaaataaa
ccaatcctcgctGCGAAACATGATGctttttttcccatccccactgaatt
ttgtgacttgaaaaaaatagaattgaaatccccagccataaaaaatatga
gaatatcaatccccattgagtttcagtccgttgtttttattcccactggc
tgaaaaaatcccgcTGCCGGGGTCTGTGAGTAGGGGGAGTTCAAAACCAA
TCTTATCACTTTGATAATGATTTGGTGATACCCTGTAGAGAGCTCattta
aaactaaaatctatttcattttaaagaattcgcgtgatatatgtattttt
tttctttcccttaaaaaaatgaattaatatacagtattaattttttgaaa
ttttagcgttattttgtgatttttctttttcaaaatttaaatttcttgtt
ATGATACAATTTTGCAGTGGGAACATCTAGTTTTTTTTAAACGCCTCGGT
TTTCTTTTTATGGCTTAATTTGCTAGATCCttcaaaaaaaagggaaaaag
tgGGAATCAAGAAAGATGTACCTAAAGATACTTCGTATATTGAGAACGAA
GTAAGATGtaggtaacctgataacagctggtcaTGATTTTCTTACTGGCA
CGGTAACCCTCTGAAGgcccttgaaaattaaccatctgaggaaaatagtc
ttTCCGCGGTGAATTCTAcgacaagaatcttgttgtgcgccggaaagtca
aaaactaaattttcctgatacggcgccctattttTAAACACTATCGCGca
acttttttttgtcattcccagtcctgtTAGACAAGCCAGTTGAAGCGCGG
TCCTCACAAATTCGtcatattgttttgttttcacccatctctttagagct
tcagtgtGGCGGTGGGCAGAAACAATCTGATCTCAGTTTAGATGTAGGTA
TCTATTCACCTATCAAGTGCCAAAATATGTGTTGAGACGTCAAGAGTGTA
TTTTTCTTGATTGGGATGTGTACTCGCattataaataaacaaaaattaga
CAATAAGCCTTTTTCATAAATAGTTTTGAGTGCAACGAGTGCCTCGTtct
gaaaccattaccaaggtgattaaatctCTTGAGTCTTCGAATGTTACTTT
CATATATAGAGTAAACTTCTAATGGACTATTCTGGTGGNttatgagcatg
catacatcgtaacttttttaatcgtagggcgagcttggttacaatagcat
acttctcctgtttctttatacctccatggtgggaatcaatacactcttct
cgagatgcataaatttattgttgtcctcgttttcaaacagatttcattgc
tataaaataacacattcacaatgataattgtgttgttttcacctcatgag
acattttgaatttcaagtacttttgttttagagttaatgtttgccttttg
gggatttaaattggtttaaatgtataatttcatagcaatgaaatctgttt
gaaaacgaggacaacaataaatttatgcatctcgagaagagtgtattacc
atagcaatattttgaaaactaaGTGCTctcatgacgtaatttttaaaaag
gttttcgGGTCCTTCTTATATGTGTGAATACGTtggaaaacttaaaaaat
tacaTCTCAAAATCATTTGAACAAGAAATCTTCTTCCCTTATCAGCTCGA
GGGTAAATCTCTAAATATGTACATACAAATGATATAACGCCGTTGACAAA
TCAAGAAGTCCAATCGTCCCAAATCATTGCCTGAGAAAACTAAGAGTTTT
TCTGTCTGTCTGagcataaattttgagattgaccctGTTTCATGTATATG
GGACCCTCCTCGCTATGTAAGATAAGCCAATGTCGAAATTAAGGCTAGCT
AGACAGAAAAACTCTTAGCTTTCTCAGACACTAATTTTGTGATTTAATGG
CGATATGCTTAGGACAGCCAATTTGTAATCTTGTTTACGATTCATTATAC
AATCTGCCCGTTGAGTCCCCAGTTTGAAAATAATCCTTCTAGTTTAGTTG
ATTATCTAACAAGTATATTGTTCTGGCTCTAAATGGCCCTAAGTAATTGT
AAAGTTTATTGTTCTCGCTCTAAATGGCCCTAAATAACTTTAATAAGTTT
ATTTTACCAATACTAATTGGTCAAAGGTCGCCGCTATCCCCCAAAAATTT
ACTTAGGGCACAGGGGATGTCAGAATATGAACCAAACTTCGGGccgattg
attgattgattgattgattgattgattgattgattgattgattgattgat
tgattgattgattgattgattgattgattgattgattgattgacgtTTGC
TCCGTCTTATGAATGTTAAATTTTCCTTGATTATACATAACGCTCTTTTC
ATGAAACTTTTTGGGGGTCTTGCGAAAAACTAATAGAATTAAATATAGGT
TAGAAACCAagaaaaagaaatggaaaggTTTCCAGCAAGGTTGTTTAAGT
ATTATCGACCTGAGGTTTTCATTAAGGGGAAATCtataaaaatgtctttg
ttaCAGGGTCTCACCCGGTCTCAACAAAATAATGTGTATTTATTAGACTA
TTTAATTAAGttttatgaaatttaacttCAGGTCTATTTTTTTACCAACC
gtagtttttcctttttttatatcctttctatgctcaaacaaaatttcttc
tcttttttatagGTCCAGTACCTTTTTTTtgcttcttcatttttagaaat
tatgatttttgttttttatataattattatggtttctcttttttcaatta
tatatttggatttcttaaactttttttgtatttgtttgTTTGGGATGTGG
AATGGTGGAATGTTGATTTTTAAGTTGATGAAAACATAGCTATCCGTGAA
AAATACTGTAATATCTATACTCCAGAAAAAGTGAAATATCgaactacctt
attacacgaatattattAGACAAATactcaacggccttgaaattaacacg
caaaaaattagcacgacttttatttgctttttcaaggacaccacggctgg
ttttaattaagggggtttttattaacacgaaatttttcaattcgtgttaa
taaaatgactagcaatatttgtgtaataaggtaaatCATAACTTTAAACA
GTTGTACTATACTATTGGTAGCTTGTAGAAATGGGACTAAAACCTACCAA
AAAAGAAGGGGAAAATTTAAAGAATCAAGTGAAATATGGTACTGGAACAT
CTGATTGTTTGATTTGGGATGGCACTGTGGACGGGGGTGATGTCTTTACC
GGAAAATCACGATCGGTCAAAACACCAGTGAGCACTTATTGGTAACCTTC
GAAATGATTACATGGACATTAAGCTATAATTTAAAGGAAATTATTTAACG
TCTCCAATCTCCAACGATTGCCTTActcagcatttttaaacaaaaggaaG
TACAAGTTTCTCCCCTTTTAGAGCCGAGCGAGCTTAATATTtaagaaatt
attttgtttattatgttttgtcagcataaagaaATTGGCTCAAAGCGGAA
GGAAAACACATTAAATAGATTTTGTTCCTGAAGCGAGGTTTTTTAAAACC
CACAGAGTTGAAATATAAATATATCAAATCATGCTTGATTAATTGGTGAT
TTATTCTAACCAAGAAAACGTATTGTTTGCATCAGCAGAATTCCGAATCA
TAAAATTCTGGATGATTGTCTTTCTTATCATTATGTATGGTTTTATCATA
GATGTGCTCAAAAGTTGGCCTTACTAAAATCCGGTGTCTAGCCAACACAT
CCTCACACTTCTACTACCATACATACGTGTAGATATGTAAACATCCGAAA
ATCTACTATACTGGCAGTTACGGTAAATACTATATCTACCATTAcagtaa
aaataataatttagtAGATTTACGGATGTTTACATATGTATATACATATA
GTAGAAATAAGCGCGAGATTGGCCTTGTGTAGCCCGGCACGTCTATCTGA
CGTTACAGGTTTACAATTATTTTCAGTTTGTAGTATGACATCGATCTCTA
ATCGATAACAGTGTAACTTCATACAGTGTGTAccaaaaaaagcggacaaa
tttttacaTACAGTAATAATCTCCAAAACTCATCATCTTAACTTAGGGCT
TAAAATGTTTGTAATaggatttaaattctttgttCAATCAATAGGTACTA
TACTATAGGTATTCAATTTCCAAGAcgattgaataggtttttgagGTTGA
AATATTAAGTATTCAAGTCATAAAACTTTGTATAAATCATTAGGGTttta
ctttatttaaaaaatgtgtccgctttttttgggacacactatATATTGAA
GACTAACAGACTGCCCACCCATCATTcagaagtaaaaaataattaccttt
ttttatatacatttcAGGTGATGTCTTTAGGATCGGATATTTTACCCGAG
TACCAAGTGGAATCTCCAAAAATCCACCCATGGACAATTCTCCATTACTC
ACCATTCAAAGCCATCTGGGATTGGGTGGTCTTATTTCTCGTCATGTATA
CCGCCATTATCACGCCCTACATGGCCGCCTTCGTATTAACCAGAGATTCC
AACGAGGAAACATTCGCGATGCATACATCTCATGCCGCTTCTGCAATCAC
CATAGCTGATGATCCATTGGTCATCTTAGATTACATTGTTGATGTCATGT
TTATTATTGATATTTTCATCAACTTTCGAACGACTTTTGTTGATGTACAT
GACGAGGTTGTCAGTGATCCTTGTTTAGTTGCTATCCATTATATGAAGGG
ATGGTTTGTCGTTGACTTGTTAGCTGCCATACCCTTTGAGTTACTCATCA
TGATTGGAAATACTGATCAGGTATTAACAGTTTTTACATTGACTAATTTT
TACCTTCCATAAACTACTAAAAGTTGGAGGACTGTTTTACGTTCTGCTTA
AGCAAAGCATAAAATGATGGCTGCCATATTGATCTAGGCTATTTACTCGC
GCCTTCAAGTCTATCAAAAATGAACCCCGGGCTGATGTGCCCGATTAAAG
AGAGGAACGGATATTATGTTATAGAGTAAAATCCTCAAACCTCTTTTTAT
CTCATCTGGCTTTAGAATAATGGGTTAGAAAACCTATAAGAATCTAGAAT
TCCAGAAGGTCAGGCTGATCTAACAGGCTGCATACGTTACAAAGATTGAA
CTGAAccttttgaaaatatcttttctgCTTTCCTTTCAATGTtaagaaat
ttttactttattttatttattcataGACGACCACGTTGATCGGTTTACTG
AAGACGGCGCGTTTGCTACGTTTGGTTCGCGTCGCACGGAAGCTAGACCG
TTACTCAGAATACGGTACCGCCCTTCTCATGTTACTAATGTTTGGTTTCG
CCCTAGTGGCGCATTGGTTAGCCTGCGTGTGGTACGCCATTGGAAATTTT
GAACGCCATCAAGTCCAAGAAATGGGATGGCTTTATAAGTTAGGTATCAA
TACAAATCAACCGTATAACCGGACAGATtctaacagtggaccggacattc
AAACCAAGTATTTGACAGCTCTGTATTTTACATTATCAAGCTTGACAAGT
GTTGGGTTTGGGAATGTATCAGCAAACACCAATAGCGAGAAGATATTTAC
CATTGCTGTTATGCTAGTCGGAGGTTAGTATGTTAGTAATAACATTAAGT
TGAAGGTCTTTTTTAGGACGTGTGACAAAGTTTTAGCGCTGCGAAACCTA
CTTTTGTTTATGGTCTATTTCCATGTGCAAAGGGAAAGTTCACCACTTCC
TTCAATTCTATCGGCCTATTTGAATGAAGAGTGTATTTCAGACACATTTT
TGGGATTAGGTAAATGATTAGGACCCTTAAAAATTATTTGTAACATGGAT
AAAATCGTAGACGATTTCCAAGCGTCTGGTTTGAAGATCAAGGAATTTAA
CTTAACATTGCTTCATTATTAGTTCTATACTTAGTTCTTAGCAGTTAAAA
GAATTACCCATGAAAACAGAATACATCAGACTATTGAAATGGGAGCCATT
CGGTAATTCTCGGTGAGATTTACGTGGTCGCACATTACAGTTTTAAAGGT
TAGTCTGATGTATTCTGTTTTNATTTAACTTAACATTGCTTCATTATAGT
GACCTTTAAAACTGTAATGTGCGACCGCGTAAATCTCGCCGAGAATTACC
GAATGGCTCCCATTTCAATAGTCTGATGTATTCTGTTTCCATGGGTAATT
CTTTTAACTGCTAAGAATTATAAAGTAAAAGACCTTGGTAAGAACGGGTC
ATGGATTTGTTACGACCCTTTCTTGGTGGCCTGGTGGCgcatttcaaatt
tgaatcCAAACATAGGCATAGGGGTACAAAACCTTTTGTTTTCATCTCGT
CCGTGGTCGAAAGATgataagtctgcgaccgcagtcggagacgactaggg
gagggcgccactctttctccctggattgctcaacttacccttgatccttc
ttttaattgctgagcatcaaccagagaggcatcaagtaccattttaggaa
tctttggtatgacccggctggggttGAACCAACAACCTTGCGAaacgtag
ccggatgctctaccactgcactacggtcgaaAGATGATAGTGATGATGAT
CAATGGCGTATCGGATAGTTGAATGACTAGAGAGCTAACAAACCTAAAAC
TTCTACTTTCTACTTTCAGCATTGATGCATGCGGTTATCTTTGGTAACGT
CACGGCAATCATACAACGTTTATATTCGGGTATGGCCCATTACCATTCCA
CCATGAGACGTGTCCGTGAATTCATACGTTTCTATCAGATACCGTCACCG
TTGCGGCAACGGTTGGAAGATTATGCTCAATATGATTACTCCTATACTAA
CGGTATTGATATGAACGAGGTAAGCTATGCGATCGCCTTCTAGAATGACC
GACGCGCTCAACAACATTTGCCCAACACCCATTTCAATAGCCGGGTGGGA
GGTGGAGCACTATTATGTCTctatgaataatttttttaactgcTAAGTAT
ATTTGTTATTGAAATTTGTGGTGATAATGTCTCACAATACTCAAAGCATA
GTCCTTAAGCAattccaaaataattattttgagtttttttaaggtATACC
AGATTAAAATGGTTGCGTCATTTGCTAATGTAACATTTTTGGAAGTTGTG
TTTGAATCCGAACATAAGggtacaaaatctttttttttcagatcaTAAGA
GCCAGTAGAGTCattcagattttttttgtaattagaaTTTATTATTGAGG
TATTtctcaatagacgatatcggcttaacgtgaaaactcagatttgatcc
ccgaatattgcccacaatgctttgtgcggaaaaattttcaccgtgaactt
ttttccgcgcaaagcattgtgggcaatattcggggatcaaatctgagttt
tcacgttaagccgatatcgtctattaagaAGGTTCCACCTGGGTCTGTAA
TCACAGAAATGCTCAAATGGAATCTCTTTTTCTTTCCACTTATACAGGTT
TTACGGAACTTTCCTGAAGGTTTACAAGCAGACATTTCGTTACACTTAAA
CCGTCATCTTTTGTCCAACAACTTGGCGTTCCGTGGTTGCACTCCAGGTT
GTTTGCGCTCGCTCTCCTTGAAGTTCAATACAACACATTGTCCACCGGGT
GATTACATCATTCACTATGGTGACGAAATCAACAATTTGTACTGGATCGG
CCGTGGTACGGTAGAAGTTATACAGTGTGATAGTATTATCGCTATACTTG
GTAAGCAACTTACTATAGTCTAAAACCTTTTAAAGATCtaaagtttgcga
ccgcagtcgaagtagacctgaaggctcctctttcgatagctatctacccg
aaggtagcgGATGGCGCCACCCTTGCTCCCTGGATTGCTTCACATGCCCT
TGTTCCTTCCCTTAATTGCTGagtatcaagcagagaggcatcaagtacca
tttttgtacTAAATGCAATAAAATTTCTGGTGTAGAGCAGCGAGTTAACG
GCTCCGTTTTTCGATTGACAATTGTAGTGGAGTTCCAcgaattcgaactt
ctattattcgaatctttctctgataattcgaactaaaatattggtcccct
cagctagaaAGTTGCTTtaatactctctgtaattctgaatctttctctaa
ttcgaagaaaaattctcggtcccttgaagatcgagtTAGAGAGAAAGTTA
ACTGTATTTACATTGATGGATCGAAATTTTACATGTACCAAATTGTAGTT
TAAAACGCATTTAAAACATTTATTCTTAGGTAAAGAGGATTCATTTGGAG
AGAACTTTGGCCTGACATACAATCGAGTAACTGGCAAAGCAAAAGCCAGT
ATACGAGCCTTGACTTATTGTGATTTACATTCCATTTCCAAAGAAAACCT
CATGCATATTATGGCAGCTTATCCAGAATTTCGAAAAACTTTCAATGTGG
ATTTGCATATTACTTACGATTTGAGAGATTCACAGGTGATGGGATTTCAT
GTGTATCGTGGGATTGATTTGAACCCCgtttttttctcaacttcagttga
tgtagaatctgagaatgtctgtgtgtccTAAATCTAAAATGGTTgggttt
ggctgaaattttgcacacttattCCTCgggtgaataaatatttttagggt
gtttttttttcatttttcaaaatttttgatatttcggGCATGTGGAAAAG
TTTTCGTTAAAGTGAGACTAAAACTTTGGGTAacctggagactttaaaaa
tggttggatttggcttaaattttgcacactaTTATTTCATACCACTTGCT
TTAAAAAGTTGCGACCATTGTTAGGTTATTGCTTGACTTGACTTGTCAAT
TTCAAATAGTTTAGTGCATAACTTTGAACCATTTTTCTCTCGTTTCGTAG
CTTGAAGAAAAAGATGTCAACAGCTCAATCTTCAATTCCTCACCATCATT
CAACGCGCAACGTTTCTCGAATAACGTACGTACTACGCCTTTCGATCGTC
TATCGCCTAGTTACAACGGCTCACCTTGCCGGACGTGTACTAGCAGCGGC
TTCACTAAATCAACTACGGAGTTTTCAAGCGATGAGCGACGTGCAAGTAG
ACCTTTATTAGACTCGTTATCTGAAGAAGACCCATGCTCCTCCAGCAGTT
GTCAAAGTCGCATGACTAAAAATAAATGTCCAACATCTAATAAAATAGTT
GATAGTTCTTTTATCGCGACGTCACCAGTAGCTATACGAAGAGATACACA
TCTTTCAGCTACGTCTCATCATAACGTTGCTGCAACGTCGTACCACGATG
GATCTTGTACTTTAGAACTGAGACGAGAAGTTGAAGAGATGAGAACCCAT
TTATTCCGTATTGAAAGTCTTTTGAAACAAGACATGAAAAAAGTTGTCGA
TTTGTTAGAAGAGAAAGTGACGTCAACATCTTCGACCACGCCCAATAAAA
CAAATAATGATagtaataataacaataatactTCTATCAAGAACAACAAT
ACCCATAATGCAACAGTAGTCAAAAATAACAATAACCATACTTCGATTCC
ATCTACAACGACATCCAATCACAACCATATCAAGGTTTTAACAACAGACA
AAACTAAAATTAATTCTTCATCTTCAAACTCGAACAGGGTTAAGAACCAA
TAGCAATAAACATGATGTTTCGGGgacaaaagaaataaagaaaaaggaaa
taacCGAGACTTTTTAGGTGATTCACGGCAAAAAGTTGCAGTCGTTTAAT
AATTCACAGTGAATAAAAGTTGACCTtctctaatttgacgttctactatt
ctaTCCGCTagattattcgataatattgaaagtcaccgacAACGAAAAAC
TCTTATTAACGGTGCTCTGTTATTCAAATCCAAATCCGATTCTTGAATTA
GATTAGAATTGAATTAGAGAACGTCAAAAACTTTCCAATCTGGTGGCAGC
TTTTTTACCGTAAATTCAAAAGTCACAgcatatttttggtttttcctgTA
GAAATTTGTCAATATCTTTGATTTCAGTAAAGAGATAtttacgctttttt
ataagaatatactttataaaaatatttatgatgaaattggccaaaaatca
agaatatactaagaatatcaccatcatggagtTTGGCAACCGAACTTAAG
TCATCTTACCCCAGTTTCACCGTgataaattttatgaattttgtgTATGA
TTCATTTTCTATATTGTCTATATTCCgaataaaaaaaacagtaaGTGCAG
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068812-exon-scaffold_49-1491911889:829238..829550 | TCONS_00068812-exon-scaffold_49-1491911889:829238..829550 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1510915933:829238..829550 | TCONS_00068812-exon-scaffold_49-1510915933:829238..829550 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1575043694:829238..829550 | TCONS_00068812-exon-scaffold_49-1575043694:829238..829550 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1491911889:839605..840057 | TCONS_00068812-exon-scaffold_49-1491911889:839605..840057 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1510915933:839605..840057 | TCONS_00068812-exon-scaffold_49-1510915933:839605..840057 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1575043694:839605..840057 | TCONS_00068812-exon-scaffold_49-1575043694:839605..840057 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1491911889:840464..840860 | TCONS_00068812-exon-scaffold_49-1491911889:840464..840860 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1510915933:840464..840860 | TCONS_00068812-exon-scaffold_49-1510915933:840464..840860 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1575043694:840464..840860 | TCONS_00068812-exon-scaffold_49-1575043694:840464..840860 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1491911889:841907..842106 | TCONS_00068812-exon-scaffold_49-1491911889:841907..842106 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1510915933:841907..842106 | TCONS_00068812-exon-scaffold_49-1510915933:841907..842106 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1575043694:841907..842106 | TCONS_00068812-exon-scaffold_49-1575043694:841907..842106 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1491911889:842735..842987 | TCONS_00068812-exon-scaffold_49-1491911889:842735..842987 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1510915933:842735..842987 | TCONS_00068812-exon-scaffold_49-1510915933:842735..842987 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1575043694:842735..842987 | TCONS_00068812-exon-scaffold_49-1575043694:842735..842987 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1491911889:843517..843722 | TCONS_00068812-exon-scaffold_49-1491911889:843517..843722 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1510915933:843517..843722 | TCONS_00068812-exon-scaffold_49-1510915933:843517..843722 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1575043694:843517..843722 | TCONS_00068812-exon-scaffold_49-1575043694:843517..843722 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1491911889:844138..845489 | TCONS_00068812-exon-scaffold_49-1491911889:844138..845489 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1510915933:844138..845489 | TCONS_00068812-exon-scaffold_49-1510915933:844138..845489 | Clytia hemisphaerica | exon |
| TCONS_00068812-exon-scaffold_49-1575043694:844138..845489 | TCONS_00068812-exon-scaffold_49-1575043694:844138..845489 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:829238..845489 + |
Blast
BLAST of TCONS_00068812 vs. Swiss-Prot (Human)
Match: KCNH6 (Potassium voltage-gated channel subfamily H member 6 OS=Homo sapiens GN=KCNH6 PE=1 SV=1) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 309/520 (59.42%), Postives = 406/520 (78.08%), Query Frame = 2
Query: 263 PRKMSEAFRRTSQVVFQVMSLGSDILPEYQVESPKIHPWTILHYSPFKAIWDWVVLFLVMYTAIITPYMAAFVLTRDSNEETFAMHTSHAASAITIADDPLVILDYXXXXXXXXXXXXNFRTTFVDVHDEVVSDPCLVAIHYMKGWFVVDLLAAIPFELLIMIGNTDQTTTLIGXXXXXXXXXXXXXXXXXDRYSEYXXXXXXXXXXXXXXVAHWLACVWYAIGNFERHQVQ-EMGWLYKLGINTNQPYNRTDSNSGPDIQTKYLTALYFTLSSLTSVGFGNVSANTNSEKIFTIAVMLVGALMHAVIFGNVTAIIQRLYSGMAHYHSTMRRVREFIRFYQIPSPLRQRLEDYAQYDYSYTNGIDMNEVLRNFPEGLQADIXXXXXXXXXXXXXAFRGCTPGCLRSLSLKFNTTHCPPGDYIIHYGDEINNLYWIGRGTVEVIQCDSIIAILGKEDSFGENFGLTYNRVTGKAKASIRALTYCDLHSISKENLMHIMAAYPEFRKTFNVDLHITYDLRDS 1819
P K+ E + ++ V QV+SLG+D+LPEY++++P+IH WTILHYSPFKA+WDW++L LV+YTA+ TPY AAF+L+ D +E + A + T + PL ++D IVD+MF++DI INFRTT+V+ +DEVVS P +A+HY KGWF++D++AAIPF+LLI +D+TTTLIGLLKTARLLRLVRVARKLDRYSEYG A+L LLM FAL+AHWLAC+WYAIGN ER ++ ++GWL LG+ + YN +D SGP +Q KY+TALYFT SSLTSVGFGNVS NTNSEK+F+I VML+G+LM+A IFGNV+AIIQRLYSG A YH+ M RV+EFIRF+QIP+PLRQRLE+Y Q+ +SYTNGIDMN VL+ FPE LQADI LHL+R LL + AF G GCLR+L++KF TTH PPGD ++H GD ++ LY+I RG++E+++ D ++AILGK D FGE L + GK+ A +RALTYCDLH I + +L+ ++ YP F ++F L +T++LRD+
Sbjct: 209 PHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLS-DQDE------SRRGACSYTCS--PLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEHKIGWLDSLGVQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFSGAGKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSL--HAQPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFAESFWSKLEVTFNLRDA 717
The following BLAST results are available for this feature:
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