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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069212 ID=TCONS_00069212|Name=TCONS_00069212|organism=Clytia hemisphaerica|type=transcript|length=1831bp
ATGGATGTAATTTTTAGAGAGTATGTATAAATGTTGACGATtgattttaa
ctgtttttaatgCTTTTATATCTATCTATTTTACTTTTAGACCTGATGAT
GGATAATAATCCCAAATatattgtcaaaaataaaataacaaaatagtTGG
TACCAATCTTATGAAAATCTTTGATGGAGCCTACCATTCATGCCAAGTCA
CCCCTTGCAAGCCCTGACCCATTCAAAGTGTACACAAAACGGAGTGTGAA
AATTGACTACAAGAAAAATCCAACAATGTCAAAATGTCAAGGACAAGCAA
GGATATTTCAAAGACGCTCAAGTGAGAAGCCAAAAGTTCCAGTGTTGCAA
CCTTTAAAGATGATGATGTTCGATACAGACCCTCTGTCTTTGTTGACAGT
GTCACAAAGTtcaggcattgactctccagaACTTGTTTCTACTCCAAAGG
ATCAAAATAAATCACAATCAAATATACCTATTGAAGCTTTAAATAGCACA
GATCCCCTGAATTTATTTCCAGAAGATGATAATTCAATCACCAGGTCAGC
TCGCAAACGTAAGAAAAAACGTCATCGAACATCGTCAATAGTTTGTGGTG
AAGACGAGGAATCATACAATACTTCAGAATTAATTTCCCCAACTGAAGAA
ACCCCATCAAAGCAACTTAAATATATCCAAGACATTCGTTCTCCTATAGT
CGAAAAGAATAATGAAAAGACAAAAGTATCTTTAAAAAGATCCAAATTTA
AGTATGGGAATTTCATTAGTTACAATAACACCAATGTCGAATCAAGTTCA
GTTGACAATATTAAACCTTGGCAAATAAATAGGGACCAACGTTtacataa
tttcaaaaaagaatggtTTTCAGGGAAGAAGTGTTTATCAATCGGATGCG
GGGATGGTCAAATTGTGTATTGGATTACCAAGAATTGCCATCCTTTGTTG
ATCACTGGCTTAGACATAGATGAAGGATTGATAAATATTGCTAAAAATAG
GAGTAGAGAGTTTCAAGATAATCATATAACAGACAAATTAGATTTTCCGG
TATCCATTCCAATGAGTTGTGGTCCTATTTCTACTGGCTTTAAAATCACA
CCTAGAAATATAACCAGGAATAATAGTACCTCATTCATCCATGGTGATGA
TCCATGAACCATCTTGACACGCACCTTCATTTCACAAGATGCAATTCTGG
AAGGTGGTGACTCCTACAAAAATGGTTTCTTTGGCATGTATGGAAGAGAA
CAAAATATCCCCCATTTTCTGATCCTCTTCGTGCAAAGTGTCTCTTTCTA
TCATTACATCGCCATCATTTTACGATAAAGGGCGATTATGTACCAGCATC
TCAACAAAGTTTGGAATCCGTTCAACAGGAATATGAGACCATTGTCTTCT
TGAGTACCAGTAAATGGATCCATCTCAATTATGGCGATGAAGGACTTAAA
CGCACTTTCAAGAAGATTTTCTTTCAACTTCGTCCAGGTGGTCGGTTGTT
GTTTGAACCACATACTATTAGCTGTTACAAAAAGTCAAGAAATCTAACGA
CTGGTATCCGGCAGACATACGATAAGATGCGATTTCAACCGTCCGACTTC
ATCACTTATTTACTTTCATCTGAAGTTGGCTTCAAACAATCTGTTTGCTT
GGCACATACACGAAAACGAAAAACAAataacCTTCGACCGTTGTACTTAC
TTACAAAAGGTGATGGGTGAAGCACAAATTTTAGCatacttaatttttta
tttcttgtacATTATATTTCAACCTGTACATAGTAACCAAAAACTAAATC
ATCAAACATACCTAAGTCCTATCAGATCATT Run BLAST on NCBI protein sequence of TCONS_00069212-protein >TCONS_00069212-protein ID=TCONS_00069212-protein|Name=TCONS_00069212-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MEPTIHAKSPLASPDPFKVYTKRSVKIDYKKNPTMSKCQGQARIFQRRSS
EKPKVPVLQPLKMMMFDTDPLSLLTVSQSSGIDSPELVSTPKDQNKSQSN
IPIEALNSTDPLNLFPEDDNSITRSARKRKKKRHRTSSIVCGEDEESYNT
SELISPTEETPSKQLKYIQDIRSPIVEKNNEKTKVSLKRSKFKYGNFISY
NNTNVESSSVDNIKPWQINRDQRLHNFKKEWFSGKKCLSIGCGDGQIVYW
ITKNCHPLLITGLDIDEGLINIAKNRSREFQDNHITDKLDFPVSIPMSCG
PISTGFKITPRNITRNNSTSFIHGDDP Run BLAST on NCBI transcript from alignment at scaffold_496:698391..711245+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069212 ID=TCONS_00069212|Name=TCONS_00069212|organism=Clytia hemisphaerica|type=transcript|length=12855bp|location=Sequence derived from alignment at scaffold_496:698391..711245+ (Clytia hemisphaerica)
ATGGATGTAATTTTTAGAGAGTATGTATAAATGTTGACGATtgattttaa
ctgtttttaatgCTTTTATATCTATCTATTTTACTTTTAGACCTGATGAT
GGATAATAATCCCAAATatattgtcaaaaataaaataacaaaatagtTGG
TACCAATCTTATGAAAATCTTTGGTAAGTACATTTGGCACGATTTACATT
TagtaccgggtgtgccacaaagaAGTTACCCTTTTTGATTTAATATTGCA
GGcgaaggaaaataaaaaaaatatatattttttgaattgtttaaaggaaa
gcctaacttaaaatttggtgtattatttttgaaatttgcttTATTAGTTA
AGAAGTTATGGACAAAAAACGAAAacatcaattttaaaaaatgtcaaata
tacAAATATAACGGACACAAAAATCAAATATAACGAAACGATAGAAACAT
CCGTTTATCGTAGTGAATATAAATTACCTAATCATTGGAAGTCGAGAGTT
CCAAAACGATACAAACGAAATGCGATCAACACAGATATCCACCGGGCAGC
CAAAATATCATCGAATTTTGACAACGAAAAGAAATTGATAAAGGATAAAT
TTCAACGAGCTGGTTTCCCACCAAGATTTATTGATAGTGTATTTCGTCAG
TATACAGAAAAATATGAAGACGAGGTTATCATtccacaaaatttctttga
tgagcaaaaagaaaagaatatcaaaatcGAAATTCCTTATTgcgagaaaa
atgaagaaatatcATCAAAATTCCTAGAAAAATTCAAAGCCTTTACAAAT
AATCGGTATAACGTTTCAATAAAATGGAACACTAAGAAAGTTAGAAACTT
GTTCAAAttgaaaagccaaaatccaCATCCGTCTTGCAAAATCTACCAAG
GAGATTGTATATGCGGGGAAACATATATTGGTGAAACGGAAAGAAATGTT
GAAGTCAGGTGGGGTGAACATACGTCATCAAGTGGGACATCTGAACCTTC
AAAACACCTCCTTAATAACCCTGATCATGCTTTCACGTGGAAAATCCTAT
CGCCTGCTCCaatcaacaaaaaagaaagaaagagccTGGAAGCGTTTTTA
ATTGCCTTGAATGCCCCTTCATTGAACAATCAAACCGAAACAAAAACTTT
ACTACTTTTTCGGAATGGCATAACTTGATTTTAATagcaaaacattttaa
tattttatgtttttattaccCTTGAGAAATCANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTACAGGGATCGTT
AAccgataaaatttttaaaagaatcttatttCTATGGCTTGTCATATTAA
ATCGAAAAGGGTAACTTCTTTGTGGCACACACGGTATATTTGAAGTATAG
TATGTCAAAGTAAAATGTTAGAATTGATATTCCCAATGAAATAACGACAA
CTAGTTTGCAAGCAAATGATGATGCATATAAACGTTACAACTCGCAATCA
CCAAAAGCCACCAAGTGACACATTTCTGAAGGCTTGTTAGCCTGGTTTAA
ATATATCAAATCCAAACCGGACCAGAGATTCCCgcaatttgacatttttt
gataaattttatcctGCTATTTCCGAAACATTACGCCAAAAATCACTGGT
AATTGCACAACAATATATAGATATTCCTGAAGAAGACGACAATATCATCA
TACATACTCGCAAATTGCTTTTATTCGCCAATCGCAGCACCTTGATTAAG
TCAAAGGTCAATCCTGACTTTGATGTTACGATTTAGACTTAGAGTTATGA
TTGCGTGGAGCTGTGTGAATTGGTTGACttaatatatagattaaaaTAAA
CTTCAGGATCTATGGCATTGACACATGTGGTCTTTACAGGTCTTTGCTCT
CAATCAAAAATAATAGCTTAAAAGTCACAGCCGATGCAAACTTTAGAAAT
CGTAAACTTCTTAGATATAACATTCAACCTAAAAATATAACTATATAAAC
CCTATTATAAACACAAGAGTGAACCGATTAATAATTAAGTACATCCCTAG
CATTATATCATCTCGAGAATTCCATTCAGCAAAAAAGCTTTCGATCAAGC
AGCACCCTAATAAATAATGCCCTAAAAGCAAGTAGCTACAAGGAAATTCA
ATGAACAAGAAAGATACTGTAAAGAAAAGTCAGAAACATCAAATCATCTG
GTTAAACCCTCCTTTTAGCTTGAATGGGAAAACgaatatttgacaaaaat
tcttaATCTTATCTATTATTGAAATTCTAAACCAAATTATACACTGGTAT
TGTTCCTGCATATGACAAACGATTTTAAAACAGACAAGCTCACAAAGTTT
CTctttttaaaacttattttcttaaacactttttttcaggaccaccaccc
tttgcagttactacattttggtagtaactgttttgagaaaagatttccag
gtaccacccctgtttttgagtgatatcataaaaaaaatgctcaaaattac
cctaaattatttttcaacctaaagccatttttgtgctagattttctttta
atttacttggttaacagctgttgagaacattttaatgataattagggaaa
gcataatttcaaagtcttTGGGTctgtccatttataacaaaaatattttt
tttaacaaagaattttttcacaaaaaaattcatttttggtgaaaattttt
gaaagttcttaataaaaataattaaaatataagcacttactacaccaaaa
gtgctagcgttagtgtttggcaccgcccccaaacagcagttataCTACAC
TGTgcagtaactgttttcataacatCTGAATACAgctcgggtgagttagg
gcgtgtctagatttttaaaaatcacaaatcccgaatccgcgaccaatagc
acccattctcagggattcacttatggatttttagatgaCCTATACCTTCA
AGTTTCAGGACCCGGTGTTACGTAATTAAATATTAACCTAAAAATTGatt
attaaagaaagtgtgaattgtgacgtcatcaaattatgacatcataaatc
gtaaattagctctaactctataagtacatgtcaaatctttgtcaaatttt
gaccaaagacgcatctacaaaaaaagtgttttgaaaccttttttcctTCT
TGCTCTAGCAGTGATTTTCTGTTTACGTCCATTTTGACAACGAAAtgtgt
cccgtccgaaatcattgcACATTGCCCCTATTTTAAGAGTGTTTATTGAA
GGTTTTTTAAGTTTGAGAGTAAGCTCAATCTATGTGTTTGAAAACCTGtc
aaaaagtatgattttaCCATTAGGTTACCATTCAATAGGTCCCAGTGCAT
TGGTGATTGGAAGTGACACCAAAaaatgtcccgtccgaaatcacaATAAG
ATTGACAATATTTCTGAAATTCTGCAgggtagaaagatttgaatggcTGA
ATATTGAAATCTAGGATAGAGCATATTTTAATTGAGTAAATCTAAGATTC
AAAGCTCTTCAGATTTGATTCCAGGGGTACTAGAAAaaatgtcccgtccg
aaattATTAATCCTGTCCGAaatcataacttttcaaatatgTTTCAATTT
GTAATAAAATGAATGTTTAACATTCAGGAAGTTATTAGCAAGACCTAGTG
GTAAGAAAAANNTCTATTTAGAATAGTAGTATATTTACTTGTATGCTTAC
TGATAAGTTTagcaaaacttgaaataaaacagatttttatgaaaatgatt
tcggacgggacaggAAAAATTTAGTGCAAATCACcctgaaaaaagatgaa
aaaggtgATAATACAGATTTTTAAGggggccccccccagcggtttgcgtg
aatgcgtgaatgggcttttttggttgcgtgaatgcgtgaaaatcgaaaaa
aaattgcgtgaatgcgtgaattgNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNggaggcggccatgacttcaccacgtttttgcaaataaaaa
gaaacttatttcaaagaaatctttacccatgatgtagactttcgataacc
tgattttttggcaaaattagtctgaaatggattcgtatttaagcacatca
gagggttaaaataaaaattttctcctgtcggcgcaaaacatggttgcgcc
tccttagtcactatgttttcggcccctaCACgtaggaaattaattcgcga
gcccgtgattaaaacctttctttttaaatttttttgatcgcCTTCCTCGC
Agcaaatgttcattcttttacctcattttacaagctatcaagcgatcgta
ccttgcctctaacgaatttagactacattctttttcaatggtgttaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcatca
tggtgtcatactcgagtttgtttgacctatttttgataatgtttaagcta
ttttttgtacaaaaattcgcctgcggcgcatatcttttcacttactattg
cgatacgttaactgcagaGGCTTCACCTTCTGTTAGACCTTCACAAGTTA
GAAGCTTGTCACGATCGTTTGGAGAAGGTGaagcttcaaatattttgcgt
gatggcatgtgattaaaattgaaaaattacgtaacgctttctatttgggg
gcttcttatgaATGATGCTACcaaacacggtgttttatagtcaggtctac
atgaaaaaatcactactgagttaagtttttctcaagtgcatgaccatatc
cggtcgaataatatctcgagtacagccttgtcatacttttttatgcaaat
cgaacgttttactccataatggcggaaattacgtaaattacgtcacttag
cgaaatgtgcaagacctctatttttgacattttccccgattttccccCGA
TTTtctccgaaaatttccccgatttcccaaaaaattgggtttgcgtgaat
tccgagaaaaacttgcgtgaatgcgtgaattgcgaaaaaattttgcgtga
atgcatgaaatttgggtccgctgggggggcctctttaaGATCTATTTTAA
TTTGAGGAAGGCCTTTATACGAACAATTTCAGGCTGTTCTACAGCTTCCT
TAGTTCCTCAAtacatttttctgatgtattctAGCCTTTAGTTTGCAAAT
TTTGTCCGTCGGAAATCATTTTCGATATCTACATGCCAATCAAAAGAATG
CAACAAAAAAAGGATTTCACCCAAGTTTAATGATCACCTGTTACAACCCT
TATAATATGTGATACTGTCTCCAGTGCaagttagttttgattttttttac
cacaaatttaccattttcataCGTTCTAACAGCTCCATGAGcccctatat
ctttattattagGCCTTAAAAGGTGGTGTCAAGGTACATTTCCATGAAAT
ATAGGCTATAGACTGTCATAGAAAAGTNNttatttttcatgatttcggac
gggacacggtacagatttagcgcaaatcgcccataacttttgatgacCCA
TCCAAATTTAAGTTCATCTTTCTTCtggttctttcaaaatttttagataa
aGCCCGTGAGCTCGACCAACTTCGCTTGAGAAgtatgattgacagattaa
attcTTCACCCGCGCCGTCGTTCTGCGAGCATTCTCGGCTAAATCCTCGG
accgtgttaaaaatggtagactcagctgtgacagatcatttccatggaag
ttgttggaatgtttacaagaaaaagactcttgacagaaaatcctttgttt
tattgtcaatggaTGACAGTGTCGTTATTAATTtagttagatctgacata
ttgatgtttgtaagtgcactttatagttttgattcccatcaaAGAATCAT
TTTCTGGTTTTCATCATGTTATTAGAtactgttttagagctttagagcta
gcctgcgAGTGGCTGTCTCTGTCTTCCCACCCGTCCTATACTACAATTAG
CATGAAGTTTTATTGCGGCAGGCAAATTAATTTGCTTAGGTGTACGGTCC
AAGGTATNTTGAAGTTTTCTTGCGGCAGGCAAATTAATTTGCTTAGGTGT
ACGATCCAAGGTATAGACccctttcataatttttcagcttgttTTGGTTT
TCTCGCTTAGTCTTCTTTTCTGtatggtcttttttaacaaaatctggAAT
AAAAGAGACAGAATTCGGAGGCAAAGTTGGAGGCATATTGCCTCTATTAT
CCaaatttgtaatatattttatttaggcTAAACAAGGTAATCCAAAACAT
ATGACATCACATGAAAGGGNCATGAAGTTTTATTGCGGCAGGCAAATTAA
TTTGCTTAGGTGTACGGTCCAAGGTATTGCCCGAACTTTTTCATGCCATT
TAGGTAGCAATCATTTAGTGATTAGGAACTTGAAAAAGTCCCGAAACAAA
CAGCATGACCCAAAAATACAAgcacaaacatcaatttttgaaaaattgat
gttaATTACGCTTGTTTGggccagacgtccgcgctcgataggattgatca
tcggaacggcttgatgacggatcgatatgtgatcgatggattacttaacg
atccggataggagatcgatagaggatcgatactcaagatttttttaagct
tatgattagttatcgattatttgtcgatctatcatcgatcttttatcaaT
ATCggttacgatcgataacaaatcgattaaggatcgatgacgaattgata
gaccttttttcaaagaggacgtcctgttgaataattatgtagtctaGCCA
TAGAAACAATGATAGtgtactgtatcatgcatattgtaataattacgcat
ggttttatcattgtttttctgctggactacataagtatatacatattcaa
cagggtggcctctttgaaaaaaggtctattaacgatcgatgacgaatcgg
tatactcgattgaaatactagctcgataatggatcaacgaaggatcgata
ctcaagactttttaatggctgaatcttccatcgatctcctttaagtaatc
catcgatcacatatcgatccgtcatcgagccgttctgatgatcgatccta
tcgagcgcccAGTGTGGAATCCATGCAAAAGCCACGCCGAAGATATTTTG
AGGATCAAGAAGGTTACACCCAATTGAGGACATTctcacgccgaatatat
tcggtGTACTGTGCATGAATTCCAGACTGGTCGAGCGCGGGACAGGTTTT
CAGCcttaatctttttttaatctcttgatatcgaaaaaatcaataaaaca
tACAGTCAACGTAACGTATACAGTAGACCTCATCCCCATATGATACAATG
ATGATAAACCATGATATGACCAAGAAAACAGCTCAGTACACACAGACCGC
CACAGACCACCACAGACCACCACCACAGcttctaaatatttttcatgtgA
CTCCGCCAACCATGATGTTAGAAATGTTGTGATTACCTCGATTATTAAGC
agtatttttcttgaaaaagcttagattttttaaataagcgagacaaaaat
attaaattccCGTCAATCAAACTAAAATAATCAGATCCACGAATTCTCTG
AACGAATGTTTTTGGTATTACTGCTAACTTGGAACATGTATTAATGACTT
TTTAGAAACTCGCAAATTTCAGTCGCTGGTTTTCCTCAAAACGTTCGAGG
TGCCTGAATCCAgtcaaaacctttaaactttTAGGAAGCTTCCTGTCGGA
AAAACTACTTCATATATGTGAAAAGAAGGTATGTAACATTATGTTTAACT
CAAAGAAGTGTGGCTTGTATCATTAGGGAGATTTAgtgatttttgtacga
tttcTGGGGGCTCTGGGCGTTGCAGTTGTTTTCAGTTTTAATATGACGAC
GTCATGGTCTGAGATGGAGAGACCTAATTCGTTCTCCATCGTGGCAAAAT
TGTGAGAACCACAATTTTGATGTTGATTGTTCATTTACATTTACCTAGTA
CCCCTCTAGGCCTCAAGAGTTCATCGAAAAGCATCCCTTTACAGctgctt
ttgttttgttttttagttATTGTAAGAGTTTGTAAGAAAAAGGTCTAAAA
AAGAGTGGGCGTTGGAACCTACCTGTGGACCCTGGCTAGAGGGGAGAGGA
GGGCGAGCAAATTGGCTGAAAGGTGGGTATGTACAGCACTCACGCAAGGG
GGGTTTCAGGGGATACTCGATTCCGCAATTCTGctaattttttctccaat
ttccgtcaaactgTTTAAAATTGAACCTAAATTCTGCCACCAAAAATTCC
TTTAAAATTCGAGATTATTGTCAAAAATTCCgcgaattttgaatattttt
tgccaattccaaaattctgcaaaagcTCCACCAACCATGAACCCCCCGGC
ACACAAGTCAAAGTGTGCTCCTGTCTCTGGCAGATTTCCGTCTACGTGAA
GTAAATAAAGATTTTGTTTCTTTTAGGGAGCCGtacatattcatttgaca
acgcatagcgtcaaattgacgttacgagggggtggggggttttcaaaagt
tgggtttgacgttataagaaatcaaaggtatacctttttgtCAAAATCGC
GAATATTTGTTTTACCACCAACCACACTATACTTTTTAAGTTGtcgaaaa
tatatttgtgtatgaattacatgaaaatttgcttgcataatcccattggt
tcGCGCTATGATGTCATTACgtatcatattttcattgtttgcgcaATCAA
GCGACGGCACGGACCTAGCGCTAAGTGGagcttttgatttctttctaaat
aaaggtcattagttaaaagaacacatacacgCACGTCTACAACCAAGTAC
GGACTTTGCGatgggaaaactttgatgaaaaaatggcaacaacttttggt
atacaaactttcaaaagtttcaaactTGCCAAAATTTAAATATTGTTAAA
TTATTATTGTTTAatatttcatttatcagggttgttttgtaccgaaaatg
ttttccaaaaaatttccaaaaaaaagaatttttttttaacctaCCACCCA
GTGTTTAATAGTTAtgtattttaaaatcttttctaGATGGAGCCTACCAT
TCATGCCAAGTCACCCCTTGCAAGCCCTGACCCATTCAAAGTGTACACAA
AACGGAGTGTGAAAATTGACTACAAGAAAAATCCAACAATGTCAAAATGT
CAAGGTAGGCTATAGCGATTTCTTTAATTCGCCCATTGTGATGTATTTCC
TTTCAGCAATGATATTTGTTTTTCAACAAGGTATTCTAAAGCCTGTGGTC
AAGTAAAACATACAATATAGTCCATAATTATTTGCTCACATTCACTAAGT
TCTCTTACACAGCAAAGCAATTTAAATTATATTAAAATTGTATTTAACTT
CATGCCTTTATTCATTTAGGACAAGCAAGGATATTTCAAAGACGCTCAAG
TGAGAAGCCAAAAGTTCCAGTGTTGCAACCTTTAAAGATGATGATGTTCG
ATACAGACCCTCTGTCTTTGTTGACAGTGTCACAAAGTtcaggcattgac
tctccagaACTTGTTTCTACTCCAAAGGATCAAAATAAATCACAATCAAA
TATACCTATTGAAGCTTTAAATAGCACAGATCCCCTGAATTTATTTCCAG
AAGATGATAATTCAATCACCAGGTCAGCTCGCAAACGTAAGAAAAAACGT
CATCGAACATCGTCAATAGTTTGTGGTGAAGACGAGGAATCATACAATAC
TTCAGAATTAATTTCCCCAACTGAAGAAACCCCATCAAAGCAACTTAAAT
ATATCCAAGACATTCGTTCTCCTATAGTCGAAAAGAATAATGAAAAGACA
AAAGTATCTTTAAAAAGATCCAAATTTAAGTATGGGAATTTCATTAGTTA
CAATAACACCAATGTCGAATCAAGTTCAGTTGACAATATTAAACCTTGGC
AAATAAATAGGGACCAACGTTtacataatttcaaaaaagaatggtTTTCA
GGGAAGAAGTGTTTATCAATCGGATGCGGGGATGGTCAAATTGTGTATTG
GATTACCAAGAATTGCCATCCTTTGTTGATCACTGGCTTAGACATAGATG
AAGGATTGATAAATATTGCTAAAAATAGGAGTAGAGAGTTTCAAGATAAT
CATATAACAGACAAATTAGATTTTCCGGTATCCATTCCAATGAGTTGTGG
TCCTATTTCTACTGGCTTTAAAATCACACCTAGAAATATAACCAGGAATA
ATAGTACCTCATTCATCCATGTAAGTCTTTCAATATGTTAATTTACTTGT
ACTGTGATTAAAAACGTCTTTATATTCTCTTCGGCTAAGTGAAagctttg
atttgatttttttgagctCTATATTTTGTTGGTAACATATTTATTTAGGG
TGATGATCCATGAACCATCTTGACACGCACCTTCATTTCACAAGATGCAA
TTCTGGAAGGTGGTGACTCCTACAAAAATGGTTTCTTTGGCATGTATGGA
AGAGAACAAAATATCCCCCATTTTCTGATCCTCTTCGTGCAAAGTGTCTC
TTTCTATCATTACATCGCCATCATTTTACGATAAAGGTTAGACCCAAAAG
AGATGCCTTTTGAATTGAGATTCAAGCCTGCACTAAATGGCACTAGAAAN
AAAAGGTTAGACCCAAAGGAGATGCCTTTTGAATTGAGATTCAAGCCTGC
ACTAAATGGCACTAGAAAAGATTAGTTTGAAGGGATATTGCCATAATCAT
GTAACTGTCTTGTGGTATTTGCACCTAAAGATTTGGATGACAAATTTGTG
CTTTTAATACTAATGAATTGTTCAAACTTTATTTCTCAGGGCGATTATGT
ACCAGCATCTCAACAAAGTTTGGAATCCGTTCAACAGGAATATGAGACCA
TTGTCTTCTTGAGTACCAGTAAATGGATCCATCTCAATTATGGCGATGAA
GGACTTAAACGCACTTTCAAGAAGATTTTCTTTCAACTTCGTCCAGGTGG
TCGGTTGTTGTTTGAACCACATACTATTAGCTGTTACAAAAAGTCAAGAA
ATCTAACGGTAATTGTCTTTTTAAATGGAACTGATTTATAGTGAGTCCCA
CctaaattctgtcatttttaatGCATGTACGCTGTAGCCAAATGCATTGG
TTTTATCCGTTTTGCTCTAATCTCTAGCAAGGATCCATTTTCTTTTGACC
TGATTGCTTGCAGCGAGTCTAAACCAACACGCCCTTTTTTGGTTACGAAA
TTTATGCTATCGTAAATCTTTTGCTGAAAAACGTCATATAATGAAAGTCT
CAGAACCCTTTGTCGTTTACTGTATGTAAAAGTATGATACGACTCTTAAC
CTAACCGATGTAAATCATAtaatgtctctttttattgGAATTTAGACTGG
TATCCGGCAGACATACGATAAGATGCGATTTCAACCGTCCGACTTCATCA
CTTATTTACTTTCATCTGAAGTTGGCTTCAAACAATCTGTTTGCTTGGCA
CATACACGAAAACGAAAAACAAGTAAGAAATTCTCCTCTAAAGACTTCGT
AATGGCTTCCTTCTTCTTTTATCTTTGTTGGATTGTTTCCACGATAAAAA
GTTgtgttgatttcatttttttttcgcaCTGAAGTCTCTATATCATTTTG
AGCGGAAGCTCTTAACTAATCTCTAGTAAAGCGAACGTAATTAAAATTTC
TAGTTCGATTATTTTATACTTATACATTATtacttctgtttttttttcag
ataacCTTCGACCGTTGTACTTACTTACAAAAGGTGATGGGTGAAGCACA
AATTTTAGCatacttaattttttatttcttgtacATTATATTTCAACCTG
TACATAGTAACCAAAAACTAAATCATCAAACATACCTAAGTCCTATCAGA
TCATT Coding sequence (CDS) from alignment at scaffold_496:698391..711245+ >TCONS_00069212 ID=TCONS_00069212|Name=TCONS_00069212|organism=Clytia hemisphaerica|type=CDS|length=2952bp|location=Sequence derived from alignment at scaffold_496:698391..711245+ (Clytia hemisphaerica)
ATGGAGCCTACCATTCATGCCAAGTCACCCCTTGCAAGCCCTGACCCATT
CAAAGTGTACACAAAACGGAGTGTGAAAATTGACTACAAGAAAAATCCAA
CAATGTCAAAATGTCAAGGACAAGCAAGGATATTTCAAAGACGCTCAAGT
GAGAAGCCAAAAGTTCCAGTGTTGCAACCTTTAAAGATGATGATGTTCGA
TACAGACCCTCTGTCTTTGTTGACAGTGTCACAAAGTtcaggcattgact
ctccagaACTTGTTTCTACTCCAAAGGATCAAAATAAATCACAATCAAAT
ATACCTATTGAAGCTTTAAATAGCACAGATCCCCTGAATTTATTTCCAGA
AGATGATAATTCAATCACCAGGTCAGCTCGCAAACGTAAGAAAAAACGTC
ATCGAACATCGTCAATAGTTTGTGGTGAAGACGAGGAATCATACAATACT
TCAGAATTAATTTCCCCAACTGAAGAAACCCCATCAAAGCAACTTAAATA
TATCCAAGACATTCGTTCTCCTATAGTCGAAAAGAATAATGAAAAGACAA
AAGTATCTTTAAAAAGATCCAAATTTAAGTATGGGAATTTCATTAGTTAC
AATAACACCAATGTCGAATCAAGTTCAGTTGACAATATTAAACCTTGGCA
AATAAATAGGGACCAACGTTtacataatttcaaaaaagaatggtTTTCAG
GGAAGAAGTGTTTATCAATCGGATGCGGGGATGGTCAAATTGTGTATTGG
ATTACCAAGAATTGCCATCCTTTGTTGATCACTGGCTTAGACATAGATGA
AGGATTGATAAATATTGCTAAAAATAGGAGTAGAGAGTTTCAAGATAATC
ATATAACAGACAAATTAGATTTTCCGGTATCCATTCCAATGAGTTGTGGT
CCTATTTCTACTGGCTTTAAAATCACACCTAGAAATATAACCAGGAATAA
TAGTACCTCATTCATCCATGGTGATGATCCATGAATGGAGCCTACCATTC
ATGCCAAGTCACCCCTTGCAAGCCCTGACCCATTCAAAGTGTACACAAAA
CGGAGTGTGAAAATTGACTACAAGAAAAATCCAACAATGTCAAAATGTCA
AGGACAAGCAAGGATATTTCAAAGACGCTCAAGTGAGAAGCCAAAAGTTC
CAGTGTTGCAACCTTTAAAGATGATGATGTTCGATACAGACCCTCTGTCT
TTGTTGACAGTGTCACAAAGTtcaggcattgactctccagaACTTGTTTC
TACTCCAAAGGATCAAAATAAATCACAATCAAATATACCTATTGAAGCTT
TAAATAGCACAGATCCCCTGAATTTATTTCCAGAAGATGATAATTCAATC
ACCAGGTCAGCTCGCAAACGTAAGAAAAAACGTCATCGAACATCGTCAAT
AGTTTGTGGTGAAGACGAGGAATCATACAATACTTCAGAATTAATTTCCC
CAACTGAAGAAACCCCATCAAAGCAACTTAAATATATCCAAGACATTCGT
TCTCCTATAGTCGAAAAGAATAATGAAAAGACAAAAGTATCTTTAAAAAG
ATCCAAATTTAAGTATGGGAATTTCATTAGTTACAATAACACCAATGTCG
AATCAAGTTCAGTTGACAATATTAAACCTTGGCAAATAAATAGGGACCAA
CGTTtacataatttcaaaaaagaatggtTTTCAGGGAAGAAGTGTTTATC
AATCGGATGCGGGGATGGTCAAATTGTGTATTGGATTACCAAGAATTGCC
ATCCTTTGTTGATCACTGGCTTAGACATAGATGAAGGATTGATAAATATT
GCTAAAAATAGGAGTAGAGAGTTTCAAGATAATCATATAACAGACAAATT
AGATTTTCCGGTATCCATTCCAATGAGTTGTGGTCCTATTTCTACTGGCT
TTAAAATCACACCTAGAAATATAACCAGGAATAATAGTACCTCATTCATC
CATGGTGATGATCCATGAATGGAGCCTACCATTCATGCCAAGTCACCCCT
TGCAAGCCCTGACCCATTCAAAGTGTACACAAAACGGAGTGTGAAAATTG
ACTACAAGAAAAATCCAACAATGTCAAAATGTCAAGGACAAGCAAGGATA
TTTCAAAGACGCTCAAGTGAGAAGCCAAAAGTTCCAGTGTTGCAACCTTT
AAAGATGATGATGTTCGATACAGACCCTCTGTCTTTGTTGACAGTGTCAC
AAAGTtcaggcattgactctccagaACTTGTTTCTACTCCAAAGGATCAA
AATAAATCACAATCAAATATACCTATTGAAGCTTTAAATAGCACAGATCC
CCTGAATTTATTTCCAGAAGATGATAATTCAATCACCAGGTCAGCTCGCA
AACGTAAGAAAAAACGTCATCGAACATCGTCAATAGTTTGTGGTGAAGAC
GAGGAATCATACAATACTTCAGAATTAATTTCCCCAACTGAAGAAACCCC
ATCAAAGCAACTTAAATATATCCAAGACATTCGTTCTCCTATAGTCGAAA
AGAATAATGAAAAGACAAAAGTATCTTTAAAAAGATCCAAATTTAAGTAT
GGGAATTTCATTAGTTACAATAACACCAATGTCGAATCAAGTTCAGTTGA
CAATATTAAACCTTGGCAAATAAATAGGGACCAACGTTtacataatttca
aaaaagaatggtTTTCAGGGAAGAAGTGTTTATCAATCGGATGCGGGGAT
GGTCAAATTGTGTATTGGATTACCAAGAATTGCCATCCTTTGTTGATCAC
TGGCTTAGACATAGATGAAGGATTGATAAATATTGCTAAAAATAGGAGTA
GAGAGTTTCAAGATAATCATATAACAGACAAATTAGATTTTCCGGTATCC
ATTCCAATGAGTTGTGGTCCTATTTCTACTGGCTTTAAAATCACACCTAG
AAATATAACCAGGAATAATAGTACCTCATTCATCCATGGTGATGATCCAT
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069212-exon-scaffold_496-1491911889:698391..698563 | TCONS_00069212-exon-scaffold_496-1491911889:698391..698563 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1510915933:698391..698563 | TCONS_00069212-exon-scaffold_496-1510915933:698391..698563 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1575043694:698391..698563 | TCONS_00069212-exon-scaffold_496-1575043694:698391..698563 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1491911889:708427..708544 | TCONS_00069212-exon-scaffold_496-1491911889:708427..708544 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1510915933:708427..708544 | TCONS_00069212-exon-scaffold_496-1510915933:708427..708544 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1575043694:708427..708544 | TCONS_00069212-exon-scaffold_496-1575043694:708427..708544 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1491911889:708760..709610 | TCONS_00069212-exon-scaffold_496-1491911889:708760..709610 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1510915933:708760..709610 | TCONS_00069212-exon-scaffold_496-1510915933:708760..709610 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1575043694:708760..709610 | TCONS_00069212-exon-scaffold_496-1575043694:708760..709610 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1491911889:709739..709926 | TCONS_00069212-exon-scaffold_496-1491911889:709739..709926 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1510915933:709739..709926 | TCONS_00069212-exon-scaffold_496-1510915933:709739..709926 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1575043694:709739..709926 | TCONS_00069212-exon-scaffold_496-1575043694:709739..709926 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1491911889:710180..710398 | TCONS_00069212-exon-scaffold_496-1491911889:710180..710398 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1510915933:710180..710398 | TCONS_00069212-exon-scaffold_496-1510915933:710180..710398 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1575043694:710180..710398 | TCONS_00069212-exon-scaffold_496-1575043694:710180..710398 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1491911889:710736..710862 | TCONS_00069212-exon-scaffold_496-1491911889:710736..710862 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1510915933:710736..710862 | TCONS_00069212-exon-scaffold_496-1510915933:710736..710862 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1575043694:710736..710862 | TCONS_00069212-exon-scaffold_496-1575043694:710736..710862 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1491911889:711091..711245 | TCONS_00069212-exon-scaffold_496-1491911889:711091..711245 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1510915933:711091..711245 | TCONS_00069212-exon-scaffold_496-1510915933:711091..711245 | Clytia hemisphaerica | exon |
| TCONS_00069212-exon-scaffold_496-1575043694:711091..711245 | TCONS_00069212-exon-scaffold_496-1575043694:711091..711245 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:698391..711245 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR024160 | BIN3_SAM-bd_dom |
| IPR029063 | SAM-dependent_MTases |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008168 |
methyltransferase activity |
Blast
BLAST of TCONS_00069212 vs. Swiss-Prot (Human)
Match: MEPCE (7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.538e-23 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 2
Query: 1325 IKGDYVPASQQSLESVQQEYETIVFLSTSKWIHLNYGDEGLKRTFKKIFFQLRPGGRLLFEPHTISCYKKSRNLTTGIRQTYDKMRFQPSDFITYLLSSEVGFKQSVCLAHTRKRKTNNLRPLYLLTK 1708
+ G+YV +E+ EY+ ++ LS +KW+HLN+GDEGLKR F++I+ LRPGG L+ EP S Y K + LT I + Y +++ +P F +YL S +VGF +A RP+YL K
Sbjct: 556 VTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQRPVYLFHK 683
The following BLAST results are available for this feature:
|
