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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069099 ID=TCONS_00069099|Name=TCONS_00069099|organism=Clytia hemisphaerica|type=transcript|length=769bp
TTAGCTATCATAATTACTAAAAATAATGCCTTCAAAGAAAAGCAAGCAGA
ACAAGCCCAATGGATTTGTTCTTTATgcaaatgaaatcaaaaaccaATTG
TTGAAGGAAGGTCATTCGATTCGTAACATGCCTGATTTGATTGCTGCTGC
TACCCCTAAATGGCAGCAACTTCCGGATGACGAGAGGGAATATTACAAAG
AGAAAGCTAAATGGGAGTGGGATAATCGTCACACTACTGGCAAATTTCAA
TCTAGATCAAGGAATCATTTTGATAACACAGGTGCCCCCGTTACTGAACG
TGTGGATCTGGTAAGGGTTATGGAAGTGAAACGCGAAAAGGAGCGACAAG
AAGTTTTCATGAGTTTTCTACCAGAAAGAGGCGTCTTGGACCAAAAGTTT
TACTTCGTATCTTTCATCTGTCTTCTGGAGGAACCGAAATTTCAACCCAT
AGAAGTTGCAGCGACCGAATTCAGTTTGTTGGGTGGTCGCGAACGAAGTT
TCCACAGACATTTAAATCCAGGACCAATTCCTCAAGGTTACCGTTTCAAG
GCACAACAACACAGTGATCTTACCCACAAACTTCCACTGACCGGAAAGAT
GCAGCTGGGAGATGATTACACCAAAATCTATGAcgaactttttcattttt
tatcgaaAGGAGGCCGACATATCCCTCCTATACACGTGAAGGtactaact
gaaaaaaaaatttattggtaAAGAGAGAGATCAAATGTTTAAgtacattt
tttagttttttatcgAGAG Run BLAST on NCBI protein sequence of TCONS_00069099-protein >TCONS_00069099-protein ID=TCONS_00069099-protein|Name=TCONS_00069099-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
MPSKKSKQNKPNGFVLYANEIKNQLLKEGHSIRNMPDLIAAATPKWQQLP
DDEREYYKEKAKWEWDNRHTTGKFQSRSRNHFDNTGAPVTERVDLVRVME
VKREKERQEVFMSFLPERGVLDQKFYFVSFICLLEEPKFQPIEVAATEFS
LLGGRERSFHRHLNPGPIPQGYRFKAQQHSDLTHKLPLTGKMQLGDDYTK
IYDELFHFLSKGGRHIPPIHVKVLTEKKIYW Run BLAST on NCBI transcript from alignment at scaffold_493:161518..169397- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069099 ID=TCONS_00069099|Name=TCONS_00069099|organism=Clytia hemisphaerica|type=transcript|length=7880bp|location=Sequence derived from alignment at scaffold_493:161518..169397- (Clytia hemisphaerica)
TTAGCTATCATAATTACTAAAAATAATGCCTTCAAAGAAAAGCAAGCAGA
ACAAGCCCAATGGATTTGTTCTTTATGCAAATGAAATCAAAAACCAATTG
TTGAAGGAAGGTCATTCGATTCGTAACATGCCTGATTTGATTGCTGCTGC
TACCCCTAAATGGCAGGTATGTTCTTTTTTACCTCTTATCACTTTATTTA
AAAAAGGGAAGAAAATTCACATTCTTCAAGTCGTTGGGCATGATGTCAGA
AGTGGGGAAACAGAACACTTTTTAAAAATTAATTGTGTATTTTAGTACAC
AAAACCTTTTAGTGAGTTAAACCATTCATAGTGCTTGATAGCCCTTACAG
GTAAAGGGACCTCAAAATGCAGTGGGACCTCAGGATGTCAGGTTTTGAAT
TAAGTTGAATGGAACTCAAACTTTTCTATTTAAACTAAAAATGACAAACA
ATATGAATAAAGGGTATAATATTACATAGTAAAAACAAATTGTATTACTT
GCTACCCTAAAGGAGCATCCTAAATGAATAAAAAGTCAAAAAAGTTTCAA
AGACTTCAACAAAATTTTTGGAATTAATTTTGAATTCTGCAACTCCTTCT
AAAAATAAGTTTGTAAAGCGTTATGAAAAATGTTCTTTTAGGACTCTAGA
AACATGGTAAAAAAGATGGTTTCTCAAAGTTATTACAATTTCATTTAAAT
AGACTCCAAAACCACCTAGCGTTTTGAGGTGCCAAACCTAGCGTTTTGAG
GTACAAAACAAAAACGCAAAATCTTCTCTTGAATCTCCTTTGAAATTGTA
ACAAATAACTCTAAATAACTATATAATGAATAAAGAACTATAAATGAATA
AAGAATATGAACATTTTTGAAATTTTAACAATACATTTAAAAAGGGACTG
CAGAATGCTAGGTAGTTTTCTTGAAAAAAATCAGTCANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTATCAT
TTTCTGGCAGCTTTCCCCTCGCCCAGCATATGCTAAACCATTTGGAGTAC
CATCTACTCCATAGTTTACAAACTGGGGAGTTTCATCATGATTGAAAACT
CTTGTTGTATCAATATGCCCCTGCCAAACACCAGTTTCTAATTGGACTGC
ATCAACAAAAATATCAGTTTTTATAAGCTCTTCAGCTAATTCATTCAAAT
GGTTACAAGCCATTTCTCTTGTGCAATTTAAAGCTCGATTTATTGATACA
GTCCCTTGTCTTTTCTTTGTGATCTGCTTTTGATACTTTGAATCCCAACG
CCTCCAAAAAGATTTGCTAAGCTTTTTTGTTGTGAGTGCTCGTAGTGCAT
TTGGGGATAGTTTCTTGATGTTACGTCCGCGAAGGTTTTTGTAGGCATGC
TTTCTTACTTCCAGAACATTGAGCATTGTCCTTGTCAACTCTGTTTTGTT
CAGTCCTTGGAGGCATCTAAAATATATGAAGTTTAATTATAGAGGATTTC
AATGTTTCTTGGAACAAGAAGAGGAACTACAGGAACTTAGGAAAGATTTT
CCTTAATTCAGCAGAAATGAAGAGAAAAAGGGATAACTTTCCAAGTCCAG
TGTATGTTGACGTTTCGTTTTACATTTAATTATTTCCAAGCTTTAAGAAA
TATTGCCAATATTGAATCTTACCTATTTTTGTTCTTTATATATTGAACTA
GCGACTCTTCTTCCTCTGTGGTGAATATTGAGCAATACTCCTTCTCTTTT
CCAGTCTCAATGATACCATCAAGCCGTGCATTTATTGTTCTTAGATCTTT
GACTAGTGGAAATTTTCCTGAATTAACTGCAGCCCAGCCACGTTTTTTGT
TAACTCTACACCATTCAACTGCCTCCTCAATCTGCTTACTTTTCATGTTT
ATGTTATCTCTTAAAACACTGCATCTTGATTTGCTGGTGGGTTTCACTCT
CAGATTGAAAGGCTTACCCATTTCTTATCTATATTTTCTCAATTCTTTAC
TCTAGAGGAAGATCAAAACTGCAGTAAGTTAACATATTAAGCTAGATATC
CATCTGTCATGCATATTTCTTTACTAAATAGCTAAAAGCAAAGAGAAGAA
GGAGAACTCTGATTTCTATTATTCTATTTCAAAGAACTTTCTNAAAAAAT
GTATATTTAGTTTTATTTACCTAGCATTCTGAGGTTCCTTGACCTAGCAT
TTTGTGGTGAAATAGAGAAAATTTTAGGCATAAAAGAACCAAACATTTAA
AATATACTCAACATTGAAAAAAAAGGTGTTATGCAAAAAATTGTCATTAT
CTAAGCAAAATTGGCAACATTATTGACTAATATGTGACCTAGCGTTTTGA
GGTCCCTAAAGAAAAAAGTATATATTAGAACATTAATTCAAAATGTATGA
AAACTGTATCGAAAAAGTTTTCAACCTTTTTGGCATTCAAGCAGGTATAT
TTTCCAAACACTTTAAAGAGAAAACCAAGTGTCTGGCTAAATTTATCAAC
TTTGATGGGATCTCAAAAAACACCTAGCATTCTGAGGTCCCTTCACCTGT
AGAAATGATGAAATCTTATCTGTTGAAAAGCGCAACAGATGACTTGTGGC
AAACAATTCATGATATGCACCACTGGAGAGTCTTCTGAGAACTTTCCAAA
TTTTCCACCCAATACGTCACTCTTTTTATTTTTTATATTTTAAGTGCTTT
ATTGGGTCTGATTGGGTGGAAGATTTTAGAAGACTCTCAAGTGGTGCATA
TCAAAAATTTAAAGGAACTTTTATGATCTACTCAGAGAAAATTTTGCAAA
TGTTTATTCTTGTTAAAAAATACTGCGGCCATTGTATTCTTCAGAAAAAC
TAATAATTTTGAGATATCTTCAAGGTTGATGAGTGTGAATTAAAATTTGA
TCTTATAGCCCTCTAGAAAAAAATATATAAGTTTTTTTATGGTAGTTTTT
TTAAAATCAATTAGCAAAATTATTCTTGGTTATTCTCCTTTTAAGAGAAC
TTGTTATATTTTTGCCATCATTTCTAGCAACTTCCGGATGACGAGAGGGA
ATATTACAAAGAGAAAGCTAAATGGGAGTGGGATAATCGTCACACTACTG
GCAAATTTCAATCTAGATCAAGGAATCATTTTGATAACACAGGTGCCCCC
GTTACTGTAAGTCATTACCGTTCACCAATATTCGGCTCAATGAATGAAGA
CAATCACATAGAAATAGGCTGTCCATTTCTAAGAAAACGATCTTGTGTTG
AATGGGCTGTTCCATTTAAAATCCATAGAGGGGGTGGAAGAACCTTAACC
AATAATTATTGAAAATGTGTGGATGAAAAACCCTTGGAAAAATTCTTCTT
CACACCTTTAAAGTGAGGGTGGACAAATATAAAAACCAATATTTTTTTAT
TTTATTTTTTAGTATATTTTTTACCCCCTGGATAAACCTTTCCTCAAACC
CCCTGAAAATTCTTCTTCTGATTACCCCCTGGAAAGTTTCGTCCGCTCCA
TGAATGAATATAAAATGTAACGGCTCATATTTATGGAAGGACATCACTTA
TGGAAGGTCAGTCCCCAACCTGGATTCTTGCAAAAAGTCATACTTCCCTA
GAATTTTCTGACAATTTCAGAGTTACACCATAAATTTTTCTCTAAATTTT
TGAGACCTCTTAGGGATTTTTTCGCTGGCACCAGCTGGCACCTCCCCTGG
CCTGCCTACTTACAAAAGGCACCCTCTTCATAATTGAGAGTGACATTTTT
TATGGAATAGCACATGGAATCTTTTTTAGACTTCTAAACTAAAGAACACT
TTTAAGATAATGAAATTTCTATTCTCTAAAACAGTTTAAATTGTTTATTT
GAGAAAACTAAATGAGTTTCACGTCTCAACTTTAGGATGTTCTCTAATTT
TTGGAATAAAGAAAAATCATTTTTACCATGTTTTTTTTTTACGTAATACA
TTACAGGAACGTGTGGATCTGGTAAGGGTTATGGAAGTGAAACGCGAAAA
GGAGCGACAAGAAGTTTTCATGAGTTTTCTACCAGAAAGAGGTAAAAATT
TATTCTACTTTGGTTTGATATGTTACCCCTATGGGAGGGCGTTGGGGTCA
GGCTTCATTAGTTTACTACTGGATTTCCCTGCGAGATTTTAAACACCACA
AGTGATTTTTAAGCTCATTAAACTACATTTGGTTTGATATGTTACCCCTA
TGGGGGGCGTTGGGGTCAGGCTTCATTAGTTTACTACTGGATTTCCCTGC
GAGATTTTAAACACCACAAGTGATTTTTAAGCGCATTAAACTACATTTTG
GTTTGATATGTTACCTCTATGGGGGGCGTTGGGGTCAGGCTTCATTAGTT
TACTACTGGATATCCCAGCGAGATTTTAAACACCACAAGTGATTTTTAAG
TGCATTAAACTACAGTTGGGAAGTAGAGTTTTAACTCTGAGTTTTAACAT
GAGACTTAAGACTTCGAGCTTAGTATCTCAGGATTTAAAAGCTCAAAATT
TGCTCCAATAAGGCTTGGAATATAGCCTAGAAGCCACCGAACCCCTCAAA
AATCGAAATATTCAATGAAAGAAAGTGGAAGTGCTAAAATAGCAATTTCC
GCCGGAACTTTAAATTCTGAAAAACGTTAAAATGCACTGAAATTTCAATA
TATTTCGACCATGATTGTAGTTACTTCTCTTTTGGTCTATTTCTTGAAAG
TCAAAAATCCCTGTCAAAATCCATATCTTTTTTGATTATACACTAAAGCC
TGGTAATTCATCTGGAATTGTGTTCTCTGAAACAATTAAGGTGGGAAAAT
ATTATTATTATTTGTTATTATTCTTTCACTTTAAAAGGCGTCTTGGACCA
AAAGTTTTACTTCGTATCTTTCATCTGTCTTCTGGAGGAACCGAAATTTC
AACCCATAGAAGTTGCAGCGACCGAATTCAGTTTGTTGGGTGGTCGCGAA
CGAAGTTTCCACAGACATTTAAATCCAGGTTTGATTGCCTCATTTCCTTC
TCATTGTTTGCATTACCTTAGGCTCTGGTAGGGCATTGCTCACAGTTTTC
TAAGCAAAAAGGTCTGTTTTAGATAAATGAATTTTTTCAATTCATAGTTC
GGACCCCCCCCCTCCGAAAAAATGGAGAAGGGGAATCAGAAATTTTCATG
AAAAAGGGGGTGATAGCAAGGAAGGGGGGGGGGGTAGTTTAAAAAGGGGG
GTTTGCATGTATGTTGTAGATTATTTCAAGCACACTGTTATGAGATTTAG
TTTCAAAAAGAAAAAAAAAGTTTATTATTTCACTCAGTTTCACTTCCTCT
CTCTAAAGATATTTCACATATATTTTTTTTCGGCTATTTTTGTCGAAAAT
CCATGGGGGATAGGTATTTTTAAAGGTCGGGGATGCCAAGAAGGGGGGGG
TCATTTAAGAAGGAGGTCACACCCCTTTCCGCACTAAGCAATTTGATAAA
AAAACGCTTAACAAATTGTCATCTCTAACTATAAAACGATTGAATCTTTT
AGAAAAATACGAGCGTGGACTTTCTGATTTTACTTTCTTAATTTTTTTCT
TACGTCCAGGACCAATTCCTCAAGGTTACCGTTTCAAGGCACAACAACAC
AGTAAGTTTTGATTTTGTGATTAGCGTTGTTGGTAAGATGTTAAAGAGTT
TTATTTTTGTTTTTAGATTTTTAAGGAAAAACGATTAAAGTAAAATATAC
AATCAACCTTTAGCCGTGCGGTTGGCTTTTTAAGAATGGTGTTTTTCCAT
TTCATCATGGATATTCTTAACCTTTTTTGGGGGGAAATCATCATGAAACA
TTCTTACAACATTCTTAGATTTGGATCCAAAGCCAGCAAAAATCTAACGT
GTAATAAAACATACCTCAGGCAAAAATTTGGCATTTTTGTGGAACCTTTT
AGCATTGCTGGGGAATAATTGACAAGTTGATGGTAAAATGTTCTATAAAA
CTGGCATTCTGAGGTTGAGTTAGCCAAATTCCTTGATGGTGATATTCTTA
CCATGTTCTTAATTTTTTGGCCAATTTCATCATTAATATTCTTATAAAGT
ATATTGTATTCACGTTACTTGATTGCTTCCATGTAAGGGTATCTGACACG
ACCACTTCTACACTTGTGTTTCTATACCACCGTTAAGAAAAATTTTCTTT
GTATTTTCGTCACCAGTCTCACAAAAGCTGACCGTGCCACTAAGAGTTAA
CAGATGTATGGCACATAACAACAAAATGTCCAAAGATACTAACTAATCTT
CTAAATTGTCAATCCTATTTCCAGGTGATCTTACCCACAAACTTCCACTG
ACCGGAAAGATGCAGCTGGGAGATGATTACACCAAAATCTATGACGAACT
TTTTCATTTTTTATCGAAAGGAGGCCGACATATCCCTCCTATACACGTGA
AGGTACTAACTGAAAAAAAAATTTATTGGTAAAGAGAGAGATCAAATGTT
TAAGTACATTTTTTAGTTTTTTATCGAGAG Coding sequence (CDS) from alignment at scaffold_493:161518..169397- >TCONS_00069099 ID=TCONS_00069099|Name=TCONS_00069099|organism=Clytia hemisphaerica|type=CDS|length=4176bp|location=Sequence derived from alignment at scaffold_493:161518..169397- (Clytia hemisphaerica)
GTGATCTTACCCACAAACTTCCACTGACCGGAAAGATGCAGCTGGGAGAT
GATTACACCAAAATCTATGACGAACTTTTTCATTTTTTATCGAAAGGAGG
CCGACATATCCCTCCTATACACGTGAAGGTACTAACTGAAAAAAAAATTT
ATTGGTAAGACCAATTCCTCAAGGTTACCGTTTCAAGGCACAACAACACA
GCGTCTTGGACCAAAAGTTTTACTTCGTATCTTTCATCTGTCTTCTGGAG
GAACCGAAATTTCAACCCATAGAAGTTGCAGCGACCGAATTCAGTTTGTT
GGGTGGTCGCGAACGAAGTTTCCACAGACATTTAAATCCAGGAACGTGTG
GATCTGGTAAGGGTTATGGAAGTGAAACGCGAAAAGGAGCGACAAGAAGT
TTTCATGAGTTTTCTACCAGAAAGAGCAACTTCCGGATGACGAGAGGGAA
TATTACAAAGAGAAAGCTAAATGGGAGTGGGATAATCGTCACACTACTGG
CAAATTTCAATCTAGATCAAGGAATCATTTTGATAACACAGGTGCCCCCG
TTACTATGCCTTCAAAGAAAAGCAAGCAGAACAAGCCCAATGGATTTGTT
CTTTATGCAAATGAAATCAAAAACCAATTGTTGAAGGAAGGTCATTCGAT
TCGTAACATGCCTGATTTGATTGCTGCTGCTACCCCTAAATGGCAGGTGA
TCTTACCCACAAACTTCCACTGACCGGAAAGATGCAGCTGGGAGATGATT
ACACCAAAATCTATGACGAACTTTTTCATTTTTTATCGAAAGGAGGCCGA
CATATCCCTCCTATACACGTGAAGGTACTAACTGAAAAAAAAATTTATTG
GTAAGACCAATTCCTCAAGGTTACCGTTTCAAGGCACAACAACACAGCGT
CTTGGACCAAAAGTTTTACTTCGTATCTTTCATCTGTCTTCTGGAGGAAC
CGAAATTTCAACCCATAGAAGTTGCAGCGACCGAATTCAGTTTGTTGGGT
GGTCGCGAACGAAGTTTCCACAGACATTTAAATCCAGGAACGTGTGGATC
TGGTAAGGGTTATGGAAGTGAAACGCGAAAAGGAGCGACAAGAAGTTTTC
ATGAGTTTTCTACCAGAAAGAGCAACTTCCGGATGACGAGAGGGAATATT
ACAAAGAGAAAGCTAAATGGGAGTGGGATAATCGTCACACTACTGGCAAA
TTTCAATCTAGATCAAGGAATCATTTTGATAACACAGGTGCCCCCGTTAC
TATGCCTTCAAAGAAAAGCAAGCAGAACAAGCCCAATGGATTTGTTCTTT
ATGCAAATGAAATCAAAAACCAATTGTTGAAGGAAGGTCATTCGATTCGT
AACATGCCTGATTTGATTGCTGCTGCTACCCCTAAATGGCAGGTGATCTT
ACCCACAAACTTCCACTGACCGGAAAGATGCAGCTGGGAGATGATTACAC
CAAAATCTATGACGAACTTTTTCATTTTTTATCGAAAGGAGGCCGACATA
TCCCTCCTATACACGTGAAGGTACTAACTGAAAAAAAAATTTATTGGTAA
GACCAATTCCTCAAGGTTACCGTTTCAAGGCACAACAACACAGCGTCTTG
GACCAAAAGTTTTACTTCGTATCTTTCATCTGTCTTCTGGAGGAACCGAA
ATTTCAACCCATAGAAGTTGCAGCGACCGAATTCAGTTTGTTGGGTGGTC
GCGAACGAAGTTTCCACAGACATTTAAATCCAGGAACGTGTGGATCTGGT
AAGGGTTATGGAAGTGAAACGCGAAAAGGAGCGACAAGAAGTTTTCATGA
GTTTTCTACCAGAAAGAGCAACTTCCGGATGACGAGAGGGAATATTACAA
AGAGAAAGCTAAATGGGAGTGGGATAATCGTCACACTACTGGCAAATTTC
AATCTAGATCAAGGAATCATTTTGATAACACAGGTGCCCCCGTTACTATG
CCTTCAAAGAAAAGCAAGCAGAACAAGCCCAATGGATTTGTTCTTTATGC
AAATGAAATCAAAAACCAATTGTTGAAGGAAGGTCATTCGATTCGTAACA
TGCCTGATTTGATTGCTGCTGCTACCCCTAAATGGCAGGTGATCTTACCC
ACAAACTTCCACTGACCGGAAAGATGCAGCTGGGAGATGATTACACCAAA
ATCTATGACGAACTTTTTCATTTTTTATCGAAAGGAGGCCGACATATCCC
TCCTATACACGTGAAGGTACTAACTGAAAAAAAAATTTATTGGTAAGACC
AATTCCTCAAGGTTACCGTTTCAAGGCACAACAACACAGCGTCTTGGACC
AAAAGTTTTACTTCGTATCTTTCATCTGTCTTCTGGAGGAACCGAAATTT
CAACCCATAGAAGTTGCAGCGACCGAATTCAGTTTGTTGGGTGGTCGCGA
ACGAAGTTTCCACAGACATTTAAATCCAGGAACGTGTGGATCTGGTAAGG
GTTATGGAAGTGAAACGCGAAAAGGAGCGACAAGAAGTTTTCATGAGTTT
TCTACCAGAAAGAGCAACTTCCGGATGACGAGAGGGAATATTACAAAGAG
AAAGCTAAATGGGAGTGGGATAATCGTCACACTACTGGCAAATTTCAATC
TAGATCAAGGAATCATTTTGATAACACAGGTGCCCCCGTTACTATGCCTT
CAAAGAAAAGCAAGCAGAACAAGCCCAATGGATTTGTTCTTTATGCAAAT
GAAATCAAAAACCAATTGTTGAAGGAAGGTCATTCGATTCGTAACATGCC
TGATTTGATTGCTGCTGCTACCCCTAAATGGCAGGTGATCTTACCCACAA
ACTTCCACTGACCGGAAAGATGCAGCTGGGAGATGATTACACCAAAATCT
ATGACGAACTTTTTCATTTTTTATCGAAAGGAGGCCGACATATCCCTCCT
ATACACGTGAAGGTACTAACTGAAAAAAAAATTTATTGGTAAGACCAATT
CCTCAAGGTTACCGTTTCAAGGCACAACAACACAGCGTCTTGGACCAAAA
GTTTTACTTCGTATCTTTCATCTGTCTTCTGGAGGAACCGAAATTTCAAC
CCATAGAAGTTGCAGCGACCGAATTCAGTTTGTTGGGTGGTCGCGAACGA
AGTTTCCACAGACATTTAAATCCAGGAACGTGTGGATCTGGTAAGGGTTA
TGGAAGTGAAACGCGAAAAGGAGCGACAAGAAGTTTTCATGAGTTTTCTA
CCAGAAAGAGCAACTTCCGGATGACGAGAGGGAATATTACAAAGAGAAAG
CTAAATGGGAGTGGGATAATCGTCACACTACTGGCAAATTTCAATCTAGA
TCAAGGAATCATTTTGATAACACAGGTGCCCCCGTTACTATGCCTTCAAA
GAAAAGCAAGCAGAACAAGCCCAATGGATTTGTTCTTTATGCAAATGAAA
TCAAAAACCAATTGTTGAAGGAAGGTCATTCGATTCGTAACATGCCTGAT
TTGATTGCTGCTGCTACCCCTAAATGGCAGGTGATCTTACCCACAAACTT
CCACTGACCGGAAAGATGCAGCTGGGAGATGATTACACCAAAATCTATGA
CGAACTTTTTCATTTTTTATCGAAAGGAGGCCGACATATCCCTCCTATAC
ACGTGAAGGTACTAACTGAAAAAAAAATTTATTGGTAAGACCAATTCCTC
AAGGTTACCGTTTCAAGGCACAACAACACAGCGTCTTGGACCAAAAGTTT
TACTTCGTATCTTTCATCTGTCTTCTGGAGGAACCGAAATTTCAACCCAT
AGAAGTTGCAGCGACCGAATTCAGTTTGTTGGGTGGTCGCGAACGAAGTT
TCCACAGACATTTAAATCCAGGAACGTGTGGATCTGGTAAGGGTTATGGA
AGTGAAACGCGAAAAGGAGCGACAAGAAGTTTTCATGAGTTTTCTACCAG
AAAGAGCAACTTCCGGATGACGAGAGGGAATATTACAAAGAGAAAGCTAA
ATGGGAGTGGGATAATCGTCACACTACTGGCAAATTTCAATCTAGATCAA
GGAATCATTTTGATAACACAGGTGCCCCCGTTACTATGCCTTCAAAGAAA
AGCAAGCAGAACAAGCCCAATGGATTTGTTCTTTATGCAAATGAAATCAA
AAACCAATTGTTGAAGGAAGGTCATTCGATTCGTAACATGCCTGATTTGA
TTGCTGCTGCTACCCCTAAATGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069099-exon-scaffold_493-1575043694:169232..169397 | TCONS_00069099-exon-scaffold_493-1575043694:169232..169397 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1575043694:164842..164970 | TCONS_00069099-exon-scaffold_493-1575043694:164842..164970 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1575043694:163957..164041 | TCONS_00069099-exon-scaffold_493-1575043694:163957..164041 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1575043694:163020..163160 | TCONS_00069099-exon-scaffold_493-1575043694:163020..163160 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1575043694:162397..162438 | TCONS_00069099-exon-scaffold_493-1575043694:162397..162438 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1575043694:161518..161723 | TCONS_00069099-exon-scaffold_493-1575043694:161518..161723 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1510915933:169232..169397 | TCONS_00069099-exon-scaffold_493-1510915933:169232..169397 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1510915933:164842..164970 | TCONS_00069099-exon-scaffold_493-1510915933:164842..164970 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1510915933:163957..164041 | TCONS_00069099-exon-scaffold_493-1510915933:163957..164041 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1510915933:163020..163160 | TCONS_00069099-exon-scaffold_493-1510915933:163020..163160 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1510915933:162397..162438 | TCONS_00069099-exon-scaffold_493-1510915933:162397..162438 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1510915933:161518..161723 | TCONS_00069099-exon-scaffold_493-1510915933:161518..161723 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1491911889:169232..169397 | TCONS_00069099-exon-scaffold_493-1491911889:169232..169397 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1491911889:164842..164970 | TCONS_00069099-exon-scaffold_493-1491911889:164842..164970 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1491911889:163957..164041 | TCONS_00069099-exon-scaffold_493-1491911889:163957..164041 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1491911889:163020..163160 | TCONS_00069099-exon-scaffold_493-1491911889:163020..163160 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1491911889:162397..162438 | TCONS_00069099-exon-scaffold_493-1491911889:162397..162438 | Clytia hemisphaerica | exon |
| TCONS_00069099-exon-scaffold_493-1491911889:161518..161723 | TCONS_00069099-exon-scaffold_493-1491911889:161518..161723 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_493 | supercontig | scaffold_493:161518..169397 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0060964 | regulation of gene silencing by miRNA |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0060964 |
regulation of gene silencing by miRNA |
Blast
BLAST of TCONS_00069099 vs. Swiss-Prot (Human)
Match: MAEL (Protein maelstrom homolog OS=Homo sapiens GN=MAEL PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.580e-18 Identity = 62/237 (26.16%), Postives = 109/237 (45.99%), Query Frame = 2
Query: 26 MPSKKSKQNKPNGFVLYANEIKNQLLKEGHSIRNMPDLIAAATPKWQQLPDDEREYYKEKAKWEWDNRHTTGKFQSRSRNHFDNTGAPVTERVDLVRVMEVKREKERQEV-FMSFLPERGVLDQKFYFVSFICLLEEP-----KFQPIEVAATEFSLLGGRERSFHRHLNPGPIPQGYRFKAQQHSDLTHKLPLTGKMQLGDDYTKIYDELFHFLSKGGRHIPPIHVKVLTEKKIYW 718
MP++K+ +N + + E +L + G + + D I + W L ++E+E Y E A+ EW R GK S PV + ++ K+ ++ +S ++ +L FYF++ E P +F P E+ ++SL G FH +NPG IP+G+RF Q SD +HK+P++ + G + + L+ F+ + PPI+ K ++ W
Sbjct: 1 MPNRKASRN---AYYFFVQEKIPELRRRGLPVARVADAIPYCSSDWALLREEEKEKYAEMAR-EW--RAAQGKDPGPSEKQ-----KPVFTPLRRPGMLVPKQNVSPPDMSALSLKGDQALLGGIFYFLNIFSHGELPPHCEQRFLPCEIGCVKYSLQEGIMADFHSFINPGEIPRGFRFHCQAASDSSHKIPIS-NFERGHNQATVLQNLYRFIHPNPGNWPPIYCKSDDRTRVNW 225
The following BLAST results are available for this feature:
|
