TCONS_00068843 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00068843
Unique Name	TCONS_00068843
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3466

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_49:282082..295422-

transcript sequence

>TCONS_00068843 ID=TCONS_00068843|Name=TCONS_00068843|organism=Clytia hemisphaerica|type=transcript|length=3466bp
tctggttatcccCCTTCAATCAATATAAAATTTGCGAACGATCGAtacaa
tgtttttttataatcttaTAATATTCTTTTGTTAGGCATGGAGGAaataa
caaaattgaaaaaagagttGGTGCTATTGAATGAAGATATTGAGAATATA
TCAACAAAATGTGAAGAAAAGTTGcctaaagaaatattttcagaGGCTGA
AAAGTTTACCTCTGCAGTCACATCCTTTAGAAAttccttgaaaattttca
agactAAGATAAAGAGGGAGCAGGATGTTTTGATGGAGGAAGAGAATGAA
GAGAGTCCTGATGGACAAAGGCCATTGGAAATTGCTACCAAAGACATGAT
AAGCAATACACAACATGTAGAACTtaccaacaacaacaataacaacacTG
ATGATGTCATTGCAAAGGATAAGAAGGAAGAAGAAGAGGATTTTTGGGgt
gatgatgattttgatgatgacgatttgttgaaagttgatgTTTCTAATGT
CTCAAACTCCGTCCATGaacAAGAACATCAAACAAATACCAGTTTGAAAT
CACCAGAATCTGTCAGTACGCGGAATAATTCTGAAACCTCTACAACAGAC
AGTTTAAATGATGTTCAGCTGTGTGATTTGACTTCAAttGCCCAACCAAC
AAGTGAGCACTTGGATGTTTTGAAAGCTACCTTcgggttttcaaattttc
gttcGACACAATGGGAGATTATCAGAGCAGTGATCGAAGATAGAAAAGAT
GTCTGTCTTGTGATGGCTACAGGTGCTGGTAAAAGTTTGTGCTACCAATT
CCCTCCAGTATTCAAGAAAGGAGTATGTGTTGTGGTCTGTCCTCTCATCT
CTCTTATGGAAGATCAAGTTCATGCACTGAAttCATCGAATATCCCTGCT
GGTTACTTAGGAAGTGCACAAACCAACTCTGCCACCATCAAGAACGATGT
GTTGAGAGGANAGGAAGTGCACAAACCAACTCTGCCACCATCAAGAACGA
TGTATTGAGAGGAAAATTGAACCTGGTTTACGTCACGCCTGAATACCTTT
GCGCATCTCAAAATTTCCTCAAGGAGTTGAGTGAAAAGACCAATTTAGTT
TGCGTTGCAGTCGACGAAGCACATTGTGTCTCGCAGTGGGGATATGATTT
TCGCACCTCATACCAACAACTGAGTTTCATTAAAAAAGTAGTCCCTGATG
TTCCTTTACTGGCTCTAACAGCCACAGCGACTCCAAGGGTCCGCAAAGAC
ATATGTACTAACTTGAACTTGTATCGTCCACTAGAGAAGTGCACAAGTTT
TGACCGTGAAAATCTGTATTTGGAAGTTCAAAGAAAATCTAGTATTTATA
TGGACTTGAAACCTCTGTTGTCGAAGGATAGAAATGCTCAGATGAGGTTC
ACCGGCTCCACTATCATTTACTGTCCAACCAAGAAGAAAACAAGTGAAGT
CATGGACGTCCTGCTTTCTTTTGGTGTCAAATGTGCTATTTATCATGCTG
GTCTTGCTCTCACTACTCGTAAAGAATGTTACCGAAAATTCATGTCTGAT
GAAATTGATTGCATCATAGCCACCGTAGCGTTCGGAATGGGGATCGATAA
ACCAGACATCCGGACAGTCATTCATTACGGAGCTCCAAAAGATATCGAAA
GTTATTACCAAGAGATCGGACGAGCTGGACGAGATGGCAACCCAAGTAAT
TGCATCACTTTCTTCAATGCTGCAGATTTCGGACTAAGCAGACATTTTAT
TTCGGACATCCGTGATGAGACCTTTAAAACGTACAAAGTTGAGATGTTGG
CAAAGCTGGAGAAGTTTTTGACGACCACTGGATGTCGAAGGAAAActatt
ttgaaacattttgaaaacgtCGGATCGAGTTGCGGTGGGCATAAAGATTG
TTGTGATAATTGTCGAaagaaGGAGTTGAACAAGAAAAGCAAAGCAGTGG
GATCCAAAACACCAGtcaaagacaaagaagaagaagatgaataCGATGTT
GGCAAAGAATGCGTCAAACTCCTCGACGCTGTTAAGGCAACAGGCAACGG
TCGATTCGGAATCACAGTTCCTATCTTGCTTTTGAAAGCATCGACCAGTC
AAAAGATCTCTCATCTGAAGTATACAGACATGTACGGTGCTGGAAAggaT
AAAACTGAACGTTACTGGAAAGCACTTGggcGAGAAATTCTCATCAAAGG
TTTTTTGGAAGAACAACCAATTGCAAATAGTTTTGGATCAACTGTCAAAG
TTTCAGCAAAAGGTCAAAAATGGTTAACGCAACAATCGAAGAAAGCAGAA
CCAAAATTGATGCTATCAAATCCCTCACTTGATTTGGTTACAGAGATCAA
CGGACGTTTGGCTCCTGATAGAGCATCGCCTTATACTGCTGCTAAACTGA
CTGAAAGAATTCTTCGAAAACAACCAAGAGTAGCACCCTGGAAAAAACAC
GTGGCCTTAATGTCTTCAATTCTTCAAGGTGCTCAACGATGTGGGACACC
TTTCGATGGAGTAAGTCTTCAAAGAAGCGAAGGACCTGTGGAACGGCTTA
CGGAAACTCAATCTGCTTCTTATGTTTTGCACAAAGATGGTCAAACTTTG
GATGAGATCGCAAAAAGACGCGCCTTGGTCCATGACACGATTTACGGACA
TATATGTTCTGCCCTTTTGGCTGGATTTCCTGTTCATTTGAAATTAGTGG
ACTTGACTTTTGACGATGTTGCTCTTGTGGTGAAAACAATGAGTTCAGAA
AATATCTCATACAATATCAGTCAACTGCGACCCATCAAAGATAAACTACC
AGCATCTATCGGTTTTGGAAAACTAAAGTTCGTGTTGGCCATGTTGGAAG
TACATTTCGGAGTGGAAGGTGAAGATCCGCCTCAACAACCCAACCAGGAA
GCACTTCAAAATATCATTGACAGCGCTATGCAGGCCAGTCAAACAGTAAA
CAGCCAAAACTCTACCAGCAGCAATAACAATAATGGAGCTAAACGAAAAG
TTCCTGGATGGTTAGAAGCCAAGATGGGATCATCACAAAAAGCTTCTTAT
AAAAGATCGAGCTCCAAAAAACAAAGAAGTGGGTTTCTATGATGGTGAAG
GCGTTTATGAGATGAGATTGAGGAAATGAAAGGTAATTCACTCCATGTTC
GTTTATTATGGATTGCAAGTAACGCTGCCAAAAACTATTCGTTGCGTTGG
AATTACTTGAGTGCCTTTCTTGGCTTTCCATTCAACTTGCTATGTTTCGA
GAAGAGGTATTATGTTATGGCAACTAACAAGGACCCTCGATGATTCAAAA
ATAAAGACTTTCAATGAAAACATGGCCTTTCATGTGTTTATATTACAATA
CGTTGTATTTTGACGATCTTCGTATATGTGTACCATGTTTTTATTACGTC
ACCGTTAAACTTTATATTCCTACAGTGTAAGATGTTGTGAATAgtaattt
taaaaatctagggagg

Run BLAST on NCBI

transcript from alignment at scaffold_49:282082..295422-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00068843 ID=TCONS_00068843|Name=TCONS_00068843|organism=Clytia hemisphaerica|type=transcript|length=13341bp|location=Sequence derived from alignment at scaffold_49:282082..295422- (Clytia hemisphaerica)
TCTGGTTATCCCCCTTCAATCAATATAAAATTTGCGAACGATCGATACAA
TGTTTTTTTATAATCTTATAATATTCTTTTGTTAGGCATGGAGGAAATAA
CAAAATTGAAAAAAGAGTTGGTGCTATTGAATGAAGATATTGAGAATATA
TCAACAAAATGTGAAGAAAAGTTGCCTAAAGAAATATTTTCAGAGGCTGA
AAAGTTTACCTCTGCAGTCACATCCTTTAGAAATTCCTTGAAAATTTTCA
AGACTAAGATAAAGAGGGAGCAGGATGTTTTGATGGAGGAAGAGAATGAA
GAGAGTCCTGATGGACAAAGGCCATTGGAAATTGCTACCAAAGACATGAT
AAGCAATACACAACATGTAGAACTTACCAACAACAACAATAACAACACTG
ATGATGTCATTGCAAAGGATAAGAAGGAAGAAGAAGAGGATTTTTGGGGT
GATGATGATTTTGATGATGACGATTTGTTGAAAGTTGATGTTTCTAATGT
CTCAAACTCCGTCCATGGTATGTCAGGATTTGTCTTTTAGATGTCTTCTT
TTTCTTTCTTCCATATTAAAATCCTTTTCACTCAAAATAAAAAGGTCCTC
TCTACAAATAAAAGTTTTTCCATAAAATGACTAGTCTAGGAAATATCAAA
CTATTCACCTATTTAGTAGGGGAAAGATATCCTAAGGGTTTGCCTTCTAC
TAATTTGATTGTATTTATCACGATCATCAATCGTCATAAAAAAGAATTTT
TTTATAGAACAAGAACATCAAACAAATACCAGTTTGAAATCACCAGAATC
TGTCAGTACGCGGAATAATTCTGAAACCTCTACAACAGACAGTTTAAATG
ATGTTCAGCTGTGTGATTTGACTTCAAGTGAGTGTTTTGGTGCTTTCAAC
TTTTGTATAATAAAGTGCCTTTGAACAAAAGTTTTCGTGGAAAGTTTTTT
AAAAAATAATTTATATGAATTTATTCCTGTAGAGATTTTAAGAACGAAGA
ATTCTTCCACCGTCCCCCATATTTTCAACAATTATTTTAGGATATATGAT
AAGATTCATTTTGGTTTTATCTTTTTTAGTTGCCCAACCAACAAGTGAGC
ACTTGGATGTTTTGAAAGCTACCTTCGGGTTTTCAAATTTTCGTTCGTAA
GTAAAAGAATATCAAAATATTGTATTGACATCCTCTTTTGGCCAGATTTA
GACAATATGCGCTGCAGTGGAGACATTTTAAATCGAAAATCTTGTACGAA
TAAAATAAAATTGTGGACAATTTAATTTGCATTTGTTTTCTTTATAGGAC
ACAATGGGAGATTATCAGAGCAGTGATCGAAGATAGAAAAGATGTCTGTC
TTGTGATGGCTACAGGTAAAAACTGCTGATTCTACTGCTAATATCTTTAT
CTAATCATCAAGAATCTCAATATGTTCAAGTTATCTATTTTCCTCAATAA
AATAGGTGCTGGTAAAAGTTTGTGCTACCAATTCCCTCCAGTATTCAAGA
AAGGAGTATGTGTTGTGGTCTGTCCTCTCATCTCTCTTATGGAAGATCAA
GTTCATGCACTGAAGTGAGTGTTTACTGTGTCCTTCTCAAATCTCTACCC
CCCCCTATTTGTCATAATTATCTTAAAACTCGTTATGCTTACAGTAAAAT
GTCTTTCCTTCTAAGACCTTCGTTGACTTATTATGACAATTTACTAATTG
TGCATAATATTTTGCACAGCTATGGAAGCTATGAGAATGTTAAATTGACA
ATCAAACTTATTTTTTTTCAGCCTTTAAAACCTCGTAAAAAAGGTTTGGT
TCATAGTAAAGAAATTGTTTTAAAGAGTTTGGCAAAGACATTTTCAACAA
GACTGTCTGTTATCATTTTCAGTCCTTTCCTTTCCATGTTCTCGATTTTA
TCAACCGAATTTTGTTTTTTAGTTCATCGAATATCCCTGCTGGTTACTTA
GGAAGTGCACAAACCAACTCTGCCACCATCAAGAACGATGTGTTGAGAGG
ANAGGAAGTGCACAAACCAACTCTGCCACCATCAAGAACGATGTATTGAG
AGGAAAATTGAACCTGGTTTACGTCACGCCTGAATACCTTTGCGCATCTC
AAAATTTCCTCAAGGAGTTGAGTGAAAAGACCAATTTAGTTTGCGTTGCA
GTCGACGAAGCACATTGTGTCTCGCAGTGGGGATATGATTTTCGCACCTC
ATACCAACAACTGAGTTTCATTAAAAAAGTAGTCCCTGATGTTCCTTTAC
TGGCTCTAACAGCCACAGCGACTCCAAGGGTCCGCAAAGACATATGTACT
AACTTGAACTTGTATCGTCCACTAGAGAAGTGCACAAGTTTTGACCGTGA
AAATCTGTATTTGGAAGTTCAAAGAAAATCTAGTATTTATATGGACTTGA
AACCTCTGTTGTCGAAGGATAGAAATGCTCAGATGAGGTTCACCGGCTCC
ACTATCATTTACTGTCCAACCAAGAAGAAAACAAGTGAAGTCATGGACGT
CCTGCTTTCTTTTGGTGTCAAATGTGCTATTTATCATGCTGGTCTTGCTC
TCACTACTCGTAAAGAATGTTACCGAAAATTCATGTCTGATGAAATTGAT
GTAAGAAAGCTTTTCTTTGTTGTGTTCATTGGTAAGTTTGTTCTCTACAG
TCTTGGTATAGTCAAATTCATAGATTTATTTTGAAATTTGACATTGCATA
GTTCAAGTTTTATTCATGCCTTACGGCAATCATCAGATGTACAAATAAAA
CATTTTAAAGAAGCATTAAAAAAAACTGTTAATATGTACAGATTCAGAAG
AGTAGAAAATTAATTAAAAGTAATCGCTTAAAAGTTCTCTTTCTATAATT
TTAGTGCATCATAGCCACCGTAGCGTTCGGAATGGGGATCGATAAACCAG
ACATCCGGACAGTCATTCATTACGGAGCTCCAAAAGATATCGAAAGTTAT
TACCAAGAGATCGGACGAGCTGGACGAGATGGCAACCCAAGTAATTGCAT
CACTTTCTTCAATGCTGCAGATTTCGGACTAAGCAGGTTTGATTTTGATC
TTTTTTTGGAAAATAAATAATCTCTCACCGTGACACCTTTCAAAAATTTC
TTCAAAAAGTGAGAATACCAAAAAAAGAGGGGGATACCTTTGGAAGAGGG
GAGTCGCCATCATAAATCCTAATTCTACTGAATAGAGATTTCCTATTATT
AAATATGTATTTTTAAACAAATCAAAATGTTAAAAAACTTAAAGGGATTT
TTTGTACCGGAGTCACTTAAAGCGATTCCAGTATTTGTCATGGCATAGCT
ATCATGAAAAGCATTTGGAAAATTCAAGTCAAAGTTGTTAATCAGTGATT
CTATCCCAAGATATTAACATCCATAGTTCCAAATTCAAGACATCTGCACT
CTGTGGAAGCCATATAAAAATGAGAAATTTTGAATTTGGAAAACTTCTGT
TCATACCAGCTAGTCATCAAACTAAAATAATTGAGAGTAGGCTAGAAGGA
TACCTGTAGTTGAACTAAATAATTTTAGTATGATTGACCACTAGGCAGAT
GACATTTAGAGGATTTGTATACCATAAAAAGTCATTTAATTTTTGATCCA
GTCCTCTAGTCTTTAACTAATATGGATTGACGATACCAGAAAGTTTGAAA
TCAAACTTTGAAATTATCATTTCAATATGGCTTCCATAGAGCGCAGATGT
CCTGAATTTGGAACTTTGGATGTCAATATCTTAGAATAGAATCACTGTTG
ACAACTTTGACTTTAATTTTTCAAATGCTTTTTATTATAGCTATTCTTGG
ATTAAGTTTTATTTTTTATGCAGGAATCCCTTTAAGAAGGGATAGGATCA
GATGGAGAAGGCTTAGTTGATATTAGTTACAAAATCTTGTCTTTATTCTA
GACATTTTATTTCGGACATCCGTGATGAGACCTTTAAAACGTACAAAGTT
GAGATGTTGGCAAAGCTGGAGAAGTTTTTGACGACCACTGGATGTCGAAG
GAAAACTATTTTGAAACATTTTGAAAACGTCGGATCGAGTTGCGGTGGGC
ATAAAGATTGTTGTGATAATTGTCGAAAGAAGTAAGTATTAAGTTATGAG
AATCTTTCAAATGTTAGCTAAAACATTTCCTTAGAGGGTATCTGAAAAAG
TTTAGTGTTTACTTTCGTCGGATTAAGCGTTTTGAATATTTTGAATATTT
CACGGGGATTTAACTTCGCGAGTCAGCAATCTCTCGCGAGTTTTATTTTC
GTGAAAACGCGAAATTAAATCTCGCGAAAATTAATCTGGTTTTAGTACTT
TTGATGGTTGATAATGCTTTTGTTCTATTTATTCGCAGGGAGTTGAACAA
GAAAAGCAAAGCAGTGGGATCCAAAACACCAGTCAAAGACAAAGAAGAAG
AAGATGAATACGATGTTGGCAAAGAATGCGTCAAACTCCTCGACGCTGTT
AAGGTTACATTTCCTATTCAACCTTGTCAAAAATACCAAAAATACCACTT
CTTACGTTGACCAAACTTCTCACACAAGAAAATGCAGTCAATCGTCTGAG
TACATCATATTTCAAAACAATGATATTTTTGATTGCTTAAAGGCTTGGGC
ACACGAGAAGTGTTTTTTTGCGTTGGGTGCAATGCAACATACTCCATCCC
ACCAACACAAGAATAAAAGTGCGTGTCTCATGGTTTCTTTTTTTACCCAA
AAGACACACTAATTTTGTCCCTGGGACAATGGAGTAATTTTAATTCGAAT
CAATTTTGCTTCACTGTCCCAGGGACAAAAGCGAGAGAAGCACAAATGCA
TTAAAAGCCAAAAACTGTAACTTAAATATCTCGACTTTGGAAGATAGTTA
GGCAAAAATATTTTGAGATTTTGCTCAGGACAATAGAACGATCCCACGTG
CCAAATATTACAAACCATCTGATTATCCCTTTAAAGTTTTTAATCGCGCG
GGTCGTGGGGGACGGAGAAAGTGGTTCTTCCTTTTTTGTTTAAAAGTGCT
ATGTAAGCAAATGGTAGAAGATTAAATATTACGTTAAAGAATATTCTTTA
AATAGTCCCGTTGTAACTCTGAAACATTGTTTTTGATCTCATTTCAGGCA
ACAGGCAACGGTCGATTCGGAATCACAGTTCCTATCTTGCTTTTGAAAGC
ATCGGTGAGTTAGAATCAATCATTTGTCGTTTTCCATGTTTTTAAATTAA
CAAAATTCTGCGCTTCCTAATAAGATTTGTACATGTGGTTCCTCAGGATA
GCAGATACACAAAGGTCAAAAGAGCATGTATATTGTCAAGGAAATAACCA
TATTATTTTCTTACTTTTCGTTGTACTACTGTTCATGAGATAACTCTTTA
TCAAGAACTTACTCAAAGAGATTCCAAAGTCCCTTCATGTTTTCTAGCAA
TCCGCAAACGAGCTTCATTCATGTTTTATTTCTTAATTACAGACCAGTCA
AAAGATCTCTCATCTGAAGTATACAGACATGTACGGTGCTGGAAAGTAAG
GGAGCATTTTCCTTTCAAGTTTAACTGCTATAACTAATGCACCCAGCGGT
TTGCGTGAATGCGTGAATGCGTGAATGCGTGAATACGGGAAAATTAAACT
TTAAAAAAAGCTTTGCGTGAATGCGTGAATGCGTGAATACGGGAAAATTA
AACTTTAAAAAAAGCTTTGCGTGGACAGAAATTCCGTGAATTTCGAAAAA
AACATTGCGTGAATGCCTGAATTAAAAAAAAAATTGTGTGATTGCGCATG
AATTGAAGGGTCCGCTGGGGGCCTCTTTTACTCTTTAAGAACATCAAAAA
AACGTTCGAAATTTAACATCAATTTTCTTTTTCAGGGATAAAACTGAACG
TTACTGGAAAGCACTTGGTATGTTATTATAAAAAATCAGAAAATTTAATT
ATTCCAAAACTCTAACAAATTTCTTACTCATTGCAAGACCTAAAACCTTT
CAGAATCCGAATAAATTCTCTCAAGGGACCACAAATTTTACTCAAAAACG
GTTGTTTTCGAAATAAAGTAGGATTAAGCATTTTATTTCAATTGACCCTT
TACAAGCTCGTAGTGAAGTTTACGCCATTCTTCAACCTCCTTCTTGCATT
AGTAAAGTATTTGTTTTCATTTTCAGGGCGAGAAATTCTCATCAAAGGTT
TTTTGGAAGAACAACCAATTGCAAATAGTTTTGGATCAACTGTCAAAGTT
TCAGGTTCACACTTTTTTTGACTCATTTTTTCCACTACTCAGAACTATTT
GAGCGGCTCTTTTGTATGAATCTTTAAAAGATTCTATCGTCCGTTAGAGG
GATTGTAAACACCTCCACCACTGCTTACGCTGCCCCGGCTAACCACCTTT
TTCAAATTTATCCCACCTCCTAAACTATTCCCATTTTTAGTGATCTTGTG
TAAACGATATGATCGTCTAATGAATCTTTTGTTTTTCAGCAAAAGGTCAA
AAATGGTTAACGCAACAATCGAAGAAAGCAGAACCAAAATTGATGCTATC
AAATCCCTCACTTGTAACTTTTCTTCTGTTCAAATGAATTTTAACGCTTA
TCTGATATCATCTCTCTTACATGCATGCAAAGTCTTGATAAGTGGGAGTT
TCGGGGGTGCCTGTATCTTTATATTTGCACATTAAGTGGAATGCAAATCT
TCATAAAGAATTTCTCCCGGACTTAATTGCTACTATAAAATCTTTCTCAT
GAAAACAAGAAATTAGTTGATATTTTTCTTCATTTATTTCTCTGCAGGAT
TTGGTTACAGAGATCAACGGACGTTTGGCTCCTGATAGAGCATCGCCTTA
TACTGCTGCTAAACTGACTGAAAGGTACCAATCGTTTAGTATCAATCGTC
AGACTATAGATTAAGGTTGACCATTCTTTTCTACCAATAGACGATATCGG
ATTTAGATAAATGCAATGCATTCTGGTTTCTAGGGACTCTCAAAGGAATT
ATAATAGATCAATTATAATAGATTATAATTCCTTTGAGAGTCCCTAGAAA
CCAGAATGCATTGCATTTATCTAAATCCGATATCGTCTATTGTTACACAT
TATAAATTTGTTGATAAAAGAACTTTCACTTTTTGTTTAGAATTCTTCGA
AAACAACCAAGAGTAGCACCCTGGAAAAAACACGTGGCCTTAATGTCTTC
AATTCTTCAAGGTGCTCAACGATGTGGGACACCTTTCGTAAGATAAACGC
TTTGATGGTGTTTTATTCTTCGTTTTATTCTTAAAGTATTTATTCAGTAT
AGTCCATGTTAGCAAACAACTCATTCGGCTACTCAGCGGTTGCAAAGAAT
TCCGAGGCAATGTTTATTATGTGGGTTTCTCAAATCCCCAGCTGTGACAA
AATTAGCGAATAGATCCTGGGAATAAGTTTGGTTTTTTGATCTCACTATC
ATGTAATCGGGACCCATTGACTTAGTGTTGAAGGAGGTAAAAGAACAGAC
TACGTCTGTCCCGACTTCCTTCATATCCGACTCTGCTGACAGCTAGCAAA
CGCACGCGCTCACATATACTGTTAACTCCTTTTAAGGATGGAGTAAGTCT
TCAAAGAAGCGAAGGACCTGTGGAACGGCTTACGGAAACTCAATCTGCTT
CTTATGTTTTGCACAAAGATGGTCAAACTTTGGTAAGATTGTTTTAGCAC
AGTTGACGCTCTCTAATTTGATTTTCAAGGTGATTGGATTTTCATCGAAT
AAGGGAGCGTATCGCTTATTGGTAGACAGTCTTATGGTAGACAGTCGTTC
ATTGGAGCTTCTTGTTGACGGTGACTTTCAATACTATCGAATAATGAAGC
GTATCGAATGGTAGAACGTCGTCAACTGTAATTTCTTTTCGATACAAATA
AATCAACCGAATGCAACGCGTGAGGTGGTGAATGTAGCCAATCATAATTG
TTGTGGTCTATTTATCTTCATTGTATTTGTGTTTTAGGATGAGATCGCAA
AAAGACGCGCCTTGGTCCATGACACGATTTACGGACATATATGTTCTGCC
CTTTTGGCTGGATTTCCTGTTCATTTGAAATTAGGTTTGTTTAAACTGAG
CTCATTTTATTGTTGCATTAGAAAAGATAATTTTCGAAAATTGAGCCAAA
ATCAATTTTATCTTTTTCCTTCAAAAACTATAGAAATCCATGTTTTTAAT
GGCGACTGATGAAAAGAATTTTCCCTTCTTCTCTTAGTGGACTTGACTTT
TGACGATGTTGCTCTTGTGGTGAAAACAATGAGTTCAGAAAATATCTCAT
ACAGTAAGTTGTGTTTTGATATTTGAATGTTAATGTGCTCTTCATAAAAA
ATGTGGCACATGGGGGGTGGAGGATATATGGATATATTATTCAGAGGGTT
GTGAAAAAACAACAAACTTTGCCTTGTCCGGGGGTAAACTTACTCTGTTT
GGGGGTAATTTTGCTATGTTTGAAAAGGTTTGCTGTCTAGGTGGAGGTTC
AAAAGTTACAATATTCGGGGAGTCAATTTCCAAAAAATGTTATATCCTCC
ACACCCCATATTCAAGTTTTTTGTGGAAAAGCCCAATATCTCGATGTGAC
CATTCCCCATGACAACCTTATTCATTCTCGAAAATTCTTTTAAAAGACTA
TTAAAATCTATTTAGATATCAGTCAACTGCGACCCATCAAAGATAAACTA
CCAGCATCTATCGGTTTTGGAAAACTAAAGTTCGTGTTGGCCATGTTGGA
AGTACATTTCGGAGTGGAAGGTGAAGATCCGCCTCAACAACCCAACCAGG
AAGCACTTCAAAATATCATTGACAGCGCTATGCAGGTGAGGGCCGTAAAC
TACATCTTAGGAATGGTAGCTTTCCGACATTTTTATTCTAAAATATCTCT
CTAATGCTGACCAATATCTTTTCAACTTTTAATCACAGGCCAGTCAAACA
GTAAACAGCCAAAACTCTACCAGCAGCAATAACAATAATGGAGCTAAACG
AAAAGTTCCTGGATGGTTAGAAGCCAAGATGGGATCATCACAAAAAGCTT
CTTATAAAAGATCGAGCTCCAAAAAACAAAGAAGTGGGTTTCTATGATGG
TGAAGGCGTTTATGAGATGAGATTGAGGAAATGAAAGGTGAGAGTTTTTT
TTTCAACTCTAAAATTGGCGTACTAGTGTAGTGGTTATAGGTTATAAACC
TTGATTTCCGTCTGTGAGGTCAGGGTTCGATTCTCACTCGGTACTATAAT
TCACTTGGCAAGTGAATGTACCTTCGCCCGGGTCGACCCATGTCTTGCGA
GGGAAACTCATAGGTTCACTTCTCACTTCTCTCACTTCTCTCTAAAATTT
TCGAGGTTTTCCAAGGTTTTGAAGGAAGATTCTAATTATGTGTTATGATC
TCCATTGAAAGATTCGAAATATGTTACCCTCTCCACCTTATTTACATTTC
TAAGTGACTTCAAAAAGGATTAAGTGAGACCACTTATTAAGGAGATGTTT
TCTCTATCTGGGTGGATTGCAAAATCGTAGAGTGATAATATGTTTTGAAA
TGGACTATAAAAAACCTCAGATATTTTTAGGTAAACATTCAGTTCAATCA
CGGAAGACTTGTAGATTTTGAGAGCTTGTTTGTTTGAGTCCCACTACGTT
TCTATGTGACAAGATCTTCGTCATTGATATCATTTTAACGAAGATGAAAA
AACGTGTTTGTTTGTTTTATGTTTGGATGTCTATCGCAGAAGTATAAAAT
CGAAAATCTATTTTTACGTCAGTTTTCTACGGGATTTTCAATTAACGCCT
TTTACATATTTGCGTATAAAACAAATTCTGTTATGAACTGATGTCTAAGA
TTTTATTACAAAAAGTAAAATACCCTTAATCTCCTTTGTGTAAGATTATG
TAAGTTTTTTTTTGGAACACCCGGTAAATTGCCTTTATTGTTATTAAATA
TGAAGTCTTAAATTTATTTTTGAAACTTCTAGAACGAAGTTTTGCCATTT
TATGAGCTTTACATTTAATTTATTAAAGGAAGAAATTTTGGCGGAAAGAA
AATTTGGCGGATTTGGCGGATTTGGCCAGAATCCGCCAAATTAAGTTCCC
GCCAAAATTTCTTTTTTCCGCCATCCGCCAAATTAAATTCCCGCCAAATT
AAACTTTTTGAAAATATGATCTCTTCTGAGGTGTTTTTGCATTTTTTTGC
TGTTTTTACGCCATTTTAAGGATACATTTTTCAGCCAACGCCAAATTAAA
TTCCCGCCAAATTTATTTTTTTCGTCCATCCGCCAAATTAAATTCCCTCT
AAAAAACTTTTTCGGCCATCCGCCAAATTAAATTCCCGCCTAAATTTCTT
CCTTTAAGGTAGTTTAAATATTTGAAAATTCTGAAATAAATTTTACAAAA
GTTTCACCAAAAATTCTTATTTACACTAAATTTTATCGACTATTAATCAA
AGCTATTTATTGCCCTGAATGTGGTTTAAAATTAAACACAGGAAGTTTTG
GTTCAATGTCATGAAACACTCGAAACAAATTTTTGTTTATTTCAAACAGT
TTTTACTTTTGTTATGGAAAACTGTTGAACCTCGAGTCAAGTTTATTTGA
CTTACATGATTTATTTAAGGATCTAAAATTGTTTTCTAAGCAAAGCCTTA
GATTTTCATCAAATTCCTTTGTAGATTTTTCTGCTACATCACCGTAAAAA
ATGTTTTCGATGTTTTCCACTTATAACTAAAAAATCTTTAAATAACCCAA
ATACAATATATTTTGTACAGCCCAACCCTTATTGCGTTTCCAGCACCAAT
TTTGGTCCACGAAAAATGGAAGAAATTTTCCTGCGCACAGACTTCTTTTC
GGCTCGTTTGAATCTGGATTGTTCTCGAGGAGGTTCGGGGCTTCGGGGGG
ACGCGAGATCTGTTTCTATATGTTCGGGAGTCATGGTCAAGCCAGTGGTT
TTGCGTCGCTCTTTGCGGGGTCGTGGACTTTTAATGGGGACGCCAGAGCC
TGCAGAGTATGAAGACAACCTGCTGAAACTGCTGGTAATTTTACTGGAAG
GTGAAATCAAATCAGTTAGTTTGTCATCCTCTACATCGTGAGGTTCAATG
TCTTCCTTGTTCTCTGAATCAACTCCCTCANCTCTACATCGTGAGGTTCA
ATGTCTTCCTTGTTTTCTGAATCAACTCCCTCGCAATGGTGTTCTTTTTC
TAAACTTTTGAGGTCAGTGAGACTGTGACATCTTTGTAAATTACTTTTCT
TTTGTTCTATTTCTTCGTGTCCAACTCCATTCATTTCTGTTAATTTCATT
TCTTTAAGTTCCTTCAGTTCTTTTGATTCTTTCGATTTCTCCTTTCGTTT
TTTGTCCTTCTTTGACCAACTACTTGTCCGAATTGGTTCGTCATTGTCTG
TGCTCAGACTCATAGTATCTGGTGAATTACTATTTGTATTGTTATTGGAG
TCAAAGTTGTCGTTATCCAAAGAAGTCCTTCCCATTGAGATCTTCTTTAG
ACTTTCACTTTTTAGTTGGTTTAACTTCAAATCTAATTTCTTGCGATCTT
TAAACGATTTTCGTTTCTCGCTTGAAAAGTCGAAAGGATTCATGGGAATT
TTGAATGGTGTAGATGGTTGTAAGCCACCTTCATCGCTTTCAATCGATTG
ATTCGAAATTAATTCGTTTCTGATGTTTTCATCGAGACCTTTCACATGTG
ATCCAGGAGAAACCAGTCCCCCTTTTACAGTTTTCAATGTCAAATTATTC
AAATAAGCTTCAACAACCATGGAGTTTAAAGGTGCATGAGTTGAATGAAA
ATCATCAGAAGCGGAGACTTCCCAGAAATTCGCGCCATGTTTATTCGCCA
ATTCTTTAGCTTCTCTCAAGGAAACTTCCCGCAGATGGTTTAAGTCTTTC
TTGTTACCAATAAGGCCGATACTTTTTGGTCCATTTTGTTTGTAATTTTT
ACTGTTGTAAATGAAGTTGATTTCTTCGAGGAGTGCAGATGCAACATTGA
AACTGTTCTTGTCTGAGATGGAGTAAATCACTGCGACACACGACGCCCAG
TGGATCAAATTATTGTTATTCTCGACCTGGAAAAAAGGAAAGGATTTAAA
ATGTTGGATTAGCGGGTCTTTGGTAGGCTACGTCATCTTCCTTCGTTTCG
AGTGTAAAACTTCTCCTAAGGTAAACAAGGCCTAAAAGCCTGGAGCTGTC
TATTGTGCAGACTAGTCTTTGGTAATTGAAAATTAACTTCATTTCAAAAC
CATACAAAATCAAAAAACCTAAACCACTCTGATTCATAAAGTTCAAGGGC
GGAGATTCTTTTATCTTCTAATCTGACTCATGCTCATTACCAGACTTCTT
TGTGTCCATAATTTGTTTTACTAAGAAGCTTGTAAACGTTCTTTAACTCT
CATTTAATCGTTTGATAAAAGTCTCATTCTCTTTTAAATCAGAAGTGGGA
AGTCACTTAAATACTTCCAGTTTCAACACGACAAAAAATTGGATAGAAAA
TTATTTTGATAAAACATTTATATTCAATACACAGGTTGCAAAATTATATC
GGTGCAGTCAAAACATGTGATTACTCGAAAAAGTTCCCGTGATTTTATTC
CCATGTTGCTTGCTTTACAACTTTTAATTACAACAGTTAATTACTTTATT
AGTGTCAATAAATTCGAACCAATCAGAAATAAATGTCATGTAACAAGCAC
ATGGAAATTTCGAGTAAAAGCGTGATTTGTCTTCAGAATTTTAATTTTGC
AACCTGTGTATTACTCCATCAAAGTCTTACCGTTCCTGATGAATCCCTTA
ACACATATTCAATGACTTCATTTCCAAACTCCAGGTTTCTACGATAAGTA
TGTTCCACGCTTCTCTGGTATTCGTGGATGAATCTTCGCGTCAGAAATCG
AACACTGATTGCTAAAAAAGAAAATTTTCATTTTTTGACAGGGAGAAGGA
ATATGCCCCGGAAATATTAATCAATGAATCCTATAAGCCTGATTTATCAG
AACGGTTAGCTAGGCCTTGATGATACCCTACAACTTTAACCTTTTCTTTT
ACAGTAGGTAATTCACTCCATGTTCGTTTATTATGGATTGCAAGTAACGC
TGCCAAAAACTATTCGTTGCGTTGGAATTACTTGAGTGCCTTTCTTGGCT
TTCCATTCAACTTGCTATGTTTCGAGAAGAGGTATTATGTTATGGCAACT
AACAAGGACCCTCGATGATTCAAAAATAAAGACTTTCAATGAAAACATGG
CCTTTCATGTGTTTATATTACAATACGTTGTATTTTGACGATCTTCGTAT
ATGTGTACCATGTTTTTATTACGTCACCGTTAAACTTTATATTCCTACAG
TGTAAGATGTTGTGAATAGTAATTTTAAAAATCTAGGGAGG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_042915	XLOC_042915	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_49	supercontig	scaffold_49:282082..295422 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.49377e-10	0	3.5405e-09	0.662391	1.43894	1.22648	0	0.52296	0.572135	0.5017	4.55396e-07	0.267211	0.230791	0	0.348778	0.512714	6.37987e-08	0.628703	1.00647e-05	0.46635	0	3.35404e-09	1.01866	1.12031	1.11534e-07	5.92772e-10	0	0.624669	0.000333544	1.07e-06

Blast

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BLAST of TCONS_00068843 vs. Swiss-Prot (Human)
Match: WRN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 403.675 bits (1036), Expect = 2.988e-140
Identity = 207/463 (44.71%), Postives = 298/463 (64.36%), Query Frame = 3

Query:  963 GSAQTNSATIKNDVLRGKLNLVYVTPEYLCASQNFLKELSEKTNLVCVAVDEAHCVSQWGYDFRTSYQQLSFIKKVVPDVPLLALTATATPRVRKDICTNLNLYRPLEKCTSFDRENLYLEVQRKS-SIYMDLKPLLSKDRNAQMRFTGSTIIYCPTKKKTSEVMDVLLSFGVKCAIYHAGLALTTRKECYRKFMSDEIDCIIATVAFGMGIDKPDIRTVIHYGAPKDIESYYQEIGRAGRDGNPSNCITFFNAADFGLSRHFISDIRDETFKTYKVEMLAKLEKFLTTTGCRRKTILKHFEN---VGSSCG--GHKDCCDNCRKKELNKKSKAVGSKTPVXXXXXXXXXXXXXXCVKLLDAVKATGNGRFGITVPILLLKASTSQKIS-HLKYTDMYGAGKDKTERYWKALGREILIKGFLEEQPIANSFGSTVKVSAKGQKWLTQQSKKAEPKLMLSNPSL 2330
            GSAQ  S  +  D+  GK  +VYVTPEY   +   L++L     +  +AVDEAHC+S+WG+DFR S+++L  +K  +P VP++ALTATA+  +R+DI   LNL  P   CT FDR NLYLEV+RK+ +I  DL+P L K  ++   F G TIIYCP++K T +V   L    + C  YHAG++ +TRK+ + +F+ DEI C+IAT+AFGMGI+K DIR VIHYGAPKD+ESYYQEIGRAGRDG  S+C   +  AD  L+RH +++IR+E F+ YK++M+AK+EK+L ++ CRR+ IL HFE+     +S G  G + CCDNCR +  +  S      T          +D G +  KLL AV   G  +FGI +PIL L+ S SQ+++   +   ++G GKD+TE +WKA  R+++ +GFL E    N F     ++ KG+ WL + + +++  ++ +N  L
Sbjct:  620 GSAQ--SENVLTDIKLGKYRIVYVTPEYCSGNMGLLQQLEADIGITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLRNPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVK-TSSHWEFEGPTIIYCPSRKMTQQVTGELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLLTEIRNEKFRLYKLKMMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCRSRLDHCYSMDDSEDT---------SWDFGPQAFKLLSAVDILGE-KFGIGLPILFLRGSNSQRLADQYRRHSLFGTGKDQTESWWKAFSRQLITEGFLVEVSRYNKFMKICALTKKGRNWLHKANTESQSLILQANEEL 1069

HSP 2 Score: 116.316 bits (290), Expect = 2.988e-140
Identity = 51/93 (54.84%), Postives = 68/93 (73.12%), Query Frame = 1

Query:  646 PTSEHLDVLKATFGFSNFRSTQWEIIRAVIEDRKDVCLVMATGAGKSLCYQFPPVFKKGVCVVVCPLISLMEDQVHALNSSNIPAGYLGSAQT 924
            P  E +  LK  FG S+F+  QW++I +V+E+R+D   VMATG GKSLC+Q+PPV+   + +V+ PLISLMEDQV  L  SNIPA +LGSAQ+
Sbjct:  532 PNEEQVTCLKMYFGHSSFKPVQWKVIHSVLEERRDNVAVMATGYGKSLCFQYPPVYVGKIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQS 624

The following BLAST results are available for this feature:

BLAST of TCONS_00068843 vs. Swiss-Prot (Human)

BLAST of TCONS_00068843 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
WRN	2.988e-140	44.71	Werner syndrome ATP-dependent helicase OS=Homo sap...	[more]

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TCONS_00068843 (transcript) - C. hemisphaerica